Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2688
Parameters: 2 7 7 80 10 50 1000
Length:  23552

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131--178
19
2.5
19
86
0
60
33
14
18
33
1.91
3244--3271
13
2.2
13
100
0
56
39
17
14
28
1.89
3226--3291
33
2.0
33
85
5
89
42
13
13
30
1.83
4398--4429
9
3.6
9
91
0
55
0
12
0
87
0.54
4397--4429
16
2.0
17
94
5
59
0
15
0
84
0.61
20172--20230
13
5.0
13
75
23
67
35
16
13
33
1.88
20156--20251
33
2.9
33
96
0
174
34
18
11
35
1.87
20185--20250
20
3.7
20
73
26
83
33
18
12
36
1.88
20280--20335
19
2.9
19
91
2
85
35
17
16
30
1.92
20320--20346
13
2.1
13
100
0
54
40
14
14
29
1.86
20301--20365
32
2.0
32
90
3
103
41
13
16
27
1.87

Tables:   1

The End!