Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2687
Parameters: 2 7 7 80 10 50 1000
Length:  13897

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
897--931
3
12.0
3
93
6
63
34
0
0
65
0.93
1658--1703
3
15.3
3
100
0
92
32
0
0
67
0.91
2318--2371
26
2.1
26
82
6
65
55
0
0
44
0.99
3130--3170
14
3.2
13
83
13
50
60
0
4
34
1.18
3092--3163
29
2.5
29
73
8
67
58
2
2
36
1.27
3579--3712
11
12.5
11
67
20
70
60
5
0
32
1.26
3590--3717
30
4.1
30
68
20
91
60
5
0
33
1.25
3977--4025
23
2.1
23
85
7
64
38
0
2
59
1.09
3980--4017
19
2.0
20
85
15
53
36
0
2
60
1.11
4002--4068
25
2.8
24
77
18
68
47
0
2
49
1.16
4021--4068
24
1.9
25
87
8
71
45
0
2
52
1.12
4757--4803
23
2.0
23
83
8
58
48
0
0
51
1.00
6168--6231
25
2.4
27
79
7
69
35
0
1
62
1.05
6195--6250
27
2.2
25
83
6
67
35
1
0
62
1.06
8075--8138
22
3.0
21
77
18
71
56
0
0
43
0.99
8315--8409
5
19.0
5
75
18
83
58
0
1
40
1.05
9000--9061
11
5.9
11
79
11
67
32
3
0
64
1.09
9014--9057
15
3.0
14
81
12
52
27
2
0
70
0.99
8996--9062
20
3.3
21
85
6
95
31
2
0
65
1.07
9311--9335
4
6.2
4
100
0
50
0
76
0
24
0.80
10290--10393
30
3.5
30
83
0
145
35
8
23
32
1.85

Tables:   1

The End!