Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2724
Parameters: 2 7 7 80 10 50 1000
Length:  46148

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1066--1106
2
20.5
2
94
0
73
53
0
0
46
1.00
8706--8748
2
21.5
2
95
0
77
46
0
0
53
1.00
13687--13935
59
4.3
57
79
9
229
27
12
16
43
1.84
13742--13875
30
4.7
30
71
19
90
26
9
17
46
1.79
13709--13822
30
3.9
29
72
16
83
27
12
17
42
1.85
13801--13849
24
2.1
24
88
11
75
28
12
18
40
1.86
13712--13924
113
1.9
112
83
4
277
28
13
15
42
1.84
13771--13924
54
2.8
54
80
5
148
29
12
14
43
1.82
13832--13917
29
3.0
29
70
16
79
31
15
11
41
1.82
13945--14183
49
4.9
49
76
6
173
33
13
12
40
1.83
13947--14183
96
2.4
98
77
3
230
32
13
13
40
1.83
18508--19003
156
3.2
155
82
4
574
37
20
17
24
1.93
20259--20336
20
3.9
20
93
5
131
30
10
16
42
1.82
20392--20447
21
2.7
21
80
2
60
37
12
8
41
1.74
22395--22550
78
2.0
78
100
0
312
30
6
39
23
1.79
27029--27260
98
2.4
98
95
0
410
32
14
27
25
1.94
29408--29582
90
1.9
91
89
3
273
44
10
14
30
1.79
29456--29582
20
5.8
20
73
17
110
43
10
15
30
1.80
30574--30993
28
14.9
27
82
6
383
23
17
30
28
1.97
30574--30984
56
7.2
56
86
3
536
22
17
30
28
1.97
30574--30984
84
4.8
84
84
5
522
22
17
30
28
1.97

Tables:   1

The End!