Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2692
Parameters: 2 7 7 80 10 50 1000
Length:  25948

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2332--2364
11
2.8
12
86
9
50
48
0
0
51
1.00
2463--2513
18
2.6
19
84
12
68
43
15
3
37
1.66
6665--6960
155
1.9
153
80
6
346
37
19
15
28
1.92
7728--7770
21
2.0
21
82
8
52
46
13
4
34
1.65
7738--7778
19
2.0
22
86
13
61
46
9
4
39
1.58
8130--8260
66
2.0
67
89
1
201
31
19
23
25
1.98
9959--9992
17
2.0
17
100
0
68
82
0
5
11
0.83
9998--10054
21
2.7
21
97
0
105
33
10
19
36
1.86
10110--10177
19
3.9
19
78
21
85
35
11
14
38
1.83
10131--10155
13
1.9
13
100
0
50
36
16
16
32
1.90
10112--10174
32
2.0
32
96
0
117
34
12
15
36
1.86
10217--10242
13
2.0
13
100
0
52
30
15
15
38
1.88
10197--10263
33
2.0
33
88
0
98
25
14
16
43
1.86
12710--12785
27
2.8
28
86
6
93
26
34
18
21
1.96
12719--12785
28
2.4
27
87
7
91
26
35
14
22
1.93
12737--12915
79
2.3
79
99
0
349
27
26
14
30
1.95
12849--13017
51
3.3
51
80
4
203
30
26
10
33
1.89
13000--13081
28
2.9
28
80
7
87
25
31
15
26
1.96
25468--25512
12
3.4
13
90
9
65
91
6
2
0
0.50
25468--25503
1
36.0
1
88
0
54
94
5
0
0
0.31

Tables:   1

The End!