Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2646
Parameters: 2 7 7 80 10 50 1000
Length:  32602

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1094--1152
30
2.0
30
96
0
109
27
11
40
20
1.87
1339--1388
11
4.4
11
80
16
57
10
28
0
62
1.27
6299--6358
30
2.0
30
93
0
102
28
11
38
21
1.89
6561--6594
11
3.1
11
84
16
52
8
23
0
67
1.18
8184--8215
16
2.0
16
100
0
64
43
6
12
37
1.68
9463--9493
2
15.5
2
100
0
62
48
0
0
51
1.00
9616--9677
31
2.0
31
93
0
106
30
11
14
43
1.80
9617--9685
31
2.2
31
89
0
102
30
11
15
42
1.83
10841--10883
3
14.0
3
95
4
77
65
0
0
34
0.93
10879--10904
4
6.5
4
100
0
52
76
0
0
23
0.78
15335--15730
196
2.0
196
98
0
767
37
22
15
24
1.93
18509--18869
150
2.4
153
76
11
373
41
14
13
30
1.84
19485--19510
13
2.0
13
100
0
52
38
15
15
30
1.88
21726--21770
21
2.1
21
84
8
56
53
6
20
20
1.67
23285--24045
66
11.7
65
73
8
397
15
22
15
46
1.83
23434--23675
129
1.9
126
82
4
306
17
22
13
47
1.82
23453--24003
131
4.2
129
77
6
414
15
23
15
45
1.85
23449--24047
263
2.3
260
79
3
576
15
23
16
45
1.85
23714--24045
131
2.5
131
77
7
314
14
24
17
44
1.85
24047--24192
66
2.2
64
76
2
148
15
22
14
47
1.82
27495--27519
13
1.9
13
100
0
50
32
16
16
36
1.90
28187--28230
21
2.1
21
83
8
54
25
31
4
38
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30002--30027
13
2.0
13
100
0
52
38
15
15
30
1.88
32109--32139
16
1.9
16
93
0
53
12
22
12
51
1.74

Tables:   1

The End!