Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2710
Parameters: 2 7 7 80 10 50 1000
Length:  69139

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
826--925
15
6.7
15
67
21
57
43
0
3
54
1.16
819--878
27
2.2
27
90
0
93
41
0
1
56
1.09
811--902
42
2.2
42
78
7
98
40
0
2
57
1.11
1347--1395
18
2.7
18
78
12
55
51
2
0
46
1.12
3537--3582
12
3.6
12
78
16
56
39
13
4
43
1.63
20917--21076
63
2.5
63
97
2
304
31
18
19
31
1.95
32985--33070
19
4.8
18
75
23
76
33
12
16
37
1.87
33027--33051
13
1.9
13
100
0
50
36
16
16
32
1.90
33008--33078
32
2.2
32
97
0
133
32
12
18
36
1.88
39704--39904
52
3.9
52
95
1
341
29
17
19
33
1.95
39893--39917
13
1.9
13
100
0
50
36
16
16
32
1.90
39980--40004
13
1.9
13
100
0
50
32
16
16
36
1.90
40062--40103
21
2.0
21
90
0
66
35
14
14
35
1.86
40889--41047
52
3.2
52
76
16
192
33
16
25
24
1.96
40943--41032
43
2.1
43
91
0
144
30
17
25
26
1.98
41038--41295
88
3.0
87
90
5
380
21
17
29
31
1.96
41038--41510
59
8.0
59
75
11
339
24
16
28
29
1.97
41368--41515
29
5.1
27
79
11
98
23
18
29
28
1.98
41217--41501
121
2.4
118
81
4
331
27
16
29
27
1.97
41036--41510
30
16.1
30
78
10
374
25
16
29
29
1.97
42948--43093
1
146.0
1
79
0
121
2
3
7
86
0.74
42948--43093
22
6.9
20
78
16
134
2
3
7
86
0.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42948--43093
33
4.5
32
78
3
139
2
3
7
86
0.74
67094--67193
1
100.0
1
81
0
119
91
9
0
0
0.44
67094--67193
19
5.4
18
87
9
132
91
9
0
0
0.44
67094--67193
40
2.5
40
90
1
148
91
9
0
0
0.44
68629--69074
27
15.8
28
73
16
239
30
29
17
23
1.97
68623--68762
29
4.9
27
83
7
109
28
29
19
22
1.98
68629--68798
57
2.9
56
76
12
148
27
29
18
25
1.98
68832--69046
85
2.6
82
87
9
310
33
28
17
20
1.95

Tables:   1

The End!