Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2689
Parameters: 2 7 7 80 10 50 1000
Length:  37274

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7916--7961
22
2.1
22
84
8
58
63
4
4
28
1.33
9406--9443
2
20.0
2
84
10
53
50
2
0
47
1.15
9467--9530
33
1.9
33
83
0
83
34
21
14
29
1.93
12670--12699
1
30.0
1
100
0
60
100
0
0
0
0.00
13245--13292
24
2.0
24
88
4
71
56
16
12
14
1.68
15219--15261
21
2.0
21
95
0
77
48
0
2
48
1.14
15213--15260
21
2.5
18
75
18
51
50
2
2
45
1.25
15265--15304
21
1.9
21
85
10
55
45
0
0
55
0.99
15257--15330
29
2.6
28
81
16
89
47
1
0
51
1.09
15491--15524
16
2.1
17
94
5
61
47
0
0
52
1.00
20483--20631
72
2.1
72
93
0
253
22
16
17
42
1.88
22253--22278
13
2.0
13
100
0
52
30
15
15
38
1.88
22350--22404
20
2.8
20
88
5
76
30
14
14
40
1.86
26939--26979
15
2.7
15
84
3
55
17
19
17
46
1.85
31053--31078
13
2.0
13
100
0
52
30
15
15
38
1.88
31033--31097
33
2.0
33
87
6
96
27
13
16
41
1.87
31150--31204
20
2.8
20
88
5
76
30
14
14
40
1.86
32738--32809
36
2.0
36
100
0
144
55
16
5
22
1.62
33856--33886
3
10.3
3
100
0
62
32
0
0
67
0.91
36354--36386
17
1.9
17
93
0
57
51
6
0
42
1.26
36420--36457
13
2.9
14
84
7
53
34
0
0
65
0.93
36422--36491
14
4.6
15
75
13
63
37
0
0
62
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36431--36502
34
2.1
33
82
14
85
41
1
0
56
1.07

Tables:   1

The End!