Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2679
Parameters: 2 7 7 80 10 50 1000
Length:  14503

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8730--8782
20
2.7
20
85
2
72
32
16
15
35
1.90
8814--8876
33
1.9
32
84
12
83
34
15
15
33
1.90
10461--10515
3
18.3
3
92
0
92
32
0
36
30
1.58
11370--11422
23
2.3
23
90
0
79
5
13
22
58
1.56
11681--12027
68
5.0
69
87
2
502
7
25
10
55
1.60
12013--12093
42
1.9
42
92
0
135
4
22
6
66
1.33
12425--12558
14
9.9
14
73
18
95
44
8
20
25
1.80
12424--12543
29
4.4
27
72
18
88
45
10
20
25
1.81
12424--12561
52
2.5
57
82
12
198
45
9
20
24
1.80
12833--12880
17
2.8
17
74
0
51
18
2
6
72
1.15
13405--13970
42
13.5
41
67
9
228
34
19
27
18
1.95
13433--13970
84
6.4
84
77
5
469
34
19
27
18
1.95

Tables:   1

The End!