Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2653
Parameters: 2 7 7 80 10 50 1000
Length:  31434

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2818--2849
15
2.2
15
94
5
57
84
6
0
9
0.78
4456--4550
34
3.0
30
86
9
120
41
2
1
55
1.18
4456--4543
30
2.7
33
87
6
119
39
2
1
56
1.19
4465--4547
15
5.3
15
70
24
64
40
2
0
56
1.12
6530--6590
28
2.2
28
88
5
88
50
0
1
47
1.10
6589--6657
32
2.2
31
84
2
84
52
11
7
28
1.64
6597--6664
32
2.1
32
83
0
82
54
10
5
29
1.58
6746--6788
12
3.3
12
76
17
50
39
0
6
53
1.28
6731--6799
27
2.6
27
88
9
97
37
0
7
55
1.28
6716--6845
32
4.2
32
75
16
121
39
0
4
56
1.20
10061--10087
4
6.8
4
100
0
54
25
0
22
51
1.48
10714--10752
11
3.6
11
82
6
53
56
0
0
43
0.99
10714--10754
21
2.0
21
90
0
64
56
0
0
43
0.99
18669--19186
260
2.0
260
100
0
1036
34
20
14
30
1.93
21648--21684
16
2.3
16
100
0
74
62
5
10
21
1.48
28957--28984
2
14.0
2
100
0
56
50
0
50
0
1.00
29243--29296
27
1.9
28
81
7
65
51
1
1
44
1.22

Tables:   1

The End!