Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2620
Parameters: 2 7 7 80 10 50 1000
Length:  37021

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
969--993
13
1.9
13
100
0
50
0
12
0
88
0.53
1326--1389
21
3.1
20
80
17
60
39
0
0
60
0.97
1325--1389
23
3.0
22
78
19
66
38
0
0
61
0.96
1559--1584
11
2.4
11
100
0
52
30
0
0
69
0.89
2555--2579
13
1.9
13
100
0
50
52
0
0
48
1.00
3552--3607
16
3.6
16
74
13
55
57
0
1
41
1.09
3571--3625
16
3.7
15
77
13
51
50
0
3
45
1.19
3581--3628
24
2.0
24
88
8
71
50
0
4
45
1.21
3630--3655
11
2.4
11
100
0
52
34
0
0
65
0.93
4184--4221
2
19.0
2
100
0
76
50
0
0
50
1.00
6633--6671
16
2.4
16
100
0
78
58
0
12
28
1.34
11463--11513
23
2.1
25
82
7
61
50
5
1
41
1.37
12050--12097
10
4.7
10
79
5
60
2
20
0
77
0.88
12056--12101
4
11.8
4
78
21
53
2
21
0
76
0.90
12056--12097
14
2.7
15
86
13
59
2
21
0
76
0.90
12040--12104
21
3.1
21
84
2
78
4
18
0
76
0.95
12069--12121
21
2.6
21
82
11
58
7
20
0
71
1.10
13366--13953
32
18.4
32
92
1
955
17
18
34
30
1.93
13950--14439
27
18.0
27
91
2
712
28
14
34
23
1.94
15822--15864
22
1.9
23
85
4
61
4
11
11
72
1.27
21702--21752
23
2.1
25
82
7
61
50
5
1
41
1.37
22290--22337
10
4.7
10
79
5
60
2
20
0
77
0.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22296--22341
4
11.8
4
78
21
53
2
21
0
76
0.90
22296--22337
14
2.7
15
86
13
59
2
21
0
76
0.90
22280--22344
21
3.1
21
84
2
78
4
18
0
76
0.95
22309--22361
21
2.6
21
82
11
58
7
20
0
71
1.10
25013--25046
12
2.8
12
90
4
50
0
14
0
85
0.60
26592--26665
19
3.6
19
73
19
76
48
21
5
24
1.71
34365--34389
1
25.0
1
100
0
50
100
0
0
0
0.00

Tables:   1

The End!