Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2699
Parameters: 2 7 7 80 10 50 1000
Length:  36295

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
145--212
19
3.9
18
76
23
83
35
11
16
36
1.85
166--190
13
1.9
13
100
0
50
36
16
16
32
1.90
147--209
32
2.0
32
96
0
117
34
12
17
34
1.88
252--276
13
1.9
13
100
0
50
32
16
16
36
1.90
232--299
35
2.0
33
88
5
100
26
16
13
44
1.84
2733--2807
27
2.7
28
89
2
107
24
34
20
21
1.96
2838--3011
52
3.4
50
75
10
172
30
27
11
31
1.92
15626--15709
1
84.0
1
73
0
69
86
10
2
0
0.65
15626--15709
11
7.5
11
82
12
93
86
10
2
0
0.65
15626--15709
33
2.5
32
86
11
107
86
10
2
0
0.65
15626--15709
12
6.7
12
81
10
89
86
10
2
0
0.65
16678--17448
55
13.3
59
86
5
854
25
27
21
26
1.99
16674--17449
171
4.5
173
85
5
904
25
26
21
26
1.99
17233--17374
29
5.1
29
61
19
77
28
29
19
22
1.98
18278--18345
19
3.9
18
76
23
83
35
11
16
36
1.85
18299--18323
13
1.9
13
100
0
50
36
16
16
32
1.90
18280--18342
32
2.0
32
96
0
117
34
12
17
34
1.88
18385--18410
13
2.0
13
100
0
52
30
15
15
38
1.88
18365--18431
34
2.0
33
91
2
107
25
16
13
44
1.84
20876--20946
27
2.6
27
84
13
92
25
33
19
21
1.97
20931--21152
51
4.3
51
76
10
173
29
25
12
32
1.92
23362--23415
20
2.7
20
94
0
99
40
12
11
35
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23715--24038
79
4.1
78
80
7
268
33
14
24
27
1.94
24002--24070
28
2.5
28
85
4
86
28
18
27
24
1.98
24053--24169
51
2.3
51
83
7
157
30
11
23
33
1.91
27155--27476
41
7.6
41
73
8
216
40
13
24
21
1.88
27210--27476
86
3.1
86
80
4
317
43
12
24
19
1.86
27486--28116
61
10.5
59
78
10
541
28
18
27
25
1.98
27480--28116
183
3.5
178
82
7
720
29
18
27
25
1.98
31323--31358
9
4.0
9
88
0
54
19
30
36
13
1.91
31536--31687
39
3.7
39
70
17
126
28
24
19
27
1.99
31498--31737
87
2.7
87
89
0
363
27
24
18
29
1.98
31654--32128
49
9.6
49
81
5
492
24
26
16
32
1.96
31654--32032
97
3.8
98
85
2
501
25
27
16
31
1.96
31654--32038
146
2.6
147
87
1
538
24
27
16
31
1.96
32042--32137
47
2.1
46
86
2
129
19
27
16
36
1.93
32941--33003
33
1.9
33
87
6
92
33
17
11
38
1.85

Tables:   1

The End!