Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2708
Parameters: 2 7 7 80 10 50 1000
Length:  25552

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79--139
19
3.0
20
86
11
81
29
1
0
68
0.99
80--137
27
2.1
28
83
3
73
31
1
0
67
1.01
86--169
11
7.8
11
69
25
56
29
1
1
67
1.05
204--237
17
2.0
17
94
0
59
38
8
0
52
1.33
2925--2972
24
2.0
24
88
8
71
50
2
0
47
1.12
2954--3014
15
3.8
15
83
16
70
44
0
0
55
0.99
2927--3008
31
2.5
33
80
11
98
46
1
0
52
1.08
2959--3018
24
2.5
26
78
13
74
43
0
0
56
0.99
3377--3411
3
11.7
3
93
0
61
65
0
2
31
1.07
7621--7750
54
2.4
55
89
3
192
40
29
10
20
1.86
15090--15165
36
2.1
36
87
0
107
22
11
30
35
1.90
19993--20059
2
33.5
2
100
0
134
49
0
0
50
1.00
20590--20631
16
2.5
17
80
7
50
61
2
0
35
1.09

Tables:   1

The End!