Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2711
Parameters: 2 7 7 80 10 50 1000
Length:  29356

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3989--4040
15
3.4
15
81
5
68
51
3
1
42
1.31
4476--4514
17
2.1
17
86
13
51
41
0
0
58
0.98
8119--8177
28
2.1
29
83
3
75
33
1
1
62
1.15
8314--8352
20
2.0
20
90
10
62
41
0
0
58
0.98
8382--8433
15
3.5
15
72
15
54
63
1
0
34
1.06
8373--8431
29
2.0
30
86
3
84
61
1
0
37
1.07
9344--9379
3
12.0
3
100
0
72
66
0
0
33
0.92
10635--10668
2
17.0
2
100
0
68
50
0
0
50
1.00
11130--11178
5
9.6
5
82
12
64
38
2
2
57
1.22
11314--11358
23
2.0
23
86
8
65
48
0
4
46
1.22
12270--12303
2
17.0
2
100
0
68
50
0
0
50
1.00
17620--17674
28
2.0
28
96
0
101
36
25
10
27
1.89
18218--18283
13
5.1
12
72
20
53
80
0
16
3
0.84
18218--18283
26
2.5
24
79
15
69
80
0
16
3
0.84
18225--18282
11
5.5
11
78
15
52
82
0
13
3
0.79
18224--18283
21
2.8
21
82
12
77
81
0
15
3
0.81
18226--18291
26
2.6
25
76
9
71
80
0
15
4
0.87
27913--28041
52
2.5
52
93
0
231
29
18
17
34
1.94
28117--28214
19
5.8
18
71
28
90
36
17
11
34
1.85
28112--28212
32
3.1
32
95
1
175
35
17
10
35
1.85
28136--28192
13
3.9
13
74
24
51
33
17
12
36
1.87

Tables:   1

The End!