Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold2738
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 15089
ACGTcount: A:0.37, C:0.16, G:0.18, T:0.29
Found at i:1468 original size:157 final size:153
Alignment explanation
Indices: 1306--2033 Score: 348
Period size: 159 Copynumber: 4.6 Consensus size: 153
1296 TAGAATCCTC
1306 ATTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTGACAGGAAACCCTTTCTTAC
1 ATTTGTCTCATTTGAGGCACGAACTT-GACTTTACAAAAA-TGGTGACAGGAAACCCTTTCTTAC
1371 GAAACCAAAGAATCAATATCGTGTATCCTGATGAGAAGACAAAGTGATGGTGCCTAATCATGAAA
64 GAAACCAAAGAATCAATATCGTGTATCCT-ATGAGAAGACAAAGTGATGGTGCCTAATCATGAAA
1436 AGAATGGGGT-TTAGCATGACAATTCTT
128 AGAATGGGGTCTTAGC-TGACAA-TCTT
* * * **
1463 ATTTGTCTTATTTAAGAGGCA--AACTCTTACTTCTATCAAAAACGGTGGA-A-GAAACATTTTC
1 ATTTGTCTCATTT--GAGGCACGAACT-TGACTT-TA-CAAAAATGGT-GACAGGAAACCCTTTC
* * * * * * ** * * **
1524 TTGCGACACCAAAGCATCAATGTCATGTATCCTAAG-GAAGGGAATGTGTTCTTAGCTCCTAATC
60 TTACGAAACCAAAGAATCAATATCGTGTATCCTATGAGAAGACAAAGTGATGGT-G--CCTAATC
* * *
1588 -TCGAAAAGAATGGAGACTCTTAG--GAGAATC-G
122 AT-GAAAAGAATGG-G-GTCTTAGCTGACAATCTT
* ** * * * **
1619 ATGGTTGTCATAATTAT-A-ATATGAATCTTGA-TATTA-AGGAAAATAGTG-CAAAGAAAAGCT
1 AT--TTGTC-TCATT-TGAGGCACGAA-CTTGACT-TTACA--AAAATGGTGAC-AGGAAACCCT
* * * ** ** * * * * * *
1679 TTCCATGCAAAAGAAAATCATGAATATCGTTTATCCTA-AAGAAGAGAATGTGTTTTATAGTGCC
57 TT-CTTACGAAACCAAAGAATCAATATCGTGTATCCTATGAGAAGACAAAGTG----ATGGTGCC
** * * * *
1743 TAATCACAAAAAGAATGAAGATCATTA-CT-AGAATCAT
117 TAATCATGAAAAGAATG-GGGTC-TTAGCTGACAATCTT
*
1780 CTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTGACAGGAAACCCTTTCTTAC
1 ATTTGTCTCATTTGAGGCACGAACTT-GACTTTACAAAAA-TGGTGACAGGAAACCCTTTCTTAC
1845 GAAACCAAAGAATCAATATCGTGTATCCTGATGAGAAGACAAAGTTGATGGTGCCTAATCATG-A
64 GAAACCAAAGAATCAATATCGTGTATCCT-ATGAGAAGACAAAG-TGATGGTGCCTAATCATGAA
* *
1909 AAGAATGTGG-ATTAGCATGACAATTCTT
127 AAGAATGGGGTCTTAGC-TGACAA-TCTT
* * * * * **
1937 ATTTGTCTTATTTAAGAGGCA--AACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCT
1 ATTTGTCTCATTT--GAGGCACGAACTTGACTT-TA-CAAAAATGGT-GACAGGAAACCCTTTCT
* * * *
2000 TGCGACAACCAAAGCATCAATGTCATGTATCCTA
61 TACGA-AACCAAAGAATCAATATCGTGTATCCTA
2034 AGAAGGGAAT
Statistics
Matches: 423, Mismatches: 90, Indels: 115
0.67 0.14 0.18
Matches are distributed among these distances:
153 3 0.01
154 1 0.00
155 14 0.03
156 22 0.05
157 109 0.26
158 107 0.25
159 117 0.28
160 40 0.09
161 7 0.02
162 1 0.00
163 2 0.00
ACGTcount: A:0.36, C:0.16, G:0.18, T:0.29
Consensus pattern (153 bp):
ATTTGTCTCATTTGAGGCACGAACTTGACTTTACAAAAATGGTGACAGGAAACCCTTTCTTACGA
AACCAAAGAATCAATATCGTGTATCCTATGAGAAGACAAAGTGATGGTGCCTAATCATGAAAAGA
ATGGGGTCTTAGCTGACAATCTT
Found at i:4310 original size:475 final size:476
Alignment explanation
Indices: 7--15089 Score: 22217
Period size: 475 Copynumber: 31.7 Consensus size: 476
1 AAATTT
* *
7 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATACTTTTTTGTCTTA-TTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* * *
71 CAAACTTT-CATCTATC-AAATCTGGTGGGAAGAAAACATTTTCTTGCGACACCAAAGCATCAAT
66 CAAACTTTACTTCTATCAAAAAC-GGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAAT
*
134 GTCATGTTTCCTAATGAAGGGAATGTGTTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTT
130 GTCATGTATCCTAATGAAGGGAATGTG-TTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTT
* * *** * * *
199 AGGAGAATCTATGCTTTTCATAATTATAATATGAA-TTTGATATTAAGGAAAATAGCGCAAAGAA
194 AGGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAATAA
263 AAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCT-AA-AGGAGAATGTGTTTATAGT
259 AAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGT
* * *
326 GCCTAATCACAAAAAG-A-GAAGATCA-TACTAGAA-CCTTAATTGTCTCATTTAGGAGGCAGGA
324 GCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTT--GAGGCACGA
* * * *
387 ACTTAGACTTTACAAAAATTGGTGACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATATCAT
387 ACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGT
* *
452 GTATCTTTATGAGAAGACAAAGTTT
452 GTATCCTTATGAGAAGACAAAGTTG
477 ATGGTGCCTAATCATGAAAAGAAT--GGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
*
540 CAAACTTTACTTCTATC-AAAACGGTGGAAAGAAAACATTTTCTTACGACACC-AAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * *
603 TCATGTATCCTAACGAAGGGAATGTGTTCTTAGCTCCTAATCTTGAAAAGAATGGAGA-TCTTAG
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
* * *
667 G-GAATCGATGGTTGTCATAATTATGGGATAAATTTTGATATTAAGGAAAAAAGGGAAAAT-AAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAATAAAA
* * ** *
730 GATTTCCATGCAAAAGAAAATCGTGAATATCATTTATCCTAAAAAGGAGAATGTGTTTATCTTAC
261 GATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTGC
* * * *
795 CTAATCACAAAAAGAATGAAGATAATTACTAGGATCCTCACTTGTCTTATTTGAGGCACGAACTT
326 CTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACTT
*
860 AGATTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
391 AGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
*
925 CCTTATGAGAAAACAAAGTTG
456 CCTTATGAGAAGACAAAGTTG
* * * * ***
946 ATGGAGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCATGCCTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* *
1011 CAAACTTTACTTCTATCAAAAATGGTGGAAAG-AAACATTTTCTTGTGACACCAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * *
1075 -CATGTTTCCTAATGAACGGAATGTGTTCTTAGCTCCCAATCTCGAAATGAATGGAGACTCTTAG
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
*
1139 GAGAATCGATGCTTGTCATAATTATGGTATGAATTTTGATATTAAGGAAAAAA-GGCGAAATAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGC-AAATAAA
1203 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAA--TGTTTATAGTG
260 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTG
*
1266 CCTAATCACAAGAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACT
325 CCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACT
* *
1331 TAGACTTTACAAAAATTGGTGACAGGAAACCCTTTCTTACGAAACCAAAGAATCAATATCGTGTA
390 TAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTA
*
1396 TCCTGATGAGAAGACAAAG-TG
455 TCCTTATGAGAAGACAAAGTTG
* *
1417 ATGGTGCCTAATCATGAAAAGAATGGGGTTTAGCATGACAATTCTTATTTGTCTTATTTAAGAGG
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
1482 CAAACTCTTACTTCTATCAAAAACGGTGG-AAG-AAACATTTTCTTGCGACACCAAAGCATCAAT
66 CAAACT-TTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAAT
* *
1545 GTCATGTATCCTAAGGAAGGGAATGTGTTCTTAGCTCCTAATCTCGAAAAGAATGGAGACTCTTA
130 GTCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTA
* *** * * * *
1610 GGAGAATCGATGGTTGTCATAATTATAATATGAATCTTGATATTAAGGAAAATAGTGCAAAGAAA
195 GGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAATAAA
* * *
1675 AGCTTTCCATGCAAAAGAAAATCATGAATATCGTTTATCCTAAAGAAGAGAATGTGTTTTATAGT
260 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTG-TTTATAGT
*
1740 GCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCATC-TTTGTCTCATTTGAGGCACGAAC
324 GCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAAC
* *
1804 TTAGACTTTACAAAAATTGGTGACAGGAAACCCTTTCTTACGAAACCAAAGAATCAATATCGTGT
389 TTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGT
*
1869 ATCCTGATGAGAAGACAAAGTTG
454 ATCCTTATGAGAAGACAAAGTTG
* *
1892 ATGGTGCCTAATCATG-AAAGAATGTGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGG
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
1956 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACAACCAAAGCATCAAT
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGAC-ACCAAAGCATCAAT
*
2021 GTCATGTATCCTAA-GAAGGGAATGTGTTCTTAGCTCCTAATCTCGAAAAG-ATGGAGACTCTTA
130 GTCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTA
2084 GGAGAATCGATGCTTGTCATAA-TATGGGATGAATTTTGATATTAAGGAAAAAAAGGGCGAAATA
195 GGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGG-AAAAAAGGGC-AAATA
* *
2148 AAAGATTTCCATGC-AAAGAAAATCGTGAATATCATTTAT-CTAATGAGGAGAATGTGTTTATAG
258 AAAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAG
* * *
2211 TACCTAATCACAAAAAGAATGAAGATCACTAC-AGGAAATCCTCATTTCTTTCTCCCATTTGAGG
323 TGCCTAATCACAAAAAGAATGAAGATCATTACTA-G-AATCCTCA-TT-TGTCT--CATTTGAGG
* * * * * *
2275 TAACGAACTTAGACTTTACAAAAAATGGTGGCAAGAAAGCCTTTC-TATGAAATCAAAGCATCAA
382 -CACGAACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAA
* *
2339 TATCGTGTATCCTTATGAGAAGACAAAAATTT
446 TATCGTGTATCCTTATGAGAAGAC-AAAGTTG
* *
2371 ATGGTGCCTAATCATGAAAAG-ATGGGGA-TAGCATGACAATACTTTTTTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* *
2434 CAAACTTTACATCTAATC--AATCTGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAA
66 CAAACTTTACTTCT-ATCAAAAAC-GGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAA
*
2497 TGTCATGTTTCCTTCCTAATGAAGGGAATGTGTTCTTATGCTCCCAATCTCGAAAAGAATGGAGA
129 TGTCATG--T--ATCCTAATGAAGGGAATGTGTTCTTA-GCTCCCAATCTCGAAAAGAATGGAGA
* * *** * *
2562 CTCTTAGGAGAATCTATGCTTTTCATAATTATAATATGAA-TTTGATATTAAGGAAAATAGCGCA
189 CTCTTAGGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCA
* *
2626 AA-GAAAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGCGAATGTGTTT
254 AATAAAAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTT
* * *
2690 ATAGTGCCTAATCACAAAAAGAATGAAGATCATTACTAGAACCCTTAATTGTCTCATTTGAGGCA
319 ATAGTGCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCA
* * * *
2755 GGAACTTAGACTTTACAAAAATTGGTGACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATAT
384 CGAACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATAT
* * *
2820 CATGTATCTTTATGAGAAGAC-AAGTTT
449 CGTGTATCCTTATGAGAAGACAAAGTTG
* *
2847 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTG--TTATTTAAGGGT
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
2910 CAAAC-TTACTTCTATCAAAAACGGTGGAAAGAAAA-ATTTTCTTGCG--ACCAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * *
2971 TCATGTATCCTAAGGAAGGGAATGTGTTCGTAGCT-CCTATCTCGAAAAGAATGGAGACTCTTA-
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
*
3034 GAGAATCGATGCTTGTCTTAATTATGGGATGAATTTTGATATTAAGGAAAAAA-GGCGAAATAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGC-AAATAAA
* *
3098 AGATTTCCATGCAAAAGAAAATCGTGAATATCATTTATCCTAATGAGGAGAATGTGTTATATAGT
260 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTT-TATAGT
* * * *
3163 CCCTAATCACAAAAAGAATG-AGATCACTACAAGAAATCCTCATTTCTTCTCCCATTTGAGGCAC
324 GCCTAATCACAAAAAGAATGAAGATCATTACTAG-AATCCTCATTT-GTCT--CATTTGAGGCAC
* * * *
3227 GAACTTAGACTATACAAAAATTGGTGACAAGAAAGCCATACTTAC-TAACCAAAGAATCAATATC
385 GAACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATC
*
3291 GTGTATCCTGATGAGAAGACAAAGTTG
450 GTGTATCCTTATGAGAAGACAAAGTTG
* * * **
3318 ATGGTGCCTAATCATGAAACGAAT-GGGACTAGCAATGACAATTCATGCTTGTCTTATTTAAGAG
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGC-ATGACAATTCTTATTTGTCTTATTTAAGAG
*
3382 ACAAACTTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATC-AT
65 ACAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAAT
* *
3446 GTCATGTTTCCTAATGAAGGGAAATGTGTTCTTAGCTCCCCCAATCTCGAAAAGAATTGAGACTC
130 GTCATGTATCCTAATGAAGGG-AATGTGTTCTTAGCT--CCCAATCTCGAAAAGAATGGAGACTC
* * *
3511 TTCTACGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTG-TATTAAGGAAAATAGCGCAA
192 -T-TAGGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAA
* * * *
3575 AGAAAAGAGTTCCATGCAAAAAAAAAATCGTGGAATAACCGTTTATCCTAAAGAGGAGAATGTGT
255 ATAAAAGATTTCCATGC-AAAAGAAAATCGT-GAAT-ATCGTTTATCCTAAAGAGGAGAATGTGT
* * * *
3640 TTATTGTGCCTAATCAC-AAAAGAATGAAGATCATCACTAGAATCCCCATTTGTCTCAGTTGAGG
317 TTATAGTGCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGG
*
3704 CACGAACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAACCAAT
382 CACGAACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAAT
* * *
3769 GTCGTGTTTCCTTATGAGAAGACAAAGTTT
447 ATCGTGTATCCTTATGAGAAGACAAAGTTG
3799 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* * *
3864 TAAACTTTACTTCTATCAAAAACGGTGGACAGAAAACATTTTCTTGCGACAACAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * * *
3929 TCATGTATCCTAATGAAGGGAATGTGTTCTTAACTCCTAATCTCGAAAGGAATGGAGACTCTTAC
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
* * *
3994 GAGAATCGATGGTTGTCATAATTATGGGATAAATTTTGATATTAAGGAAAAAAGGGAAAATAAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAATAAAA
* * *
4059 GATTTCCATGCAAAAG-AAATCGCGAATATCATTTATCCTAAAGAGGAGAATGTGTTTATAGTAC
261 GATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTGC
* * * *
4123 CTAATCACAAAAAGAATGAAGATAATTACTAGGATCCTCACTTGTCTTATTTGAGGCACGAACTT
326 CTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACTT
* *
4188 AGATTTTACAAAAATTGGTGACAAGAAAGTCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
391 AGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
*
4253 CCTTATGAGAAAACAAAGTTG
456 CCTTATGAGAAGACAAAGTTG
* * * * * ***
4274 ATGGAGCCTAATCATGAAACGAAGGGGGACTAGCATGACAATTCATGCCTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* * * *
4339 CAAACTTTACTTCTATC-AAAATGGTGGAAATAAAACATTTTCTTGTGACACTAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * * *
4403 CCATGTTTCCTAATGAACGGAATGTGTTCTTAGCTCCCAATCTTGAAAAGAATGGAGACTCTTAG
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
*
4468 GAGAATCGATGCTTGTCATAATTATGGTATGAATTTTGATATTAAGGAAAAAA-GGCGAAATAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGC-AAATAAA
* * * *
4532 AGATTTCCATGCAAAAGAAAATCGTGAATATCATTTATCCTAATGAGGAAAATGTGTTTATAGTA
260 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTG
* * * *
4597 CCTAATCACAAAAAGAATGAAGATCACTACAAGAATCCTCATTTCTCCCATTTGAGGCACGAACT
325 CCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACT
*
4662 TAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATTGTGTA
390 TAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTA
*
4727 TCCTGATGAGAAGACAAAGTTG
455 TCCTTATGAGAAGACAAAGTTG
* * * ***
4749 ATGGTGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCGTGCCTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* *
4814 CAAACCTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
*
4879 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTTCCCAATCTCGAAAAGAATGGAAACTCTTA
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGC-TCCCAATCTCGAAAAGAATGGAGACTCTTA
* * *** * * *
4944 CGAGAATCTATGCTTGTCATAATTATAATATG-ATTCTTGATATTAAGGAAAATAGTGCAAAGAA
195 GGAGAATCGATGCTTGTCATAATTATGGGATGAATT-TTGATATTAAGGAAAAAAGGGCAAATAA
5008 AAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGT
259 AAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGT
5073 GCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAAC
324 GCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAAC
* * * *
5138 TTAGACTTTACAAAAATTGGTGACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATATCATGT
389 TTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGT
* *
5203 ATCTTTATGAGAAGACAAAGTTT
454 ATCCTTATGAGAAGACAAAGTTG
5226 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
*
5291 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTACGACACCAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * *
5356 TCATGTATCCTAACGAAGGGAATGTGTTCTTAGCTCCTAATCTTGAAAAGAATGGAGACTCTTAG
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
5421 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAA-GGCGAAATAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGC-AAATAAA
*
5485 AGATTTCCATGCAAAAGAAAATCGTG-ATATCATTTATCCTAAAGAGGAGAATGTGTTTATAGTG
260 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTG
* * * * *
5549 CCTAATCACAAAAAGAATGAAGATCACTACAAGAATCCTCATTTCTCCCATTAGAGGCACGAACT
325 CCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACT
* *
5614 TAGACTTTACAAAAATTGGTGACAAGAAAGCCTTACTTACTAAACCAAAGAATCAATATCGTGTA
390 TAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTA
*
5679 TCCTGATGAGAAGACAAAGTTG
455 TCCTTATGAGAAGACAAAGTTG
* * * **
5701 ATGGTGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCATGCTTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* *
5766 CAAACTTTACTTCTATCAAAAATGGTGGAAAGAATACATTTTCTTGCGACACCAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* *
5831 TCATGTTTCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAC
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
* * *** * * * *
5896 GAGAATCTATGCTTGTCATAAATATAATATGAATCTTGATATTAAGGAAAATAGTGCAAAGAAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAATAAAA
*
5961 GATTTCCATGCAAAAGAAAATCATGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTGC
261 GATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTGC
6026 CTAATCAC-AAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACTT
326 CTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACTT
* * *
6090 AGACTTTACAAAAATTGGTGACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATATCGTGTAT
391 AGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
* *
6155 CCTGATGAGAAGACAAAGTTT
456 CCTTATGAGAAGACAAAGTTG
*
6176 ATGGTGCCTAATCATGAAAAGAATGGAGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* * *
6241 TAAACTTTACTTCTATCAAAAACGGTGGACAGAAAACATTTTCTTGCGACAACAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* *
6306 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCTAATCTCGAAAAGAATGGAGACTCTTAC
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
* * *
6371 GAGAATCGATGGTTGTCATAATTATGGGATAAATTTTGATATTAAGGAAAAAAGGGAAAATAAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAATAAAA
* * * *
6436 GATTTCCATGCAAAAGAAAATCATGAATATCATTTATCCTAAAAAGGAGAATGTGTTTATAGTAC
261 GATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTGC
* * * *
6501 CTAATCACAAAAAGAATGAAGATAATTACTAGGATCCTCACTTGTCTTATTTGAGGCACGAACTT
326 CTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACTT
*
6566 AGATTTTACAAAAATTGGTGACAAG-AAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
391 AGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
*
6630 CCTTATGAGAAAACAAAGTTG
456 CCTTATGAGAAGACAAAGTTG
* * * * ***
6651 ATGGAGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCATGCCTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* *
6716 CAAACTTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGTGACACCAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * * *
6781 CCATGTTTCCTAATGAACGGAATGTGTTCTTAGCTCCCAATCTCGAAATGAATGGAGACTCTTAG
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
*
6846 GAGAATCGATGCTTGTCATAATTATGGTATGAATTTTGATATTAAGGAAAAAA-GGCGAAATAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGC-AAATAAA
6910 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGCT-TTTATAGT
260 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATG-TGTTTATAGT
6974 GCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAAC
324 GCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAAC
* *
7039 TTAGACTTTACAAAAATTGGTGACAGGAAACCCTTTCTTACGAAACCAAAGAATCAATATCGTGT
389 TTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGT
*
7104 ATCCTGATGAGAAGACAAAGTTG
454 ATCCTTATGAGAAGACAAAGTTG
*
7127 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGG
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
7192 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACA-TTTCTTGCGACACCAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* *
7256 TCATGTATCCTAAGGAAGGGAATGTGTTCTTAGCTCCTAATCTCGAAAAGAATGGAGACTCTTAG
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
* *** * * * *
7321 GAGAATCGATGGTTGTCATAATTATAATATGAATCTTGATATTAAGGAAAATAGTGCAAAGAAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAATAAAA
* * *
7386 GCTTTCCATGCAAAAGAAAATCATGAATATCGTTTATCCTAAAGAAGAGAATGTGTTTATAGTGC
261 GATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTGC
7451 CTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACTT
326 CTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACTT
* *
7516 AGACTTTACAAAAATTGGTGACAGGAAACCCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
391 AGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
*
7581 CCTGATGAGAAGAC-AAGTTG
456 CCTTATGAGAAGACAAAGTTG
*
7601 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGG
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
*
7666 CAAACTTTACTTCTATTAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * *
7731 TCATGTATCCTAAGGAAGGGAATGTGTTCTTTGCTCCTAATCTCGAAAAGAATGGAGACTCTTAG
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
7796 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAA-GGCGAAATAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGC-AAATAAA
* * *
7860 AGATTTCCATGCAAAAGAAAATCGTGAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTA
260 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTG
* * * *
7925 CCTAATCACAAAAAGAATGAAGATCACTAC-AGGAATCCTCATTTCTCCCATTTGAGGTACGAAC
325 CCTAATCACAAAAAGAATGAAGATCATTACTA-GAATCCTCATTTGTCTCATTTGAGGCACGAAC
* * * * *
7989 TTAGACTTTACAAAAAATGGTGGCAAGAAAGCCTTTCTTATGAAATCAAAGCATCAATATCGTGT
389 TTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGT
* *
8054 ATCCTTATGAGAAGACAAAATTT
454 ATCCTTATGAGAAGACAAAGTTG
* *
8077 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATACTTTTTTTGTCTTATTTAAGAG
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTC-TTATTTGTCTTATTTAAGAG
* *
8142 ACAAACTTTACATCTATC-AAATCTGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAA
65 ACAAACTTTACTTCTATCAAAAAC-GGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAA
*
8206 TGTCATGTTTCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTT
129 TGTCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTT
* * *** * * *
8271 AGGAGAATCTATGCTTTTCATAATTATAATATGAATTTTGATATTAAGGAAAATAGCGCAAAGAA
194 AGGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAATAA
8336 AAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGT
259 AAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGT
* * * *
8401 GCCTAATCACAAAAAGAATGAAGATCATTACTAGAACCCTTAATTGTCTCATTTGAGGCAGGAAC
324 GCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAAC
* * * *
8466 TTAGACTTTACAAAAATTGGTGACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATATCATGT
389 TTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGT
* *
8531 ATCTTTATGAGAAGACAAAGTTT
454 ATCCTTATGAGAAGACAAAGTTG
* *
8554 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGGGT
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
*
8619 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACAACAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * *
8684 TCATGTATCCTAAGGAAGGGAATGTGTTCGTAGCTCCTAATCTCGAAAAGAATGGAGACTCTTAG
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
*
8749 GAGAATCGATGCTTGTCTTAATTATGGGATGAATTTTGATATTAAGGAAAAAA-GGCGAAATAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGC-AAATAAA
* * *
8813 AGATTTCCATGCAAAAGAAAATCGTGAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTC
260 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTG
* * * *
8878 CCTAATCACAAAAAGAATGAAGATCACTACAAGAATCCTCATTTCTCCCATTTGAGGCACGAACT
325 CCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACT
* * * *
8943 TAGACTATACAAAAATTGGTGACAAGAAAGCCATACTTACTAAACCAAAGAATCAATATCGTGTA
390 TAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTA
*
9008 TCCTGATGAGAAGACAAAGTTG
455 TCCTTATGAGAAGACAAAGTTG
* * * **
9030 ATGGTGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCATGCTTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
*
9095 CAAACTTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * *
9160 TCATGTTTCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGTCTCTTAC
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
* * * *
9225 GAGAATCGATGCTTGTCATAATTAT-GGATGAATTTTGTTATTAAGGAAAATAGCGCAAAGAAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAATAAAA
* * *
9289 GATTTCCATGCAAAAAAAAATCGTGAATACCGTTTATCCTAAAGAGGAGAATGTGTTTATTGTGC
261 GATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTGC
* *
9354 CTAATCACAAAAAGAATGAAGATCATCACTAGAATCCCCATTTGTCTCATTTGAGGCACGAACTT
326 CTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACTT
* * *
9419 AGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAACCAATGTCGTGTTT
391 AGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
*
9484 CCTTATGAGAAGACAAAGTTT
456 CCTTATGAGAAGACAAAGTTG
9505 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* * *
9570 TAAACTTTACTTCTATCAAAAACGGTGGACAGAAAACATTTTCTTGCGACAACAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * * *
9635 TCATGTATCCTAATGAAGGGAATGTGTTCTTAACTCCTAATCTCGAAAGGAATGGAGACTCTTAC
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
* * *
9700 GAGAATCGATGGTTGTCATAATTATGGGATAAATTTTGATATTAAGG-AAAAAGGGAAAATAAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAATAAAA
* * *
9764 GATTTCCATGCAAAAGAAAATCGCGAATATCATTTATCCTAAAGAGGAGAATGTGTTTATAGTAC
261 GATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTGC
* * * *
9829 CTAATCACAAAAAGAATGAAGATAATTACTAGGATCCTCACTTGTCTTATTTGAGGCACGAACTT
326 CTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACTT
* *
9894 AGATTTTACAAAAATTGGTGACAAGAAAGTCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
391 AGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
*
9959 CCTTATGAGAAAACAAAGTTG
456 CCTTATGAGAAGACAAAGTTG
* * * * ***
9980 ATGGAGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCATGCCTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* * * *
10045 CAAACTTTACTTCTATCAAAAATGGTGGAAATAAAACATTTTCTTGTGACACTAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * * *
10110 CCATGTTTCCTAATGAACGGAATGTGTTCTTAGCTCCCAATCTTGAAAAGAATGGAGACTCTTAG
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
*
10175 GAGAATCGATGCTTGTCATAATTATGGTATGAATTTTGATATTAAGGAAAAAA-GGCGAAATAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGC-AAATAAA
* * * * *
10239 CGATTTCCATGCAAAAGAAAATCGTGAATATCATTTATCCTAATGAGGAAAATGTGTTTATAGTA
260 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTG
* * * *
10304 CCTAATCACAAAAAGAATGAAGATCACTACAAGAATCCTCATTTCTCCCATTTGAGGCACGAACT
325 CCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACT
*
10369 TAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATTGTGTA
390 TAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTA
*
10434 TCCTGATGAGAAGACAAAGTTG
455 TCCTTATGAGAAGACAAAGTTG
* * * ***
10456 ATGGTGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCGTGCCTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* *
10521 CAAACCTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* *
10586 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCG-AAAGAATGGAAACTCTTAC
131 TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
* *** * * *
10650 GAGAATCTATGCTTGTCATAATTATAATATG-ATTCTTGATATTAAGGAAAATAGTGCAAAGAAA
196 GAGAATCGATGCTTGTCATAATTATGGGATGAATT-TTGATATTAAGGAAAAAAGGGCAAATAAA
10714 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTG
260 AGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTG
10779 CCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACT
325 CCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACT
* * * *
10844 TAGACTTTACAAAAATTGGTGACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATATCATGTA
390 TAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTA
* *
10909 TCTTTATGAGAAGACAAAGTTT
455 TCCTTATGAGAAGACAAAGTTG
10931 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGAC-ATTCTTATTTGTCTTA-TTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
*
10994 CAAAC-TTACTTCT-TCAAAAACGGTGGAAAGAAAACATTTTTCTTACGACACCAAAGCATCAAT
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACA-TTTTCTTGCGACACCAAAGCATCAAT
* * *
11057 GTCATGTATCCTAACGAAGGGAATGT-TTCTTAGCTCCTAATCTTGAAAAGAATGGAGACTCTTA
130 GTCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTA
11121 GGAGAATCGATGCTTGTCATAATT-TGGGATGAATTTTGATATTAAGGAAAAAA-GGCGAAATAA
195 GGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGC-AAATAA
* *
11184 AAGATTTCCATGCAAAAGAAAATCGTG-ATATCATTT-TCCT-ATGAGGAGAATGTGTTTATAGT
259 AAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGT
* * * * *
11246 CCCTAATCACAAAAAGAATGAAGATCACTAC-AGAATCCTCATTTCTCCCATTTGAGGCATGAAC
324 GCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAAC
* * *
11310 TTAGAC-TTACAAAAATTGGTGACAAGAAA-CCTTACGTACTAAACCAAAGAATCAATATCGTGT
389 TTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGT
*
11373 ATCCTGATGAGAAGACAAAGTTG
454 ATCCTTATGAGAAGACAAAGTTG
* * * ** *
11396 ATGGTTCCTAATCATG-AACGAATGGGGACTAGCATGACAA-TCATGGTTT-TCTTATGTAAGAG
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTC-TTATTTGTCTTATTTAAGAG
* *
11458 ACAAACTTTACTTCTATCAAAAATGGTGGAAAGAATACATTTTTCTTGCGAC-CCAAAGCATCAA
65 ACAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACA-TTTTCTTGCGACACCAAAGCATCAA
*
11522 TGTCATGTTTCCTAATGAAGGGAATGTGTTC-TAGCTCCCAATCTCGAAAAG-ATGGAGACTCTT
129 TGTCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTT
* * * * *
11585 ACGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGTAAAATAGCGCAAAGAA
194 AGGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAA-TA
11650 AAAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATTCCTAAAGAGGAGAATGTGTTTATA
258 AAAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTA-TCCTAAAGAGGAGAATGTGTTTATA
11715 GTGCCTAATCACAAAAAGAATG-AGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGA
322 GTGCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGA
** *
11779 ACTTAGACTTTACAAAAATTGGTGACTGGAAACCCTTTCTTACGAAACCAAAGAATCAATATCGT
387 ACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGT
* *
11844 GTATCCTGATGAGAAGACAAAGTTA
452 GTATCCTTATGAGAAGACAAAGTTG
* *
11869 AT-GTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATACTTTTTTTGTCTTATTT-AGAG
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTC-TTATTTGTCTTATTTAAGAG
* *
11932 ACAAACTTTACTTCCATCAAAAATGGTGGAAAGAAAACATTATTCTTGCGACACCAAAAGCATCA
65 ACAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATT-TTCTTGCGACACC-AAAGCATCA
* * *
11997 ATGTCATGTTTCCTAATGAAGTGAATGTGTTCTTAGCTCCCAATCTCAAAAAGAGATGGAGACTC
128 ATGTCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGA-ATGGAGACTC
* * * *
12062 TTATGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATT-AGGAAAATAGCGCAAAG
192 TTAGGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAAT
12126 AAAAGATTTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTAT
257 AAAAGA-TTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTAT
12191 AGTGGCCTAATC-CACAAAAGAATGAAGATCA-TACTAAGAATCCTCA-TTGTCTCATTTGAGGC
321 AGT-GCCTAATCACA-AAAAGAATGAAGATCATTACT-AGAATCCTCATTTGTCTCATTTGAGGC
* *
12253 ACGAACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTC-TACGAAACCAAAGAACCAATG
383 ACGAACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATA
* *
12317 TCGTGTTTCCTTATGAGAAGACAAAGTTT
448 TCGTGTATCCTTATGAGAAGACAAAGTTG
12346 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* * *
12411 TAAACTTTACTTCTATCAAAAACGGTGGACAGAAAACATTTTTCTTTGCGACAACAAAGCATCAA
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACA-TTTTC-TTGCGACACCAAAGCATCAA
* * * *
12476 TGTCATGTATCCTAATGAAGGGAATGTGTTCTTAACTCCTAATCTCGAAAGGAATGGCGACTCTT
129 TGTCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTT
* * * *
12541 ACGAGAATCGATGGTTGTCATAATTATGGGATAAATTTTGATATTAAGGGAAAAAAGGGAAAATA
194 AGGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAA-GGAAAAAAGGGCAAATA
* *
12606 AAAGATTTCCATGCAAAAAGAAAATCGCGAATATCATTTATCCTAAAGAGGAG-ATGTGTTTATA
258 AAAGATTTCCATGC-AAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATA
* * * * *
12670 GTACCTAATCACAAAAAGAATGAAGATAATTACTAGGATCCTCACTTGTCTTATTTGAGGCACGA
322 GTGCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGA
* *
12735 ACTTAGATTTTACAAAAATTGGTGACAAGAAAGTCTTTCTTACGAAACCAAAGAATCAATATCGT
387 ACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGT
*
12800 GTATCCTTATGAGAAAAC-AAGTTG
452 GTATCCTTATGAGAAGACAAAGTTG
* * * * *** *
12824 ATGGAGCCTAATCATGAAACGAAT-GGGACTAGCATGACAATTCATGCCTGTC-TAGTTAAGAGA
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
* * * *
12887 CAAA-TTTACTTCTATC-AAAATGGTGG-AATAAAACATTTTCTTGTGACA-CTAAGCATCAATG
66 CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
* * * *
12948 CCATGTTTTTCCTAATGAACGGAATGTGGTTCTT--CTCCCAATCTTGAAAAGAATGGAGACTC-
131 TCATG--TATCCTAATGAAGGGAATGT-GTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCT
*
13010 TAGGAGAATCGATGCTTGTCATAATTATGGTATGAATATTTATGATTTATTAAGGAAAAAA-GGC
193 TAGGAGAATCGATGCTTGTCATAATTATGGGATG-A-ATTT-TGA--TATTAAGGAAAAAAGGGC
* * *
13074 GAAATAAAAGATTTTCCATGCAAAAGAAAATCGTGAATAT-ATTTATCCTAATGAGGAAAAATGT
253 -AAATAAAAGA-TTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGG-AGAATGT
* * * * *
13138 GTTTATAGTACCTAATCACAAAAAGAATGAAGATCACTACAAAGAATCATTCTCA-TTCTCCCAT
315 GTTTATAGTGCCTAATCACAAAAAGAATGAAGATCATTAC-TAGAATC---CTCATTTGTCTCAT
13202 GTTGAGGCACGAACTTAGACTTTAACAAAAATTGGTGACAAGAAAGCCTTTCTTACTTAGAAACC
376 -TTGAGGCACGAACTTAGACTTT-ACAAAAATTGGTGACAAGAAAGCCTTTCTTAC---GAAACC
* *
13267 AAAGAATCAATATTGT-TATCCTGATGAGAAGAC-AAGTTG
436 AAAGAATCAATATCGTGTATCCTTATGAGAAGACAAAGTTG
* * * * ***
13306 ATGGTGCCTAATCATGAAACGAATGGGGACTAGCATGACCAATGCGTGCCTGTCTTATTTAAGAG
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGA-CAATTCTTATTTGTCTTATTTAAGAG
* *
13371 ACAAACCTTACTTCTAATCAAAAATGGTGG-AAGAAAAACATTTTCTTGCGACACCAAAGCATCA
65 ACAAACTTTACTTCT-ATCAAAAACGGTGGAAAG-AAAACATTTTCTTGCGACACCAAAGCATCA
*
13435 ATGTCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAAACTCT
128 ATGTCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCT
* * *** * * *
13500 TACGAGAATCTATGCTTGTCATAATTATAATATGATTTCTTGATATTAAAGGAAAATAGTGCAAA
193 TAGGAGAATCGATGCTTGTCATAATTATGGGATGAATT-TTGATATT-AAGGAAAAAAGGGCAAA
* *
13565 GAAAAGATTTCCATGCAAAAG-AAATCGTTAATA-CGTTTATCCT-AAGAGGAGAATGTGTTTAT
256 TAAAAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTAT
*
13627 AGTGCCTAATCAC-AAAAGAAATG-AGAGCATTACTAGAATCCTCATTTGTCTCATTTGAGGCAC
321 AGTGCCTAATCACAAAAAG-AATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCAC
* * *
13690 GAACTTAGACTTTACAAAAA-TGGTGACAGGAAACCCTTTCGTACGAAACCAAAGAAT-AATATC
385 GAACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATC
* * *
13753 ATGTA-GCTTA-GAGAAGACAAAGTTTT
450 GTGTATCCTTATGAGAAGACAAAG-TTG
13779 ATGGTGCCTAATCATGAAAAGAA-GGGGATTAGGCATGACAATTCTTATTTGTCTTATTTAAGAG
1 ATGGTGCCTAATCATGAAAAGAATGGGGATTA-GCATGACAATTCTTATTTGTCTTATTTAAGAG
*
13843 ACAAACTTTACTTCTAATCAAAAACGGTGGAAAGAAAACATTTTGCTTAC-ACACCAAAGCATCA
65 ACAAACTTTACTTCT-ATCAAAAACGGTGGAAAGAAAACATTTT-CTTGCGACACCAAAGCATCA
* * *
13907 ATGTCATGTATCCTAACGAAGGGAATGTGTTCTTAGCTCCTAATCTTG-AAAGAAATGGAGACTC
128 ATGTCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAG-AATGGAGACTC
13971 -TAGGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAA-GGCAAAT
192 TTAGGAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAAT
* * *
14034 AAAAGATTTCCCATGC-AAAGAAAATCGTGAATATCAATTTATACCTAATGAGGAGAAGGTGTTT
257 AAAAGATTT-CCATGCAAAAGAAAATCGTGAATATC-GTTTAT-CCTAAAGAGGAGAATGTGTTT
* * * * *
14098 ATAGTCCCCTAATCACAAAAAGAATGAAGATCACTACAAGAATCCTCATTTCTCCCATTTG-GGC
319 ATAGT-GCCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGC
* * *
14162 ATGAACTTAGACTTTACAAAAATTGGTGACAAGAAAG-CTTACTTACTAAA-CAAAGAATCAATA
383 ACGAACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATA
*
14225 TCGTGTATCCTGATGAGAAGACAAAGTTG
448 TCGTGTATCCTTATGAGAAGACAAAGTTG
* * * **
14254 ATGGTGCCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCATGGTTGTCTTATTTAAGAG
1 ATGGTG-CCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAG
* * *
14319 ACAAACTTTAACTTCTATCAAAAATGGTGGAAAGAATACATTTTCTTGCGACACCAAAGCAGCAA
65 ACAAACTTT-ACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAA
*
14384 TGTCATGTTTCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTA
129 TGTCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCT-
* * *
14449 TACGAGAATCGAT-CTTGTCATAATTATGGGATGAATTTTTGATATTAAGTAAAATAGCGCGCAA
193 TAGGAGAATCGATGCTTGTCATAATTATGGGATGAA-TTTTGATATTAAGGAAAAAAG-G-GCAA
* *
14513 AGAAAAGATTTCCATGCAAAAGAAAATCCGTGAATATCGTTTA-GCTAAAGAGGAGAATGTGTTT
255 ATAAAAGATTTCCATGCAAAAGAAAAT-CGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTT
14577 ATAGTGCCTAATCAC-AAAAGAATGAAGATCATTACTAAGAATCCTCATTTGTCTCA-TTGA-GC
319 ATAGTGCCTAATCACAAAAAGAATGAAGATCATTACT-AGAATCCTCATTTGTCTCATTTGAGGC
* ** * *
14639 ACGAAATTAGACTTTACAAAAATTGGTGACTGGAAACCCTTTCTTACAGAAACC-AAGAATCAAG
383 ACGAACTTAGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTAC-GAAACCAAAGAATCAAT
* *
14703 ATCGTGTATCCTGATGAGAAGACAAAGTTAA
447 ATCGTGTATCCTTATGAGAAGACAAAGTT-G
* *
14734 ATGGTGCCTAATCATGAAAAGAAAT-GGGATTAGCATGACAATACTTTTTTTGTCTTATTTAAGA
1 ATGGTGCCTAATCATGAAAAG-AATGGGGATTAGCATGACAATTC-TTATTTGTCTTATTTAAGA
* *
14798 GACAAACTTTACTTCCATCAAAAATGG-GGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAA
64 GACAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAA
* * * *
14862 TGTCATGTTTGCCTAATGAAGAGAATGTGTTCTTAGCTCCCAAGCTC-AAAAG-ATGGAGACTCG
129 TGTCATGTAT-CCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCT
* *
14925 TATGAGAATCGATGCTTGTCATAATTATGGGAATGAAATTTTGATATTAAGG--AAAAGCGCAAA
193 TAGGAGAATCGATGCTTGTCATAATTATGGG-ATG-AATTTTGATATTAAGGAAAAAAGGGCAAA
*
14988 -GAAAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTAT
256 TAAAAGATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTAT
15052 AGTGCCTAATCACAAAAAGAATGAAAAGATCATTACTA
321 AGTGCCTAATCACAAAAAGAATG--AAGATCATTACTA
Statistics
Matches: 13250, Mismatches: 1109, Indels: 503
0.89 0.07 0.03
Matches are distributed among these distances:
464 27 0.00
465 214 0.02
466 195 0.01
467 236 0.02
468 196 0.01
469 196 0.01
470 164 0.01
471 574 0.04
472 746 0.06
473 399 0.03
474 840 0.06
475 3922 0.30
476 1866 0.14
477 1354 0.10
478 763 0.06
479 448 0.03
480 158 0.01
481 217 0.02
482 183 0.01
483 210 0.02
484 93 0.01
485 67 0.01
486 26 0.00
487 27 0.00
488 37 0.00
489 46 0.00
490 46 0.00
ACGTcount: A:0.37, C:0.16, G:0.18, T:0.29
Consensus pattern (476 bp):
ATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGA
CAAACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATG
TCATGTATCCTAATGAAGGGAATGTGTTCTTAGCTCCCAATCTCGAAAAGAATGGAGACTCTTAG
GAGAATCGATGCTTGTCATAATTATGGGATGAATTTTGATATTAAGGAAAAAAGGGCAAATAAAA
GATTTCCATGCAAAAGAAAATCGTGAATATCGTTTATCCTAAAGAGGAGAATGTGTTTATAGTGC
CTAATCACAAAAAGAATGAAGATCATTACTAGAATCCTCATTTGTCTCATTTGAGGCACGAACTT
AGACTTTACAAAAATTGGTGACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATATCGTGTAT
CCTTATGAGAAGACAAAGTTG
Found at i:5395 original size:159 final size:157
Alignment explanation
Indices: 11--12532 Score: 1965
Period size: 158 Copynumber: 79.1 Consensus size: 157
1 AAATTTATGG
* ** * * *
11 TGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATACTTTTTTGTCTTA-TTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* ** * * *
75 CTTT-CATCTATCAAATCTGGTGGGAAGAAAACATTTTCTTGCGACACCAAAGCATCAATGTCAT
66 CTTTAC-TTTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
*
139 GTTTCCTAATGAAGGGAATGTGTTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTG-TT-TTAGC
* * * * * * * *
170 T-CCCAATC-TCGAAAAGAATGGAGACTCTTAGGAGAA-TC-TATGCTTTTCATAATTATA-ATA
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTA-AGAGA
** *** * * * * * * * ** * * *
230 TGAA-TTTGA-TATTAAGGAAAATAGCGCAAAGAAAAGATTTCCATGCAAAAGAAAATCGTGAAT
62 CAAACTTT-ACT-TTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAAT
* *
293 ATCGTTTATCCT-A-AAGGAGAATGTGTTTATAG-
125 ATCATGTATCCTAAGAAGG-GAATGTGTTT-TAGC
** * * * * * * *
325 TGCCTAATCACAAAAAG-A-GAAGATCA-TACT-AGAA-CCTTAATTGTCTCATTTAGGAGGCAG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAGACA-
* * * ** * * *
385 GAACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATA
64 -AACTT-TACTTTATCAAAAA-TGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATA
* ** * * *
448 TCATGTATCTTTATGAGAAGACAAAGT-TTAT-GG
126 TCATGTATC-CTA--AGAAGGGAATGTGTTTTAGC
** *
481 TGCCTAATCATGAAAAGAAT-G-GATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * * *
544 CTTTACTTCTATC-AAAACGGTGGAAAGAAAACATTTTCTTACGACACC-AAGCATCAATGTCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
607 GTATCCTAACGAAGGGAATGTGTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * * *
637 T-CCTAATCTTGAAAAGAATGGAGA-TCTTA-GGGAA-TC-GATGGTTGTCATAATTATGGGATA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGACA
* ** * * * * * ** * * *
697 AATTTTGA-TATTAAGGAAAAA-AG-GGAAA-ATAAAGATTTCCATGCAAAAGAAAATCGTGAAT
64 AACTTT-ACT-TT-ATCAAAAATGGTGGAAAGA-AAACATTTTCTTGCGAAACCAAAGCATCAAT
* * *
758 ATCATTTATCCTAAAAAGGAGAATGTG-TTTATC
125 ATCATGTATCCTAAGAAGG-GAATGTGTTTTAGC
* ** * * * * * * *
791 TTACCTAATCACAAAAAGAATGAAGATAATTACT-AGGATCCTCACTTGTCTTATTTGAG-GCAC
1 -TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-AC
* * * * * * *
854 GAACTTAGATTTTA-CAAAAATTGGT-GACAAGAAAGC-CTTTCTTACGAAACCAAAGAATCAAT
63 AAACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAAACATTTTCTTGCGAAACCAAAGCATCAAT
* *** * ** *
916 ATCGTGTATCCTTATGAGAAAACAAAGT-TGAT-GG
125 ATCATGTATCC-TA--AGAAGGGAATGTGTTTTAGC
* * * * ** * * ***
950 AGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCATGCCTGTCTTATTTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * *
1015 CTTTACTTCTATCAAAAATGGTGGAAAG-AAACATTTTCTTGTGACACCAAAGCATCAAT-GCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
* *
1078 GTTTCCTAATGAACGGAATGTGTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * * *
1108 T-CCCAATC-TCGAAATGAATGGAGACTCTTAGGAGAA-TC-GATGCTTGTCATAATTATG-GTA
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAG-A
** * ** * * * * * * * ** * * *
1168 TGAATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGTGAA
62 CAAACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAA
* * *
1231 TATCGTTTATCCTAA-AGAGGAGAATGT-TTATAG-
124 TATCATGTATCCTAAGA-AGG-GAATGTGTTTTAGC
* * * * * * *
1264 TGCCTAATCA-CAAGAAGAATGAAGATCATTACT-AGAATCCTCATTTGTCTCATTTGAG-GCAC
1 TGCCTAATCATGAA-AAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-AC
* * * * ** * *
1326 GAACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCTTACGAAACCAAAGAATCAATA
63 AAACTT-TACTTTATCAAAAA-TGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATA
* ** * * *
1389 TCGTGTATCCTGATGAGAAGACAAAGTG--AT-GG
126 TCATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
* * ** * *
1421 TGCCTAATCATGAAAAGAATGGGGTTTAGCATGACAATTCTTATTTGTCTTATTTAAGAGGCAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * *
1486 CTCTTACTTCTATCAAAAACGGTGG-AAG-AAACATTTTCTTGCGACACCAAAGCATCAATGTCA
66 CT-TTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCA
1549 TGTATCCTAAGGAAGGGAATGTGTTCTTAGC
129 TGTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * *
1580 T-CCTAATC-TCGAAAAGAATGGAGACTCTTAGGAGAA-TC-GATGGTTGTCATAATTATAATAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTC-TTATT-TAAGA-
* * *** * * * * * ** * *
1641 G--AATCTTGA-TATTAAGGAAAATAGTGCAAAGAAAAGC-TTTCCATGCAAAAGAAAATCATGA
60 GACAAACTTTACT-TTATCAAAAATGGTGGAAAGAAAA-CATTTTCTTGCGAAACCAAAGCATCA
* * *
1702 ATATCGTTTATCCTAAAGAAGAGAATGTGTTTTATAG-
123 ATATCATGTATCCT-AAGAAGGGAATGTG-TTT-TAGC
** * * * * * * *
1739 TGCCTAATCACAAAAAGAATGAAGATCATTACT-AGAA-TCATCTTTGTCTCATTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * ** * *
1801 AACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCTTACGAAACCAAAGAATCAATAT
64 AACTT-TACTTTATCAAAAA-TGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATAT
* ** * ** *
1864 CGTGTATCCTGATGAGAAGACAAAGT-TGAT-GG
127 CATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
** * *
1896 TGCCTAATCATG-AAAGAATGTG-GATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGGCAA
1 TGCCTAATCATGAAAAGAATG-GAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAA
* *
1959 ACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACAACCAAAGCATCAATGTC
65 ACTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGA-AACCAAAGCATCAATATC
2024 ATGTATCCTAAGAAGGGAATGTGTTCTTAGC
128 ATGTATCCTAAGAAGGGAATGTGTT-TTAGC
* * * * * * * * *
2055 T-CCTAATC-TCGAAAAG-ATGGAGACTCTTAGGAGAA-TC-GATGCTTGTCATA-ATATGGGAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGAC
* * ** * * * * * ** * * *
2114 GAATTTTGA-TATTAAGGAAAAAAAGG-GCGAAATAAAAGATTTCCATGC-AAAGAAAATCGTGA
63 AAACTTT-ACT-TT-A-TCAAAAATGGTG-GAAAGAAAACATTTTCTTGCGAAACCAAAGCATCA
*
2176 ATATCATTTAT-CTAATG-AGGAGAATGTGTTTATAG-
123 ATATCATGTATCCTAA-GAAGG-GAATGTGTTT-TAGC
* ** * * * * * * ** *
2211 TACCTAATCACAAAAAGAATGAAGATCACTA-CAGGAAATCCTCATTTCTTTCTCCCATTTGAG-
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGA-G-AAT--TC--TTATTTGTCTTATTTAAGA
* * * * * *
2274 GTAACGAACTTAGACTTTA-CAAAAAATGGTGGCAAGAAAGC-CTTTCTAT--GAAATCAAAGCA
60 G--ACAAACTT-TACTTTATC-AAAAATGGTGGAAAGAAAACATTTTCT-TGCGAAACCAAAGCA
* ** *** *
2335 TCAATATCGTGTATCCTTATGAGAAGACAA--AAATTTATGG
120 TCAATATCATGTATCC-TA--AGAAGGGAATGTGTTTTA-GC
* ** * * *
2375 TGCCTAATCATGAAAAG-ATGGGGA-TAGCATGACAATACTTTTTTGTCTTATTTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* ** * *
2438 CTTTACATCTAATC-AATCTGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATGTCA
66 CTTTAC-T-TTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCA
*
2502 TGTTTCCTTCCTAATGAAGGGAATGTGTTCTTATGC
129 TG--T--ATCCTAA-GAAGGGAATGTGTT-TTA-GC
* * * * * * * *
2538 T-CCCAATC-TCGAAAAGAATGGAGACTCTTAGGAGAA-TC-TATGCTTTTCATAATTATA-ATA
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTA-AGAGA
** *** * * * * * * * ** * * *
2598 TGAA-TTTGA-TATTAAGGAAAATAGCGCAAAG-AAAGATTTCCATGCAAAAGAAAATCGTGAAT
62 CAAACTTT-ACT-TTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAAT
* *
2660 ATCGTTTATCCTAA-AGAGGCGAATGTGTTTATAG-
125 ATCATGTATCCTAAGA-AGG-GAATGTGTTT-TAGC
** * * ** * * *
2694 TGCCTAATCACAAAAAGAATGAAGATCATTACT-AGAACCCTTAATTGTCTCATTT--GAGGCAG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAGACA-
* * * ** * * *
2756 GAACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATA
64 -AACTT-TACTTTATCAAAAA-TGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATA
* ** * *
2819 TCATGTATCTTTATGAGAAGACAA-GT-TTAT-GG
126 TCATGTATC-CTA--AGAAGGGAATGTGTTTTAGC
* ** * * *
2851 TGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTG--TTATTTAAGGGTCAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* *
2914 C-TTACTTCTATCAAAAACGGTGGAAAGAAAA-ATTTTCTTGCG--ACCAAAGCATCAATGTCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
*
2975 GTATCCTAAGGAAGGGAATGTGTTCGTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * *
3005 T-CCT-ATC-TCGAAAAGAATGGAGACTCTTA-GAGAA-TC-GATGCTTGTCTTAATTATGGGAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGAC
* * ** * * * * * * * ** * * *
3064 GAATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGTGAAT
63 AAACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAAT
*
3127 ATCATTTATCCTAATG-AGGAGAATGTGTTATATAG-
125 ATCATGTATCCTAA-GAAGG-GAATGTGTT-T-TAGC
* ** * * ** * * * * *
3162 TCCCTAATCACAAAAAGAAT-GAGATCACTACAAGAAATCCTCATTTCTTCTCCCATTTGAG-GC
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAG-AATTCTTATTT-GTCT--TATTTAAGAG-
* * * * * * * *
3225 ACGAACTTAGACTATA-CAAAAATTGGT-GACAAGAAAGCCA--TACTTAC-TAACCAAAGAATC
61 ACAAACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAA-ACATTTTCTTGCGAAACCAAAGCATC
* ** * ** *
3285 AATATCGTGTATCCTGATGAGAAGACAAAGT-TGAT-GG
122 AATATCATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
* * ** * * **
3322 TGCCTAATCATGAAACGAATGG-GACTAGCAATGACAATTCATGCTTGTCTTATTTAAGAGACAA
1 TGCCTAATCATGAAAAGAATGGAGATTA-TTATGAGAATTCTTATTTGTCTTATTTAAGAGACAA
* *
3386 ACTTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATC-ATGTCA
65 ACTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCA
*
3450 TGTTTCCTAATGAAGGGAAATGTGTTCTTAGC
129 TGTATCCTAA-GAAGGG-AATGTGTT-TTAGC
* * * * * * * *
3482 TCCCCCAATC-TCGAAAAGAATTGAGACTCT-TCTACGAGAA-TC-GATGCTTGTCATAATTATG
1 T-GCCTAATCAT-GAAAAGAATGGAGA-T-TAT-TATGAGAATTCTTAT--TTGTCTTATTTAAG
* ** ** *** * * * * * * * * ** * *
3543 GGATGAA-TTTTGTATTAAGGAAAATAGCGCAAAGAAAAGAGTTCCATGCAAAAAAAAAATCGTG
59 AGACAAACTTTACT-TTATCAAAAATGGTGGAAAGAAAACATTTTCTTGC-GAAACCAAAGCAT-
* * * * *
3607 GAATAACCGTTTATCCTAA-AGAGGAGAATGTGTTTATTG-
121 CAAT-ATCATGTATCCTAAGA-AGG-GAATGTGTTT-TAGC
* * * * * ** * * * *
3646 TGCCTAATCA-CAAAAGAATGAAGATCATCACT-AGAATCCCCATTTGTCTCAGTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * * * * *
3708 AACTTAGACTTTA-CAAAAATTGGT-GACAAGAAAGC-CTTTCTTACGAAACCAAAGAACCAATG
64 AACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAAACATTTTCTTGCGAAACCAAAGCATCAATA
* * ** * * *
3770 TCGTGTTTCCTTATGAGAAGACAAAGT-TTAT-GG
126 TCATGTATCC-TA--AGAAGGGAATGTGTTTTAGC
* ** * *
3803 TGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGATAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * *
3868 CTTTACTTCTATCAAAAACGGTGGACAGAAAACATTTTCTTGCGACAA-CAAAGCATCAATGTCA
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGA-AACCAAAGCATCAATATCA
*
3932 TGTATCCTAATGAAGGGAATGTGTTCTTAAC
129 TGTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * * * *
3963 T-CCTAATC-TCGAAAGGAATGGAGACTCTTACGAGAA-TC-GATGGTTGTCATAATTATGGGAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGAC
* ** * * * * * * ** * *
4024 AAATTTTGA-TATTAAGGAAAAAAGG-GAAAATAAAAGATTTCCATGC-AAAAGAAATC-GCGAA
63 AAACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATC-AA
*
4085 TATCATTTATCCTAA-AGAGGAGAATGTGTTTATAG-
124 TATCATGTATCCTAAGA-AGG-GAATGTGTTT-TAGC
* ** * * * * * * * *
4120 TACCTAATCACAAAAAGAATGAAGATAATTACT-AGGATCCTCACTTGTCTTATTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * * *
4183 AACTTAGATTTTA-CAAAAATTGGT-GACAAG-AAA-GTCTTTCTTACGAAACCAAAGAATCAAT
64 AACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAAACAT-TTTCTTGCGAAACCAAAGCATCAAT
* *** * ** *
4244 ATCGTGTATCCTTATGAGAAAACAAAGT-TGAT-GG
125 ATCATGTATCC-TA--AGAAGGGAATGTGTTTTAGC
* * * * * ** * * ***
4278 AGCCTAATCATGAAACGAAGGGGGACTAGCATGACAATTCATGCCTGTCTTATTTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * * * **
4343 CTTTACTTCTATC-AAAATGGTGGAAATAAAACATTTTCTTGTGACACTAAAGCATCAATGCCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
* *
4407 GTTTCCTAATGAACGGAATGTGTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * * * *
4437 T-CCCAATCTTGAAAAGAATGGAGACTCTTAGGAGAA-TC-GATGCTTGTCATAATTATG-GTAT
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAG-AC
* * ** * * * * * * * ** * * *
4498 GAATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGTGAAT
63 AAACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAAT
* *
4561 ATCATTTATCCTAATG-AGGAAAATGTGTTTATAG-
125 ATCATGTATCCTAA-GAAGG-GAATGTGTTT-TAGC
* ** * * * ** * * * ** * *
4595 TACCTAATCACAAAAAGAATGAAGATCACTACAAGAATCCTCATTTCTCCCATTTGAG-GCACGA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAG-ACAA
* * * * *
4659 ACTTAGACTTTA-CAAAAATTGGT-GACAAGAAAGC-CTTTCTTACGAAACCAAAGAATCAATAT
65 ACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAAACATTTTCTTGCGAAACCAAAGCATCAATAT
** ** * ** *
4721 TGTGTATCCTGATGAGAAGACAAAGT-TGAT-GG
127 CATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
* * * ** * * ***
4753 TGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCGTGCCTGTCTTATTTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * *
4818 CCTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATGTCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
4883 GTATCCTAATGAAGGGAATGTGTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * *
4913 TTCCCAATC-TCGAAAAGAATGGAAACTCTTACGAGAA-TC-TATGCTTGTCATAATTATAATAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTC-TTATT-TAAGA-
** * *** * * * * * * ** * * *
4975 G--ATTCTTGA-TATTAAGGAAAATAGTGCAAAGAAAAGATTTCCATGCAAAAGAAAATCGTGAA
60 GACAAACTTTACT-TTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAA
* *
5037 TATCGTTTATCCTAA-AGAGGAGAATGTGTTTATAG-
124 TATCATGTATCCTAAGA-AGG-GAATGTGTTT-TAGC
** * * * * * * *
5072 TGCCTAATCACAAAAAGAATGAAGATCATTACT-AGAATCCTCATTTGTCTCATTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * ** * * *
5135 AACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATAT
64 AACTT-TACTTTATCAAAAA-TGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATAT
* ** * * *
5198 CATGTATCTTTATGAGAAGACAAAGT-TTAT-GG
127 CATGTATC-CTA--AGAAGGGAATGTGTTTTAGC
* ** *
5230 TGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * * *
5295 CTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTACGACACCAAAGCATCAATGTCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
5360 GTATCCTAACGAAGGGAATGTGTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * * * **
5390 T-CCTAATCTTGAAAAGAATGGAGACTCTTAGGAGAA-TC-GATGCTTGTCATAATTATGGGATG
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGACA
* ** * * * * * * * ** * * *
5452 AATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGT-GATA
64 AACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATA
*
5514 TCATTTATCCTAA-AGAGGAGAATGTGTTTATAG-
126 TCATGTATCCTAAGA-AGG-GAATGTGTTT-TAGC
** * * * ** * * * ** *
5547 TGCCTAATCACAAAAAGAATGAAGATCACTACAAGAATCCTCATTTCTCCCA-TT-AGAGGCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGA-G-ACA
* * * * * * *
5610 AACTTAGACTTTA-CAAAAATTGGT-GACAAGAAAGC-CTTACTTACTAAACCAAAGAATCAATA
64 AACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAAACATTTTCTTGCGAAACCAAAGCATCAATA
* ** * ** *
5672 TCGTGTATCCTGATGAGAAGACAAAGT-TGAT-GG
126 TCATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
* * * ** * * **
5705 TGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCATGCTTGTCTTATTTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * *
5770 CTTTACTTCTATCAAAAATGGTGGAAAGAATACATTTTCTTGCGACACCAAAGCATCAATGTCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
*
5835 GTTTCCTAATGAAGGGAATGTGTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * *
5865 T-CCCAATC-TCGAAAAGAATGGAGACTCTTACGAGAA-TC-TATGCTTGTCATAAATATAATAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTC-T-TATTTAAGA-
* * *** * * * * * * ** * *
5926 G--AATCTTGA-TATTAAGGAAAATAGTGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATGAA
60 GACAAACTTTACT-TTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAA
* *
5988 TATCGTTTATCCTAA-AGAGGAGAATGTGTTTATAG-
124 TATCATGTATCCTAAGA-AGG-GAATGTGTTT-TAGC
* * * * * * * *
6023 TGCCTAATCA-CAAAAGAATGAAGATCATTACT-AGAATCCTCATTTGTCTCATTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * ** * * *
6085 AACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATAT
64 AACTT-TACTTTATCAAAAA-TGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATAT
* ** * * *
6148 CGTGTATCCTGATGAGAAGACAAAGT-TTAT-GG
127 CATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
** * *
6180 TGCCTAATCATGAAAAGAATGGAGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGATAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * *
6245 CTTTACTTCTATCAAAAACGGTGGACAGAAAACATTTTCTTGCGACAA-CAAAGCATCAATGTCA
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGA-AACCAAAGCATCAATATCA
6309 TGTATCCTAATGAAGGGAATGTGTTCTTAGC
129 TGTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * * *
6340 T-CCTAATC-TCGAAAAGAATGGAGACTCTTACGAGAA-TC-GATGGTTGTCATAATTATGGGAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGAC
* ** * * * * * * * ** * *
6401 AAATTTTGA-TATTAAGGAAAAAAGG-GAAAATAAAAGATTTCCATGCAAAAGAAAATCATGAAT
63 AAACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAAT
* *
6464 ATCATTTATCCTAAAAAGGAGAATGTGTTTATAG-
125 ATCATGTATCCTAAGAAGG-GAATGTGTTT-TAGC
* ** * * * * * * * *
6498 TACCTAATCACAAAAAGAATGAAGATAATTACT-AGGATCCTCACTTGTCTTATTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * * * *
6561 AACTTAGATTTTA-CAAAAATTGGT-GACAAG-AAGC-CTTTCTTACGAAACCAAAGAATCAATA
64 AACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAAACATTTTCTTGCGAAACCAAAGCATCAATA
* *** * ** *
6622 TCGTGTATCCTTATGAGAAAACAAAGT-TGAT-GG
126 TCATGTATCC-TA--AGAAGGGAATGTGTTTTAGC
* * * * ** * * ***
6655 AGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCATGCCTGTCTTATTTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * **
6720 CTTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGTGACACCAAAGCATCAATGCCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
* *
6785 GTTTCCTAATGAACGGAATGTGTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * * *
6815 T-CCCAATC-TCGAAATGAATGGAGACTCTTAGGAGAA-TC-GATGCTTGTCATAATTATG-GTA
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAG-A
** * ** * * * * * * * ** * * *
6875 TGAATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGTGAA
62 CAAACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAA
* *
6938 TATCGTTTATCCTAA-AGAGGAGAATGCT-TTTATAG-
124 TATCATGTATCCTAAGA-AGG-GAATG-TGTTT-TAGC
** * * * * * * *
6973 TGCCTAATCACAAAAAGAATGAAGATCATTACT-AGAATCCTCATTTGTCTCATTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * ** * *
7036 AACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCTTACGAAACCAAAGAATCAATAT
64 AACTT-TACTTTATCAAAAA-TGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATAT
* ** * ** *
7099 CGTGTATCCTGATGAGAAGACAAAGT-TGAT-GG
127 CATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
* ** * *
7131 TGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGGCAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * *
7196 CTTTACTTCTATCAAAAACGGTGGAAAGAAAACA-TTTCTTGCGACACCAAAGCATCAATGTCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
7260 GTATCCTAAGGAAGGGAATGTGTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * *
7290 T-CCTAATC-TCGAAAAGAATGGAGACTCTTAGGAGAA-TC-GATGGTTGTCATAATTATAATAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTC-TTATT-TAAGA-
* * *** * * * * * ** * *
7351 G--AATCTTGA-TATTAAGGAAAATAGTGCAAAGAAAAGC-TTTCCATGCAAAAGAAAATCATGA
60 GACAAACTTTACT-TTATCAAAAATGGTGGAAAGAAAA-CATTTTCTTGCGAAACCAAAGCATCA
* * *
7412 ATATCGTTTATCCTAAAGAAGAGAATGTGTTTATAG-
123 ATATCATGTATCCT-AAGAAGGGAATGTGTTT-TAGC
** * * * * * * *
7448 TGCCTAATCACAAAAAGAATGAAGATCATTACT-AGAATCCTCATTTGTCTCATTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * ** * *
7511 AACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCTTACGAAACCAAAGAATCAATAT
64 AACTT-TACTTTATCAAAAA-TGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATAT
* ** ** *
7574 CGTGTATCCTGATGAGAAGACAA-GT-TGAT-GG
127 CATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
* ** * *
7605 TGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGGCAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * * *
7670 CTTTACTTCTATTAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATGTCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
*
7735 GTATCCTAAGGAAGGGAATGTGTTCTTTGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * * *
7765 T-CCTAATC-TCGAAAAGAATGGAGACTCTTAGGAGAA-TC-GATGCTTGTCATAATTATGGGAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGAC
* * ** * * * * * * * ** * * *
7826 GAATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGTGAAT
63 AAACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAAT
*
7889 ATCATTTATCCTAATG-AGGAGAATGTGTTTATAG-
125 ATCATGTATCCTAA-GAAGG-GAATGTGTTT-TAGC
* ** * * * * * * * ** * *
7923 TACCTAATCACAAAAAGAATGAAGATCACTA-CAGGAATCCTCATTTCTCCCATTTGAG-GTACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGA-GAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * * ** *
7986 AACTTAGACTTTA-CAAAAAATGGTGGCAAGAAAGC-CTTTCTTATGAAATCAAAGCATCAATAT
64 AACTT-TACTTTATC-AAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATAT
* ** ** * *
8049 CGTGTATCCTTATGAGAAGACAAAAT-TTAT-GG
127 CATGTATCC-TA--AGAAGGGAATGTGTTTTAGC
* ** * * *
8081 TGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATACTTTTTTTGTCTTATTTAAGAGACAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTC-TTATTTGTCTTATTTAAGAGACAA
* ** * *
8146 ACTTTACATCTATCAAATCTGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATGTCA
65 ACTTTAC-TTTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCA
*
8211 TGTTTCCTAATGAAGGGAATGTGTTCTTAGC
129 TGTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * *
8242 T-CCCAATC-TCGAAAAGAATGGAGACTCTTAGGAGAA-TC-TATGCTTTTCATAATTATA-ATA
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTA-AGAGA
** * *** * * * * * * * ** * * *
8302 TGAATTTTGA-TATTAAGGAAAATAGCGCAAAGAAAAGATTTCCATGCAAAAGAAAATCGTGAAT
62 CAAACTTT-ACT-TTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAAT
* *
8366 ATCGTTTATCCTAA-AGAGGAGAATGTGTTTATAG-
125 ATCATGTATCCTAAGA-AGG-GAATGTGTTT-TAGC
** * * ** * * *
8400 TGCCTAATCACAAAAAGAATGAAGATCATTACT-AGAACCCTTAATTGTCTCATTT--GAGGCAG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAGACA-
* * * ** * * *
8462 GAACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATA
64 -AACTT-TACTTTATCAAAAA-TGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATA
* ** * * *
8525 TCATGTATCTTTATGAGAAGACAAAGT-TTAT-GG
126 TCATGTATC-CTA--AGAAGGGAATGTGTTTTAGC
* ** * * *
8558 TGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGGGTCAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* *
8623 CTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACAA-CAAAGCATCAATGTCA
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGA-AACCAAAGCATCAATATCA
*
8687 TGTATCCTAAGGAAGGGAATGTGTTCGTAGC
129 TGTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * *
8718 T-CCTAATC-TCGAAAAGAATGGAGACTCTTAGGAGAA-TC-GATGCTTGTCTTAATTATGGGAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGAC
* * ** * * * * * * * ** * * *
8779 GAATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGTGAAT
63 AAACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAAT
*
8842 ATCATTTATCCTAATG-AGGAGAATGTGTTTATAG-
125 ATCATGTATCCTAA-GAAGG-GAATGTGTTT-TAGC
* ** * * * ** * * * ** * *
8876 TCCCTAATCACAAAAAGAATGAAGATCACTACAAGAATCCTCATTTCTCCCATTTGAG-GCACGA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAG-ACAA
* * * * * * *
8940 ACTTAGACTATA-CAAAAATTGGT-GACAAGAAAGCCA--TACTTACTAAACCAAAGAATCAATA
65 ACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAA-ACATTTTCTTGCGAAACCAAAGCATCAATA
* ** * ** *
9001 TCGTGTATCCTGATGAGAAGACAAAGT-TGAT-GG
126 TCATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
* * * ** * * **
9034 TGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCATGCTTGTCTTATTTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* *
9099 CTTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATGTCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
*
9164 GTTTCCTAATGAAGGGAATGTGTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * *
9194 T-CCCAATC-TCGAAAAGAATGGAG-TCTCTTACGAGAA-TC-GATGCTTGTCATAATTATG-GA
1 TGCCTAATCAT-GAAAAGAATGGAGAT-TATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGA
** * ** *** * * * * * * * ** * * *
9253 TGAATTTTGTTATTAAGGAAAATAGCGCAAAGAAAAGATTTCCATGCAAAAAAAAATCGTGAATA
62 CAAACTTTACT-TTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATA
* * * *
9318 CCGTTTATCCTAA-AGAGGAGAATGTGTTTATTG-
126 TCATGTATCCTAAGA-AGG-GAATGTGTTT-TAGC
** * * * * ** * * *
9351 TGCCTAATCACAAAAAGAATGAAGATCATCACT-AGAATCCCCATTTGTCTCATTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * * * * *
9414 AACTTAGACTTTA-CAAAAATTGGT-GACAAGAAAGC-CTTTCTTACGAAACCAAAGAACCAATG
64 AACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAAACATTTTCTTGCGAAACCAAAGCATCAATA
* * ** * * *
9476 TCGTGTTTCCTTATGAGAAGACAAAGT-TTAT-GG
126 TCATGTATCC-TA--AGAAGGGAATGTGTTTTAGC
* ** * *
9509 TGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGATAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * *
9574 CTTTACTTCTATCAAAAACGGTGGACAGAAAACATTTTCTTGCGACAA-CAAAGCATCAATGTCA
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGA-AACCAAAGCATCAATATCA
*
9638 TGTATCCTAATGAAGGGAATGTGTTCTTAAC
129 TGTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * * * *
9669 T-CCTAATC-TCGAAAGGAATGGAGACTCTTACGAGAA-TC-GATGGTTGTCATAATTATGGGAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGAC
* ** * * * * * * ** * *
9730 AAATTTTGA-TATTAAGGAAAAA-GG-GAAAATAAAAGATTTCCATGCAAAAGAAAATC-GCGAA
63 AAACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATC-AA
*
9791 TATCATTTATCCTAA-AGAGGAGAATGTGTTTATAG-
124 TATCATGTATCCTAAGA-AGG-GAATGTGTTT-TAGC
* ** * * * * * * * *
9826 TACCTAATCACAAAAAGAATGAAGATAATTACT-AGGATCCTCACTTGTCTTATTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * * *
9889 AACTTAGATTTTA-CAAAAATTGGT-GACAAG-AAA-GTCTTTCTTACGAAACCAAAGAATCAAT
64 AACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAAACAT-TTTCTTGCGAAACCAAAGCATCAAT
* *** * ** *
9950 ATCGTGTATCCTTATGAGAAAACAAAGT-TGAT-GG
125 ATCATGTATCC-TA--AGAAGGGAATGTGTTTTAGC
* * * * ** * * ***
9984 AGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCATGCCTGTCTTATTTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * * * **
10049 CTTTACTTCTATCAAAAATGGTGGAAATAAAACATTTTCTTGTGACACTAAAGCATCAATGCCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
* *
10114 GTTTCCTAATGAACGGAATGTGTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * * * *
10144 T-CCCAATCTTGAAAAGAATGGAGACTCTTAGGAGAA-TC-GATGCTTGTCATAATTATG-GTAT
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAG-AC
* * ** * * * * * * ** * * *
10205 GAATTTTGA-TATTAAGGAAAAAAGG-CGAAA-TAAACGATTTCCATGCAAAAGAAAATCGTGAA
63 AAACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAAC-ATTTTCTTGCGAAACCAAAGCATCAA
* *
10267 TATCATTTATCCTAATG-AGGAAAATGTGTTTATAG-
124 TATCATGTATCCTAA-GAAGG-GAATGTGTTT-TAGC
* ** * * * ** * * * ** * *
10302 TACCTAATCACAAAAAGAATGAAGATCACTACAAGAATCCTCATTTCTCCCATTTGAG-GCACGA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAG-ACAA
* * * * *
10366 ACTTAGACTTTA-CAAAAATTGGT-GACAAGAAAGC-CTTTCTTACGAAACCAAAGAATCAATAT
65 ACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAAACATTTTCTTGCGAAACCAAAGCATCAATAT
** ** * ** *
10428 TGTGTATCCTGATGAGAAGACAAAGT-TGAT-GG
127 CATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
* * * ** * * ***
10460 TGCCTAATCATGAAACGAATGGGGACTAGCATGACAATTCGTGCCTGTCTTATTTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * *
10525 CCTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATGTCAT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCAT
10590 GTATCCTAATGAAGGGAATGTGTTCTTAGC
130 GTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * *
10620 T-CCCAATC-TCG-AAAGAATGGAAACTCTTACGAGAA-TC-TATGCTTGTCATAATTATAATAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTC-TTATT-TAAGA-
** * *** * * * * * * ** * * *
10680 G--ATTCTTGA-TATTAAGGAAAATAGTGCAAAGAAAAGATTTCCATGCAAAAGAAAATCGTGAA
60 GACAAACTTTACT-TTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAA
* *
10742 TATCGTTTATCCTAA-AGAGGAGAATGTGTTTATAG-
124 TATCATGTATCCTAAGA-AGG-GAATGTGTTT-TAGC
** * * * * * * *
10777 TGCCTAATCACAAAAAGAATGAAGATCATTACT-AGAATCCTCATTTGTCTCATTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* * * ** * * *
10840 AACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCGTACGAAACCAAAGAATCAATAT
64 AACTT-TACTTTATCAAAAA-TGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATAT
* ** * * *
10903 CATGTATCTTTATGAGAAGACAAAGT-TTAT-GG
127 CATGTATC-CTA--AGAAGGGAATGTGTTTTAGC
* ** *
10935 TGCCTAATCATGAAAAGAATGGGGATTAGCATGA-CATTCTTATTTGTCTTA-TTAAGAGACAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * * *
10998 C-TTACTTCT-TCAAAAACGGTGGAAAGAAAACATTTTTCTTACGACACCAAAGCATCAATGTCA
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACA-TTTTCTTGCGAAACCAAAGCATCAATATCA
11061 TGTATCCTAACGAAGGGAATGT-TTCTTAGC
129 TGTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * *
11091 T-CCTAATCTTGAAAAGAATGGAGACTCTTAGGAGAA-TC-GATGCTTGTCATAATTT--GGGAT
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTC-TTATTTAAGAGAC
* * ** * * * * * * * ** * * *
11151 GAATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGT-GAT
63 AAACTTT-ACT-TT-ATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAAT
* *
11213 ATCAT-TTTCCTATG-AGGAGAATGTGTTTATAG-
125 ATCATGTATCCTAAGAAGG-GAATGTGTTT-TAGC
* ** * * * * * * * ** *
11245 TCCCTAATCACAAAAAGAATGAAGATCACTA-CAGAATCCTCATTTCTCCCATTT--GAGGCATG
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACA--
* * * * * * *
11307 AACTTAGAC-TTA-CAAAAATTGGT-GACAAG-AAAC-CTTACGTACTAAACCAAAGAATCAATA
64 AACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAAACATTTTCTTGCGAAACCAAAGCATCAATA
* ** * ** *
11367 TCGTGTATCCTGATGAGAAGACAAAGT-TGAT-GG
126 TCATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
* * * * ** * ** *
11400 TTCCTAATCATG-AACGAATGGGGACTAGCATGACAA-TCATGGTTT-TCTTATGTAAGAGACAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTC-TTATTTGTCTTATTTAAGAGACAA
* * *
11462 ACTTTACTTCTATCAAAAATGGTGGAAAGAATACATTTTTCTTGCG-ACCCAAAGCATCAATGTC
65 ACTTTACTT-TATCAAAAATGGTGGAAAGAAAACA-TTTTCTTGCGAAACCAAAGCATCAATATC
* *
11526 ATGTTTCCTAATGAAGGGAATGTGTTCTAGC
128 ATGTATCCTAA-GAAGGGAATGTGTTTTAGC
* * * * * * * * * *
11557 T-CCCAATC-TCGAAAAG-ATGGAGACTCTTACGAGAA-TC-GATGCTTGTCATAATTATGGGAT
1 TGCCTAATCAT-GAAAAGAATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGAC
* * *** * * * * * * * ** * * *
11617 GAATTTTGA-TATTAAGTAAAATAGCGCAAAGAAAAAGATTTCCATGCAAAAGAAAATCGTGAAT
63 AAACTTT-ACT-TTATCAAAAATGGTGGAAAG-AAAACATTTTCTTGCGAAACCAAAGCATCAAT
* *
11681 ATCGTTTATTCCTAA-AGAGGAGAATGTGTTTATAG-
125 ATCATGTA-TCCTAAGA-AGG-GAATGTGTTT-TAGC
** * * * * * *
11716 TGCCTAATCACAAAAAGAAT-GAGATCATTACT-AGAATCCTCATTTGTCTCATTTGAG-GCACG
1 TGCCTAATCATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-ACA
* ** * ** * *
11778 AACTTAGACTTTA-CAAAAATTGGT-GACTGGAAACCCTTTCTTACGAAACCAAAGAATCAATAT
64 AACTT-TACTTTATCAAAAA-TGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATAT
* ** * **
11841 CGTGTATCCTGATGAGAAGACAAAGT-TAAT-G-
127 CATGTATCCT-A--AGAAGGGAATGTGTTTTAGC
* ** * * *
11872 TGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATACTTTTTTTGTCTTATTT-AGAGACAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTC-TTATTTGTCTTATTTAAGAGACAA
* * *
11936 ACTTTACTTCCATCAAAAATGGTGGAAAGAAAACATTATTCTTGCGACACCAAAAGCATCAATGT
65 ACTTTACTT-TATCAAAAATGGTGGAAAGAAAACATT-TTCTTGCGAAACC-AAAGCATCAATAT
* *
12001 CATGTTTCCTAATGAAGTGAATGTGTTCTTAGC
127 CATGTATCCTAA-GAAGGGAATGTGTT-TTAGC
* * * * * * * * *
12034 T-CCCAATC-TCAAAAAGAGATGGAGACTCTTATGAGAA-TC-GATGCTTGTCATAATTATGGGA
1 TGCCTAATCAT-GAAAAGA-ATGGAGATTATTATGAGAATTCTTAT--TTGTCTTATTTAAGAGA
** * ** * * * * * * ** * * *
12095 TGAATTTTGA-TATTA-GGAAAATAGCGCAAAGAAAAGATTTTCCATGCAAAAGAAAATCGTGAA
62 CAAACTTT-ACT-TTATCAAAAATGGTGGAAAGAAAACATTTT-CTTGCGAAACCAAAGCATCAA
* *
12158 TATCGTTTATCCTAA-AGAGGAGAATGTGTTTATAG-
124 TATCATGTATCCTAAGA-AGG-GAATGTGTTT-TAGC
* * * * * * * *
12193 TGGCCTAATCCA-CAAAAGAATGAAGATCA-TACTAAGAATCCTCA-TTGTCTCATTTGAG-GCA
1 T-GCCTAAT-CATGAAAAGAATGGAGATTATTA-TGAGAATTCTTATTTGTCTTATTTAAGAG-A
* * * * * * *
12254 CGAACTTAGACTTTA-CAAAAATTGGT-GACAAGAAAGC-CTTTC-TACGAAACCAAAGAACCAA
62 CAAACTT-TACTTTATCAAAAA-TGGTGGA-AAGAAAACATTTTCTTGCGAAACCAAAGCATCAA
* * * ** * * *
12315 TGTCGTGTTTCCTTATGAGAAGACAAAGT-TTAT-GG
124 TATCATGTATCC-TA--AGAAGGGAATGTGTTTTAGC
* ** * *
12350 TGCCTAATCATGAAAAGAATGGGGATTAGCATGACAATTCTTATTTGTCTTATTTAAGAGATAAA
1 TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
* * *
12415 CTTTACTTCTATCAAAAACGGTGGACAGAAAACATTTTTCTTTGCGACAA-CAAAGCATCAATGT
66 CTTTACTT-TATCAAAAATGGTGGAAAGAAAACA-TTTTC-TTGCGA-AACCAAAGCATCAATAT
*
12479 CATGTATCCTAATGAAGGGAATGTGTTCTTAAC
127 CATGTATCCTAA-GAAGGGAATGTGTT-TTAGC
*
12512 T-CCTAATC-TCGAAAGGAATGG
1 TGCCTAATCAT-GAAAAGAATGG
12533 CGACTCTTAC
Statistics
Matches: 8450, Mismatches: 2909, Indels: 2006
0.63 0.22 0.15
Matches are distributed among these distances:
149 3 0.00
150 8 0.00
151 12 0.00
152 69 0.01
153 62 0.01
154 154 0.02
155 297 0.04
156 501 0.06
157 1188 0.14
158 2525 0.30
159 2344 0.28
160 647 0.08
161 257 0.03
162 177 0.02
163 114 0.01
164 49 0.01
165 29 0.00
166 14 0.00
ACGTcount: A:0.37, C:0.16, G:0.18, T:0.29
Consensus pattern (157 bp):
TGCCTAATCATGAAAAGAATGGAGATTATTATGAGAATTCTTATTTGTCTTATTTAAGAGACAAA
CTTTACTTTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGAAACCAAAGCATCAATATCATG
TATCCTAAGAAGGGAATGTGTTTTAGC
Found at i:7234 original size:158 final size:156
Alignment explanation
Indices: 4658--9646 Score: 537
Period size: 159 Copynumber: 31.5 Consensus size: 156
4648 TTGAGGCACG
* * * * *
4658 AACTTAGACTTTA-CAAAAATTGGT-GACAAGAAAGCCTTTCTTACGAAACCAAAGAATCAATAT
1 AACTT-GACTTTATCAAAAA-CGGTGGA-AAGAAAACATTTCTTGCGAAACCAAAGCATCAATAT
* * * *
4721 TGTGTATCCTGATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAACGAATGGGGACTAGCATG
63 CGTGTATCCT-ATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCATG
* *** *
4786 ACAATTCGTGCCTGTCTTATTTAAGAGACA
127 ACAATTCTTATTTGTCTTATTTAAGAGGCA
* * *
4816 AACCTT-ACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATGT
1 AA-CTTGACTT-TATCAAAAACGGTGGAAAGAAAACA-TTTCTTGCGAAACCAAAGCATCAATAT
* * ** ** * * * * * **
4880 CATGTATCCTAATGA-AGGGA-ATGTGTTCTTAGCTTCCCAATC-TCGAAAAGAATGGAAACTCT
63 CGTGTATCCT-ATGAGA-AGACA-AAGTTGAT-GGTGCCTAATCAT-GAAAAGAATGGAGATTAG
* * * * * *
4942 TACGAGAA-TC-TATGCTTGTCATAATTATAATATG-A
123 CATGACAATTCTTAT--TTGTC-TTATT-TAAGAGGCA
** *** ** * * * * ** * * *
4977 TTCTTGA-TATTAAGGAAAATAGTGCAAAGAAAAGATTTCCATGCAAAAGAAAATCGTGAATATC
1 AACTTGACT-TTATCAAAAACGGTGGAAAGAAAACATTT-CTTGCGAAACCAAAGCATCAATATC
* * * ** * * ** * * **
5041 GTTTATCCTAAAGAGGAGA-ATGTGTTTATAGTGCCTAATCACAAAAAGAATGAAGATCATTACT
64 GTGTATCCT-ATGAGAAGACA-AAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA-T
* * * *
5105 -AGAATCCTCATTTGTCTCATTT--GAGGCA
126 GACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * * * * *
5133 CGAACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCGTACGAAACCAAAGAATCAAT
1 --AACTT-GACTTTATCAAAAA-CGGTGGA-AAGAAAACATTTCTTGCGAAACCAAAGCATCAAT
* * * *
5196 ATCATGTATCTTTATGAGAAGACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCA
61 ATCGTGTATC-CTATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA
*
5261 TGACAATTCTTATTTGTCTTATTTAAGAGACA
125 TGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * *
5293 AACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTACGACACCAAAGCATCAATGTC
1 AACTTGACTT-TATCAAAAACGGTGGAAAGAAAACA-TTTCTTGCGAAACCAAAGCATCAATATC
* ** * * ** * * ***
5358 ATGTATCCTA--ACGAAGGGAATG-TGTTCTTAGCTCCTAATCTTGAAAAGAATGGAGACTCTTA
64 GTGTATCCTATGA-GAAGACAAAGTTGATGGT-G--CCTAATCATGAAAAGAATGGAGATTAGCA
* * * * * *
5420 GGAGAA-TC-GATGCTTGTCATAATTATG-GG-A
125 TGACAATTCTTAT--TTGTCTTATTTAAGAGGCA
* ** * * * * * * ** * * *
5450 TGAATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGT-GA
1 --AA-CTTGACT-TT-ATCAAAAACGGTGGAAAGAAAACATTT-CTTGCGAAACCAAAGCATCAA
* * * * ** * * ** * *
5512 TATCATTTATCCTAAAGAGGAGA-ATGTGTTTATAGTGCCTAATCACAAAAAGAATGAAGATCA-
60 TATCGTGTATCCT-ATGAGAAGACA-AAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAG
** * * * * **
5575 CTACAAGAATCCTCATTTCTCCCA-TT-AGAGGCA
123 C-ATGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * * * * *
5608 CGAACTTAGACTTTA-CAAAAATTGGT-GACAAGAAAGCCTTACTTACTAAACCAAAGAATCAAT
1 --AACTT-GACTTTATCAAAAA-CGGTGGA-AAGAAAACATTTCTTGCGAAACCAAAGCATCAAT
* * *
5671 ATCGTGTATCCTGATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAACGAATGGGGACTAGCA
61 ATCGTGTATCCT-ATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA
* ** *
5736 TGACAATTCATGCTTGTCTTATTTAAGAGACA
125 TGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * * *
5768 AACTTTACTTCTATCAAAAATGGTGGAAAGAATACATTTTCTTGCGACACCAAAGCATCAATGTC
1 AACTTGACTT-TATCAAAAACGGTGGAAAGAAAACA-TTTCTTGCGAAACCAAAGCATCAATATC
* * ** * * ** * * ***
5833 ATGTTTCCTA--ATGAAGGGAATG-TGTTCTTAGCTCCCAATC-TCGAAAAGAATGGAGACTCTT
64 GTGTATCCTATGA-GAAGACAAAGTTGATGGT-G--CCTAATCAT-GAAAAGAATGGAGATTAGC
* * * * * *
5894 ACGAGAA-TC-TATGCTTGTCATAAATATAATATG-A
124 ATGACAATTCTTAT--TTGTC-T-TATTTAAGAGGCA
* *** ** * * * * ** * *
5928 ATCTTGA-TATTAAGGAAAATAGTGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATGAATATC
1 AACTTGACT-TTATCAAAAACGGTGGAAAGAAAACATTT-CTTGCGAAACCAAAGCATCAATATC
* * * ** * * * * * **
5992 GTTTATCCTAAAGAGGAGA-ATGTGTTTATAGTGCCTAATCA-CAAAAGAATGAAGATCATTACT
64 GTGTATCCT-ATGAGAAGACA-AAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA-T
* * * *
6055 -AGAATCCTCATTTGTCTCATTT--GAGGCA
126 GACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * * * * *
6083 CGAACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCGTACGAAACCAAAGAATCAAT
1 --AACTT-GACTTTATCAAAAA-CGGTGGA-AAGAAAACATTTCTTGCGAAACCAAAGCATCAAT
*
6146 ATCGTGTATCCTGATGAGAAGACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA
61 ATCGTGTATCCT-ATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA
**
6211 TGACAATTCTTATTTGTCTTATTTAAGAGATA
125 TGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * *
6243 AACTTTACTTCTATCAAAAACGGTGGACAGAAAACATTTTCTTGCGACAA-CAAAGCATCAATGT
1 AACTTGACTT-TATCAAAAACGGTGGAAAGAAAACA-TTTCTTGCGA-AACCAAAGCATCAATAT
* ** * * ** * **
6307 CATGTATCCTA--ATGAAGGGAATG-TGTTCTTAGCTCCTAATC-TCGAAAAGAATGGAGACTCT
63 CGTGTATCCTATGA-GAAGACAAAGTTGATGGT-G--CCTAATCAT-GAAAAGAATGGAGATTAG
* * * * * * * *
6368 TACGAGAA-TC-GATGGTTGTCATAATTATG-GGATA
123 CATGACAATTCTTAT--TTGTCTTATTTAAGAGG-CA
* ** * * * * * * ** * *
6402 AATTTTGA-TATTAAGGAAAAAAGG-GAAAATAAAAGATTTCCATGCAAAAGAAAATCATGAATA
1 AA-CTTGACT-TT-ATCAAAAACGGTGGAAAGAAAACATTT-CTTGCGAAACCAAAGCATCAATA
* * * * * * * * ** *
6465 TCATTTATCCTA--AAAAGGAGAATGTGTTTATAGTACCTAATCACAAAAAGAATGAAGA-TA--
62 TCGTGTATCCTATGAGAA-GACAA--AGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGC
* * * *
6525 ATTACTAGGATCCTCACTTGTCTTATTT--GAGGCA
124 ATGAC-A--ATTCTTATTTGTCTTATTTAAGAGGCA
* * * * * *
6559 CGAACTTAGATTTTA-CAAAAATTGGT-GACAAG-AAGCCTTTCTTACGAAACCAAAGAATCAAT
1 --AACTT-GACTTTATCAAAAA-CGGTGGA-AAGAAAACATTTCTTGCGAAACCAAAGCATCAAT
* * * * *
6621 ATCGTGTATCCTTATGAGAAAACAAAGTTGATGGAGCCTAATCATGAAACGAATGGGGACTAGCA
61 ATCGTGTATCC-TATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA
* *** *
6686 TGACAATTCATGCCTGTCTTATTTAAGAGACA
125 TGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * * **
6718 AACTTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGTGACACCAAAGCATCAATGCC
1 AACTTGACTT-TATCAAAAACGGTGGAAAGAAAACA-TTTCTTGCGAAACCAAAGCATCAATATC
* * * * * * ** * * * ***
6783 ATGTTTCCTAATGA-ACG-GAATG-TGTTCTTAGCTCCCAATC-TCGAAATGAATGGAGACTCTT
64 GTGTATCCT-ATGAGAAGACAAAGTTGATGGT-G--CCTAATCAT-GAAAAGAATGGAGATTAGC
* * * * * * *
6844 AGGAGAA-TC-GATGCTTGTCATAATTATGGTATG-A
124 ATGACAATTCTTAT--TTGTCTTATTTA-AG-AGGCA
** ** * * * * * * ** * * *
6878 ATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGTGAATAT
1 AACTTGACT-TT-ATCAAAAACGGTGGAAAGAAAACATTT-CTTGCGAAACCAAAGCATCAATAT
* * * * * * * ** * * **
6941 CGTTTATCCTA-AAGAGGAGAATGCTTTTATAGTGCCTAATCACAAAAAGAATGAAGATCATTAC
63 CGTGTATCCTATGAGAAGACAAAG--TTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA-
* * * *
7005 T-AGAATCCTCATTTGTCTCATTT--GAGGCA
125 TGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * * * *
7034 CGAACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCTTACGAAACCAAAGAATCAAT
1 --AACTT-GACTTTATCAAAAA-CGGTGGA-AAGAAAACATTTCTTGCGAAACCAAAGCATCAAT
*
7097 ATCGTGTATCCTGATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGGGATTAGCA
61 ATCGTGTATCCT-ATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA
7162 TGACAATTCTTATTTGTCTTATTTAAGAGGCA
125 TGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * *
7194 AACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTCTTGCGACACCAAAGCATCAATGTCA
1 AACTTGACTT-TATCAAAAACGGTGGAAAGAAAACATTTCTTGCGAAACCAAAGCATCAATATCG
* ** * * ** * *** *
7259 TGTATCCTAAG-GAAGGGAATG-TGTTCTTAGCTCCTAATC-TCGAAAAGAATGGAGACTCTTAG
65 TGTATCCTATGAGAAGACAAAGTTGATGGT-G--CCTAATCAT-GAAAAGAATGGAGATTAGCAT
* * * * *
7321 GAGAA-TC-GATGGTTGTCATAATTATAATATG-A
126 GACAATTCTTAT--TTGTC-TTATT-TAAGAGGCA
* *** ** * * * ** * *
7353 ATCTTGA-TATTAAGGAAAATAGTGCAAAGAAAAGC-TTTCCATGCAAAAGAAAATCATGAATAT
1 AACTTGACT-TTATCAAAAACGGTGGAAAGAAAA-CATTT-CTTGCGAAACCAAAGCATCAATAT
* * * * * * ** * * **
7416 CGTTTATCCTA-AAGAAGAGAATGTGTTTATAGTGCCTAATCACAAAAAGAATGAAGATCATTAC
63 CGTGTATCCTATGAGAAGACAA--AGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA-
* * * *
7480 T-AGAATCCTCATTTGTCTCATTT--GAGGCA
125 TGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * * * *
7509 CGAACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCTTACGAAACCAAAGAATCAAT
1 --AACTT-GACTTTATCAAAAA-CGGTGGA-AAGAAAACATTTCTTGCGAAACCAAAGCATCAAT
*
7572 ATCGTGTATCCTGATGAGAAGAC-AAGTTGATGGTGCCTAATCATGAAAAGAATGGGGATTAGCA
61 ATCGTGTATCCT-ATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA
7636 TGACAATTCTTATTTGTCTTATTTAAGAGGCA
125 TGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * *
7668 AACTTTACTTCTATTAAAAACGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATGTC
1 AACTTGACTT-TATCAAAAACGGTGGAAAGAAAACA-TTTCTTGCGAAACCAAAGCATCAATATC
* * ** * * ** * ***
7733 ATGTATCCTAAG-GAAGGGAATG-TGTTCTTTGCTCCTAATC-TCGAAAAGAATGGAGACTCTTA
64 GTGTATCCTATGAGAAGACAAAGTTGAT-GGTG--CCTAATCAT-GAAAAGAATGGAGATTAGCA
* * * * * *
7795 GGAGAA-TC-GATGCTTGTCATAATTATG-GG-A
125 TGACAATTCTTAT--TTGTCTTATTTAAGAGGCA
* ** * * * * * * ** * * *
7825 TGAATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGTGAA
1 --AA-CTTGACT-TT-ATCAAAAACGGTGGAAAGAAAACATTT-CTTGCGAAACCAAAGCATCAA
* * * ** * * * ** *
7888 TATCATTTATCCTAATGAGGAGA-ATGTGTTTATAGTACCTAATCACAAAAAGAATGAAGATCAC
60 TATCGTGTATCCT-ATGAGAAGACA-AAGTTGATGGTGCCTAATCATGAAAAGAATGGAGAT---
* * * * ** *
7952 TA-CA-G-GAATCCTCATTTCTCCCATTT--GAGGTACG
120 TAGCATGACAATTCTTATTTGTCTTATTTAAGAGG--CA
* * * * ** *
7986 AACTTAGACTTTA-CAAAAAATGGTGGCAAGAAAGCCTTTCTTATGAAATCAAAGCATCAATATC
1 AACTT-GACTTTATC-AAAAACGGTGGAAAGAAAACATTTCTTGCGAAACCAAAGCATCAATATC
* * *
8050 GTGTATCCTTATGAGAAGACAAAATTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCATGA
64 GTGTATCC-TATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCATGA
* * *
8115 CAATACTTTTTTTGTCTTATTTAAGAGACA
128 CAATTC-TTATTTGTCTTATTTAAGAGGCA
* * * * *
8145 AACTTTACATCTATC-AAATCTGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATGT
1 AACTTGAC-TTTATCAAAAAC-GGTGGAAAGAAAACA-TTTCTTGCGAAACCAAAGCATCAATAT
* * ** * * ** * * **
8209 CATGTTTCCTA--ATGAAGGGAATG-TGTTCTTAGCTCCCAATC-TCGAAAAGAATGGAGACTCT
63 CGTGTATCCTATGA-GAAGACAAAGTTGATGGT-G--CCTAATCAT-GAAAAGAATGGAGATTAG
* * * * * * *
8270 TAGGAGAA-TC-TATGCTTTTCATAATTATAATATG-A
123 CATGACAATTCTTAT--TTGTC-TTATT-TAAGAGGCA
** *** ** * * * * * ** * * *
8305 ATTTTGA-TATTAAGGAAAATAGCGCAAAGAAAAGATTTCCATGCAAAAGAAAATCGTGAATATC
1 AACTTGACT-TTATCAAAAACGGTGGAAAGAAAACATTT-CTTGCGAAACCAAAGCATCAATATC
* * * ** * * ** * * **
8369 GTTTATCCTAAAGAGGAGA-ATGTGTTTATAGTGCCTAATCACAAAAAGAATGAAGATCATTACT
64 GTGTATCCT-ATGAGAAGACA-AAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA-T
* ** * *
8433 -AGAACCCTTAATTGTCTCATTT--GAGGCA
126 GACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * * * * *
8461 GGAACTTAGACTTTA-CAAAAATTGGT-GACAGGAAACCCTTTCGTACGAAACCAAAGAATCAAT
1 --AACTT-GACTTTATCAAAAA-CGGTGGA-AAGAAAACATTTCTTGCGAAACCAAAGCATCAAT
* * * *
8524 ATCATGTATCTTTATGAGAAGACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCA
61 ATCGTGTATC-CTATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA
8589 TGACAATTCTTATTTGTCTTATTTAAG-GGTCA
125 TGACAATTCTTATTTGTCTTATTTAAGAGG-CA
* *
8621 AACTTTACTTCTATCAAAAACGGTGGAAAGAAAACATTTTCTTGCGACAA-CAAAGCATCAATGT
1 AACTTGACTT-TATCAAAAACGGTGGAAAGAAAACA-TTTCTTGCGA-AACCAAAGCATCAATAT
* * ** * * * * ***
8685 CATGTATCCTAAG-GAAGGGAATG-TGTTCGTAGCTCCTAATC-TCGAAAAGAATGGAGACTCTT
63 CGTGTATCCTATGAGAAGACAAAGTTGATGGT-G--CCTAATCAT-GAAAAGAATGGAGATTAGC
* * * * *
8747 AGGAGAA-TC-GATGCTTGTCTTAATTATG-GG-A
124 ATGACAATTCTTAT--TTGTCTTATTTAAGAGGCA
* ** * * * * * * ** * * *
8778 TGAATTTTGA-TATTAAGGAAAAAAGG-CGAAATAAAAGATTTCCATGCAAAAGAAAATCGTGAA
1 --AA-CTTGACT-TT-ATCAAAAACGGTGGAAAGAAAACATTT-CTTGCGAAACCAAAGCATCAA
* * * ** * * * ** * *
8841 TATCATTTATCCTAATGAGGAGA-ATGTGTTTATAGTCCCTAATCACAAAAAGAATGAAGATCA-
60 TATCGTGTATCCT-ATGAGAAGACA-AAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAG
** * * * * **
8904 CTACAAGAATCCTCATTTCTCCCATTT--GAGGCA
123 C-ATGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * * * * *
8937 CGAACTTAGACTATA-CAAAAATTGGT-GACAAGAAAGCCA-TACTTACTAAACCAAAGAATCAA
1 --AACTT-GACTTTATCAAAAA-CGGTGGA-AAGAAA-ACATTTCTTGCGAAACCAAAGCATCAA
* * *
8999 TATCGTGTATCCTGATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAACGAATGGGGACTAGC
60 TATCGTGTATCCT-ATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGC
* ** *
9064 ATGACAATTCATGCTTGTCTTATTTAAGAGACA
124 ATGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * *
9097 AACTTTACTTCTATCAAAAATGGTGGAAAGAAAACATTTTCTTGCGACACCAAAGCATCAATGTC
1 AACTTGACTT-TATCAAAAACGGTGGAAAGAAAACA-TTTCTTGCGAAACCAAAGCATCAATATC
* * ** * * ** * **
9162 ATGTTTCCTA--ATGAAGGGAATG-TGTTCTTAGCTCCCAATC-TCGAAAAGAATGGAG-TCTCT
64 GTGTATCCTATGA-GAAGACAAAGTTGATGGT-G--CCTAATCAT-GAAAAGAATGGAGAT-TAG
* * * * * * * *
9222 TACGAGAA-TC-GATGCTTGTCATAATTATGGATG-A
123 CATGACAATTCTTAT--TTGTCTTATTTA-AGAGGCA
** * *** ** * * * * * ** * * * *
9256 ATTTTG-TTATTAAGGAAAATAGCGCAAAGAAAAGATTTCCATGCAAAAAAAAATCGTGAATACC
1 AACTTGACT-TTATCAAAAACGGTGGAAAGAAAACATTT-CTTGCGAAACCAAAGCATCAATATC
* * * ** * * ** * * *
9320 GTTTATCCTAAAGAGGAGA-ATGTGTTTATTGTGCCTAATCACAAAAAGAATGAAGATCATCACT
64 GTGTATCCT-ATGAGAAGACA-AAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA-T
* * ** *
9384 -AGAATCCCCATTTGTCTCATTT--GAGGCA
126 GACAATTCTTATTTGTCTTATTTAAGAGGCA
* * * * * *
9412 CGAACTTAGACTTTA-CAAAAATTGGT-GACAAGAAAGCCTTTCTTACGAAACCAAAGAACCAAT
1 --AACTT-GACTTTATCAAAAA-CGGTGGA-AAGAAAACATTTCTTGCGAAACCAAAGCATCAAT
* * * *
9475 GTCGTGTTTCCTTATGAGAAGACAAAGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGCA
61 ATCGTGTATCC-TATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCA
**
9540 TGACAATTCTTATTTGTCTTATTTAAGAGATA
125 TGACAATTCTTATTTGTCTTATTTAAGAGGCA
* * *
9572 AACTTTACTTCTATCAAAAACGGTGGACAGAAAACATTTTCTTGCGACAA-CAAAGCATCAATGT
1 AACTTGACTT-TATCAAAAACGGTGGAAAGAAAACA-TTTCTTGCGA-AACCAAAGCATCAATAT
*
9636 CATGTATCCTA
63 CGTGTATCCTA
9647 ATGAAGGGAA
Statistics
Matches: 3318, Mismatches: 1128, Indels: 770
0.64 0.22 0.15
Matches are distributed among these distances:
154 2 0.00
155 18 0.01
156 69 0.02
157 358 0.11
158 1151 0.35
159 1280 0.39
160 340 0.10
161 72 0.02
162 28 0.01
ACGTcount: A:0.37, C:0.16, G:0.18, T:0.29
Consensus pattern (156 bp):
AACTTGACTTTATCAAAAACGGTGGAAAGAAAACATTTCTTGCGAAACCAAAGCATCAATATCGT
GTATCCTATGAGAAGACAAAGTTGATGGTGCCTAATCATGAAAAGAATGGAGATTAGCATGACAA
TTCTTATTTGTCTTATTTAAGAGGCA
Done.