Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2719
Parameters: 2 7 7 80 10 50 1000
Length:  56335

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11627--11700
28
2.6
28
85
10
98
22
18
33
24
1.97
11687--11794
52
2.1
52
84
3
137
31
9
27
31
1.88
11986--12015
11
2.6
12
94
5
53
0
0
13
86
0.57
12549--12574
13
2.0
13
100
0
52
38
15
15
30
1.88
12528--12594
33
2.0
33
88
0
98
43
16
14
25
1.86
12647--12683
16
2.3
16
100
0
74
40
5
10
43
1.63
16012--16048
13
2.8
13
100
0
74
37
16
16
29
1.90
16099--16152
21
2.7
19
75
8
63
31
16
11
40
1.84
20776--20858
41
2.0
41
90
0
130
31
20
12
36
1.89
25749--25777
2
15.0
2
92
7
51
48
0
0
51
1.00
26893--26934
21
2.0
21
90
0
66
42
2
2
52
1.27
27064--27130
24
2.6
25
82
13
75
41
2
1
53
1.25
33684--34122
229
1.9
228
91
1
718
51
6
17
25
1.68
36515--36588
20
3.8
20
85
3
105
33
14
14
36
1.88
44586--44659
20
3.8
19
82
8
78
37
16
13
32
1.87
45859--45884
11
2.4
11
100
0
52
69
7
0
23
1.14
49503--49549
21
2.2
22
84
3
60
55
4
17
23
1.59
51351--51381
15
2.1
15
93
0
53
48
16
22
12
1.80
53458--53496
13
3.0
13
100
0
78
30
15
15
38
1.88
56043--56068
13
2.0
13
100
0
52
38
15
15
30
1.88

Tables:   1

The End!