Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2705
Parameters: 2 7 7 80 10 50 1000
Length:  26527

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1146--1215
31
2.3
29
85
9
86
47
0
0
52
1.00
1146--1239
14
6.5
15
76
22
87
46
0
0
53
1.00
1170--1235
20
3.3
20
73
14
64
45
0
0
54
0.99
1145--1240
24
3.4
27
77
16
72
47
0
0
52
1.00
1511--1553
21
2.0
21
90
0
68
41
0
0
58
0.98
1525--1565
20
2.0
21
85
4
57
43
0
0
56
0.99
1519--1595
28
2.6
29
87
8
111
46
0
0
53
1.00
1569--1647
23
3.7
22
77
11
58
51
3
1
43
1.27
1549--1613
28
2.4
28
82
7
71
52
3
0
44
1.16
1581--1674
22
4.2
23
81
6
95
56
4
1
38
1.26
1607--1669
12
5.6
11
76
14
58
55
3
1
39
1.25
1775--1812
13
2.9
13
92
0
58
52
13
0
34
1.40
3772--3896
29
4.5
30
73
20
94
37
0
0
62
0.96
3802--3844
18
2.3
19
80
11
54
34
0
0
65
0.93
3813--3904
18
5.1
18
66
18
57
42
1
0
56
1.06
3807--3882
27
2.8
27
82
6
91
44
0
0
55
0.99
5625--5663
18
2.2
18
90
0
60
71
2
2
23
1.10
6089--6128
2
20.0
2
100
0
80
50
0
0
50
1.00
8427--8469
20
2.2
20
82
0
50
58
4
0
37
1.19
12684--12729
16
2.8
16
86
3
56
32
0
8
58
1.28
13765--13793
14
2.0
15
93
6
51
0
3
20
75
0.94
15325--15422
48
2.1
47
90
5
153
27
25
8
38
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16286--16327
21
1.9
23
85
9
61
47
0
2
50
1.14
16286--16338
21
2.4
23
78
12
58
49
0
3
47
1.19
16309--16377
29
2.4
29
75
22
74
55
0
1
43
1.08
16321--16384
30
2.1
29
86
11
85
56
0
1
42
1.09
16321--16384
13
4.2
16
77
18
75
56
0
1
42
1.09
16329--16392
14
4.5
15
81
14
73
57
0
0
42
0.98
20771--20804
18
1.9
17
88
5
50
38
0
0
61
0.96
21237--21264
7
4.0
7
100
0
56
71
0
0
28
0.86
21777--21820
13
3.5
13
84
3
63
43
0
0
56
0.99
23192--23222
6
5.2
6
100
0
62
0
51
0
48
1.00
24360--24391
2
16.0
2
100
0
64
50
0
0
50
1.00
24882--24928
14
3.3
14
77
22
53
57
0
0
42
0.98
25815--25843
14
2.0
15
93
6
51
48
10
0
41
1.37

Tables:   1

The End!