Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2660
Parameters: 2 7 7 80 10 50 1000
Length:  18410

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4976--5053
36
2.2
35
80
10
88
35
1
5
57
1.29
5005--5131
27
4.4
28
73
15
98
37
0
1
59
1.12
5092--5175
22
4.0
22
71
21
56
32
2
1
64
1.14
5086--5164
37
2.1
38
84
15
101
30
1
1
67
1.07
5083--5164
17
4.6
18
73
23
68
30
1
1
67
1.06
5086--5164
13
6.2
12
72
19
54
30
1
1
67
1.07
6616--6640
2
12.5
2
100
0
50
52
0
0
48
1.00
11308--11419
39
2.9
40
78
6
124
41
10
3
44
1.56
11276--11425
39
3.9
38
74
8
110
41
10
3
45
1.54
12980--13035
21
2.6
23
81
13
75
57
1
0
41
1.09
13152--13201
20
2.5
20
90
9
77
52
0
0
48
1.00
13385--13435
22
2.3
21
74
9
57
54
0
0
45
0.99
13405--13434
15
2.0
15
100
0
60
60
0
0
40
0.97
13529--13717
96
2.0
96
90
2
301
37
6
7
48
1.58
17999--18046
2
24.5
2
93
4
80
52
2
0
45
1.12

Tables:   1

The End!