Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2723
Parameters: 2 7 7 80 10 50 1000
Length:  62340

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
176--210
12
2.9
12
84
16
54
40
0
0
60
0.97
629--688
22
2.6
24
78
10
79
50
6
5
38
1.51
1344--1407
9
6.9
9
72
18
51
59
1
1
37
1.16
1950--2002
21
2.5
20
82
14
63
56
0
1
41
1.10
2228--2376
58
2.5
63
77
20
174
53
0
0
44
1.10
2230--2306
21
3.7
21
67
10
59
54
0
0
45
0.99
2243--2407
27
5.6
29
76
17
146
53
0
1
44
1.12
2235--2365
56
2.4
51
82
15
149
52
0
0
45
1.11
2288--2433
64
2.3
63
81
11
170
56
0
1
41
1.12
2340--2404
28
2.2
30
84
10
82
55
0
1
43
1.09
2352--2423
28
2.5
28
76
14
76
56
0
1
41
1.07
2253--2423
31
5.7
29
71
19
120
53
0
1
44
1.12
2330--2450
64
1.9
64
81
10
149
59
0
0
39
1.03
3981--4029
25
1.9
25
83
4
62
55
2
8
34
1.41
7438--7527
45
2.0
44
97
2
171
33
11
17
37
1.85
9214--9251
2
19.0
2
94
0
67
52
0
0
47
1.00
11553--11584
17
1.9
16
93
6
55
21
0
0
78
0.76
15665--15717
16
3.1
16
80
17
54
64
1
0
33
1.05
22136--22201
26
2.5
27
78
9
73
57
0
1
40
1.08
22151--22205
25
2.1
25
83
10
65
58
0
1
40
1.09
25846--25876
2
16.0
2
93
6
55
51
0
0
48
1.00
25916--25964
13
3.9
13
79
12
50
46
0
0
53
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25956--26027
36
1.9
39
81
13
89
44
0
5
50
1.25
37930--37984
21
2.5
22
80
8
60
47
0
1
50
1.11
40494--40537
2
22.0
2
100
0
88
0
50
0
50
1.00
41216--41277
25
2.5
24
72
25
58
50
0
0
50
1.00
41216--41279
24
2.6
26
72
16
64
50
0
0
50
1.00
41224--41305
25
3.1
25
70
24
62
51
0
0
48
1.00
48189--48277
30
2.9
30
83
9
92
46
2
2
49
1.26
50132--50161
15
2.0
15
100
0
60
53
20
0
26
1.46
53770--53873
37
2.8
38
72
22
96
50
0
0
48
1.07
53934--53991
16
3.4
18
71
22
54
53
3
0
43
1.17
53927--54036
38
2.9
38
71
14
102
54
1
0
43
1.10
53966--54046
20
3.9
20
74
16
58
56
1
0
41
1.07
54531--54590
14
4.6
13
71
21
54
35
0
0
65
0.93
54540--54590
18
2.7
19
78
9
59
33
0
0
66
0.92
54559--54594
18
2.1
17
89
5
54
41
0
0
58
0.98
62273--62305
17
2.0
17
94
5
59
63
0
0
36
0.95

Tables:   1

The End!