Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2701
Parameters: 2 7 7 80 10 50 1000
Length:  8249

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1697--1743
20
2.3
20
85
10
69
31
10
10
46
1.73
1798--1846
20
2.4
21
89
6
82
24
18
12
44
1.84
2632--3389
52
14.7
52
73
7
231
37
16
21
24
1.94
3190--3383
105
1.8
105
80
0
235
37
16
21
24
1.93
3503--3641
31
4.4
32
84
5
201
22
17
30
29
1.96
3516--3636
64
1.9
64
91
3
199
23
19
28
28
1.98
3666--3775
34
3.3
33
81
6
123
42
13
28
15
1.85
3666--3785
33
3.6
33
78
8
118
40
12
29
17
1.86
3760--4216
33
14.7
32
71
17
227
36
12
29
21
1.90
3854--4019
60
2.7
59
84
4
197
39
13
25
20
1.90
3763--4103
121
2.8
119
77
10
339
35
13
29
21
1.92
3763--4103
61
5.6
61
79
8
282
35
13
29
21
1.92
3689--4210
33
16.6
33
70
16
163
37
12
28
21
1.90
5620--5696
23
3.2
24
73
12
68
5
10
7
76
1.14

Tables:   1

The End!