Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2707
Parameters: 2 7 7 80 10 50 1000
Length:  17368

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
279--339
26
2.2
26
85
11
77
42
1
0
55
1.09
298--363
33
2.0
32
83
13
82
43
0
0
56
0.99
317--364
16
3.1
16
74
14
55
41
0
0
58
0.98
8452--8513
30
2.1
29
84
3
79
35
22
6
35
1.80
16709--16786
21
3.5
23
66
26
60
50
0
1
48
1.09
16754--16805
25
2.0
26
85
7
70
42
0
0
57
0.98
16860--16912
23
2.3
23
80
6
63
33
9
0
56
1.32
16945--16995
15
3.5
15
75
20
54
37
0
1
60
1.08
16942--17004
28
2.2
29
81
13
78
39
1
1
57
1.18

Tables:   1

The End!