Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2735
Parameters: 2 7 7 80 10 50 1000
Length:  74816

Tables:   1   

This is table  1  of  1  ( 78 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
184--241
29
2.0
29
83
6
73
46
0
1
51
1.11
519--563
19
2.5
18
79
10
56
51
0
2
46
1.13
662--713
21
2.5
20
85
11
70
34
0
3
61
1.14
1153--1210
21
2.7
22
71
5
57
46
0
0
53
1.00
1162--1233
28
2.6
27
80
10
76
50
0
0
50
1.00
4165--4219
16
3.6
16
80
9
78
54
5
3
36
1.41
4160--4221
30
2.1
30
100
0
124
51
8
3
37
1.48
5621--5650
3
10.0
3
100
0
60
33
0
0
66
0.92
6425--6457
15
2.2
15
94
0
57
48
0
0
51
1.00
6399--6542
8
16.0
9
64
24
56
45
1
0
52
1.14
6648--6694
5
10.2
5
86
13
66
34
0
0
65
0.93
6648--6696
17
2.7
20
87
12
70
34
0
0
65
0.93
7001--7060
16
3.5
17
76
12
61
53
0
0
46
1.00
8345--8406
21
2.8
22
76
11
65
51
0
0
48
1.00
13174--13213
21
1.9
21
90
10
64
60
0
0
40
0.97
13797--13868
30
2.4
28
77
13
72
55
0
0
44
0.99
15227--15255
2
15.0
2
92
7
51
51
0
0
48
1.00
21792--21830
20
2.0
20
89
0
60
28
0
2
69
1.02
22908--22969
12
5.4
12
73
11
58
22
1
3
72
1.08
24184--24217
15
2.1
17
89
10
54
55
0
0
44
0.99
24596--24641
19
2.5
17
83
16
56
56
0
0
43
0.99
25204--25279
30
2.5
31
87
8
102
63
0
1
35
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25199--25279
11
7.6
11
82
8
89
62
0
1
35
1.03
25229--25307
24
3.4
23
77
16
74
59
0
0
40
0.97
25261--25354
17
5.9
17
67
21
53
56
0
0
43
0.99
25288--25343
20
2.9
20
72
15
55
53
0
0
46
1.00
26868--26901
13
2.6
13
86
13
52
55
0
0
44
0.99
26863--26901
13
3.1
12
82
13
51
56
0
0
43
0.99
27668--27754
30
3.0
28
74
15
79
40
10
3
45
1.55
28050--28127
21
3.5
22
72
16
72
57
0
0
42
0.98
28407--28455
17
2.9
17
96
0
89
34
0
0
65
0.93
35363--35416
23
2.3
23
84
9
65
64
0
0
35
0.94
35385--35482
11
8.2
12
68
27
50
56
1
1
41
1.13
35447--35493
20
2.3
20
92
7
78
51
0
0
48
1.00
35384--35529
40
3.8
38
72
17
99
55
0
0
43
1.09
35435--35532
10
10.1
10
67
24
59
54
0
0
45
1.00
35909--35943
16
2.2
16
89
0
52
77
0
2
20
0.90
36586--36705
48
2.7
43
73
17
109
54
0
0
45
1.06
37450--37545
9
11.0
9
67
20
53
39
0
1
59
1.04
37504--37570
24
2.6
26
79
11
75
41
0
0
58
0.98
37517--37570
24
2.2
25
87
6
76
38
0
0
61
0.96
37476--37572
40
2.3
42
82
12
119
40
0
0
59
0.97
39516--39580
29
2.2
29
83
5
78
46
0
0
53
1.00
40013--40051
2
20.0
2
94
5
71
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40244--40301
13
4.7
13
71
16
52
29
0
1
68
0.99
40641--40665
2
12.5
2
100
0
50
48
0
0
52
1.00
42257--42293
17
2.1
19
90
10
60
51
8
0
40
1.32
43205--43255
15
3.4
15
77
0
57
49
0
0
50
1.00
43370--43429
16
3.6
18
72
22
58
45
0
0
55
0.99
43373--43423
15
3.2
15
74
20
50
43
0
0
56
0.99
44647--44704
30
1.9
30
83
13
75
50
1
1
46
1.22
44686--44786
33
2.9
36
75
14
104
45
1
0
51
1.19
44718--44797
33
2.4
33
91
0
133
47
0
1
51
1.08
44823--44908
31
2.7
33
74
17
90
40
0
1
58
1.06
46454--46491
18
2.1
19
85
5
51
23
0
2
73
0.95
46483--46530
19
2.5
18
83
12
60
45
0
2
52
1.12
48386--48424
19
2.0
20
85
5
53
43
0
2
53
1.14
50782--50818
6
6.5
6
87
9
51
89
0
10
0
0.49
50782--50818
17
2.2
17
90
0
56
89
0
10
0
0.49
52042--52094
23
2.3
24
78
15
58
58
0
0
41
0.98
52226--52271
23
2.0
23
87
12
67
60
2
2
34
1.21
58719--58753
6
5.8
6
90
10
54
62
2
0
34
1.10
58719--58753
11
2.9
12
91
8
54
62
2
0
34
1.10
58807--58837
13
2.4
13
100
0
62
58
0
0
41
0.98
60542--60601
21
3.0
20
87
7
77
61
0
0
38
0.96
61897--61934
20
1.9
20
88
0
58
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62906--62943
3
12.7
3
100
0
76
65
0
0
34
0.93
63521--63558
15
2.4
16
82
8
51
36
13
7
42
1.73
63717--63759
16
2.7
15
86
10
59
48
2
2
46
1.27
63718--63825
56
1.9
55
83
9
139
48
2
1
47
1.27
63790--63823
17
2.0
17
88
0
50
52
0
0
47
1.00
64332--64384
3
17.7
3
100
0
106
32
0
0
67
0.91
64976--65008
13
2.3
15
90
10
52
36
0
0
63
0.95
65694--65761
13
5.0
13
75
20
59
41
0
1
57
1.08
66611--66637
3
9.0
3
100
0
54
33
66
0
0
0.92
67075--67105
2
15.5
2
93
0
53
48
0
3
48
1.17
71278--71345
35
2.0
35
83
13
88
41
2
0
55
1.15
71281--71372
39
2.5
37
79
13
91
39
2
1
57
1.18

Tables:   1

The End!