Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2684
Parameters: 2 7 7 80 10 50 1000
Length:  36530

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9292--9368
20
3.8
20
76
6
84
41
11
12
33
1.80
12413--12638
79
2.9
79
78
5
215
30
15
28
25
1.95
12532--12954
107
4.0
107
69
9
310
30
14
26
28
1.95
12683--12816
51
2.6
51
84
3
155
34
14
22
29
1.93
12539--12923
209
1.8
209
90
1
628
30
14
26
29
1.95
12827--13362
79
6.8
79
91
2
780
31
15
25
27
1.95
22033--22209
79
2.2
79
84
4
214
30
16
28
23
1.97
22154--22525
107
3.5
106
70
11
332
30
15
27
26
1.95
22220--22390
51
3.4
51
82
4
184
33
13
23
29
1.93
22116--22497
209
1.8
209
91
0
629
31
14
26
27
1.95
22401--23009
79
7.8
78
89
3
854
32
15
25
27
1.95
24404--24571
34
4.9
35
97
1
313
20
32
5
41
1.76
24434--24560
14
7.7
14
66
28
56
20
34
6
38
1.78
24577--24604
6
4.7
6
100
0
56
28
0
0
71
0.86
27245--27280
14
2.6
14
95
0
63
0
36
0
63
0.94
27243--27277
17
2.0
18
94
5
63
0
37
0
62
0.95
28396--28539
32
4.5
31
76
7
94
27
19
25
27
1.99
28566--28762
31
6.4
31
75
2
137
17
20
31
30
1.95
28556--28743
62
3.0
62
78
1
198
17
22
31
28
1.97
28584--28762
62
2.9
61
76
6
180
16
21
31
29
1.96
28823--28862
20
2.0
20
85
0
53
35
20
17
27
1.95
28843--29873
62
17.0
60
86
2
1122
27
19
25
27
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28843--29878
123
8.5
120
86
3
1136
27
19
25
27
1.99
29852--29933
29
2.7
31
74
14
89
23
19
26
30
1.98
28844--29934
183
6.0
181
78
7
892
27
19
25
27
1.99
31101--31169
20
3.3
20
75
20
70
11
8
4
75
1.17
33836--33866
11
2.9
11
95
4
55
80
19
0
0
0.71
34621--34704
19
4.6
19
67
21
63
38
16
15
29
1.90
34568--34704
53
2.6
53
91
3
213
38
17
16
27
1.91

Tables:   1

The End!