Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2633
Parameters: 2 7 7 80 10 50 1000
Length:  21838

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
338--633
50
5.9
50
88
0
439
30
20
18
30
1.96
3359--3383
13
1.9
13
100
0
50
32
8
16
44
1.76
3969--4052
34
2.5
34
73
11
82
30
15
16
36
1.90
6391--6439
14
3.4
14
78
10
53
32
8
2
57
1.40
12489--12553
8
8.2
8
76
21
66
33
0
1
64
1.03
12481--12553
23
3.0
25
77
20
75
34
0
1
64
1.02
12483--12536
15
3.7
15
80
14
60
31
0
0
68
0.90
12478--12546
30
2.4
29
79
13
88
33
0
0
66
0.92
12589--12632
18
2.4
18
81
14
54
36
2
0
61
1.09
12480--12546
15
4.6
15
74
10
50
32
0
0
67
0.91
13046--13102
15
3.8
15
80
13
64
82
1
15
0
0.75
13046--13099
26
2.1
26
85
0
72
83
1
14
0
0.73
13046--13102
5
11.4
5
82
16
57
82
1
15
0
0.75
14159--14184
13
2.0
13
100
0
52
46
0
0
53
1.00
14570--14702
66
2.0
66
89
0
203
33
16
11
39
1.84
14801--14843
23
2.0
21
90
9
68
62
0
0
37
0.95
15770--15798
13
2.2
13
100
0
58
48
6
6
37
1.57
15979--16019
21
2.0
21
85
4
57
39
0
7
53
1.29
16354--16396
18
2.4
18
84
0
50
44
2
2
51
1.27
16583--16625
21
2.0
22
86
13
63
74
0
2
23
0.93
16836--16895
29
2.1
28
84
3
75
46
5
1
46
1.34
17028--17058
15
2.1
15
100
0
62
35
0
6
58
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17081--17144
19
3.4
18
76
19
69
67
4
1
26
1.19
17081--17163
19
4.6
18
70
21
57
65
3
2
28
1.22
17081--17163
36
2.3
37
87
2
114
65
3
2
28
1.22
18248--18297
19
2.6
19
78
12
66
60
0
2
38
1.09

Tables:   1

The End!