Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2626
Parameters: 2 7 7 80 10 50 1000
Length:  34844

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1847--1879
16
2.0
17
88
5
50
24
33
33
9
1.87
9330--9362
6
5.5
6
89
10
50
81
0
3
15
0.80
12326--12380
22
2.5
22
100
0
110
61
9
10
18
1.54
13291--13365
20
3.8
20
78
3
71
40
13
13
33
1.83
13288--13365
40
2.0
39
84
2
102
39
14
12
33
1.84
22223--22264
21
2.0
21
90
0
66
30
2
30
35
1.71
22960--22989
13
2.3
13
94
0
51
33
13
13
40
1.83
22944--23012
33
2.1
33
86
0
93
33
11
20
34
1.89
23900--23953
19
2.8
20
91
2
83
29
16
16
37
1.91
26661--26706
21
2.1
21
84
11
58
41
6
13
39
1.70
26825--26849
13
1.9
13
100
0
50
32
16
16
36
1.90
26950--26975
13
2.0
13
100
0
52
30
15
15
38
1.88
26930--26997
33
2.1
33
88
2
102
35
17
13
33
1.89
33008--33046
20
1.9
21
94
5
71
35
15
17
30
1.91
33308--33364
21
2.7
21
91
0
96
33
8
19
38
1.82
33420--33487
19
3.9
19
74
21
76
36
11
13
38
1.81
33422--33484
32
2.0
32
93
0
108
36
12
14
36
1.84
33527--33552
13
2.0
13
100
0
52
30
15
15
38
1.88
33507--33573
33
2.0
33
88
0
98
25
14
16
43
1.86

Tables:   1

The End!