Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold274
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 1642345
ACGTcount: A:0.32, C:0.17, G:0.17, T:0.32
Warning! 31972 characters in sequence are not A, C, G, or T
File 10 of 10
Found at i:1531218 original size:96 final size:98
Alignment explanation
Indices: 1530977--1531530 Score: 805
Period size: 96 Copynumber: 5.8 Consensus size: 98
1530967 TCACCCTTTT
* *
1530977 TAAAGCCCACACAAGTCGGTGGCAAACCTTCTCTAAAGCCCACAGAAGTCGGTGGCAAACCTTC-
1 TAAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGGC-AACCTTCT
* * *
1531041 TCTAAAGCCCACACAGGTTGGTGGCAAACCTTCTC
65 TCTAAAGCCCACACAAGTCGGTGGC-AACCCTCTC
* *
1531076 TAAAGCCCACACAAGTCGGTGGCAAACCTTCTCTAAAGCCCGCACAAGTCGGTGGCAACCTTCTT
1 TAAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGGCAACCTTCTT
* *
1531141 CTAAAGCCTACACATGTCGGTGGCAA-CCT-TC
66 CTAAAGCCCACACAAGTCGGTGGCAACCCTCTC
*
1531172 TAAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGCCAA-C--CTT
1 TAAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGGCAACCTTCTT
1531234 CTAAAGCCCACACAAGTCGGTGGCAACCCTTCTC
66 CTAAAGCCCACACAAGTCGGTGGCAACCC-TCTC
1531268 TAAAGCCCACACAAGTCGGTGGCAA-CC-T-TCTAAAGCCCACACAAGTCGGTGGCAACC--CTT
1 TAAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGGCAACCTTCTT
1531328 CTCAAAGCCCACACAAGTCGGTGGCAACCCTCTC
66 CT-AAAGCCCACACAAGTCGGTGGCAACCCTCTC
* *
1531362 TAAAGCCCACACAAGTCGGTGGCAACCTTTTTC-AAAGCCCACACAAGTCGGTGGCAACCTTCTT
1 TAAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGGCAACCTTCTT
*
1531426 CTAAAGCCTACACAAGTCGGTGGCAACCCTCTC
66 CTAAAGCCCACACAAGTCGGTGGCAACCCTCTC
* * * * *
1531459 TAAAGCCCACACAATTTGGTGACAACCATTCTCTAAAGCCCACACAAGTCAGTGGCAACC--CTT
1 TAAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGGCAACCTTCTT
1531522 CT-AAGCCCA
66 CTAAAGCCCA
1531531 ATATAGCTGG
Statistics
Matches: 422, Mismatches: 21, Indels: 28
0.90 0.04 0.06
Matches are distributed among these distances:
93 53 0.13
94 38 0.09
95 38 0.09
96 116 0.27
97 62 0.15
98 39 0.09
99 76 0.18
ACGTcount: A:0.29, C:0.34, G:0.18, T:0.19
Consensus pattern (98 bp):
TAAAGCCCACACAAGTCGGTGGCAACCCTTCTCTAAAGCCCACACAAGTCGGTGGCAACCTTCTT
CTAAAGCCCACACAAGTCGGTGGCAACCCTCTC
Found at i:1531632 original size:43 final size:43
Alignment explanation
Indices: 1531569--1531842 Score: 332
Period size: 43 Copynumber: 6.1 Consensus size: 43
1531559 GCACCTTCTT
* *
1531569 CTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGTAC
1 CTTTAAGTCCAATATAGCTGGCCTTGAATCAGCACATTGGCAC
* * * * *
1531612 CTTTAAGTCTAATATCGCTGGCCTTGAATTAGCATATTAGCACCTTC
1 CTTTAAGTCCAATATAGCTGGCCTTGAATCAGCACATTGGCA----C
*
1531659 ATCTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCAC
1 --CTTTAAGTCCAATATAGCTGGCCTTGAATCAGCACATTGGCAC
* *
1531704 CTTTAAGTCCAATATCGCTGGCCTTGAATCAGCATATTGGCACCTTC
1 CTTTAAGTCCAATATAGCTGGCCTTGAATCAGCACATTGGCA----C
*
1531751 TTCTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCAC
1 --CTTTAAGTCCAATATAGCTGGCCTTGAATCAGCACATTGGCAC
*
1531796 CTTTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCAC
1 CTTTAAGTCCAATATAGCTGGCCTTGAATCAGCACATTGGCAC
1531839 CTTT
1 CTTT
1531843 TCCATCTTTA
Statistics
Matches: 198, Mismatches: 21, Indels: 24
0.81 0.09 0.10
Matches are distributed among these distances:
43 119 0.60
45 2 0.01
47 2 0.01
49 75 0.38
ACGTcount: A:0.25, C:0.24, G:0.18, T:0.32
Consensus pattern (43 bp):
CTTTAAGTCCAATATAGCTGGCCTTGAATCAGCACATTGGCAC
Found at i:1531687 original size:92 final size:92
Alignment explanation
Indices: 1531518--1531895 Score: 596
Period size: 92 Copynumber: 4.1 Consensus size: 92
1531508 CAGTGGCAAC
* *
1531518 CCTTCTAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTCTTCTTTAAGTCCAATG
1 CCTT-TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTTAAGTCCAATG
*
1531583 TAGCTGGCCTTGAATCAGCACATTGGTA
65 TAGCTGGCCTTGAATCAGCACATTGGCA
* * * *
1531611 CCTTTAAGTCTAATATCGCTGGCCTTGAATTAGCATATTAGCACCTTCATCTTTAAGTCCAATGT
1 CCTTTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTTAAGTCCAATGT
1531676 AGCTGGCCTTGAATCAGCACATTGGCA
66 AGCTGGCCTTGAATCAGCACATTGGCA
* *
1531703 CCTTTAAGTCCAATATCGCTGGCCTTGAATCAGCATATTGGCACCTTCTTCTTTAAGTCCAATGT
1 CCTTTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTTAAGTCCAATGT
1531768 AGCTGGCCTTGAATCAGCACATTGGCA
66 AGCTGGCCTTGAATCAGCACATTGGCA
1531795 CCTTTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTTCCATCTTTAAG-CTCA
1 CCTTTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACC--TT-CATCTTTAAGTC-CA
* *
1531859 ATGTAGCTGGCCTTGAATTAGCACATTGACA
62 ATGTAGCTGGCCTTGAATCAGCACATTGGCA
1531890 TCCTTT
1 -CCTTT
1531896 TTCTCATCTT
Statistics
Matches: 265, Mismatches: 15, Indels: 7
0.92 0.05 0.02
Matches are distributed among these distances:
92 213 0.80
93 4 0.02
94 3 0.01
95 40 0.15
96 5 0.02
ACGTcount: A:0.25, C:0.25, G:0.17, T:0.33
Consensus pattern (92 bp):
CCTTTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTTAAGTCCAATGT
AGCTGGCCTTGAATCAGCACATTGGCA
Found at i:1531874 original size:52 final size:53
Alignment explanation
Indices: 1531796--1531949 Score: 177
Period size: 52 Copynumber: 2.9 Consensus size: 53
1531786 ACATTGGCAC
1531796 CTTTAAG-TCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTTC-CAT
1 CTTTAAGCT-CAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTTCTCAT
* * * *
1531848 CTTTAAGCTCAATGTAGCTGGCCTTGAATTAGCACATTGACATCCTTTTTCTCAT
1 CTTTAAGCTCAATATAGCTGGCCTTGAATCAGCATATTGGCA-CC-TTTTCTCAT
* * * * * *
1531903 CTTTAAGCCCAATATCGTTGGCCGTGAATCAACATATTGGCATCTTT
1 CTTTAAGCTCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTT
1531950 ATCACTTTTC
Statistics
Matches: 84, Mismatches: 14, Indels: 7
0.80 0.13 0.07
Matches are distributed among these distances:
52 36 0.43
53 6 0.07
54 6 0.07
55 36 0.43
ACGTcount: A:0.25, C:0.24, G:0.16, T:0.36
Consensus pattern (53 bp):
CTTTAAGCTCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTTCTCAT
Found at i:1532101 original size:169 final size:173
Alignment explanation
Indices: 1531796--1532182 Score: 468
Period size: 169 Copynumber: 2.2 Consensus size: 173
1531786 ACATTGGCAC
* *
1531796 CTTTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTTCCATCTTTAAGCTCAAT
1 CTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTTT-CATCTTTAAGCTCAAT
* * *
1531861 GTAGCTGGCCTTGAATTAGCACATTGACATCCTTTTTCTCATCTTTAAGCCCAATATCGTTGGCC
65 ATAGCTAGCC-TGAATTAGCACATTGACATCCTTTTTCTCATCTTTAAACCCAATATCGTTGGCC
*
1531926 GTGAATCAACATATTGG-CATCTTTATCACTTTTC-TCATCT-TCAT
129 GTGAATCAACATATTGGTCAT-TTTATCACTCTTCATCAT-TATCAT
*
1531970 CTTTAAGTCCAATGTCGCTGGCCTTGAATCAGCACATTGGCACC-TTT-ATCTTTAAG-TCCAAT
1 CTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTTTCATCTTTAAGCT-CAAT
* * * **
1532032 ATCGCTAGCC-GCATATTGGCTC-TT-TTATCCTTTTTCTCATCTTTAAACCCAATATCGTTGGC
65 ATAGCTAGCCTG-A-ATTAGCACATTGACATCCTTTTTCTCATCTTTAAACCCAATATCGTTGGC
* *
1532094 CGTGAATCAACATATTGGTCCTTTTATCACTCTTCATCCTTATCAT
128 CGTGAATCAACATATTGGTCATTTTATCACTCTTCATCATTATCAT
* * * * * *
1532140 CTTTAAGTCCAGTGTGGCAGGTCTTGAATCTGCACAGTGGCAC
1 CTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCAC
1532183 ATTGCAAAAC
Statistics
Matches: 187, Mismatches: 20, Indels: 16
0.84 0.09 0.07
Matches are distributed among these distances:
169 67 0.36
170 50 0.27
171 26 0.14
173 3 0.02
174 41 0.22
ACGTcount: A:0.23, C:0.25, G:0.15, T:0.37
Consensus pattern (173 bp):
CTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTTTCATCTTTAAGCTCAATA
TAGCTAGCCTGAATTAGCACATTGACATCCTTTTTCTCATCTTTAAACCCAATATCGTTGGCCGT
GAATCAACATATTGGTCATTTTATCACTCTTCATCATTATCAT
Found at i:1532800 original size:13 final size:13
Alignment explanation
Indices: 1532782--1532806 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
1532772 CATAAAGTAT
1532782 TGTATCGATACAA
1 TGTATCGATACAA
1532795 TGTATCGATACA
1 TGTATCGATACA
1532807 TAAGTGTTGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:1532822 original size:32 final size:33
Alignment explanation
Indices: 1532762--1532830 Score: 122
Period size: 32 Copynumber: 2.1 Consensus size: 33
1532752 TTCAACAATT
1532762 TGTATCGATACATAAAGTATTGTATCGATACAA
1 TGTATCGATACATAAAGTATTGTATCGATACAA
*
1532795 TGTATCGATACAT-AAGTGTTGTATCGATACAA
1 TGTATCGATACATAAAGTATTGTATCGATACAA
1532827 TGTA
1 TGTA
1532831 AGCTACTGCC
Statistics
Matches: 35, Mismatches: 1, Indels: 1
0.95 0.03 0.03
Matches are distributed among these distances:
32 22 0.63
33 13 0.37
ACGTcount: A:0.36, C:0.12, G:0.17, T:0.35
Consensus pattern (33 bp):
TGTATCGATACATAAAGTATTGTATCGATACAA
Found at i:1532886 original size:13 final size:13
Alignment explanation
Indices: 1532868--1532892 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
1532858 ATTACTCAAA
1532868 TGTATCGATACAT
1 TGTATCGATACAT
1532881 TGTATCGATACA
1 TGTATCGATACA
1532893 CTGATCTTTG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:1532945 original size:52 final size:52
Alignment explanation
Indices: 1532901--1533028 Score: 220
Period size: 52 Copynumber: 2.5 Consensus size: 52
1532891 CACTGATCTT
*
1532901 TGTATCGATACATGCAGGCAAATTTGCCCAGATGTATCGATACACTATAAAA
1 TGTATCGATACATGCAGGCAAATTTGCCCAAATGTATCGATACACTATAAAA
* * *
1532953 TGTATTGATACATGTAGGCAAATTTGCCCAAATGTATCGATACACTATGAAA
1 TGTATCGATACATGCAGGCAAATTTGCCCAAATGTATCGATACACTATAAAA
1533005 TGTATCGATACATGCAGGCAAATT
1 TGTATCGATACATGCAGGCAAATT
1533029 CTCATATTTC
Statistics
Matches: 70, Mismatches: 6, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
52 70 1.00
ACGTcount: A:0.36, C:0.17, G:0.18, T:0.29
Consensus pattern (52 bp):
TGTATCGATACATGCAGGCAAATTTGCCCAAATGTATCGATACACTATAAAA
Found at i:1537628 original size:475 final size:476
Alignment explanation
Indices: 1536823--1539015 Score: 2706
Period size: 475 Copynumber: 4.6 Consensus size: 476
1536813 GTATTTTGGC
* * * * *
1536823 TTCCCAATCTTGAAAAGAATAGAGACTATTAGGACAATCGATGCTTATCTTATTT-AAGGATGAA
1 TTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCGATGCTTGTCTTATTTAAAGGATGAA
* ** *
1536887 CTTAGATTTTAAGGAAAATAGGGCAAAGAATTGATTTCCACGC-AAA-AAAATCATCAATATCAT
66 CTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCAT
*
1536950 TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC-AAATGAATGAAGAT-TACTTCTAG
131 TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCT-TTTCTAG
* * * *
1537013 AATCTATA-TTTTACTCATTT-GAGGCACGAACTTAGACTTCACAAAAATTAGG-GGGAAAAAAG
195 AATCCA-AGTTTGACTCATTTAG-GGCACGAACTTAGACTTTACAAAAATT-GGTGGGAAGAAAG
* * * * ** *
1537075 TCGTTCTTGCAAAACCAAAGCATCAATGTTATGTATCTTAAT-AGGAAGACTATGTTTATGGTGC
257 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGA-GAAGACTATGTTTATGGTGC
*
1537139 CTAATCCTGAAAAGAATGGGAATTAGTTTGACTATTCATGTTTGTCTTATTTAAGAGACAATCTT
321 CTAATCCTGAAAAGAATGGGAATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAATCTT
* * *
1537204 TGAATCTATCAAAAACGATCGAAAGAAATGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTA
386 TGAATCTATCAAAAACGATGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
*
1537269 TCCTAATGAAAGGAATGTGTTTCTGG
451 TCCTAATGAAGGGAATGTGTTTCTGG
* *
1537295 TT-CCAATCTTGAAAAGAATGGAAACTGTTACGAGAATCGATGCTTGTCTTATTTAAAGGATAAA
1 TTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCGATGCTTGTCTTATTTAAAGGATGAA
* * *
1537359 CTTTAATTTTAAGAAAAATATGGCAAAGAAAAGATTTCCATGCAAAAGGAAAA-CATCAATATCA
66 CTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAA-GAAAATCATCAATATCA
* * * *
1537423 TTTATCTTAATGAGGAGAATATGTTTGTAGTGCCTAATCACAAAATGAATGCAA-ATCTTTTCTT
130 TTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG-AAGATCTTTTCTA
* *
1537487 GAATCCAAGCTTGACTCATTTAGGGCA-GAAACTTAAACTTTACAAAAATTGGTGGGAAGAAAGC
194 GAATCCAAGTTTGACTCATTTAGGGCACG-AACTTAGACTTTACAAAAATTGGTGGGAAGAAAGC
* * *
1537551 CTTTCTTGTGAAACCAAAGCATCAATATCTTGTATCCTAATGAGAAGACTATGTTTATGGTGCCG
258 CTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGTGCCT
* * * * **
1537616 AATCTTGAAAAGAATGGGGATTAGTAAGACTATTCATGTTTGTCTTATTTGAGAGATGATCTTTG
323 AATCCTGAAAAGAATGGGAATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAATCTTTG
* *
1537681 AATCTATCAAAAACGATGGAGAGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATC
388 AATCTATCAAAAACGATGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATC
**
1537746 CTAAACAAGGGAATGTGTTTCTGG
453 CTAATGAAGGGAATGTGTTTCTGG
* *
1537770 TTCCCAACCTTGAAAAGAATGGAGACTGTTACGAGAATCGATGCTTGTTTTATTTAAAGGATGAA
1 TTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCGATGCTTGTCTTATTTAAAGGATGAA
* * *
1537835 CTTTGATTTTAAGGAAAATATGGCTAAGAAAAGATTTCCATTCAAAAGAAAATCATCAATATCAT
66 CTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCAT
* * * * * * * *
1537900 CTATCCCAATGGGGAAAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGTTCATTACTAGA
131 TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTTCTAGA
* * * * * ** * * **
1537965 ATCCACGTTTGTCTCATTT-GAGGAATGAACTTAGACTGT-CAAAAAATTAATGAGAAAAAAGTG
196 ATCCAAGTTTGACTCATTTAG-GGCACGAACTTAGACTTTAC-AAAAATTGGTGGGAAGAAAGCC
* * *** *
1538028 TTTCTTGCGAAACCAAAGCATCAATAT-GATGTATCCTAATAAGAAGACTATGATTACATTACCT
259 TTTCTTGCGAAACCAAAGCATCAATATCG-TGTATCCTAATGAGAAGACTATGTTTATGGTGCCT
* * * * * * * * * * *
1538092 AATCCAGAAAGGAACGGGGATTAGTATGAGTGTTCTTGCTTGTCGTATTTAAGAGA-AGAACTTG
323 AATCCTGAAAAGAATGGGAATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACA-ATCTTT
* * * * * *
1538156 GATTCTATCAAAAACGGTAGAAAGAAAAGCTTTTTTTGTGACACCAAAGCATCAAAGTCATGT-T
387 GAATCTATCAAAAACGATGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTAT
*
1538220 TCTAATGAAGGGAATGTGTTT-TGG
452 CCTAATGAAGGGAATGTGTTTCTGG
* * * *
1538244 CTTCCTAATCTTGAAAGGAATGGAGATTGTTACGAGAAT-GATGCTTGTCTTATTTAAGGGATGA
1 -TTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCGATGCTTGTCTTATTTAAAGGATGA
* **
1538308 ACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCGCGCAAAAGAAAATCATCAATATCA
65 ACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCA
* ** *
1538373 TTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCACTACTAG
130 TTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTTCTAG
* * * * * * *
1538438 AATCCAAGCTTGACACATTTAAGGCATGCACTAAGACTTTACAAAAATTGGTAGGAAGAAAGCCT
195 AATCCAAGTTTGACTCATTTAGGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCT
* * * *
1538503 TTCTTGCCAAACCAAAGCATTAATATCGTGTATCCTAATGAGAACACTATGTTTATGGCT-CCAA
260 TTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGG-TGCCTA
* *
1538567 ATCCTGAAAAGAAT-GAAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACCATCTTTG
324 ATCCTGAAAAGAATGGGA-ATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAATCTTTG
* * * * * *
1538631 AATCTATCCAAAATGATGGAAAGAAAAGCTTTTTTTGCAACACCAAAGGATCAATGTTATGTATC
388 AATCTATCAAAAACGATGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATC
* * **
1538696 CAAATGAAGGGAATGTGCTTCTAA
453 CTAATGAAGGGAATGTGTTTCTGG
* * * *
1538720 TTCCCCACCTTGAAAAGAATAGAGACTGTTACGAGAATTGATGCTTGTCTTATTT-AAGGATGAA
1 TTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCGATGCTTGTCTTATTTAAAGGATGAA
* * *
1538784 CCTTGATATTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCAT
66 CTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCAT
* * * * * * *
1538849 TTATCCTAATAAGGAAAATGTGTTTGTATTGCCTAGTCACAAAATAAAAGAAGATCATTTT-TAG
131 TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC-TTTTCTAG
* * **
1538913 AATCCATGTTTGACTCATTTAAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAATTCCT
195 AATCCAAGTTTGACTCATTTAGGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCT
* *
1538978 TTCTTGTGAAACCAAAGTATCAATATCGTGTATCCTAA
260 TTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAA
1539016 AGATCACTAC
Statistics
Matches: 1469, Mismatches: 221, Indels: 59
0.84 0.13 0.03
Matches are distributed among these distances:
471 46 0.03
472 46 0.03
473 4 0.00
474 392 0.27
475 591 0.40
476 389 0.26
477 1 0.00
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.31
Consensus pattern (476 bp):
TTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCGATGCTTGTCTTATTTAAAGGATGAA
CTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCAT
TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTTCTAGA
ATCCAAGTTTGACTCATTTAGGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTT
TCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGTGCCTAAT
CCTGAAAAGAATGGGAATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAATCTTTGAAT
CTATCAAAAACGATGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTA
ATGAAGGGAATGTGTTTCTGG
Found at i:1537833 original size:159 final size:158
Alignment explanation
Indices: 1537078--1538789 Score: 467
Period size: 159 Copynumber: 10.8 Consensus size: 158
1537068 AAAAAAGTCG
* * * * * * *
1537078 TTCTTGCAAAACCAAAGCATCAATGTTATGTATCTTAATAGGAA--GACTATGTTTATGGTGCCT
1 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA-A-GAAGGGAATATGTTTCTGGTGCCC
* * * * * * * *
1537141 AATCCTGAAAAGAATGGGAATTAGTT-TGACTATTC-ATGTTTGTCTTATTTAAGAGA-CAATCT
64 AATCTTGAAAAGAATGGAAACT-GTTACGA-GAATCGATGCTTGTCTTATTTAAG-GATGAA-CT
*
1537203 TTGAATCTATCAAAAACGATCGAAAGAAATGCTT
125 TTGAATCTATCAAAAACGATGGAAAGAAATGCTT
* * * * * * *
1537237 TTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAAAGGAATGTGTTTCTGGT-TCCAA
1 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAAGAAGGGAATATGTTTCTGGTGCCCAA
*
1537301 TCTTGAAAAGAATGGAAACTGTTACGAGAATCGATGCTTGTCTTATTTAAAGGATAAACTTT-AA
66 TCTTGAAAAGAATGGAAACTGTTACGAGAATCGATGCTTGTCTTATTT-AAGGATGAACTTTGAA
* * ** * *
1537365 T-TTTAAGAAAAATATGGCAAAGAAAAGATT
130 TCTATCA-AAAACGATGG-AAAGAAATGCTT
* * * ** * * * * * * *
1537395 TCCATGCAAAAGGAAAACATCAATATCATTTATCTTAATG-AGGAGAATATGTTTGTAGTGCCTA
1 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAAGAAGG-GAATATGTTTCTGGTGCCCA
** * * ** * * * * *
1537459 ATC-ACAAAATGAATGCAAATCT-TTTCTTGAATCCAAGCTTGACTCATTTAGGGCA-GAAAC-T
65 ATCTTGAAAA-GAATGGAAA-CTGTTACGAGAATCGATGCTTGTCTTATTTAAGG-ATG-AACTT
* * * * * *
1537520 T-AAACTTTACAAAAATTGGTGGGAAGAAA-GCCT
126 TGAATCTAT-CAAAAA-CGATGGAAAGAAATGCTT
* * * * *
1537553 TTCTTGTGAAACCAAAGCATCAATATCTTGTATCCTAATGAGAA--GACTATGTTTATGGTGCCG
1 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA--AGAAGGGAATATGTTTCTGGTGCCC
** * * * * * * *
1537616 AATCTTGAAAAGAATGGGGATTAG-TAAGACTATTC-ATGTTTGTCTTATTTGAGAGATGATCTT
64 AATCTTGAAAAGAATGGAAACT-GTTACGA-GAATCGATGCTTGTCTTATTTAAG-GATGAACTT
*
1537679 TGAATCTATCAAAAACGATGGAGAGAAATGCTT
126 TGAATCTATCAAAAACGATGGAAAGAAATGCTT
* * * * *
1537712 TTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAACAAGGGAATGTGTTTCTGGTTCCCAA
1 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAAGAAGGGAATATGTTTCTGGTGCCCAA
* * * *
1537777 CCTTGAAAAGAATGGAGACTGTTACGAGAATCGATGCTTGTTTTATTTAAAGGATGAACTTTGAT
66 TCTTGAAAAGAATGGAAACTGTTACGAGAATCGATGCTTGTCTTATTT-AAGGATGAACTTTGAA
* *** * * * *
1537842 TTTAAGGAAAA-TATGGCTAAGAAAAGATT
130 TCTATCAAAAACGATGG-AAAGAAATGCTT
* * ** * * * * * * *
1537871 TCCATT-CAAAAGAAAATCATCAATATCATCTATCCCAATG--GGGAAAATGTGTTTATAGTGCC
1 TTC-TTGCGAAACCAAAGCATCAATATCATGTATCCTAAAGAAGGG--AATATGTTTCTGGTGCC
* ** * ** * * * * * * *
1537933 TAATC-ACAAAATAAAT-GAAGTTCATTACTAGAATCCACGTTTGTCTCATTTGAGGAATGAACT
63 CAATCTTGAAAA-GAATGGAAACT-GTTACGAGAATCGATGCTTGTCTTATTTAAGG-ATGAACT
* * **
1537996 TAG-A-CTGTCAAAAAATTAATGAGAAA-AAA-G-TGT
125 TTGAATCTATC-AAAAA-CGATG-GAAAGAAATGCT-T
* * * *
1538029 TTCTTGCGAAACCAAAGCATCAATATGATGTATCCTAATAAGAA--GACTATGATTACAT--TAC
1 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCT-A-AAGAAGGGAATATG-TTTC-TGGTGC
* ** * * ** * * ** * * *
1538090 CTAATCCAGAAAGGAACGGGGATTAG-TATGAGTGTTC-TTGCTTGTCGTATTTAAGAGAAGAAC
62 CCAATCTTGAAAAGAATGGAAACT-GTTACGAG-AATCGATGCTTGTCTTATTTAAG-GATGAAC
* * * * *
1538153 TTGGATTCTATCAAAAACGGTAGAAAGAAAAGCTT
124 TTTGAATCTATCAAAAACGATGGAAAGAAATGCTT
* * * * * * * *
1538188 TTTTTGTGACACCAAAGCATCAA-AGTCATGT-TTCTAATGAAGGGAATGTGTTT-TGGCTTCCT
1 TTCTTGCGAAACCAAAGCATCAATA-TCATGTATCCTAAAGAAGGGAATATGTTTCTGG-TGCCC
* * *
1538250 AATCTTGAAAGGAATGGAGATTGTTACGAGAAT-GATGCTTGTCTTATTTAAGGGATGAACTTTG
64 AATCTTGAAAAGAATGGAAACTGTTACGAGAATCGATGCTTGTCTTATTTAA-GGATGAACTTTG
* * *** * * * *
1538314 ATTTTAAGGAAAA-TAGGGCAAAGAAAAGATT
128 AATCTATCAAAAACGATGG-AAAGAAATGCTT
** * ** * * * * * *
1538345 TTCGCGCAAAAGAAAATCATCAATATCATTTATCCTAATG-AGGAGAATATGTTTATAGTGCCTA
1 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAAGAAGG-GAATATGTTTCTGGTGCCCA
** ** * * * * ** * *
1538409 ATC-ACAAAATGAAT-GAAGA-TCACTACTAGAATCCAAGCTTGACACATTTAAGGCATGCACTA
65 ATCTTGAAAA-GAATGGAA-ACT-GTTACGAGAATCGATGCTTGTCTTATTTAAGG-ATGAACTT
* * * * * *
1538471 AGACTTTA-CAAAAATTGGTAGG-AAGAAA-GCCT
126 TGAATCTATCAAAAA-CGAT-GGAAAGAAATGCTT
* * * * * *
1538503 TTCTTGCCAAACCAAAGCATTAATATCGTGTATCCTAATGAGAA--CACTATGTTTATGGCT-CC
1 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA--AGAAGGGAATATGTTTCTGG-TGCC
* * * * * * * ** *
1538565 AAATCCTGAAAAGAAT-GAAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAGACCATC
63 CAATCTTGAAAAGAATGGAA-ACT-GTTACGA-GAATCGATGCTTGTCTTATTTAAG-GATGAAC
* * *
1538627 TTTGAATCTATCCAAAATGATGGAAAGAAAAGCTT
124 TTTGAATCTATCAAAAACGATGGAAAGAAATGCTT
* * * * * * ** *
1538662 TTTTTGC-AACACCAAAGGATCAATGTTATGTATCC-AAATGAAGGGAATGTGCTTCTAATTCCC
1 TTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAAA-GAAGGGAATATGTTTCTGGTGCCC
* * * * * *
1538725 CACCTTGAAAAGAATAGAGACTGTTACGAGAATTGATGCTTGTCTTATTTAAGGATGAACCTTGA
64 AATCTTGAAAAGAATGGAAACTGTTACGAGAATCGATGCTTGTCTTATTTAAGGATGAACTTTGA
1538790 TATTAAGGAA
Statistics
Matches: 1103, Mismatches: 347, Indels: 207
0.67 0.21 0.12
Matches are distributed among these distances:
155 1 0.00
156 9 0.01
157 118 0.11
158 462 0.42
159 475 0.43
160 33 0.03
161 5 0.00
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (158 bp):
TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAAGAAGGGAATATGTTTCTGGTGCCCAA
TCTTGAAAAGAATGGAAACTGTTACGAGAATCGATGCTTGTCTTATTTAAGGATGAACTTTGAAT
CTATCAAAAACGATGGAAAGAAATGCTT
Found at i:1539108 original size:116 final size:116
Alignment explanation
Indices: 1538910--1539131 Score: 318
Period size: 116 Copynumber: 1.9 Consensus size: 116
1538900 AGATCATTTT
* * * * * * * **
1538910 TAGAATCCATGTTTGACTCATTTAAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAATT
1 TAGAATCCAAGCTTGACACATTTAAGGCACGAACTAAGACTTTACAAAAATAGCTAGGAAGAAAG
* *
1538975 CCTTTCTTGTGAAACCAAAGTATCAATATCGTGTATCCTAAAGATCACTAC
66 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAAAGATCACTAC
*
1539026 TAGAATCCAAGCTTGACACATTTGAGGCACGAACTAAGACTTTACAAAAATAGCTAGGAAGAAAG
1 TAGAATCCAAGCTTGACACATTTAAGGCACGAACTAAGACTTTACAAAAATAGCTAGGAAGAAAG
* *
1539091 CCTTTCTTGCGAGACCAAAGCATTAATATCGTGTATCCTAA
66 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAA
1539132 TGAGAAGACT
Statistics
Matches: 92, Mismatches: 14, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
116 92 1.00
ACGTcount: A:0.36, C:0.19, G:0.17, T:0.28
Consensus pattern (116 bp):
TAGAATCCAAGCTTGACACATTTAAGGCACGAACTAAGACTTTACAAAAATAGCTAGGAAGAAAG
CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAAAGATCACTAC
Found at i:1540419 original size:159 final size:158
Alignment explanation
Indices: 1540125--1540419 Score: 337
Period size: 159 Copynumber: 1.9 Consensus size: 158
1540115 CTACTCATGT
* * *
1540125 TTGTCTTATTTAAGAGACAAACTTTGAATCTATCAAAAATGATGGAAAGAAAAGCTTTTCTTGCA
1 TTGTCTTATTTAAGAGACAAACTTTGAATCTAACAAAAATGAGGGAAAGAAAAGATTTTCTTGCA
* * * * ** **
1540190 ATAGTAAAGCATTAATGTCATGTATCCTATTGAAGGGAATGTGTTTTAGGCTCCTAATCTTGAAA
66 AAAGAAAAGCATCAATATCATGTATCCTAACGAAGGGAATGTGTTTTAGGC-CCTAATCTACAAA
1540255 AGAATGGAGACGTTTACGAGATTCGATGC
130 AGAATGGAGACGTTTACGAGATTCGATGC
* * * ** *
1540284 TTGTCTTATTTAAGAGATAAACTTTGATTTTAAGGAAAAT-AGGGTAAAGAAACGATTTTCTTGC
1 TTGTCTTATTTAAGAGACAAACTTTGAATCTAACAAAAATGAGGG-AAAGAAAAGATTTTCTTGC
* *
1540348 AAAAGAAAATCATCAATATCATTTATCCTAACG-AGGAGAATGTGTTTATAGTG-CCTAATC-AC
65 AAAAGAAAAGCATCAATATCATGTATCCTAACGAAGG-GAATGTGTTT-TAG-GCCCTAATCTAC
1540410 AAAAGGAATG
127 AAAA-GAATG
1540420 ATGATCATTA
Statistics
Matches: 112, Mismatches: 19, Indels: 10
0.79 0.13 0.07
Matches are distributed among these distances:
158 10 0.09
159 98 0.88
160 3 0.03
161 1 0.01
ACGTcount: A:0.37, C:0.12, G:0.19, T:0.32
Consensus pattern (158 bp):
TTGTCTTATTTAAGAGACAAACTTTGAATCTAACAAAAATGAGGGAAAGAAAAGATTTTCTTGCA
AAAGAAAAGCATCAATATCATGTATCCTAACGAAGGGAATGTGTTTTAGGCCCTAATCTACAAAA
GAATGGAGACGTTTACGAGATTCGATGC
Found at i:1540512 original size:454 final size:448
Alignment explanation
Indices: 1539669--1540564 Score: 1222
Period size: 454 Copynumber: 2.0 Consensus size: 448
1539659 ATTTGACTAT
* * * *
1539669 TCATGTTTGTTTTATTTAAGACAAAAACTTTGATTCTTTCAAAAATGGTGGAAAGAAAAGCTTTT
1 TCATGTTTGTCTTATTTAAGACAAAAACTTTGAATCTATCAAAAATGATGGAAAGAAAAGCTTTT
* * * **
1539734 CTTGCGACCCCAATGCATCAATATCATGTATCCTAATGAAAGGAATATGTTTTGCCTTTTTAATC
66 CTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAAAGGAATATGTTTTGCCTTCCTAATC
*
1539799 TTGAAAAGAATAGAGACGGTTACAATTGATGCTTATCCTATTTAAGGATGAACTTAGATTTTAAG
131 TTGAAAAGAATAGAGACGGTTACAATTGATGCTTATCCTATTTAAGGATAAACTTAGATTTTAAG
** * *
1539864 GAAAATAAGGCAAAGAATTGATTTCCGTGCAAAAAAAAATCATCTATATCATTTATCCTAATGAG
196 GAAAATAAGGCAAAGAAACGATTTCCGTGCAAAAAAAAATCATCAATATCATTTATCCTAACGAG
* * *
1539929 GAGAATGTGTTTATAGTGCCTAATCACAAATGAATGAAGATCATTTCTAGAATCCATGTTTTACT
261 GAGAATGTGTTTATAGTGCCTAATCACAAAGGAATGAAGATCATTACTAGAATCCATGTTTAACT
*
1539994 CATTTGAGGCACGAACTTAGACTTTACAAAAATTGGGGGGAAAAAAGCCTTTCTTGCAAAACCAA
326 AATTTGAGGCACGAACTTAGACTTTACAAAAATTGGGGGGAAAAAAGCCTTTCTTGCAAAACCAA
* *
1540059 AGCATCAATATCCTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTAGCTAC
391 AGCATCAATATCCTGTA-CCTAATGAGAAGACTATG-TTATGGTACCTAATCCTAGCTAC
* *
1540119 TCATGTTTGTCTTATTTAAGAGACAAACTTTGAATCTATCAAAAATGATGGAAAGAAAAGCTTTT
1 TCATGTTTGTCTTATTTAAGACAAAAACTTTGAATCTATCAAAAATGATGGAAAGAAAAGCTTTT
* ** * * * * * *
1540184 CTTGCAATAGTAAAGCATTAATGTCATGTATCCTATTGAAGGGAATGTGTTTTAGGC-TCCTAAT
66 CTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAAAGGAATATGTTTT-GCCTTCCTAAT
* * * * *
1540248 CTTGAAAAGAATGGAGACGTTTACGAGATTCGATGCTTGTCTTATTTAAGAGATAAACTTTGATT
130 CTTGAAAAGAATAGAGACGGTTAC-A-ATT-GATGCTTATCCTATTTAAG-GATAAACTTAGATT
* * * * *
1540313 TTAAGGAAAATAGGGTAAAGAAACGATTTTCTTGCAAAAGAAAATCATCAATATCATTTATCCTA
191 TTAAGGAAAATAAGGCAAAGAAACGATTTCCGTGCAAAAAAAAATCATCAATATCATTTATCCTA
* *
1540378 ACGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAGGAATGATGATCATTACTCGAATCCATG-
256 ACGAGGAGAATGTGTTTATAGTGCCTAATCAC-AAAGGAATGAAGATCATTACTAGAATCCATGT
* * * * *
1540442 TTAACTAATTTGATGCATGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAA-TCTTTCTTGCG
320 TTAACTAATTTGAGGCACGAACTTAGACTTTACAAAAATTGGGGGGAA-AAAAGCCTTTCTTGCA
* * **
1540506 AAACCAAAGCATCATTGTTGTGTACCTAATGAGAAGACTATGTTATGGTACCTAATCCT
384 AAACCAAAGCATCAATATCCTGTACCTAATGAGAAGACTATGTTATGGTACCTAATCCT
1540565 GAAAAGAATT
Statistics
Matches: 387, Mismatches: 52, Indels: 12
0.86 0.12 0.03
Matches are distributed among these distances:
450 128 0.33
451 3 0.01
452 19 0.05
453 34 0.09
454 172 0.44
455 31 0.08
ACGTcount: A:0.35, C:0.14, G:0.18, T:0.33
Consensus pattern (448 bp):
TCATGTTTGTCTTATTTAAGACAAAAACTTTGAATCTATCAAAAATGATGGAAAGAAAAGCTTTT
CTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAAAGGAATATGTTTTGCCTTCCTAATC
TTGAAAAGAATAGAGACGGTTACAATTGATGCTTATCCTATTTAAGGATAAACTTAGATTTTAAG
GAAAATAAGGCAAAGAAACGATTTCCGTGCAAAAAAAAATCATCAATATCATTTATCCTAACGAG
GAGAATGTGTTTATAGTGCCTAATCACAAAGGAATGAAGATCATTACTAGAATCCATGTTTAACT
AATTTGAGGCACGAACTTAGACTTTACAAAAATTGGGGGGAAAAAAGCCTTTCTTGCAAAACCAA
AGCATCAATATCCTGTACCTAATGAGAAGACTATGTTATGGTACCTAATCCTAGCTAC
Found at i:1541012 original size:392 final size:392
Alignment explanation
Indices: 1540270--1541029 Score: 1053
Period size: 392 Copynumber: 1.9 Consensus size: 392
1540260 GGAGACGTTT
* * * *
1540270 ACGAGATTCGATGCTTGTCTTATTTAAGAGATAAACTTTGATTTTAAGGAAAATAGGGTAAAGAA
1 ACGAGAATCGATGCTTGTCTTATTTAAGAGATAAACTTTGATTTAAAGAAAAATAGGGCAAAGAA
* *
1540335 ACGATTTTCTTGCAAAAGAAAATCATCAATATCATTTATCCTAACGAGGAGAATGTGTTTATAGT
66 AAGATTTTCTTGCAAAAAAAAATCATCAATATCATTTATCCTAACGAGGAGAATGTGTTTATAGT
* * * *
1540400 GCCTAATCACAAAAGGAATGATGATCATTACTCGAATCCATGTTAACTAATTTGATGCATGAACT
131 GCCTAATCACAAAAGGAATGAAGATCATTACTAGAATCCATGTTAACTAATTTGAGGCACGAACT
* * * * * * * * *
1540465 TAGACTTTACAAAAATTGGTGGGAAGAAAATCTTTCTTGCGAAACCAAAGCATCATTGTTGTGTA
196 AAGACTTCACAAAAATTAGTGAGAAGAAAACCTTTCTTGCAAAACCAAAGCATCAATATCGTGTA
* * *
1540530 CCTAATGAGAAGACTATGTTATGGTACCTAATCCTGAAAAGAATTCAGATTAGTATGACTATTTA
261 CCGAATGAGAAGACTATGTTATGGTACCTAATCCTGAAAAGAATGCAGATTAGTATGACTATTCA
*
1540595 TGTTTGTCCTATTTAAGACACAAACTTTGATTCTATCAAAAACAAAGGAAAAACAATAGAGATTG
326 TGTTTGTCCTATATAAGACACAAACTTTGATTCTATCAAAAACAAAGGAAAAACAATAGAGATTG
1540660 TC
391 TC
* *
1540662 ACGAGAATCGATGCTTGTCTTTTTTAAG-G-TATGACTTTGATTTAAAGAAAAATAGGGCAAA-A
1 ACGAGAATCGATGCTTGTCTTATTTAAGAGATA-AACTTTGATTTAAAGAAAAATAGGGCAAAGA
* **
1540724 AAAGATTTTCTTG-AAAAAAAAATCATCAATATCATTTATCTTAGTGAGGAGAATGTGTTTATAG
65 AAAGATTTTCTTGCAAAAAAAAATCATCAATATCATTTATCCTAACGAGGAGAATGTGTTTATAG
* * ** *
1540788 TGCCTAATCACAAAATGAATGAAGATTATTACTAGAATCCTTAT-TTGTCTCATTTGAGGCACGA
130 TGCCTAATCACAAAAGGAATGAAGATCATTACTAGAATCC--ATGTTAACTAATTTGAGGCACGA
* * *
1540852 ACTAAGACTTCACAAAAATTAGTGAGAAGAAAGCCTTTCTTTCAAAACCAAAGCTTCAATATCGT
193 ACTAAGACTTCACAAAAATTAGTGAGAAGAAAACCTTTCTTGCAAAACCAAAGCATCAATATCGT
* * * **
1540917 GTATCCGAATGAGATGACTATGTTCATGGTTCCTAGTCCTGAAAAGAATGGGGATTAGTATGACT
258 GTA-CCGAATGAGAAGACTATGTT-ATGGTACCTAATCCTGAAAAGAATGCAGATTAGTATGACT
* *
1540982 ATTCATGTTTGTCTTATATAAGAGACAAACTTTGATTCTATCAAAAAC
321 ATTCATGTTTGTCCTATATAAGACACAAACTTTGATTCTATCAAAAAC
1541030 GATGGTAAGA
Statistics
Matches: 320, Mismatches: 43, Indels: 10
0.86 0.12 0.03
Matches are distributed among these distances:
389 83 0.26
390 86 0.27
391 46 0.14
392 105 0.33
ACGTcount: A:0.37, C:0.14, G:0.17, T:0.32
Consensus pattern (392 bp):
ACGAGAATCGATGCTTGTCTTATTTAAGAGATAAACTTTGATTTAAAGAAAAATAGGGCAAAGAA
AAGATTTTCTTGCAAAAAAAAATCATCAATATCATTTATCCTAACGAGGAGAATGTGTTTATAGT
GCCTAATCACAAAAGGAATGAAGATCATTACTAGAATCCATGTTAACTAATTTGAGGCACGAACT
AAGACTTCACAAAAATTAGTGAGAAGAAAACCTTTCTTGCAAAACCAAAGCATCAATATCGTGTA
CCGAATGAGAAGACTATGTTATGGTACCTAATCCTGAAAAGAATGCAGATTAGTATGACTATTCA
TGTTTGTCCTATATAAGACACAAACTTTGATTCTATCAAAAACAAAGGAAAAACAATAGAGATTG
TC
Found at i:1544909 original size:19 final size:21
Alignment explanation
Indices: 1544872--1544915 Score: 65
Period size: 19 Copynumber: 2.1 Consensus size: 21
1544862 GTTAAGTATA
1544872 AATGTTTTTCAAGCATAAAAAT
1 AATGTTTTTCAAG-ATAAAAAT
1544894 AATG-TTTTCAAG-TAAAAAT
1 AATGTTTTTCAAGATAAAAAT
1544913 AAT
1 AAT
1544916 CCAAAGTATC
Statistics
Matches: 22, Mismatches: 0, Indels: 3
0.88 0.00 0.12
Matches are distributed among these distances:
19 10 0.45
21 8 0.36
22 4 0.18
ACGTcount: A:0.48, C:0.07, G:0.09, T:0.36
Consensus pattern (21 bp):
AATGTTTTTCAAGATAAAAAT
Found at i:1545166 original size:33 final size:33
Alignment explanation
Indices: 1545123--1545199 Score: 109
Period size: 33 Copynumber: 2.3 Consensus size: 33
1545113 AACTTACTTA
*
1545123 GTATCGATACAGTGTATCGATACATGGTCAAAT
1 GTATCGATACAGTATATCGATACATGGTCAAAT
* * **
1545156 GTATCAATACATTATATCGATAGGTGGTCAAAT
1 GTATCGATACAGTATATCGATACATGGTCAAAT
1545189 GTATCGATACA
1 GTATCGATACA
1545200 ATGAGCCCAA
Statistics
Matches: 38, Mismatches: 6, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
33 38 1.00
ACGTcount: A:0.35, C:0.14, G:0.19, T:0.31
Consensus pattern (33 bp):
GTATCGATACAGTATATCGATACATGGTCAAAT
Found at i:1548729 original size:19 final size:20
Alignment explanation
Indices: 1548695--1548733 Score: 62
Period size: 19 Copynumber: 1.9 Consensus size: 20
1548685 GTATAATTGT
1548695 TTTTCAAGCATAAAAATAATG
1 TTTTCAAG-ATAAAAATAATG
1548716 TTTTCAAG-TAAAAATAAT
1 TTTTCAAGATAAAAATAAT
1548734 CCAAATATCG
Statistics
Matches: 18, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
19 10 0.56
21 8 0.44
ACGTcount: A:0.49, C:0.08, G:0.08, T:0.36
Consensus pattern (20 bp):
TTTTCAAGATAAAAATAATG
Found at i:1548972 original size:13 final size:13
Alignment explanation
Indices: 1548941--1549010 Score: 50
Period size: 13 Copynumber: 4.8 Consensus size: 13
1548931 ACTTACTCAG
* *
1548941 TATCGATACAGTG
1 TATCGATACATTA
*
1548954 TTTCGATACATTA
1 TATCGATACATTA
1548967 TATCGATACATGGTCAAA
1 TATCGATACAT--T---A
1548985 TGTATCGATACATTA
1 --TATCGATACATTA
1549000 TATCGATACAT
1 TATCGATACAT
1549011 GGTCAAATCT
Statistics
Matches: 46, Mismatches: 4, Indels: 14
0.72 0.06 0.22
Matches are distributed among these distances:
13 31 0.67
15 2 0.04
18 2 0.04
20 11 0.24
ACGTcount: A:0.34, C:0.16, G:0.14, T:0.36
Consensus pattern (13 bp):
TATCGATACATTA
Found at i:1548992 original size:20 final size:19
Alignment explanation
Indices: 1548967--1549030 Score: 68
Period size: 20 Copynumber: 3.6 Consensus size: 19
1548957 CGATACATTA
1548967 TATCGATACATGGTCAAAT
1 TATCGATACATGGTCAAAT
1548986 GTATCGATACAT--T---A-
1 -TATCGATACATGGTCAAAT
1549000 TATCGATACATGGTCAAAT
1 TATCGATACATGGTCAAAT
1549019 CTATCGATACAT
1 -TATCGATACAT
1549031 TGAGCCCAAC
Statistics
Matches: 37, Mismatches: 0, Indels: 14
0.73 0.00 0.27
Matches are distributed among these distances:
13 11 0.30
15 2 0.05
18 2 0.05
20 22 0.59
ACGTcount: A:0.36, C:0.17, G:0.14, T:0.33
Consensus pattern (19 bp):
TATCGATACATGGTCAAAT
Found at i:1548998 original size:33 final size:33
Alignment explanation
Indices: 1548956--1549031 Score: 143
Period size: 33 Copynumber: 2.3 Consensus size: 33
1548946 ATACAGTGTT
*
1548956 TCGATACATTATATCGATACATGGTCAAATGTA
1 TCGATACATTATATCGATACATGGTCAAATCTA
1548989 TCGATACATTATATCGATACATGGTCAAATCTA
1 TCGATACATTATATCGATACATGGTCAAATCTA
1549022 TCGATACATT
1 TCGATACATT
1549032 GAGCCCAACG
Statistics
Matches: 42, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
33 42 1.00
ACGTcount: A:0.36, C:0.17, G:0.13, T:0.34
Consensus pattern (33 bp):
TCGATACATTATATCGATACATGGTCAAATCTA
Found at i:1549068 original size:43 final size:43
Alignment explanation
Indices: 1549020--1549117 Score: 160
Period size: 43 Copynumber: 2.3 Consensus size: 43
1549010 TGGTCAAATC
*
1549020 TATCGATACATTGAGCCCAACGATTATAAATTTCAAATACTTG
1 TATCGATACATTGAGCCCAACGACTATAAATTTCAAATACTTG
* * *
1549063 TATCGACACATTGATCCCAACGGCTATAAATTTCAAATACTTG
1 TATCGATACATTGAGCCCAACGACTATAAATTTCAAATACTTG
1549106 TATCGATACATT
1 TATCGATACATT
1549118 ATGAAAAGTA
Statistics
Matches: 50, Mismatches: 5, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
43 50 1.00
ACGTcount: A:0.36, C:0.20, G:0.11, T:0.33
Consensus pattern (43 bp):
TATCGATACATTGAGCCCAACGACTATAAATTTCAAATACTTG
Found at i:1550579 original size:476 final size:473
Alignment explanation
Indices: 1549791--1550683 Score: 1190
Period size: 476 Copynumber: 1.9 Consensus size: 473
1549781 AGGTAATGTG
* * *
1549791 TTTCGGTTTCCCAATCTTGAAAAGAATGTAGACTGTTACAAGAATCGATGCTTGTCTTATTTAAT
1 TTTCGGTTTCCCAATCTTGAAAAGAATGTAGACTCTTACAAGAATCAATGCTTGTCTTATTTAAA
* * * *
1549856 GGATGAACATTCATTTTAAGTAAAATAAAAGAAAAGATTTTCAGGTAGAAGAAAGTCATCAAAAT
66 GGATGAACATTCATTTTAAGGAAAATAAAAGAAAAGATTTTCAGGCAAAAGAAAATCATCAAAAT
* * *
1549921 CACTTATCCAAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATTAACATCGTTAGT
131 CACTTATCCAAATAAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATAAACATCATTAGT
* * * *
1549986 AGAATCTATGTTTGTCTCGTTTAAGGCACGAACTTAGACTTTACAAAAATTGGTGAGAAAAGAGC
196 AGAACCCAAGTTTGTCTCATTTAAGGCACGAACTTAGACTTTACAAAAATTGGTGAGAAAAGAGC
* * *
1550051 CTTTCTTGCAAAACCAAATCATCAATATGATGTATCCTACTGAGAAGACTATGTTTATGGTGCCT
261 CTTTCTTGCAAAACCAAAGCATCAATATGATGTATCCTAATGAGAAGACTATGTTCATGGTGCCT
* * * * * * **
1550116 AATCCTGAAAGGAATAGGGATTAGTATGAGTATTAATGTTTATCTTATTTAA-ATGATAAGTTTT
326 AATCCTAAAAAGAATAGGGATTAATATGACTATTAATGTTTATCTTATATAAGA-GACAAACTTT
1550180 GATT-TCACCAAAAACAGTGGAAAGAAAAGCTTTTCTTGTGATAGAAAAGCATTAATGTCATTTA
390 GATTCT-ACCAAAAACAGTGGAAAGAAAAGCTTTTCTTGTGATAGAAAAGCATTAATGTCATTTA
1550244 TTCTAATGAAAGGAATGCAT
454 TTCTAATGAAAGGAATGCAT
* *
1550264 TTTCGG-TTCCCAATCTTGAAAAGAATAG-AGACTCTTACGAGAATCAATGCTTTTCTTATTTAA
1 TTTCGGTTTCCCAATCTTGAAAAGAAT-GTAGACTCTTACAAGAATCAATGCTTGTCTTATTTAA
* *
1550327 AGGATGAACATTCATTTTAAGGAAAATAGGGTGAAGAAAAGATTTAT-ATGCAAAAGAAAATCAT
65 AGGATGAACATTCATTTTAAGGAAAATA----AAAGAAAAGATTT-TCAGGCAAAAGAAAATCAT
* * * * *
1550391 TAATATCACTTATCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCACGAAATGAATAAAGATC
125 CAAAATCACTTATCCAAATAAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATAAACATC
* * * * *
1550456 ATTAGTAGAACCCAAGCTTT-TCTCATTTGAGGCATGAACTTATAGTTTACAAAAATTGGTGGGA
190 ATTAGTAGAACCCAAG-TTTGTCTCATTTAAGGCACGAACTTAGACTTTACAAAAATTGGTGAGA
* * * *
1550520 AGAA-AGCTTTTCTTGCGAAACCAAAGCTTCAATATCG-TGTATCCTAATGAGATGACTATGTTC
254 A-AAGAGCCTTTCTTGCAAAACCAAAGCATCAATAT-GATGTATCCTAATGAGAAGACTATGTTC
* * * *
1550583 ATGGTGCCTAGTCCTAAAAAGAATGGGGATTAATATGACTATTCATGTTTGTCTTATATAAGAGA
317 ATGGTGCCTAATCCTAAAAAGAATAGGGATTAATATGACTATTAATGTTTATCTTATATAAGAGA
* *
1550648 CAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAA
382 CAAACTTTGATTCTACCAAAAACAGTGGAAAGAAAA
1550684 TAGTGGGGAT
Statistics
Matches: 360, Mismatches: 49, Indels: 19
0.84 0.11 0.04
Matches are distributed among these distances:
472 77 0.21
473 7 0.02
476 267 0.74
477 9 0.03
ACGTcount: A:0.37, C:0.13, G:0.18, T:0.32
Consensus pattern (473 bp):
TTTCGGTTTCCCAATCTTGAAAAGAATGTAGACTCTTACAAGAATCAATGCTTGTCTTATTTAAA
GGATGAACATTCATTTTAAGGAAAATAAAAGAAAAGATTTTCAGGCAAAAGAAAATCATCAAAAT
CACTTATCCAAATAAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATAAACATCATTAGT
AGAACCCAAGTTTGTCTCATTTAAGGCACGAACTTAGACTTTACAAAAATTGGTGAGAAAAGAGC
CTTTCTTGCAAAACCAAAGCATCAATATGATGTATCCTAATGAGAAGACTATGTTCATGGTGCCT
AATCCTAAAAAGAATAGGGATTAATATGACTATTAATGTTTATCTTATATAAGAGACAAACTTTG
ATTCTACCAAAAACAGTGGAAAGAAAAGCTTTTCTTGTGATAGAAAAGCATTAATGTCATTTATT
CTAATGAAAGGAATGCAT
Found at i:1550746 original size:81 final size:81
Alignment explanation
Indices: 1550606--1550764 Score: 246
Period size: 81 Copynumber: 2.0 Consensus size: 81
1550596 CTAAAAAGAA
* * *
1550606 TGGGGATTAATATGACTATTCATGTTTGTCTTATATAAGAGACAAACTTTGATTCTATCAAAAAC
1 TGGGGATTAATATAACTATTAATGTTTGTCTTATATAAAAGACAAACTTTGATTCTATCAAAAAC
*
1550671 GGTGGAAAGAAAATAG
66 GGTGAAAAGAAAATAG
* * * *
1550687 TGGGGATTAGTATAAGTATTAATGTTTGTCTTATTTAAAAGACAAACTTTGATTTTATCAAAAAC
1 TGGGGATTAATATAACTATTAATGTTTGTCTTATATAAAAGACAAACTTTGATTCTATCAAAAAC
1550752 GGTGAAAAGAAAA
66 GGTGAAAAGAAAA
1550765 GCTTTTCATG
Statistics
Matches: 70, Mismatches: 8, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
81 70 1.00
ACGTcount: A:0.40, C:0.08, G:0.19, T:0.33
Consensus pattern (81 bp):
TGGGGATTAATATAACTATTAATGTTTGTCTTATATAAAAGACAAACTTTGATTCTATCAAAAAC
GGTGAAAAGAAAATAG
Found at i:1551616 original size:476 final size:476
Alignment explanation
Indices: 1550687--1556010 Score: 5891
Period size: 476 Copynumber: 11.2 Consensus size: 476
1550677 AAGAAAATAG
* * * * *
1550687 TGGGGATTAGTATAAGTATTAATGTTTGTCTTATTTAAAAGACAAACTTTGATTTTATCAAAAAC
1 TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
* * * * * *
1550752 GGTGAAAAGAAAAGCTTTTCATGTGATAGCTAAGCATTAATGTCATGTATCCTAATGAAGGGAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
** * * * * * *
1550817 GCATTTTTGGTTCCCAATGTTGAAAAGAATGGAGACTGTTACGATAATCAATG-TTAGTCTTATT
131 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCGATGCAT-GTCTTATT
* * * * ** ** *
1550881 TAAGGTAAGAACTTTGATTT-AATGAAAATAGGGCAAAGAAAAGATTACTTTGTGAAAGAAAATC
195 TAAGGAAAGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATGCAAAATAAAATC
*
1550945 ATC-A-ATCATTTATCCAAAT-ATGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
260 ATCTATATCATTTATCCTAATGA-GGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
* * * * * *
1551007 ATCATTAGTAGAATCCATGTTTATCTGATTTGAGGCACAAACTTAGACTTTACAAAAATTGGCTA
324 ATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATTTG-TA
* * * * * * * * *
1551072 -GAAAAAAGCCTTTTTTGTGAAACTAAAGCAACAGTATCATGTATACTTATGAGAAGACTGTGTT
388 GGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTT
1551136 TATGGTGCCTAATCTTGAAAAGAA
453 TATGGTGCCTAATCTTGAAAAGAA
* * * * * * *
1551160 TGGGGTTTTGTACGACTATTAAAGTTTCTCTTTTTTAAATGACAAACTTTAATTCTATAAAAAAC
1 TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
* * * * *
1551225 GGTGGAAAGAAAAGCTTGTCTTGTGACAACAAAACATCAATGTCATGTATCCTAATGAAGAGAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* * * * * ** * *
1551290 CTATTTTTGGTTCCCTATCTTGAAAAGAATAGAGAGTATTGTAAGAATCGATGCACGTCATATTT
131 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCGATGCATGTCTTATTT
* * *
1551355 AAGGAAAGAATTTTGATTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATTCAAAATAAAATCT
196 AAGGAAAGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATGCAAAATAAAATCA
* *
1551420 TCTGTATCATTTATCCTAATGAAGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
261 TCTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* * * * * *
1551485 CATTACTAGAATCCAAGTATGTCTTCTTTGAGGAACGAGCTTAGACTTTACAAAAGTTTGTTGGA
326 CATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATTTGTAGGA
*
1551550 AGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTACCCTAATGAGAAGACTATGTTTAT
391 AGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTTTAT
*
1551615 GGTGCTTAATCTTGAAAAGAA
456 GGTGCCTAATCTTGAAAAGAA
* * * *
1551636 TAGGGATTAT-TATGACTATTCATGTTTATCTT-TTT---TAACAAACTTTGATTCTATCAAAAA
1 TGGGGATT-TGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAA
* * * * * * *
1551696 TGATGAAAAGAAAATCTTTTCTTGCAACAGCAATGCATAAATGTCATGTATCCTAATGAAGGGAA
65 CGGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAA
* * ** * *
1551761 TGTGTTTTTGGTTCCTAATCTTGAAAGGAATGCTGAGTGTTGCAAGAATCGATGCTTGTCTTATT
130 TGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCGATGCATGTCTTATT
*
1551826 TAAGGAAAGAACTTTCATTT-------AA-AGGGCAAAGAAATGGTTACCATGCAAAATAAAATC
195 TAAGGAAAGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATGCAAAATAAAATC
*
1551883 ATCTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCATAAAATGAATGAAGA
260 ATCTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
* * * * **
1551948 TCATTACTAGAATCTATGTTGGT-TTGATTTGAGGCACAAACTTAGACTTTACAAAAA-TTGGCG
325 TCATTACTAGAATCCATGTTTGTCTT-ATTTGAGGAACGAACTTAGACTTTACAAAAATTTGTAG
* * * * *
1552011 AGAAGAAAGCTTTTCTTGCAAAACCAAAGCATTAATATCATGTATCCTTATGAGAAAACTATGTT
389 -GAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTT
* *
1552076 TATGGTGCCTAATCCTAAAAAGAA
453 TATGGTGCCTAATCTTGAAAAGAA
* * * *
1552100 TGGGGATTTGTATGACTATTAATATTTGTCTTATTTAAGTGACAAACTTTGATTCGATCAAAAAT
1 TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
* * * * * *
1552165 GGTGGAAAGAAAAGCTTTTCATGCAACACCAAAGCATCAACGCCATGTATCTTAATGAAGGGAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* * * * ** * * *
1552230 GTGTTTTTTGTTCCCAATCTTGAAAAGAATTGAAACTGTTATGAGAATTGAAG-ATTGTTTTATT
131 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCGATGCA-TGTCTTATT
** * ** * * * *** ** * * *
1552294 TCCGGGATTAACTTTGGTTTTAAGGAAAATATGGCAAAGAAAAAATTTTCAAGTAGCAA-AAAAT
195 TAAGGAAAGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATGCA-AAATAAAAT
* * * * * ** *
1552358 CATCAATAGCATTTATCCTAATGAAGAGAATGTGTCTATAGTGCCTAATTACAAAATGAAAAAAA
259 CATCTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
* * * * *
1552423 AACATTGCTAGAATCCATG--TGTCTTATTTGAAGAACGAACTTAGACATTACAAAAATTTATAG
324 ATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATTTGTAG
** * * *
1552486 GAAGAAAGCCTTTCTTGCG-AACACAAAATATCAACATCATGCATCCTAAAGAGAAGACTATGTT
389 GAAGAAAGCCTTTCTTGCGAAAC-CAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTT
1552550 TATGGTGCCTAATCTTGAAAAGAA
453 TATGGTGCCTAATCTTGAAAAGAA
* * * *
1552574 TGAGGATTTGTATGACTATTCATTTTTGTCTTATTTAAATGAAAAACTTTGATTCTATCAAAAAC
1 TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
* * * * * *
1552639 GGTGGAAATAAAATCTTTTCTTGTGACAACATAGCATCAATGTCATGTATCCTAATGAAGGTAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* * *
1552704 GTGTTTTTGG-TCCTAATCATGAAAAGAATGGAGAGTGTTACAAGAATCGATGCTTGTCTTATTT
131 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCGATGCATGTCTTATTT
*
1552768 AAGGAAAGAACTTTGATTTAAAGGAAAATAAGGCAAAGAAATGGTTACCATGCAAAATAAAATCA
196 AAGGAAAGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATGCAAAATAAAATCA
* * * * *
1552833 TCTATATCATTTATCGTAATGAGGAGGATGTGTTTATAGTGCATAATCACAACATGAAAGAAGAT
261 TCTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* * * * * * *
1552898 CATTGCTAGGATCTATGTTTGTCTGATTTGA-GACACGAACTTATACTTTACAAAAATTGGCCA-
326 CATTACTAGAATCCATGTTTGTCTTATTTGAGGA-ACGAACTTAGACTTTACAAAAATTTG-TAG
* *
1552961 GAAGAAAGCCTTTCTTGCG-AATCAAAGCATCAATATCGA-GTATCCTTATGAGAAGACTATGTT
389 GAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATC-ATGTATCCTAATGAGAAGACTATGTT
* *
1553024 TATGGTGCCTAATCCTAAAAAGAA
453 TATGGTGCCTAATCTTGAAAAGAA
** * *
1553048 AAGGGATTTGTTTGACTATTAATGTTTGTCTTATTTAAGA-GACAAACTTTGATTCGATCAAAAA
1 TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAA-ATGACAAACTTTGATTCTATCAAAAA
* * * * * * *
1553112 TGGTAGAAAGAAAAGCTTTTCTTGCAACACCAAAGCGTCAATGTAATGTATCCAAATGAAGGGAA
65 CGGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAA
** * * * ** ** * *
1553177 TGCATTTTTTGTTCCCAATCTTGAAAAGAATTGAGATTGTTATGAGAATTAAAG-ATTGTCTTTT
130 TGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCGATGCA-TGTCTTAT
* * * ** ** * ** *
1553241 TTCAAGG-ATGAAC-TTGATTTTAAGGAAAATATGGCAAAGAAA-AATTTTCATGTAGCAGAAAA
194 TT-AAGGAAAGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATGCAAAATAAAA
* * *
1553303 TCAT-TAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCGAATCA-TAAATGAATAA
258 TCATCT-ATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
* * * * * *
1553366 AGATCATTACT-GTAGTCCATGCTTGTATTATTTGAGGAACCAACTTAGATTTTACAAAAATTTA
322 AGATCATTACTAG-AATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATTTG
* * * *
1553430 TGGGAAGAAGGCCTTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTAATGAGAGGACTATG
386 TAGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATG
1553495 TTTATGGTGCCTAATCTTGAAAAGAA
451 TTTATGGTGCCTAATCTTGAAAAGAA
** * * * *
1553521 TGGGGATTAATATGACTATTCATGTTTGTCTTATTTAAATGACAAACTTTAATTCTATAAAAAAT
1 TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
* * * * * *
1553586 GGTGGAAAGAAAAGCATTTCTTTCGACAGTAAAGCATCAATGTGATTTATCCTAATGAAGGAAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* * * *
1553651 GTGTTTTTGGTTCTCAATCTTGAAAATAATGGAGAGTGTTACAAGAATCTATGCTTGTCTTATTT
131 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCGATGCATGTCTTATTT
* *
1553716 AAGGAAAGAACTTTGATTCAAAAGAAAATAGGGCAAAGAAATGGTTTA-CATGCAAAATAAAATC
196 AAGGAAAGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAATGG-TTACCATGCAAAATAAAATC
** * * * *
1553780 ATCCGTATCATTTATCCTAATAAAGAGAATGTGCTTATTA-TGCCTAATCATAAAATGAATGAAG
260 ATCTATATCATTTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAATGAATGAAG
* * *
1553844 ATCATTACTAGAATCCATGTTTGTCTGATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTAG
324 ATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATTTGTAG
* * * *
1553909 GAAGAAAGCCTTTTTTGCAAAACAAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTTT
389 GAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTTT
* * *
1553974 ATGGTGCCAAATCCTGAAAATAA
454 ATGGTGCCTAATCTTGAAAAGAA
* * * * *
1553997 TAGGGATTTGTATGACTATTAATGTTTTTCATATTTAAGA-GACAAACTTTGATTCAATCAACAA
1 TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAA-ATGACAAACTTTGATTCTATCAAAAA
* ** * *
1554061 TGGTGGAAAGAAAAGCTTTTCTTGAAACA-CTAAAGCATCAATGTAATGTATCCAAATGAAGGGA
65 CGGTGGAAAGAAAAGCTTTTCTTGCGACAGC-AAAGCATCAATGTCATGTATCCTAATGAAGGGA
** ** * * * ** * *
1554125 ATGCATTTTTCTTTCCTAATCTTGAAAAGAATTGAGATTGTTATGAGAATTGAAG-ATTGTCTTA
129 ATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCGATGCA-TGTCTTA
* * * ** ** ** *
1554189 TTTCAAGG-AGGAAATTTGATTTTAAA-GAAAATATGGCAAAGAAA-AATTTTCATGCAGCAGAA
193 TTT-AAGGAAAGAACTTTGA-TTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATGCAAAATAA
* * *
1554251 AATCAT-TAATATCATTTATCCTACTGAGCAGAATGTGTTTATAGTGCCGAATCAC-AAATGAAT
256 AATCATCT-ATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * * * * * * *
1554314 AAAGATCATTACTATAGTCCATGTTTGTATTTTTTGAGAAACTAACTTAGATTTTACAAAAATTT
320 GAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATTT
* * * * *
1554379 -AATGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATTAACATCATGTGTCCTAAAGAGAAGACTA
385 GTA-GGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTA
* *
1554443 TGTTTATGGTGCCTAATTTTGAAAGGAA
449 TGTTTATGGTGCCTAATCTTGAAAAGAA
* * * *
1554471 TGAGTATTAGTATGACTATTAATGTTTGCCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
1 TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
** * * * *
1554536 GGTGGAAAGAAAATATTTTCTTGCGATAGTAAAGCATCAATGTCTTGTATACTAATGAAGGGAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
** * *
1554601 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAGCCAATGCTTGTCTTATTT
131 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCGATGCATGTCTTATTT
* * * *
1554666 AAGGAAAAAACTTTGGA-TTAAAGGAAAATAAGGCAAAAAAATAGTTACCATGCAAAATAAAATC
196 AAGGAAAGAACTTT-GATTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATGCAAAATAAAATC
* * *
1554730 ATGTGA-ATCGTTTATCCTAATGAGGAGAACGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
260 ATCT-ATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
* * * * * * *
1554794 ATCATTTCTAGAATCCATGTTTGTCTTATTCGAGGAATGAACTTAAACTTTACAAAAATGTATGG
324 ATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATTTGTAG
* * * *
1554859 GAAGAAAGCCTTTCTTGCAAAACCAAACCATCAATATCGTGTATCCTAATGAGAAGCCTATGTTT
389 GAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTTT
1554924 ATGGTGCCTAATCTTGAAAAGAA
454 ATGGTGCCTAATCTTGAAAAGAA
* * * * * * *
1554947 TGGGGATTAGTATAACTATTCATGTTTATCTTACTTAAACGACAAACTTTCATTCTATCAAAAAC
1 TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
* * * *
1555012 AGTGGAAAGAAAAGCTTTTCTTGCAACAGCAAAGCATCAATGTCATGTATCTTGATGAAGGGAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* * *
1555077 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTGCAAGAATCGATGCTTGTCATATTT
131 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCGATGCATGTCTTATTT
* *
1555142 AAGGGAAGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATGCAAAATAAAATCG
196 AAGGAAAGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATGCAAAATAAAATCA
* * *
1555207 TCTGTATCATTTATCCTAATGAGGAGAATGTATTTATCGTGCCTAATCACAAAATGAATGAAGAT
261 TCTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* * * * * ** *
1555272 CATTACTAGAATCCATGTTTCTCTGATTTG-GGGATGAACTTAGACTTTACAAAACTCAGTAGAA
326 CATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATTTGTAGGA
* * *
1555336 AGAAAGCCGTTCTTGCGAAACCAAAGCATCAATA--GTGTATGTCCTTATGAGAAGACTATGTTT
391 AGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTA--TCCTAATGAGAAGACTATGTTT
* *
1555399 ACGGTGCCTAATCCTGAAAAGAA
454 ATGGTGCCTAATCTTGAAAAGAA
* *
1555422 TGGAGATTTGTATGACTATTAATGTTTGTCATATTTAAGA-GACAAACTTTGATT-TGATCAAAA
1 TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAA-ATGACAAACTTTGATTCT-ATCAAAA
* * * * * *
1555485 ATGGTGGAAGGAAAAGCTTTTCTTGCGACAACAAAGCATCAATGTCATGTATCCGAATGAATGTA
64 ACGGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGA
* * * * * *** * *
1555550 ATGTGTTTTTTGTTCCTAATCTTGAAAAAAAACT-GAGATTATTATGGGAATTGAAG-ATTGTCT
129 ATGTGTTTTTGGTTCCCAATCTTG-AAAAGAA-TGGAGAGTGTTACAAGAATCGATGCA-TGTCT
* * * * *** * ** *
1555613 TGTTTCAAGG-ATGAACTTTGATTTTAAA-GAATATA-TGCAAAGAAA-AACTATTCATGCCGAG
191 TATTT-AAGGAAAGAACTTTGA-TTTAAAGGAAAATAGGGCAAAGAAATGGTTA-CCATGCAAAA
* * * * *
1555674 GAAAGTCATCAATATCATTTATCCTTATGAGGAGAATGTGTTTATGGTGCCTAATCAC-AAATGA
253 TAAAATCATCTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * *
1555738 ATGAAGATCATGACTAGAATCCATGTTTTTCTTGTTTGAGGAACGAACTTAGACTTTACAAAAAT
318 ATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAAT
* * ** * *
1555803 TTGTGGGAAAAAAGTGTTTCTTGCGAAACCAAAGCATCAACATCATGTATCCTAAAGAGAAGACT
383 TTGTAGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACT
*
1555868 ATGTTTATGGTGCCTAATTTTGAAAAGAA
448 ATGTTTATGGTGCCTAATCTTGAAAAGAA
* * * * *
1555897 TGAGGATTAGTATGACTATTCATGTTTGTCTTATTTAAATGATAAACTTTGTTTCTATCAAAAAC
1 TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
* * * * *
1555962 GATGGAAA-AAAATCTTTTCTTGCGATAGTAAAGCACCAATGTCATGTAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTAT
1556011 ACTTACAAAA
Statistics
Matches: 4029, Mismatches: 732, Indels: 179
0.82 0.15 0.04
Matches are distributed among these distances:
463 7 0.00
464 245 0.06
465 5 0.00
468 140 0.03
471 1 0.00
472 225 0.06
473 634 0.16
474 883 0.22
475 725 0.18
476 1134 0.28
477 30 0.01
ACGTcount: A:0.37, C:0.13, G:0.18, T:0.32
Consensus pattern (476 bp):
TGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCGATGCATGTCTTATTT
AAGGAAAGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAATGGTTACCATGCAAAATAAAATCA
TCTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
CATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATTTGTAGGA
AGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTTTAT
GGTGCCTAATCTTGAAAAGAA
Found at i:1553228 original size:159 final size:158
Alignment explanation
Indices: 1550704--1555984 Score: 794
Period size: 159 Copynumber: 33.4 Consensus size: 158
1550694 TAGTATAAGT
* * *
1550704 ATTAATGTTTGTCTTATTTAAAAGACAAACTTTGATTTTATCAAAAACGGT-GAAAAGAAAAGCT
1 ATTAATGTTTGTCTTATTT-AAGGACAAACTTTGATTCTATCAAAAATGGTAG-AAAGAAAAGCT
* ** * * * * * *
1550768 TTTCATGTGATAGC-TAAGCATTAATGTCATGTATCCTAATGAAGGGAATGCATTTTTGGTTCCC
64 TTTCTTGCAACA-CAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCCT
* * * * * *
1550832 AATGTTGAAAAGAATGGAGACTGTTACGATA
128 AATCTTGAAAAGAATTGAGATTATTATGAGA
* * *
1550863 ATCAATGTTAGTCTTATTTAAGGTA-AGAACTTTGATT-TAAT-GAAAATAGG--GCAAAGAAAA
1 ATTAATGTTTGTCTTATTTAAGG-ACA-AACTTTGATTCT-ATCAAAAAT-GGTAG-AAAGAAAA
* * * * * * ** * *
1550923 GATTACTT-TGTG-AA-AGAAAATCATC-A-ATCATTTATCCAAAT-ATGGAGAATGTGTTTATA
61 GCTT--TTCT-TGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGG-GAATGCATTTTTG
** *
1550982 GTGCCTAATC-ACAAAATGAA-TGAAGATCATTA-GTAGA
122 GTGCCTAATCTTGAAAA-GAATTG-AGATTATTATG-AGA
** * * * *
1551019 ATCCATGTTTATCTGATTTGAGGCACAAACTTAGACTT-TA-CAAAAATTGGCTAG-AA-AAAAG
1 ATTAATGTTTGTCTTATTTAAGG-ACAAACTTTGA-TTCTATCAAAAA-TGG-TAGAAAGAAAAG
* * * * * * * * ** *
1551080 CCTTTT-TTGTGAA-ACTAAAGCAACAGTATCATGTATACTTATG-AGAAGACTGTGTTTATGGT
62 -CTTTTCTTG-CAACACAAAAGCATCAATATCATGTATCCTAATGAAG-GGAATGCATTTTTGGT
* * * * **
1551142 GCCTAATCTTGAAAAGAA-TGGGGTTTTGTACGACT
124 GCCTAATCTTGAAAAGAATTGAGATTAT-TATGAGA
* * * * * * * *
1551177 ATTAAAGTTTCTCTTTTTTAAATGACAAACTTTAATTCTATAAAAAACGGTGGAAAGAAAAGCTT
1 ATTAATGTTTGTCTTATTT-AAGGACAAACTTTGATTCTATCAAAAATGGTAGAAAGAAAAGCTT
* ** * * *
1551242 GTCTTGTGACAACAAAA-CATCAATGTCATGTATCCTAATGAAGAGAAT-CTATTTTTGGTTCCC
65 TTCTTGCAAC-ACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGC-ATTTTTGG-TGCC
* * * *
1551305 T-ATCTTGAAAAGAATAGAGAGTATTGTAAGA
127 TAATCTTGAAAAGAATTGAGATTATTATGAGA
** *** * * * * *
1551336 ATCGATGCACGTCATATTTAAGGAAAGAATTTTGATT-TA-AAGGAAAATAGG--GCAAAGAAAT
1 ATTAATGTTTGTCTTATTTAAGGACA-AACTTTGATTCTATCA--AAAAT-GGTAG-AAAGAAAA
* ** * * * * ** * * ** * *
1551397 GGTTACCATT-CAAAATAAAATCTTCTGTATCATTTATCCTAATGAAGAGAATGTGTTTATAGTG
61 GCTTTTC-TTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTG
** *
1551461 CCTAATC-ACAAAATGAA-TGAAGATCATTACT-AGA
125 CCTAATCTTGAAAA-GAATTG-AGATTATTA-TGAGA
* * * * * * * * * * *
1551495 ATCCAA-GTATGTCTTCTTTGAGGAACGAGCTTAGACTT-TA-CAAAAGTTTGTTGGAAG-AAAG
1 AT-TAATGTTTGTCTTATTTAAGG-ACAAACTTTGA-TTCTATCAAAA-ATGGTAGAAAGAAAAG
* * *
1551556 CCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTACCCTAATG-A--GAA-GACTATGTTTATG
62 CTTTTCTTGC-AACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATG-C-AT-TTT-TG
* * * **
1551616 GTGCTTAATCTTGAAAAGAATAGGGATTATTATGACT
122 GTGCCTAATCTTGAAAAGAATTGAGATTATTATGAGA
* * * * *
1551653 ATTCATGTTTATCTT-TTTTA--ACAAACTTTGATTCTATCAAAAATGAT-GAAAAGAAAATCTT
1 ATTAATGTTTGTCTTATTTAAGGACAAACTTTGATTCTATCAAAAATGGTAG-AAAGAAAAGCTT
* * * ** *
1551714 TTCTTGCAACAGC-AATGCATAAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCTA
65 TTCTTGCAACA-CAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCCTA
* * ***
1551778 ATCTTGAAAGGAATGCTGAG--TGTTGCAAGA
129 ATCTTGAAAAGAAT--TGAGATTATTATGAGA
** * * * * *
1551808 ATCGATGCTTGTCTTATTTAAGGAAAGAACTTTCA-T-T-T---AAA-GG--GCAAAGAAATGGT
1 ATTAATGTTTGTCTTATTTAAGGACA-AACTTTGATTCTATCAAAAATGGTAG-AAAGAAAAGCT
** * * * * * * ** * *
1551864 TACCATGCAAAATAAAATCATCTATATCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCT
64 TTTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGG-GAATGCATTTTTGGTGCCT
* *
1551928 AATCAT-AAAATGAA-TGAAGATCATTACT-AGA
128 AATCTTGAAAA-GAATTG-AGATTATTA-TGAGA
* * * *
1551959 ATCT-ATGTTGGT-TTGATTTGAGGCACAAACTTAGACTT-TA-CAAAAATTGG-CGAGAAG-AA
1 AT-TAATGTTTGTCTT-ATTTAAGG-ACAAACTTTGA-TTCTATCAAAAA-TGGTAGA-AAGAAA
* * * * **
1552018 AGCTTTTCTTGCAAAACCAAAGCATTAATATCATGTATCCTTATG-A--GAAAACTATGTTTATG
60 AGCTTTTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGC-AT-TTT-TG
* * * * **
1552080 GTGCCTAATCCTAAAAAGAATGGGGATT-TGTATGACT
122 GTGCCTAATCTTGAAAAGAATTGAGATTAT-TATGAGA
* * *
1552117 ATTAATATTTGTCTTATTTAAGTGACAAACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTT
1 ATTAATGTTTGTCTTATTTAAG-GACAAACTTTGATTCTATCAAAAATGGTAGAAAGAAAAGCTT
* * *** * ** * * *
1552182 TTCATGCAACACCAAAGCATCAACGCCATGTATCTTAATGAAGGGAATGTGTTTTTTGTTCCCAA
65 TTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCCTAA
* * *
1552247 TCTTGAAAAGAATTGAAACTGTTATGAGA
130 TCTTGAAAAGAATTGAGATTATTATGAGA
* * ** ** * * ** * *
1552276 ATTGAA-GATTGTTTTATTTCCGGGATTAACTTTGGTTTTAAGGAAAATATGG--CAAAGAAAAA
1 ATT-AATGTTTGTCTTATTT-AAGGACAAACTTTGATTCT-ATCAAAA-ATGGTAGAAAGAAAAG
* ** * * * * * * * ** * * *
1552338 ATTTTCAAGTAGCAAAAAATCATCAATAGCATTTATCCTAATGAAGAGAATGTGTCTATAGTGCC
62 CTTTTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCC
** *** * ** *
1552403 TAAT-TACAAAATGAAAAAAAAACATTGCT-AGA
127 TAATCTTGAAAA-GAATTGAGATTATT-ATGAGA
** * * * * ** *
1552435 ATCCATG--TGTCTTATTTGAAGAACGAACTTAGACAT-TA-CAAAAATTTATAGGAAG-AAAGC
1 ATTAATGTTTGTCTTATTT-AAGGACAAACTTTGA-TTCTATCAAAAA-TGGTAGAAAGAAAAGC
* * * * *
1552495 CTTTCTTGCGAACACAAAA-TATCAACATCATGCATCCT-A--AAGAGAA-GACTATGTTTATGG
63 TTTTCTTGC-AACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATG-C-AT-TTT-TGG
**
1552555 TGCCTAATCTTGAAAAGAA-TGAGGATT-TGTATGACT
123 TGCCTAATCTTGAAAAGAATTGA-GATTAT-TATGAGA
* * * * * * * *
1552591 ATTCATTTTTGTCTTATTTAAATGAAAAACTTTGATTCTATCAAAAACGGTGGAAATAAAATCTT
1 ATTAATGTTTGTCTTATTT-AAGGACAAACTTTGATTCTATCAAAAATGGTAGAAAGAAAAGCTT
** * * * **
1552656 TTCTTGTGACA-ACATAGCATCAATGTCATGTATCCTAATGAAGGTAATGTGTTTTTGGT-CCTA
65 TTCTTGCAACACA-AAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCCTA
* * * * **
1552719 ATCATGAAAAGAATGGAGAGTGTTACAAGA
129 ATCTTGAAAAGAATTGAGATTATTATGAGA
** * * * * *
1552749 ATCGATGCTTGTCTTATTTAAGGAAAGAACTTTGATT-TA-AAGGAAAATAAGG--CAAAGAAAT
1 ATTAATGTTTGTCTTATTTAAGGACA-AACTTTGATTCTATCA--AAAAT--GGTAGAAAGAAAA
* ** * * * * * * * * ** * *
1552810 GGTTACCATGCAAAATAAAATCATCTATATCATTTATCGTAATG-AGGAGGATGTGTTTATAGTG
61 GCTTTTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGG-GAATGCATTTTTGGTG
* ** * * * * *
1552874 CATAATC-ACAACATGAA-AGAAGATCATTGCT-AGG
125 CCTAATCTTGAA-AAGAATTG-AGATTATT-ATGAGA
* * *
1552908 ATCT-ATGTTTGTCTGATTTGA-GACACGAACTTAT-ACTT-TA-CAAAAATTGGCCAG-AAG-A
1 AT-TAATGTTTGTCTTATTTAAGGACA--AACTT-TGA-TTCTATCAAAAA-TGG-TAGAAAGAA
* * *
1552966 AAGCCTTTCTTGCGAA-TC-AAAGCATCAATATCGA-GTATCCTTATG-A--GAA-GACTATGTT
59 AAGCTTTTCTTGC-AACACAAAAGCATCAATATC-ATGTATCCTAATGAAGGGAATG-C-AT-TT
* * ** * * **
1553024 TATGGTGCCTAATCCTAAAAAGAAAAGGGATT-TGTTTGACT
119 T-TGGTGCCTAATCTTGAAAAGAATTGAGATTAT-TATGAGA
*
1553065 ATTAATGTTTGTCTTATTTAAGAGACAAACTTTGATTCGATCAAAAATGGTAGAAAGAAAAGCTT
1 ATTAATGTTTGTCTTATTTAAG-GACAAACTTTGATTCTATCAAAAATGGTAGAAAGAAAAGCTT
* * * * * * * *
1553130 TTCTTGCAACACCAAAGCGTCAATGTAATGTATCCAAATGAAGGGAATGCATTTTTTGTTCCCAA
65 TTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCCTAA
*
1553195 TCTTGAAAAGAATTGAGATTGTTATGAGA
130 TCTTGAAAAGAATTGAGATTATTATGAGA
* * * ** * ** * *
1553224 ATTAAAGATTGTCTTTTTTCAAGGATGAAC-TTGATTTTAAGGAAAATATGG--CAAAGAAAA-A
1 ATTAATGTTTGTCTTATTT-AAGGACAAACTTTGATTCT-ATCAAAA-ATGGTAGAAAGAAAAGC
* * * * * * * ** * *
1553285 TTTTCATGTAGCAGAAAATCATTAATATCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCC
63 TTTTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGG-GAATGCATTTTTGGTGCC
* * * ** *
1553349 GAATCAT-AAATGAATAAAGATCATTACTGTAG-
127 TAATCTTGAAAAGAATTGAGATTATTA-TG-AGA
** * * * * * * * * *
1553381 -TCCATGCTTGTATTATTTGAGGAACCAACTTAGATTTTA-CAAAAAT-TTATGGGAAG-AAGGC
1 ATTAATGTTTGTCTTATTTAAGG-ACAAACTTTGATTCTATCAAAAATGGTA--GAAAGAAAAGC
* * * *
1553442 CTTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTAATG-AGAGGACTATG--TTTATGGTG
63 TTTTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAG-GGA--ATGCATTTTTGGTG
* * * **
1553504 CCTAATCTTGAAAAGAATGGGGATTAATATGACT
125 CCTAATCTTGAAAAGAATTGAGATTATTATGAGA
* * * * * *
1553538 ATTCATGTTTGTCTTATTTAAATGACAAACTTTAATTCTATAAAAAATGGTGGAAAGAAAAGCAT
1 ATTAATGTTTGTCTTATTT-AAGGACAAACTTTGATTCTATCAAAAATGGTAGAAAGAAAAGCTT
* * ** * * * * ** *
1553603 TTCTTTCGACAGTAAAGCATCAATGTGATTTATCCTAATGAAGGAAATGTGTTTTTGGT-TCTCA
65 TTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCCT-A
* * * * **
1553667 ATCTTGAAAATAATGGAGAGTGTTACAAGA
129 ATCTTGAAAAGAATTGAGATTATTATGAGA
* * ** *
1553697 ATCT-ATGCTTGTCTTATTTAAGGAAAGAACTTTGATTC-AAAAGAAAATAGG--GCAAAGAAAT
1 AT-TAATGTTTGTCTTATTTAAGGACA-AACTTTGATTCTATCA-AAAAT-GGTAG-AAAGAAAA
* * * * * * ** * * * * *
1553758 GGTTTACATGCAAAATAAAATCATCCGTATCATTTATCCTAATAAAGAGAATGTGC-TTATT-AT
61 GCTTTTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAA--TGCATTTTTGGT
* *
1553821 GCCTAATCAT-AAAATGAA-TGAAGATCATTACT-AGA
124 GCCTAATCTTGAAAA-GAATTG-AGATTATTA-TGAGA
** * * * * *
1553856 ATCCATGTTTGTCTGATTTGAGGCACGAACTTAGACTT-TA-CAAAAATTGGTAGGAAG-AAAGC
1 ATTAATGTTTGTCTTATTTAAGG-ACAAACTTTGA-TTCTATCAAAAA-TGGTAGAAAGAAAAG-
* *
1553918 CTTTT-TTGCAAAACAAAAGCATCAATATCATGTATCCTTATG-A--GAA-GACTATGTTTATGG
62 CTTTTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATG-C-AT-TTT-TGG
* * * * * **
1553978 TGCCAAATCCTGAAAATAATAGGGATT-TGTATGACT
123 TGCCTAATCTTGAAAAGAATTGAGATTAT-TATGAGA
* * * * *
1554014 ATTAATGTTTTTCATATTTAAGAGACAAACTTTGATTCAATCAACAATGGTGGAAAGAAAAGCTT
1 ATTAATGTTTGTCTTATTTAAG-GACAAACTTTGATTCTATCAAAAATGGTAGAAAGAAAAGCTT
* * * * * ** *
1554079 TTCTTGAAACACTAAAGCATCAATGTAATGTATCCAAATGAAGGGAATGCATTTTTCTTTCCTAA
65 TTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCCTAA
*
1554144 TCTTGAAAAGAATTGAGATTGTTATGAGA
130 TCTTGAAAAGAATTGAGATTATTATGAGA
* * * ** *
1554173 ATTGAA-GATTGTCTTATTTCAAGGAGGAAA-TTTGATTTTAAAGAAAATATGG--CAAAGAAAA
1 ATT-AATGTTTGTCTTATTT-AAGGA-CAAACTTTGATTCT-ATCAAAA-ATGGTAGAAAGAAAA
* * * * * * * * * ** * *
1554234 -ATTTTCATGCAGCAGAAAATCATTAATATCATTTATCCTACTG-AGCAGAATGTGTTTATAGTG
61 GCTTTTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAG-GGAATGCATTTTTGGTG
* ** * ** * *
1554297 CCGAATC-ACAAATGAATAAAGATCATTACT-ATA
125 CCTAATCTTGAAAAGAATTGAGATTATTA-TGAGA
* ** * * * * * * * * *
1554330 GTCCATGTTTGTATTTTTTGAGAAACTAACTTAGATTTTA-CAAAAAT-TTAATGGAAG-AAAGC
1 ATTAATGTTTGTCTTATTTAAG-GACAAACTTTGATTCTATCAAAAATGGT-A-GAAAGAAAAGC
* * * * * *
1554392 CTTTCTTGCGAA-ACCAAAGCATTAACATCATGTGTCCT-A--AAGAGAA-GACTATGTTTATGG
63 TTTTCTTGC-AACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATG-C-AT-TTT-TGG
* * * **
1554452 TGCCTAATTTTGAAAGGAA-TGAGTATTAGTATGACT
123 TGCCTAATCTTGAAAAGAATTGAG-ATTATTATGAGA
* * * * **
1554488 ATTAATGTTTGCCTTATTTAAATGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAATATT
1 ATTAATGTTTGTCTTATTT-AAGGACAAACTTTGATTCTATCAAAAATGGTAGAAAGAAAAGCTT
* * ** * * * ** * *
1554553 TTCTTGCGATAGTAAAGCATCAATGTCTTGTATACTAATGAAGGGAATGTGTTTTTGGTTCCCAA
65 TTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCCTAA
* * * **
1554618 TCTTGAAAAGAATGGAGAGTGTTACAAGA
130 TCTTGAAAAGAATTGAGATTATTATGAGA
*** * * ** ** * *
1554647 GCCAATGCTTGTCTTATTTAAGGAAAAAACTTTGGATTAAAGGAAAATAAGGCA-AAA-AAATAG
1 ATTAATGTTTGTCTTATTTAAGG-ACAAACTTT-GATTCTATCAAAA-ATGGTAGAAAGAAA-AG
** * * * * ** * * * ** * *
1554710 -TTACCATGCAAAATAAAATCATGTGA-ATCGTTTATCCTAATG-AGGAGAACGTGTTTATAGTG
62 CTTTTCTTGCAACACAAAAGCAT-CAATATCATGTATCCTAATGAAGG-GAATGCATTTTTGGTG
** * *
1554772 CCTAATC-ACAAAATGAA-TGAAGATCATT-TCTAGA
125 CCTAATCTTGAAAA-GAATTG-AGATTATTAT-GAGA
** ** ** *
1554806 ATCCATGTTTGTCTTATTCGAGGA-ATGAACTTAAACTT-TA-CAAAAAT-GTATGGGAAG-AAA
1 ATTAATGTTTGTCTTATTTAAGGACA--AACTTTGA-TTCTATCAAAAATGGTA--GAAAGAAAA
* * * * *
1554866 GCCTTTCTTGCAAAACCAAACCATCAATATCGTGTATCCTAATG-A--GAA-GCCTATGTTTATG
61 GCTTTTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATG-C-AT-TTT-TG
* * * * **
1554927 GTGCCTAATCTTGAAAAGAATGGGGATTAGTATAACT
122 GTGCCTAATCTTGAAAAGAATTGAGATTATTATGAGA
* * * * * ** *
1554964 ATTCATGTTTATCTTACTTAAACGACAAACTTTCATTCTATCAAAAACAGTGGAAAGAAAAGCTT
1 ATTAATGTTTGTCTTA-TTTAAGGACAAACTTTGATTCTATCAAAAATGGTAGAAAGAAAAGCTT
* * * ** * *
1555029 TTCTTGCAACAGC-AAAGCATCAATGTCATGTATCTTGATGAAGGGAATGTGTTTTTGGTTCCCA
65 TTCTTGCAACA-CAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCCTA
* * * ***
1555093 ATCTTGAAAAGAATGGAGAGTGTTGCAAGA
129 ATCTTGAAAAGAATTGAGATTATTATGAGA
** * * *
1555123 ATCGATGCTTGTCATATTTAAGGGA-AGAACTTTGATT-TA-AAGGAAAATAGG--GCAAAGAAA
1 ATTAATGTTTGTCTTATTTAA-GGACA-AACTTTGATTCTATCA--AAAAT-GGTAG-AAAGAAA
* * ** * * * * * ** * * * *
1555183 TGGTTACCATGCAAAATAAAATCGTCTGTATCATTTATCCTAATG-AGGAGAATGTATTTATCGT
60 AGCTTTTCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGG-GAATGCATTTTTGGT
** *
1555247 GCCTAATC-ACAAAATGAA-TGAAGATCATTACT-AGA
124 GCCTAATCTTGAAAA-GAATTG-AGATTATTA-TGAGA
** * * ** ** * * * *
1555282 ATCCATGTTTCTCTGATTTGGGGATGAACTTAGACTT-TA-CAAAACTCAGTAGAAAG-AAAGCC
1 ATTAATGTTTGTCTTATTTAAGGACAAACTTTGA-TTCTATCAAAAAT-GGTAGAAAGAAAAGCT
* * * * *
1555344 GTTCTTGCGAA-ACCAAAGCATCAATA--GTGTATGTCCTTATG-A--GAA-GACTATGTTTACG
64 TTTCTTGC-AACACAAAAGCATCAATATCATGTA--TCCTAATGAAGGGAATG-C-AT-TTT-TG
* * **
1555402 GTGCCTAATCCTGAAAAGAATGGAGATT-TGTATGACT
122 GTGCCTAATCTTGAAAAGAATTGAGATTAT-TATGAGA
* * *
1555439 ATTAATGTTTGTCATATTTAAGAGACAAACTTTGATT-TGATCAAAAATGGTGGAAGGAAAAGCT
1 ATTAATGTTTGTCTTATTTAAG-GACAAACTTTGATTCT-ATCAAAAATGGTAGAAAGAAAAGCT
* * * * * ** * *
1555503 TTTCTTGCGACA-ACAAAGCATCAATGTCATGTATCCGAATGAATGTAATGTGTTTTTTGTTCCT
64 TTTCTTGCAACACA-AAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCCT
* * *
1555567 AATCTTGAAAAAAAACTGAGATTATTATGGGA
128 AATCTTG-AAAAGAATTGAGATTATTATGAGA
* * ** *
1555599 ATTGAA-GATTGTCTTGTTTCAAGGATGAACTTTGATT-T-T-AAAGAAT-ATATGCAAAGAAAA
1 ATT-AATGTTTGTCTTATTT-AAGGACAAACTTTGATTCTATCAAA-AATGGTA-G-AAAGAAAA
* * * ** * * ** *
1555659 ACTATTCATGC--CGAGGAAAGTCATCAATATCATTTATCCTTATG-AGGAGAATGTGTTTATGG
61 GCTTTTCTTGCAAC-ACAAAAG-CATCAATATCATGTATCCTAATGAAGG-GAATGCATTTTTGG
** * * *
1555721 TGCCTAATC-ACAAATGAA-TGAAGATCATGACT-AGA
123 TGCCTAATCTTGAAAAGAATTG-AGATTATTA-TGAGA
** * * * * * * * *
1555756 ATCCATGTTTTTCTTGTTTGAGGAACGAACTTAGACTT-TA-CAAAAATTTGTGGGAA-AAAAG-
1 ATTAATGTTTGTCTTATTTAAGG-ACAAACTTTGA-TTCTATCAAAAA-TGGTAGAAAGAAAAGC
* * *
1555817 TGTTTCTTGCGAA-ACCAAAGCATCAACATCATGTATCCT-A--AAGAGAA-GACTATGTTTATG
63 T-TTTCTTGC-AACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATG-C-AT-TTT-TG
* * **
1555877 GTGCCTAATTTTGAAAAGAA-TGAGGATTAGTATGACT
122 GTGCCTAATCTTGAAAAGAATTGA-GATTATTATGAGA
* * * * * * * *
1555914 ATTCATGTTTGTCTTATTTAAATGATAAACTTTGTTTCTATCAAAAACGATGGAAA-AAAATCTT
1 ATTAATGTTTGTCTTATTT-AAGGACAAACTTTGATTCTATCAAAAATGGTAGAAAGAAAAGCTT
1555978 TTCTTGC
65 TTCTTGC
1555985 GATAGTAAAG
Statistics
Matches: 3582, Mismatches: 1129, Indels: 823
0.65 0.20 0.15
Matches are distributed among these distances:
148 2 0.00
149 2 0.00
150 8 0.00
151 88 0.02
152 5 0.00
153 20 0.01
154 39 0.01
155 136 0.04
156 222 0.06
157 526 0.15
158 952 0.27
159 1334 0.37
160 183 0.05
161 32 0.01
162 27 0.01
163 6 0.00
ACGTcount: A:0.37, C:0.13, G:0.18, T:0.32
Consensus pattern (158 bp):
ATTAATGTTTGTCTTATTTAAGGACAAACTTTGATTCTATCAAAAATGGTAGAAAGAAAAGCTTT
TCTTGCAACACAAAAGCATCAATATCATGTATCCTAATGAAGGGAATGCATTTTTGGTGCCTAAT
CTTGAAAAGAATTGAGATTATTATGAGA
Found at i:1554453 original size:950 final size:946
Alignment explanation
Indices: 1550687--1556010 Score: 6113
Period size: 950 Copynumber: 5.6 Consensus size: 946
1550677 AAGAAAATAG
* * * *
1550687 TGGGGATTAGTATAAGTATTAATGTTTGTCTTATTTAAAAGACAAACTTTGATTTTATCAAAAAC
1 TGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
* * * * * *
1550752 GGTGAAAAGAAAAGCTTTTCATGTGATAGCTAAGCATTAATGTCATGTATCCTAATGAAGGGAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
** * * * *
1550817 GCATTTTTGGTTCCCAATGTTGAAAAGAATGGAGACTGTTACGATAATCAATG-TTAGTCTTATT
131 GTGTTTTTGGTT-CCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCAATGCTT-GTCTTATT
* * * ** ** *
1550881 TAAGGTAAGAACTTTGATTTAATGAAAATAGGGCAAAGAAA-AGATTACTTTGTGAAAGAAAATC
194 TAAGGAAAGAACTTTGATTAAAAGAAAATAGGGCAAAGAAATAG-TTACCATGCAAAATAAAATC
*
1550945 ATC-A-ATCATTTATCCAAAT-ATGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
258 ATCTATATCATTTATCCTAATGA-GGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
* * *
1551007 ATCATTAGTAGAATCCATGTTTATCTGATTTGAGGCACAAACTTAGACTTTACAAAAATTGGCTA
322 ATCATTACTAGAATCCATGTTTGTCTGATTTGAGGCACGAACTTAGACTTTACAAAAATTGG-TA
* * ** * * * * *
1551072 -GAAAAAAGCCTTTTTTGTGAAACTAAAGCAACAGTATCATGTATACTTATGAGAAGACTGTGTT
386 GGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTT
* * * * * *
1551136 TATGGTGCCTAATCTTGAAAAGAATGGGGTTTTGTACGACTATTAAAGTTTCTCTTTTTTAAATG
451 TATGGTGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATG
* * * ** *
1551201 ACAAACTTTAATTCTATAAAAAACGGTGGAAAGAAAAGCTTGTCTTGTGACAACAAAACATCAAT
516 ACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCAAC-ACAAAGCATCAAT
* * * * *
1551266 GTCATGTATCCTAATGAAGAGAAT-CTATTTTTGGTTCCCTATCTTGAAAAGAATAGAGAGTATT
580 GTCATGTATCCTAATGAAGGGAATGC-ATTTTT-TTTCCCAATCTTGAAAAGAATTGAGAGTGTT
* * * * * * * *
1551330 GTAAGAATCGATGCA-CGTCATATTT-AAGGAAAGAATTTTGA-TTTAAAGGAAAATAGGGCAAA
643 ATGAGAATTGAAG-ATTGTCTTATTTCAAGG-AAGAAATTTGATTTTAAA-GAAAATATGGCAAA
** ** * ** * **
1551392 GAAATGGTTACCATTCAAAATAAAATC-TTCTGTATCATTTATCCTAATGAAGAGAATGTGTTTA
705 GAAA-AATTTTCATGCAGCAGAAAATCATT-AATATCATTTATCCTAATG-AGAGAATGTGTTTA
* * * *
1551456 TAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAAGTATGTCTTCTTTGAGGAAC
767 TAGTGCCTAATCACAAAATGAATAAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAAC
* * * *
1551521 GAGCTTAGACTTTACAAAAGTTTGTTGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATC
832 GAACTTAGACTTTACAAAAATTTATAGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATC
* *
1551586 ATGTACCCTAATGAGAAGACTATGTTTATGGTGCTTAATCTTGAAAAGAA
897 ATGTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAA
* * * * * *
1551636 TAGGGATTATTATGACTATTCATGTTTATCTT-TTT---TAACAAACTTTGATTCTATCAAAAAT
1 TGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
* * * * * *
1551697 GATGAAAAGAAAATCTTTTCTTGCAACAGCAATGCATAAATGTCATGTATCCTAATGAAGGGAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* ** * *
1551762 GTGTTTTTGGTTCCTAATCTTGAAAGGAATGCTGAGTGTTGCAAGAATCGATGCTTGTCTTATTT
131 GTGTTTTTGGTTCC-AATCTTGAAAAGAATGGAGAGTGTTACAAGAATCAATGCTTGTCTTATTT
* * *
1551827 AAGGAAAGAACTTTCATT------TAA-AGGGCAAAGAAATGGTTACCATGCAAAATAAAATCAT
195 AAGGAAAGAACTTTGATTAAAAGAAAATAGGGCAAAGAAATAGTTACCATGCAAAATAAAATCAT
*
1551885 CTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCATAAAATGAATGAAGATC
260 CTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
* * * * *
1551950 ATTACTAGAATCTATGTTGGTTTGATTTGAGGCACAAACTTAGACTTTACAAAAATTGG-CGAGA
325 ATTACTAGAATCCATGTTTGTCTGATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTAG-GA
* * *
1552014 AGAAAGCTTTTCTTGCAAAACCAAAGCATTAATATCATGTATCCTTATGAGAAAACTATGTTTAT
389 AGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTTTAT
* * *
1552079 GGTGCCTAATCCTAAAAAGAATGGGGATTTGTATGACTATTAATATTTGTCTTATTTAAGTGACA
454 GGTGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATGACA
* * * * *
1552144 AACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCATGCAACACCAAAGCATCAACGCC
519 AACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCAACA-CAAAGCATCAATGTC
* ** * *
1552209 ATGTATCTTAATGAAGGGAATGTGTTTTTTGTTCCCAATCTTGAAAAGAATTGAAACTGTTATGA
583 ATGTATCCTAATGAAGGGAATGCATTTTTT-TTCCCAATCTTGAAAAGAATTGAGAGTGTTATGA
* ** ** * * *
1552274 GAATTGAAGATTGTTTTATTTCCGGGATTAACTTTGGTTTTAAGGAAAATATGGCAAAGAAAAAA
647 GAATTGAAGATTGTCTTATTTCAAGGAAGAAATTTGATTTTAAAGAAAATATGGCAAAG-AAAAA
* * * * * *
1552339 TTTTCAAGTAGCAAAAAATCATCAATAGCATTTATCCTAATGAAGAGAATGTGTCTATAGTGCCT
711 TTTTCATGCAGCAGAAAATCATTAATATCATTTATCCTAATG-AGAGAATGTGTTTATAGTGCCT
* * * * * *
1552404 AATTACAAAATGAAAAAAAAACATTGCTAGAATCCATG--TGTCTTATTTGAAGAACGAACTTAG
775 AATCACAAAATGAATAAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAG
* ** * *
1552467 ACATTACAAAAATTTATAGGAAGAAAGCCTTTCTTGCG-AACACAAAATATCAACATCATGCATC
840 ACTTTACAAAAATTTATAGGAAGAAAGCCTTTCTTGCGAAAC-CAAAGCATCAATATCATGTATC
*
1552531 CTAAAGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAA
904 CTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAA
* * * * *
1552574 TGAGGATTTGTATGACTATTCATTTTTGTCTTATTTAAATGAAAAACTTTGATTCTATCAAAAAC
1 TGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
* * * * * *
1552639 GGTGGAAATAAAATCTTTTCTTGTGACAACATAGCATCAATGTCATGTATCCTAATGAAGGTAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* *
1552704 GTGTTTTTGG-TCCTAATCATGAAAAGAATGGAGAGTGTTACAAGAATCGATGCTTGTCTTATTT
131 GTGTTTTTGGTTCC-AATCTTGAAAAGAATGGAGAGTGTTACAAGAATCAATGCTTGTCTTATTT
* * *
1552768 AAGGAAAGAACTTTGATTTAAAGGAAAATAAGGCAAAGAAATGGTTACCATGCAAAATAAAATCA
195 AAGGAAAGAACTTTGA-TTAAAAGAAAATAGGGCAAAGAAATAGTTACCATGCAAAATAAAATCA
* * * * *
1552833 TCTATATCATTTATCGTAATGAGGAGGATGTGTTTATAGTGCATAATCACAACATGAAAGAAGAT
259 TCTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* * * * * *
1552898 CATTGCTAGGATCTATGTTTGTCTGATTTGAGACACGAACTTATACTTTACAAAAATTGGCCA-G
324 CATTACTAGAATCCATGTTTGTCTGATTTGAGGCACGAACTTAGACTTTACAAAAATTGG-TAGG
* *
1552962 AAGAAAGCCTTTCTTGC-GAATCAAAGCATCAATATCGA-GTATCCTTATGAGAAGACTATGTTT
388 AAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATC-ATGTATCCTTATGAGAAGACTATGTTT
* ** *
1553025 ATGGTGCCTAATCCTAAAAAGAAAAGGGATTTGTTTGACTATTAATGTTTGTCTTATTTAAGA-G
452 ATGGTGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAA-ATG
* * * *
1553089 ACAAACTTTGATTCGATCAAAAATGGTAGAAAGAAAAGCTTTTCTTGCAACACCAAAGCGTCAAT
516 ACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCAACA-CAAAGCATCAAT
* * *
1553154 GTAATGTATCCAAATGAAGGGAATGCATTTTTTGTTCCCAATCTTGAAAAGAATTGAGATTGTTA
580 GTCATGTATCCTAATGAAGGGAATGCATTTTTT-TTCCCAATCTTGAAAAGAATTGAGAGTGTTA
* * * * *
1553219 TGAGAATTAAAGATTGTCTTTTTTCAAGGATG-AACTTGATTTTAAGGAAAATATGGCAAAGAAA
644 TGAGAATTGAAGATTGTCTTATTTCAAGGAAGAAATTTGATTTTAAAGAAAATATGGCAAAGAAA
*
1553283 AATTTTCATGTAGCAGAAAATCATTAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGC
709 AATTTTCATGCAGCAGAAAATCATTAATATCATTTATCCTAATGA-GAGAATGTGTTTATAGTGC
* * * * * *
1553348 CGAATCA-TAAATGAATAAAGATCATTACT-GTAGTCCATGCTTGTATTATTTGAGGAACCAACT
773 CTAATCACAAAATGAATAAAGATCATTACTAG-AATCCATGTTTGTCTTATTTGAGGAACGAACT
* * * *
1553411 TAGATTTTACAAAAATTTATGGGAAGAAGGCCTTTCTTGCAAAACCAAAGCATCAATATCATGTA
837 TAGACTTTACAAAAATTTATAGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTA
*
1553476 TCCTAATGAGAGGACTATGTTTATGGTGCCTAATCTTGAAAAGAA
902 TCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAA
* * * * *
1553521 TGGGGATTAATATGACTATTCATGTTTGTCTTATTTAAATGACAAACTTTAATTCTATAAAAAAT
1 TGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
* * * * * *
1553586 GGTGGAAAGAAAAGCATTTCTTTCGACAGTAAAGCATCAATGTGATTTATCCTAATGAAGGAAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* *
1553651 GTGTTTTTGGTTCTCAATCTTGAAAATAATGGAGAGTGTTACAAGAATCTATGCTTGTCTTATTT
131 GTGTTTTTGGTTC-CAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCAATGCTTGTCTTATTT
*
1553716 AAGGAAAGAACTTTGATTCAAAAGAAAATAGGGCAAAGAAATGGTTTA-CATGCAAAATAAAATC
195 AAGGAAAGAACTTTGATT-AAAAGAAAATAGGGCAAAGAAATAG-TTACCATGCAAAATAAAATC
** * * * *
1553780 ATCCGTATCATTTATCCTAATAAAGAGAATGTGCTTATTA-TGCCTAATCATAAAATGAATGAAG
258 ATCTATATCATTTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAATGAATGAAG
1553844 ATCATTACTAGAATCCATGTTTGTCTGATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTAG
322 ATCATTACTAGAATCCATGTTTGTCTGATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTAG
* *
1553909 GAAGAAAGCCTTTTTTGCAAAACAAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTTT
387 GAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTTT
* * * * *
1553974 ATGGTGCCAAATCCTGAAAATAATAGGGATTTGTATGACTATTAATGTTTTTCATATTTAAGA-G
452 ATGGTGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAA-ATG
* * * *
1554038 ACAAACTTTGATTCAATCAACAATGGTGGAAAGAAAAGCTTTTCTTGAAACACTAAAGCATCAAT
516 ACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCAACAC-AAAGCATCAAT
* * * *
1554103 GTAATGTATCCAAATGAAGGGAATGCATTTTTCTTTCCTAATCTTGAAAAGAATTGAGATTGTTA
580 GTCATGTATCCTAATGAAGGGAATGCATTTTT-TTTCCCAATCTTGAAAAGAATTGAGAGTGTTA
*
1554168 TGAGAATTGAAGATTGTCTTATTTCAAGGAGGAAATTTGATTTTAAAGAAAATATGGCAAAGAAA
644 TGAGAATTGAAGATTGTCTTATTTCAAGGAAGAAATTTGATTTTAAAGAAAATATGGCAAAGAAA
*
1554233 AATTTTCATGCAGCAGAAAATCATTAATATCATTTATCCTACTGAGCAGAATGTGTTTATAGTGC
709 AATTTTCATGCAGCAGAAAATCATTAATATCATTTATCCTAATGAG-AGAATGTGTTTATAGTGC
* * * * * * *
1554298 CGAATCAC-AAATGAATAAAGATCATTACTATAGTCCATGTTTGTATTTTTTGAGAAACTAACTT
773 CTAATCACAAAATGAATAAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTT
* * * *
1554362 AGATTTTACAAAAATTTA-ATGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATTAACATCATGTG
838 AGACTTTACAAAAATTTATA-GGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTA
* * *
1554426 TCCTAAAGAGAAGACTATGTTTATGGTGCCTAATTTTGAAAGGAA
902 TCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAA
* * *
1554471 TGAGTATTAGTATGACTATTAATGTTTGCCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
1 TGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
** * * * *
1554536 GGTGGAAAGAAAATATTTTCTTGCGATAGTAAAGCATCAATGTCTTGTATACTAATGAAGGGAAT
66 GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
**
1554601 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAGCCAATGCTTGTCTTATTT
131 GTGTTTTTGGTT-CCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCAATGCTTGTCTTATTT
* * * *
1554666 AAGGAAAAAACTTTGGATTAAAGGAAAATAAGGCAAAAAAATAGTTACCATGCAAAATAAAATCA
195 AAGGAAAGAACTTT-GATTAAAAGAAAATAGGGCAAAGAAATAGTTACCATGCAAAATAAAATCA
* * *
1554731 TGTGA-ATCGTTTATCCTAATGAGGAGAACGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
259 TCT-ATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
* * * * * *
1554795 TCATTTCTAGAATCCATGTTTGTCTTATTCGAGGAATGAACTTAAACTTTACAAAAA-T-GTATG
323 TCATTACTAGAATCCATGTTTGTCTGATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTA--
* * * *
1554858 GGAAGAAAGCCTTTCTTGCAAAACCAAACCATCAATATCGTGTATCCTAATGAGAAGCCTATGTT
386 GGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTT
* * * * * * *
1554923 TATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATAACTATTCATGTTTATCTTACTTAAACG
451 TATGGTGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATG
* *
1554988 ACAAACTTTCATTCTATCAAAAACAGTGGAAAGAAAAGCTTTTCTTGCAACAGCAAAGCATCAAT
516 ACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCAACA-CAAAGCATCAAT
* * ** * * *
1555053 GTCATGTATCTTGATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAGTGTTG
580 GTCATGTATCCTAATGAAGGGAATGCATTTTT-TTTCCCAATCTTGAAAAGAATTGAGAGTGTTA
** * * * * * *
1555118 CAAGAATCGATGCTTGTCATATTT-AAGGGAAGAACTTTGA-TTTAAAGGAAAATAGGGCAAAGA
644 TGAGAATTGAAGATTGTCTTATTTCAA-GGAAGAAATTTGATTTTAAA-GAAAATATGGCAAAGA
** ** ** * * * * *
1555181 AATGGTTACCATGCAAAATAAAATCGTCT-GTATCATTTATCCTAATGAGGAGAATGTATTTATC
707 AA-AATTTTCATGCAGCAGAAAATCAT-TAATATCATTTATCCTAATGA-GAGAATGTGTTTATA
* * * * *
1555245 GTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTCTCTGATTTG-GGGATGA
769 GTGCCTAATCACAAAATGAATAAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGA
* * * * *
1555309 ACTTAGACTTTAC-AAAACTCAGTAGAAAGAAAGCCGTTCTTGCGAAACCAAAGCATCAATA--G
834 ACTTAGACTTTACAAAAATTTA-TAGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCA
* * *
1555371 TGTATGTCCTTATGAGAAGACTATGTTTACGGTGCCTAATCCTGAAAAGAA
898 TGTA--TCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAA
* * *
1555422 TGGAGATTTGTATGACTATTAATGTTTGTCATATTTAAGA-GACAAACTTTGATT-TGATCAAAA
1 TGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAA-ATGACAAACTTTGATTCT-ATCAAAA
* * * * * *
1555485 ATGGTGGAAGGAAAAGCTTTTCTTGCGACAACAAAGCATCAATGTCATGTATCCGAATGAATGTA
64 ACGGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGA
* * * * *** * *
1555550 ATGTGTTTTTTGTTCCTAATCTTGAAAAAAAACT-GAGATTATTATGGGAATTGAA-GATTGTCT
129 ATGTGTTTTTGGTTCC-AATCTTG-AAAAGAA-TGGAGAGTGTTACAAGAA-TCAATGCTTGTCT
* * * * * ** * ** **
1555613 TGTTTCAAGG-ATGAACTTTGATTTTAAAGAATATA-TGCAAAGAAA-AACTATTCATGCCGAGG
190 TATTT-AAGGAAAGAACTTTGA-TTAAAAGAAAATAGGGCAAAGAAATAGTTA-CCATGCAAAAT
* * * *
1555675 AAAGTCATCAATATCATTTATCCTTATGAGGAGAATGTGTTTATGGTGCCTAATCAC-AAATGAA
252 AAAATCATCTATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * *
1555739 TGAAGATCATGACTAGAATCCATGTTTTTCTTG-TTTGAGGAACGAACTTAGACTTTACAAAAAT
317 TGAAGATCATTACTAGAATCCATGTTTGTC-TGATTTGAGGCACGAACTTAGACTTTACAAAAAT
* * * ** * * * *
1555803 TTGTGGGAAAAAAGTGTTTCTTGCGAAACCAAAGCATCAACATCATGTATCCTAAAGAGAAGACT
381 TGGTAGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACT
** * * *
1555868 ATGTTTATGGTGCCTAATTTTGAAAAGAATGAGGATTAGTATGACTATTCATGTTTGTCTTATTT
446 ATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTT
* * * * * * *
1555933 AAATGATAAACTTTGTTTCTATCAAAAACGATGGAAA-AAAATCTTTTCTTGCGATAGTAAAGCA
511 AAATGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCAACA-CAAAGCA
*
1555997 CCAATGTCATGTAT
575 TCAATGTCATGTAT
1556011 ACTTACAAAA
Statistics
Matches: 3763, Mismatches: 527, Indels: 170
0.84 0.12 0.04
Matches are distributed among these distances:
937 3 0.00
938 170 0.05
939 9 0.00
940 441 0.12
941 76 0.02
942 90 0.02
944 3 0.00
945 167 0.04
946 68 0.02
947 264 0.07
948 483 0.13
949 499 0.13
950 1055 0.28
951 341 0.09
952 87 0.02
953 7 0.00
ACGTcount: A:0.37, C:0.13, G:0.18, T:0.32
Consensus pattern (946 bp):
TGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAATGACAAACTTTGATTCTATCAAAAAC
GGTGGAAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
GTGTTTTTGGTTCCAATCTTGAAAAGAATGGAGAGTGTTACAAGAATCAATGCTTGTCTTATTTA
AGGAAAGAACTTTGATTAAAAGAAAATAGGGCAAAGAAATAGTTACCATGCAAAATAAAATCATC
TATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCA
TTACTAGAATCCATGTTTGTCTGATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTAGGAAG
AAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTTTATGG
TGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAATGACAAA
CTTTGATTCTATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCAACACAAAGCATCAATGTCATG
TATCCTAATGAAGGGAATGCATTTTTTTTCCCAATCTTGAAAAGAATTGAGAGTGTTATGAGAAT
TGAAGATTGTCTTATTTCAAGGAAGAAATTTGATTTTAAAGAAAATATGGCAAAGAAAAATTTTC
ATGCAGCAGAAAATCATTAATATCATTTATCCTAATGAGAGAATGTGTTTATAGTGCCTAATCAC
AAAATGAATAAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTA
CAAAAATTTATAGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA
GAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAA
Found at i:1557022 original size:475 final size:477
Alignment explanation
Indices: 1556023--1558103 Score: 2768
Period size: 476 Copynumber: 4.4 Consensus size: 477
1556013 TTACAAAATA
** * * *
1556023 AAAATCATCTGTATCGTTTATCTTAATGAGAAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
1 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* *
1556088 TGAAGATCATTTCTAGAATCCATATTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAAAA
66 TGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTAC--AAAAA
*
1556153 TTTCG-G--AAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAACGAGAAGA
129 TTT-GTGAAAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGA
* * * * *
1556215 CTAAGTTTACGGTGGCTAATCTTGAAAATAATTAGGGATTAGCATGACTATTCATGTTTGTCTTA
193 CTATGTTTATGGTGCCTAATCTTGAAAAGAATTAGGGATTAGTATGACTATTCATGTTTGTCTTA
* * *
1556280 TTTAAATGACAAACTCAGATTCGATCAAAAATGGTGGAAAGAAAAGCTATTCTTGCGACACCAAA
258 TTTAAATGACAAACTCTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAA
* * * *
1556345 GCATCAAAGTCATATATCCTAATGAAGGGAATGAGTTTTCCGTTCCTAATCCTGAAAAGAATTGA
323 GCATCAATGTCATGTATCCTAATGAAGGGAATGAGTTTTTCGTTCCCAATCCTGAAAAGAATTGA
*
1556410 GACTGTTATGAGAATTGAAGATTGTCTTATTTTAGGGATGAACTTTGATTTTAAAGAAAATATGG
388 GACTGTTACGAGAATTGAAGATTGTCTTATTTTAGGGATGAACTTTGATTTTAAAGAAAATATGG
*
1556475 CGAAGAAAAACTTTTCATGCCGAAG
453 CAAAGAAAAACTTTTCATGCCGAAG
* * ** *
1556500 AAAATCATCATTATCATTTATCCTAATGAGAAGAATGTGTTTATAGTGCAAAATCACAGAATGAA
1 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * *
1556565 TGAAGATCATTACTAGAATCCATGTTTGTCTGATTTGAGGCACGAGCTTGGACTTTACAAAAA-T
66 TGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATT
* * * ** * * *
1556629 CGAAGAAAAGAAAACCTTTCTTGCGAAACCAAAGCATCAATATTGTGTATCCTTAGGCGAAGACT
131 TG-TGAAAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACT
* * *
1556694 ATGTTTATGGTGCCTAATCCTGAAAAGAA-TAGGGATTTGTATGACTATTAATGTTTGTCTTATT
195 ATGTTTATGGTGCCTAATCTTGAAAAGAATTAGGGATTAGTATGACTATTCATGTTTGTCTTATT
* * * *
1556758 TAAGA-GATAAACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTTTTACAACACCAAAG
260 TAA-ATGACAAACTCTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAG
* ** * * * *
1556822 CATCAATGTCATGTATCCGAACAAATGTAATGTG-TTTTCGTTCCCAATCCTAAAAAGAATTGAG
324 CATCAATGTCATGTATCCTAATGAAGGGAATGAGTTTTTCGTTCCCAATCCTGAAAAGAATTGAG
* * *
1556886 ACTGTTATGAGAATTGAAGATTGTCTTGTTTTAGGGATGAACTTTGATTTTAAAGGAAATATGGC
389 ACTGTTACGAGAATTGAAGATTGTCTTATTTTAGGGATGAACTTTGATTTTAAAGAAAATATGGC
* *
1556951 AAAGAAAAACTCTTGATGCCGAAG
454 AAAGAAAAACTTTTCATGCCGAAG
*
1556975 AAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCAC-AAAT-AA
1 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * *
1557038 TTAAAGATCATGACTAGAATCCATGTTTTTCTTATTTGAGGAACGAACTTATACTTTGCAAAAAT
66 -TGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAAT
** * *
1557103 TTGTGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAATACT
130 TTGTGAAAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACT
* * * *
1557168 ATGTTGATGGTGCCTAATCATGAAAAGAATTGGGGATTAGTACGACTATTCATGTTTGTCTTATT
195 ATGTTTATGGTGCCTAATCTTGAAAAGAATTAGGGATTAGTATGACTATTCATGTTTGTCTTATT
* * *
1557233 TAAATGACAAACTCTAATTCGATCAAAAATGGTGAAAAGAAAAGCTTTTCTTGCGACACCAAAGC
260 TAAATGACAAACTCTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAGC
* *
1557298 ATCAATGTCATGTAT-CTAATGAAGGGAATGAGTTTTTTGTTCCCAATCCTGAAAAGAATTAAGA
325 ATCAATGTCATGTATCCTAATGAAGGGAATGAGTTTTTCGTTCCCAATCCTGAAAAGAATTGAGA
* * *
1557362 CTGTTACGAGAATTGATGATTGTCTTATTTTAGGGATTAACTTTGATTTTAAAGAAAATATGGGA
390 CTGTTACGAGAATTGAAGATTGTCTTATTTTAGGGATGAACTTTGATTTTAAAGAAAATATGGCA
1557427 AAGAAAAACTTTTCATGTCC-AAG
455 AAGAAAAACTTTTCATG-CCGAAG
* *
1557450 AAAATCTTCAATATCATTTATCCTACTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
1 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * *
1557515 TGAAGATCATGACTAGAATCCATGTTTTTCTTATTTGAGGAACAAACTTAGACTTGACAAAAATT
66 TGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATT
** * *
1557580 TGTGGGAAGAAAGTCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGGCTA
131 TGTGAAAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTA
* *
1557645 TGATTATGGTGCCTTATCTTGAAAAGAATTAGGGATTAGTATGACTATTCATGTTTGTCTTATTT
196 TGTTTATGGTGCCTAATCTTGAAAAGAATTAGGGATTAGTATGACTATTCATGTTTGTCTTATTT
* * * **
1557710 AAATGACAAACT-TGATTCTATCAAAAACGGTGGAAAGAAAATCTTTTCTTGCAACAATAAAGCA
261 AAATGACAAACTCTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAGCA
* * * * * * *
1557774 TCAATATCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAGGAATGGAGAG
326 TCAATGTCATGTATCCTAATGAAGGGAATGAGTTTTTCGTTCCCAATCCTGAAAAGAATTGAGAC
* * * *** * * * *
1557839 TGTTGCAAGAATCGATCCTTGTCTTATTTAAGGAAAGAACTTTGA-TTTAAAGGAAAATAAGGCA
391 TGTTACGAGAATTGAAGATTGTCTTATTTTAGGGATGAACTTTGATTTTAAA-GAAAATATGGCA
*** ** ** *
1557903 AAGAAATGGTTACCATGCAAAAT
455 AAGAAAAACTTTTCATGCCGAAG
** * * *
1557926 AAAATCATCTGTATCATTTATCTTAATGAGGAGAATGTCTTTATAGTGCCTAATCATAAAATGAA
1 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * ** * *
1557991 TAAAGATCATTTCTAGAATCCACATTTGTCTTATTTGAGGAACGAACTTAGATTTTGCAAAAATT
66 TGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATT
* *
1558056 TGTGAGAAA-AAAGCCTTTCATGCGAATCCAAAGCATCAATATCATGTA
131 TGTGA-AAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTA
1558104 CCAGAGGGGG
Statistics
Matches: 1405, Mismatches: 182, Indels: 35
0.87 0.11 0.02
Matches are distributed among these distances:
473 3 0.00
474 148 0.11
475 496 0.35
476 567 0.40
477 191 0.14
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.32
Consensus pattern (477 bp):
AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
TGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGAACGAACTTAGACTTTACAAAAATT
TGTGAAAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTA
TGTTTATGGTGCCTAATCTTGAAAAGAATTAGGGATTAGTATGACTATTCATGTTTGTCTTATTT
AAATGACAAACTCTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAGCA
TCAATGTCATGTATCCTAATGAAGGGAATGAGTTTTTCGTTCCCAATCCTGAAAAGAATTGAGAC
TGTTACGAGAATTGAAGATTGTCTTATTTTAGGGATGAACTTTGATTTTAAAGAAAATATGGCAA
AGAAAAACTTTTCATGCCGAAG
Found at i:1557439 original size:158 final size:157
Alignment explanation
Indices: 1556315--1557908 Score: 592
Period size: 159 Copynumber: 10.1 Consensus size: 157
1556305 CAAAAATGGT
* * *
1556315 GGAAAGAAAAGCTATTCTTGCGACACCAAAGCATCAA-AGTCATATATCCTAATGAAGGGAATGA
1 GGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATA-TCATGTATCCTAATG-AGGGAATGA
** * * * * * *
1556379 GTTTTCCGTTCCTAATCCTGAAAAGAATTGAGACTGTTATGAGAATTGAAGATTGTCTTATTTTA
64 GTTTTTAGTGCCTAATCCTGAAAAGAATTAAGACTGTTACGAGAATTCATGTTTGTCTTATTTTA
1556444 GGGATGAACTTTGATTTTAAAGAAAATATG
129 GGGATGAACTTTGATTTTAAA-AAAATATG
* ** * * * *
1556474 GCG-AAGAAAAACTTTTCATGCCGA-AGAAAATCATCATTATCATTTATCCTAATGAGAAGAATG
1 G-GAAAGAAAAACTTTTCTTG-CGACACCAAAGCATCAATATCATGTATCCTAATGAG-GGAATG
* * ** * * * * * * *
1556537 TGTTTATAGTGCAAAATCACAG-AATGAATGAAGA-TCATTACTAGAATCCATGTTTGTCTGATT
63 AGTTTTTAGTGCCTAATC-CTGAAAAGAATTAAGACT-GTTACGAGAATTCATGTTTGTCTTATT
* * * * * * * *
1556600 TGAGGCACGAGCTTGGACTTTACAAAAAT-CG
126 TTAGGGATGAACTTTGATTTTAAAAAAATATG
* * * **
1556631 AAGAAA-AGAAAACCTTTCTTGCGAAACCAAAGCATCAATATTGTGTATCCT--T-AGGCGAA-G
1 -GGAAAGA-AAAACTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATGAGG-GAATG
* * * * ** *
1556691 ACTATGTTTATGGTGCCTAATCCTGAAAAGAA-TAGGGA-TTTGTATGACTATTAATGTTTGTCT
63 AGT-T-TTTA--GTGCCTAATCCTGAAAAGAATTA-AGACTGT-TACGAGAATTCATGTTTGTCT
* * * ** * *
1556754 TATTTAAGAGATAAACTTTGATTCGATCAAAAAT-GG
122 TATTTTAGGGATGAACTTTGATTTTA-AAAAAATATG
* * * * * * ** * * *
1556790 TGGAAAGAAAAGCTTTTTTTACAACACCAAAGCATCAATGTCATGTATCCGAACAAATGTAATGT
1 -GGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTAA-TGAGGGAATGA
* * * * * * * * * *
1556855 G-TTTTCGTTCCCAATCCTAAAAAGAATTGAGACTGTTATGAGAATTGAAGATTGTCTTGTTTTA
64 GTTTTTAGTGCCTAATCCTGAAAAGAATTAAGACTGTTACGAGAATTCATGTTTGTCTTATTTTA
*
1556919 GGGATGAACTTTGATTTTAAAGGAAATATG
129 GGGATGAACTTTGATTTTAAA-AAAATATG
* * ** ** * *
1556949 GCAAAGAAAAACTCTTGATGCCGA-AGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT-A
1 GGAAAGAAAAACTTTTCTTG-CGACACCAAAGCATCAATATCATGTATCCTAATGAGG-GAATGA
* * * * *
1557012 TGTTTATAGTGCCTAAT-C--ACAAATAATTAAAGATCATG--ACTAGAATCCATGTTTTTCTTA
64 -GTTTTTAGTGCCTAATCCTGA-AAAGAATT-AAGA-C-TGTTACGAGAATTCATGTTTGTCTTA
* * * * ** *
1557072 TTTGAGGAACGAACTTAT-ACTTTGCAAAAATTTG
124 TTTTAGGGATGAACTT-TGATTTTAAAAAAATATG
* * * * *
1557106 TGGGAAG-AAAGCATTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA--GAAT-AC
1 -GGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATGAGGGAATGAG
* * ** * **
1557167 TATGTTGATGGTGCCTAATCATGAAAAGAATTGGGGATTAG-TACGACTATTCATGTTTGTCTTA
65 T-T-TT--TAGTGCCTAATCCTGAAAAGAATT-AAGACT-GTTACGAGAATTCATGTTTGTCTTA
* ** ** * * ** **
1557231 TTTAAATGACAAACTCTAATTCGATCAAAA-ATG
124 TTTTAGGGATGAACTTTGATTTTAAAAAAATATG
* *
1557264 GTGAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTAT-CTAATGAAGGGAATG
1 G-G-AAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATG-AGGGAATG
* * * * *
1557328 AGTTTTTTGTTCCCAATCCTGAAAAGAATTAAGACTGTTACGAGAATTGATGATTGTCTTATTTT
63 AGTTTTTAGTGCCTAATCCTGAAAAGAATTAAGACTGTTACGAGAATTCATGTTTGTCTTATTTT
*
1557393 AGGGATTAACTTTGATTTTAAAGAAAATATG
128 AGGGATGAACTTTGATTTTAAA-AAAATATG
* * ** * * * * *
1557424 GGAAAGAAAAACTTTTCATGTCCA-AGAAAATCTTCAATATCATTTATCCTACTGAGGAGAATGT
1 GGAAAGAAAAACTTTTCTTG-CGACACCAAAGCATCAATATCATGTATCCTAATGAGG-GAATGA
* * * * *
1557488 GTTTATAGTGCCTAATCAC--AAAATGAATGAAGATCATG--ACTAGAATCCATGTTTTTCTTAT
64 GTTTTTAGTGCCTAATC-CTGAAAA-GAATTAAGA-C-TGTTACGAGAATTCATGTTTGTCTTAT
* * ** * * * * *
1557549 TTGAGGAACAAACTTAGACTTGACAAAAATTTG
125 TTTAGGGATGAACTTTGATTTTAAAAAAATATG
* ** * *
1557582 TGGGAAGAAAGTC-TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGGCTAT
1 -GGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATGAG--GG-AAT
* * * * * * * **
1557646 GA--TTATGGTGCCTTATCTTGAAAAGAATTAGGGATTAG-TATGACTATTCATGTTTGTCTTAT
62 GAGTTTTTAGTGCCTAATCCTGAAAAGAATTA-AGACT-GTTACGAGAATTCATGTTTGTCTTAT
* ** ** * * **
1557708 TTAAATGACAAAC-TTGATTCTATCAAAAA-CGG
125 TTTAGGGATGAACTTTGATTTTA-AAAAAATATG
* * ** *
1557740 TGGAAAGAAAATCTTTTCTTGCAACAATAAAGCATCAATATCATGTATCCTAATGAAGGGAATGT
1 -GGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATG-AGGGAATGA
* * * * * ** * * * ** *
1557805 GTTTTTGGTTCCCAATCTTGAAAGGAATGGAGAGTGTTGCAAGAA-TCGATCCTTGTCTTATTTA
64 GTTTTTAGTGCCTAATCCTGAAAAGAATTAAGACTGTTACGAGAATTC-ATGTTTGTCTTATTTT
* * *
1557869 AGGAAAGAACTTTGA-TTTAAAGGAAAATAAG
128 AGGGATGAACTTTGATTTTAAA--AAAATATG
*
1557900 GCAAAGAAA
1 GGAAAGAAA
1557909 TGGTTACCAT
Statistics
Matches: 1030, Mismatches: 317, Indels: 176
0.68 0.21 0.12
Matches are distributed among these distances:
153 1 0.00
154 8 0.01
155 7 0.01
156 8 0.01
157 84 0.08
158 412 0.40
159 428 0.42
160 65 0.06
161 5 0.00
162 7 0.01
163 5 0.00
ACGTcount: A:0.36, C:0.13, G:0.18, T:0.32
Consensus pattern (157 bp):
GGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATGAGGGAATGAGT
TTTTAGTGCCTAATCCTGAAAAGAATTAAGACTGTTACGAGAATTCATGTTTGTCTTATTTTAGG
GATGAACTTTGATTTTAAAAAAATATG
Found at i:1560228 original size:159 final size:158
Alignment explanation
Indices: 1559535--1560684 Score: 446
Period size: 159 Copynumber: 7.3 Consensus size: 158
1559525 TACCGAGAAG
* * * * * * * *
1559535 AAAGCCTTTCTTGCAAAACTAAAGCATCAATATCGTGCATCCTTATGAGAA-GACTATGTTTATG
1 AAAGCTTTTCTTACAAAACCAAAGCATCAATGTCATGTATCCTAATGA-AAGGAATATGTTTATG
**
1559599 GTGCCTAATCCCGAAAAGAATGGGGATTTGTATGACTAAT-AATGTTTGTCTTATTTAAGAGATA
65 GTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACT-ATCAATGTTTGTCTTATTTAAGAGATA
* *
1559663 AACTTTGATTCGATCAAAAACGATGGAAAGA
129 AACTTTAATTTGAT-AAAAACGATGGAAAGA
* *** * * * * * *
1559694 AAAGGTTTTCTTACGGCACCAAAGCATCAATGTCTTGTAACCTAATGAAGGGATTGTGTTTTTGG
1 AAAGCTTTTCTTACAAAACCAAAGCATCAATGTCATGTATCCTAATGAAAGGAATATGTTTATGG
* * ** * * * ** * ** * * *
1559759 TTCCCAATCTTTTAAATAATGGTGA-CTGTTATGAGAATCGATACTTATCTTATTTACGAAATAA
66 TGCCTAATCTTGAAAAGAATGGGGATTTG-TATGACTATCAATGTTTGTCTTATTTAAGAGATAA
* * ** *
1559823 ACTTTGATTTTA-AATAAAATAGGGCAAAGA
130 ACTTTAATTTGATAA-AAACGATGG-AAAGA
* * ** * * * *** * *
1559853 AAAGATTTTCATACAAAAGAAAATCATCAATATCGTGTATCCTAA-GGGGGAGAATGTGTTTATA
1 AAAGCTTTTCTTACAAAACCAAAGCATCAATGTCATGTATCCTAATGAAAG-GAATATGTTTATG
** ** * * * *
1559917 GTGCCTAATC-ACAAAATGAATGAAGATCAT-TACTAGA--ATCCATGTTTGTCTTAGTTGAG-G
65 GTGCCTAATCTTGAAAA-GAATGGGGAT-TTGTA-T-GACTATCAATGTTTGTCTTATTTAAGAG
* * * * *
1559977 CACAAAC-TTAGACTTT-ACAAAAATTGGTGGTAA-A
126 -ATAAACTTTA-A-TTTGATAAAAA-CGATGGAAAGA
* * ** * * * * *
1560011 AATGCCTTTCTTATGAAACCAAACCATCATTGTCATGTATCTTAAAGAGAA-GACTATGTTTATG
1 AAAGCTTTTCTTACAAAACCAAAGCATCAATGTCATGTATCCTAATGA-AAGGAATATGTTTATG
* * *
1560075 GTGCCTAATCTTGAAAAGAAAGGGGATTTGTATGACTATTAATGTTTTTCTTATTTAAGAGATAA
65 GTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATCAATGTTTGTCTTATTTAAGAGATAA
*
1560140 ACTTTAATTTGATAGAAAACGACGGAAAGA
130 ACTTTAATTTGATA-AAAACGATGGAAAGA
* *
1560170 AAAGCTTTTCTTACAACACCAAAGCATCAATGTCATGTATCCTAATGAAAGGAATATGTTTTTGG
1 AAAGCTTTTCTTACAAAACCAAAGCATCAATGTCATGTATCCTAATGAAAGGAATATGTTTATGG
* * ** * * ** * ** * *** * *
1560235 TTCCCAATCTTTTAAAGAATGGTGACTACTACGAGAATCGATGCAAGCCTT-TTTGAAG-G-T-G
66 TGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATCAATGTTTGTCTTATTT-AAGAGATAA
* *
1560296 ATTTTAA-TT-A-AAATA-G--GGCAAAGA
130 ACTTTAATTTGATAAAAACGATGG-AAAGA
* * * * ** * * * * * * *
1560320 AAAGATTTCCATGCAAAAGAAAATCATCAATATCATATATCCTACTG-AGGAGAATGTGTTTATA
1 AAAGCTTTTCTTACAAAACCAAAGCATCAATGTCATGTATCCTAATGAAAG-GAATATGTTTATG
** **** * * *
1560384 GTGCCTAATC-ACAAAATGAAAAAAGA--T-CATGACTAGAATCAATGTTTGTCTCATTTGAG-G
65 GTGCCTAATCTTGAAAA-GAATGGGGATTTGTATGACT---ATCAATGTTTGTCTTATTTAAGAG
* * **
1560444 CATGAAC-TTAGAGTTT-A-CAAAA-G-TTAAAAGGA
126 -ATAAACTTTA-A-TTTGATAAAAACGATGGAAA-GA
** * * * * *
1560476 AAAAATGTTTCTTGCAAAACCAAAGCATCAATATGATGTATCCTAAT-AATAAGATTATGTTTAT
1 AAAGCT-TTTCTTACAAAACCAAAGCATCAATGTCATGTATCCTAATGAA-AGGAATATGTTTAT
* * * *
1560540 GGTGCCTAATCCTGAAAAGAATGGGGATTTGTATTACTATTAATGTTTGTCTTATTTAAGAGACA
64 GGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATCAATGTTTGTCTTATTTAAGAGATA
* * * *
1560605 AACTTTGATTCGATCAAAAATGGTGGAAAGA
129 AACTTTAATTTGAT-AAAAACGATGGAAAGA
* * * * *
1560636 AAAGCTTTTCTTGCAATACCAAAGCATCAGTGTCAAGTATTCTAATGAA
1 AAAGCTTTTCTTACAAAACCAAAGCATCAATGTCATGTATCCTAATGAA
1560685 GAGAAGGTGT
Statistics
Matches: 703, Mismatches: 229, Indels: 117
0.67 0.22 0.11
Matches are distributed among these distances:
147 3 0.00
149 7 0.01
150 76 0.11
151 4 0.01
152 7 0.01
153 3 0.00
154 1 0.00
155 12 0.02
156 17 0.02
157 91 0.13
158 124 0.18
159 329 0.47
160 22 0.03
161 7 0.01
ACGTcount: A:0.37, C:0.13, G:0.18, T:0.32
Consensus pattern (158 bp):
AAAGCTTTTCTTACAAAACCAAAGCATCAATGTCATGTATCCTAATGAAAGGAATATGTTTATGG
TGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATCAATGTTTGTCTTATTTAAGAGATAAA
CTTTAATTTGATAAAAACGATGGAAAGA
Found at i:1561543 original size:474 final size:472
Alignment explanation
Indices: 1559329--1562457 Score: 3419
Period size: 474 Copynumber: 6.6 Consensus size: 472
1559319 TCAATGCTCA
* * * ** *
1559329 TCTTATTTAAGGAAAGAACTTTG-TTTTAAAGGAAAATGGGGCAAAGAAAAGGCTACCATGCAAA
1 TCTTATTTAAGGATA-AACTTTGATTTT-AAGTAAAATAGGGCAAAGAAAAGATTTCCATGC-AA
* * * * * *
1559393 ATAAAATCATTTAGTATCATTTATCCTAATGAAGAGAATGTGTTTACAGTGCCTAATCACAAAAT
63 AGAAAATCA-TCAATATCATTTATCCTAAGGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * *
1559458 GAATGAAGATCCTTACTAGAATCCATGTTTGTTTGATTTGAGGCACGAACTTAGATTTTACAAAA
127 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
*** * * * *
1559523 ATTACCGAGAAGAAA-GCCTTTCTTGCAAAACTAAAGCATCAATATCGTGCATCCTTATGAGAAG
192 ATTGGTG-GAA-AAATGCCTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTAAAGAGAAG
** *
1559587 ACTATGTTTATGGTGCCTAATCCCGAAAAGAATGGGGATTTGTATGACTAATAATGTTTGTCTTA
255 ACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTA
* * * *
1559652 TTTAAGAGATAAACTTTGATTCGATCAAAAACGATGGAAAGAAAAGGTTTTCTTACGGCACCAAA
320 TTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAA
* * * * *
1559717 GCATCAATGTCTTGTAACCTAATGAAGGGATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGT
385 GCATCAATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCCAATC-TTTAAAGAATGGT
* * *
1559782 GACTGTTATGAGAATCGATACTTA
449 GACTATTATGAGAATCGATGCTTG
* * * * *
1559806 TCTTATTTACGAAATAAACTTTGATTTTAAATAAAATAGGGCAAAGAAAAGATTTTCATACAAAA
1 TCTTATTTAAG-GATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGC-AAA
* * *
1559871 GAAAATCATCAATATCGTGTATCCTAAGGGGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
64 GAAAATCATCAATATCATTTATCCTAAGGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * *
1559936 ATGAAGATCATTACTAGAATCCATGTTTGTCTTAGTTGAGGCACAAACTTAGACTTTACAAAAAT
129 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAAT
*** * * * * *
1560001 TGGTGGTAAAAATGCCTTTCTTATGAAACCAAACCATCATTGTCATGTATCTTAAAGAGAAGACT
194 TGGTGG-AAAAATGCCTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTAAAGAGAAGACT
* *
1560066 ATGTTTATGGTGCCTAATCTTGAAAAGAAAGGGGATTTGTATGACTATTAATGTTTTTCTTATTT
258 ATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTT
* * * ** *
1560131 AAGAGATAAACTTTAATTTGAT-AGAAAACGACGGAAAGAAAAGCTTTTCTTACAACACCAAAGC
323 AAGAGACAAACTTTGATTCGATCA-AAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGC
*
1560195 ATCAATGTCATGTATCCTAATGAAAGGAATATGTTTTTGGTTCCCAATCTTTTAAAGAATGGTGA
387 ATCAATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCCAATC-TTTAAAGAATGGTGA
* * **
1560260 CTACTACGAGAATCGATGCAAG
451 CTATTATGAGAATCGATGCTTG
* *
1560282 CCTT-TTTGAAGG--------TGATTTTAATTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAA
1 TCTTATTT-AAGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGC-AAA
* **
1560338 GAAAATCATCAATATCATATATCCTACTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
64 GAAAATCATCAATATCATTTATCCTAAGGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
** * * * * *
1560403 AAAAAGATCATGACTAGAATCAATGTTTGTCTCATTTGAGGCATGAACTTAGAGTTTACAAAAGT
129 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAAT
*** *
1560468 TAAAAGGAAAAAATG--TTTCTTGCAAAACCAAAGCATCAATAT-GATGTATCCTAATA-ATAAG
194 T-GGTGG-AAAAATGCCTTTCTTGCAAAACCAAAGCATCAATATCG-TGTATCCTAA-AGAGAAG
* * *
1560529 ATTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTTGTATTACTATTAATGTTTGTCTTA
255 ACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTA
* * * *
1560594 TTTAAGAGACAAACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAATACCAAA
320 TTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAA
* * * * **
1560659 GCATCAGTGTCAAGTATTCTAATGAAGAGAAGGTGTTTTTGGTTCCCAATCTTTTAAAG-A----
385 GCATCAATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCCAATC-TTTAAAGAATGGT
* * * *
1560719 -ACGATTATGAGAATCTATTCTTA
449 GACTATTATGAGAATCGATGCTTG
* * * *
1560742 TCTTATTTAAGAGATTAACTTTGATTTTAAGAAAAATAGGGCAAGGAAAAGATTTCCATGGAGAA
1 TCTTATTTAAG-GATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCA-AA
* * * *
1560807 GATAATCATCAATATCATTTATCCTAA-GACGGAGAATATGTTTATAGAGCCTAATCACATAATG
64 GAAAATCATCAATATCATTTATCCTAAGGA-GGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * *
1560871 AATGAAGATCATTATTGGAATCCATGTTTGTCTCATTTGAGGCACGGAAC-TAGACTTTATAGAA
128 AATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCAC-GAACTTAGACTTTACAAAA
* * * * * *** *
1560935 ATTGGTGGGAAAAAGGCCTTTCTTGCTAAACCAAGGCACCAATATCGTGTTTCCTTTTGAGAGGA
192 ATTGGT-GGAAAAATGCCTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTAAAGAGAAGA
* ** * * * * *
1561000 CTACGTCAAT-GTGCCTAAT-TCTGAAAAGAATGGGGAGTAGGATGACTATTATTGGTTGTCTTA
256 CTATGTTTATGGTGCCTAATCT-TGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTA
* * * * *
1561063 TTTAAGAGACAAACTTTGATTCGATAAAAAATGGTAGAAAGATAAGCTTTTCTTGCGACACCAAA
320 TTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAA
* * *
1561128 GTATCAATGTCATGTAAT-CTAATGAAGGGAATATGTTCTTGGTTCCCAATCTATTGAAGAATGG
385 GCATCAATGTCATGT-ATCCTAATGAAGGGAATATGTTTTTGGTTCCCAATCT-TTAAAGAATGG
*
1561192 TGACTATTATGAGAATTGATGCTTG
448 TGACTATTATGAGAATCGATGCTTG
* *
1561217 TCTTATTTAAAGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAGATTTCCTTGCAAAT
1 TCTTATTT-AAGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAA-
* *
1561282 GAAAGTCATCAATATCATTTATCCTAAGGAGGAGAATGTGTTTATAGTGCTTAA-CACAAAATGA
64 GAAAATCATCAATATCATTTATCCTAAGGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * *
1561346 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTCGAGGTAGGAACTTAGACTTTACAAAAAT
129 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAAT
* ** * *
1561411 TGGTGGTAAAAATGCCTTTCCTATAAAACAAAACCATCAATATCGTGTATCCTAAAGAGAAGACT
194 TGGTGG-AAAAATGCCTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTAAAGAGAAGACT
*
1561476 ATGTTTATGGTGCCTAATCTTGAAAA-AATGGGGATTTGTATGACTATTAATGTTTGTCTTTTTT
258 ATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTT
* * * **
1561540 AAGAGACAAACTATGATTCGATCAAAAATGGTGGAATGAAAAGCTTTTCTTGTGACACCAAAGCA
323 AAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCA
* * * * * * *
1561605 TGAATGTCATGTATCCTAATGAAGGGATTGTGTTTTTGGCTCCCAATCTTGTAAAGAGTGGAGAA
388 TCAATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCCAATCTT-TAAAGAATGGTGAC
* *
1561670 TGTTATGAGAATCGATTCTTG
452 TATTATGAGAATCGATGCTTG
* *
1561691 TCTTATTTAAGGGATAATCTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAA-
1 TCTTATTTAA-GGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAG
** * *
1561755 AAAATGGTCAATATCATTTATCCT-AGTGAGGAGAATATGTTTATAGTGCCTAATCACATAATGA
65 AAAATCATCAATATCATTTATCCTAAG-GAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * * * * * * * * *
1561819 ATAAAGATCACTATTGGAACCCATGTTTGTGTCATTTGAGGCACAAACTTATACTTTATAGAAAT
129 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAAT
* * * * *
1561884 TGGTGCGAAAAAAGCCTTTCTTGCGAAACCAATGCTTTAATATCGTGTATCCTAATA-AGAAGAC
194 TGGTG-GAAAAATGCCTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTAA-AGAGAAGAC
* * * * *
1561948 TATGTTTATGGTGCTTAATCTTGAAAAAAATGGGGATTAGTATGACTATTCATGTTTGTCTTATA
257 TATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATT
* * * * * * * *
1562013 TAAGACACAAACTTTGATTCTATCAAAAACAGTGGAAGGACAAGCTTTTCTTATGACACCAAGGT
322 TAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGC
* * * * * * *
1562078 ATCAATGTCAAGTATCCTAATGAAGGAAATATGTTTTTTGTTCTCAAACTTCAAAAGAATGGAGA
387 ATCAATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCCAATCTT-TAAAGAATGGTGA
* ** *
1562143 CTGTTATGAGAATTAATGATTG
451 CTATTATGAGAATCGATGCTTG
* * * * * * *
1562165 TCTTACTTTAGGGA-AGTACTTTGATTTCAAGGAAAATAGGACAAAGAAAAGATTTTCATGGGAA
1 TCTTA-TTTAAGGATA-AACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCAT-GCAA
* * * * * *
1562229 AGAAAATCATCAAAATCATTTATCCTAATGAGGAGAATGCGTTTATAGCGCCTAGTCACATAATG
63 AGAAAATCATCAATATCATTTATCCTAAGGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
1562294 AATGAAGATCATAACTGGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGGCTTTACAGAAT
128 AATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * * * * * **
1562359 TTGGCGTGAAAAAAAT-CTTTTCTTGCGACACCAAAGTATCAATGTCATGTATCCTAATGAGGGG
193 TT-G-GTG-GAAAAATGCCTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTAAAGAGAAG
* * * * * *
1562423 AATGTGTTTTTTGTTCCCAATCTTGAAAAGAATGG
255 ACTATGTTTATGGTGCCTAATCTTGAAAAGAATGG
1562458 AGACTGTTAC
Statistics
Matches: 2226, Mismatches: 366, Indels: 120
0.82 0.13 0.04
Matches are distributed among these distances:
460 21 0.01
461 4 0.00
465 1 0.00
466 201 0.09
467 159 0.07
468 19 0.01
469 297 0.13
470 48 0.02
471 3 0.00
472 45 0.02
473 149 0.07
474 538 0.24
475 147 0.07
476 462 0.21
477 118 0.05
478 14 0.01
ACGTcount: A:0.36, C:0.13, G:0.19, T:0.32
Consensus pattern (472 bp):
TCTTATTTAAGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAGA
AAATCATCAATATCATTTATCCTAAGGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTG
GTGGAAAAATGCCTTTCTTGCAAAACCAAAGCATCAATATCGTGTATCCTAAAGAGAAGACTATG
TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAG
AGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCA
ATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCCAATCTTTAAAGAATGGTGACTATT
ATGAGAATCGATGCTTG
Found at i:1562508 original size:318 final size:316
Alignment explanation
Indices: 1562057--1562678 Score: 913
Period size: 318 Copynumber: 2.0 Consensus size: 316
1562047 GAAGGACAAG
* * *
1562057 CTTTTCTTATGACACCAAGGTATCAATGTCAAGTATCCTAATGAAGGAAATATGTTTTTTGTTCT
1 CTTTTCTTACGACACCAAAGTATCAATGTCAAGTATCCTAATGAAGGAAATATGTTTTTTGTTCC
* *
1562122 CAAACTTCAAAAGAATGGAGACTGTTATGAGAATTAATGATTGTCTTACTTTAGGGAAGTACTTT
66 CAAACTTCAAAAGAATGGAGACTGTTACGAGAATTAATGATTGTCTTACTTTAGGGAAGAACTTT
**
1562187 GATTTCAAGGAAAAT-AGGACAAAGAAAAGATTTTCATGGGAAAGAAAATCATCAAAATCATTTA
131 GATTTCAAGGAAAATAAGG-CAAAG--AAGATTTTCATGCAAAAGAAAATCATCAAAATCATTTA
* * * * * * *
1562251 TCCTAATGAGGAGAATGCGTTTATAGCGCCTAGTCACATAATGAATGAAGATCATAACTGGAATC
193 GCCTAATGAGGAGAACGCGTTTATAGCACCTAATCACATAATAAATGAAGATCATAACTGAAACC
*
1562316 CATGTTTGTCTCATTTGAGGCACGAACTTAGGCTTTACAGAATTTGGCGTGAAAAAAAT
258 CATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAATTTGGCGTGAAAAAAAT
* * * * *
1562375 CTTTTCTTGCGACACCAAAGTATCAATGTCATGTATCCTAATGAGGGGAATGTGTTTTTTGTTCC
1 CTTTTCTTACGACACCAAAGTATCAATGTCAAGTATCCTAATGAAGGAAATATGTTTTTTGTTCC
* * * *
1562440 CAATCTTGAAAAGAATGGAGACTGTTACGAGAATTAATTATTGTCTTACTTTATGGAAGAACTTT
66 CAAACTTCAAAAGAATGGAGACTGTTACGAGAATTAATGATTGTCTTACTTTAGGGAAGAACTTT
* * *
1562505 GATTTCGAGGAAAATAAGGCAAAGAAGATTTTCATGCAAAAGAAAATCTTCAATATCATTTAGCC
131 GATTTCAAGGAAAATAAGGCAAAGAAGATTTTCATGCAAAAGAAAATCATCAAAATCATTTAGCC
* ** * *
1562570 TAATGAGGAGAACGTGTTTATAGCATTTAATCACATAATAAATGAAGATCATTACTGAAACCCTT
196 TAATGAGGAGAACGCGTTTATAGCACCTAATCACATAATAAATGAAGATCATAACTGAAACCCAT
*
1562635 GTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAGAATTTGG
261 GTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAATTTGG
1562679 TAAGGAAAAA
Statistics
Matches: 270, Mismatches: 33, Indels: 4
0.88 0.11 0.01
Matches are distributed among these distances:
316 132 0.49
318 135 0.50
319 3 0.01
ACGTcount: A:0.35, C:0.14, G:0.19, T:0.32
Consensus pattern (316 bp):
CTTTTCTTACGACACCAAAGTATCAATGTCAAGTATCCTAATGAAGGAAATATGTTTTTTGTTCC
CAAACTTCAAAAGAATGGAGACTGTTACGAGAATTAATGATTGTCTTACTTTAGGGAAGAACTTT
GATTTCAAGGAAAATAAGGCAAAGAAGATTTTCATGCAAAAGAAAATCATCAAAATCATTTAGCC
TAATGAGGAGAACGCGTTTATAGCACCTAATCACATAATAAATGAAGATCATAACTGAAACCCAT
GTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAATTTGGCGTGAAAAAAAT
Found at i:1563430 original size:792 final size:790
Alignment explanation
Indices: 1561723--1563304 Score: 1716
Period size: 792 Copynumber: 2.0 Consensus size: 790
1561713 GATTTTAAGA
* * * * ** * *
1561723 AAAATAGGGCAAAGAAAAGATTTCCATGCAAAA-AAATG-GTCAATATCATTTATCCTAGTGAGG
1 AAAATAAGGC-AA-AAAAGATTTTCATGCAAAACAAAAGCATCAATATCACGTAGCCTAATGAGG
** * * * * ** * *
1561786 AGAATATGTTTATAG--TGCCTAATCACATAATGAATAAAGATCACTATTGGAACCCATGTTTGT
64 AGAACGTGTTTATAGCAT-TC-AATCACATAATAAATGAAGATCATTACAGAAACCCTTGTTTGT
* * **
1561849 GTCATTTGAGGCACAAACTTATACTTTATAGAAATTGGTGCGAAAAAAGCCTTTCTTGCGAAACC
127 CTCATTTGAGGCACAAACTTAGACTTTATAGAAATTGGTAAGAAAAAAGCCTTTCTTGCGAAACC
* * * * * *
1561914 AATGCTTTAATATCGTGTATCCTAATAAGAAGACTATGTTTATGGTGCTTAATCTTGAAAAAAAT
192 AAGGCATCAATATCGTGTATCCTAATAAGAAAACTATGTTTATGGTGCCTAATCGTGAAAAAAAT
*
1561979 GGGGATTAGTATGACTATTCATGTTTGTCTTATATAAGACACAAACTTTGATTCTATCAAAAACA
257 GGGGATTAGTATGACTATTCATGTTTGTCTTATATAAGACACAAACTTTGATTCGATCAAAAACA
* * * * * *
1562044 GTGGAAGGACAAGCTTTTCTTATGACACCAAGGTATCAATGTCAAGTATCCTAATGAAGGAAATA
322 GTGGAAAGAAAAGATTTTCTTATGACACCAAAGCATCAATGTCAAGTACCCTAATGAAGGAAATA
* * * * * *
1562109 TGTTTTTTGTTCTCAAACTTCAAAAGAATGGAGACTGTTATGAGAATTAATGATTGTCTTACTTT
387 TGTTTTTGGTTCACAAACTTCAAAACAATGGAGACTCTTACGAGAATCAATGATTGTCTTACTTT
* * *
1562174 AGGGAAGTACTTTGATTTCAAGGAAAATAGGACAAAGAAAAGATTTTCATGGGAAAGAAAATCAT
452 AGGGAAGAACTTTGATTTCAAGGAAAATAGGACAAAGAAAAGATTTCCATGGAAAAGAAAATCAT
* * * * *
1562239 CAAAATCATTTATCCTAATGAGGAGAATGCGTTTATAGCGCCTAGTCACATAATGAATGAAGATC
517 CAAAATCATTCATCATAATGAGGAGAATGCATTTATAGCGCCTAATCACAAAATGAATGAAGATC
* * * * * *
1562304 ATAACTGGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGGCTTTACAGAATTTGGCGTGAA
582 ATAACTAGAATCCATGTTTCTCTCATCTGAGGCACGAACTTAGACTTTACAGAAATTGGAGT--A
* * * * * ** * *
1562369 AAAAATCTTTTCTTGCGACACCAAAGTATCAATGTCATGTATCCTAATGAGGGGAATGTGTTTTT
645 AAAAATCCTTTCTTACAAAACCAAAGTATCAATATCATGTATCCTAATGAGAAGAATATGTTTAT
* * * * * **
1562434 TGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATTAATTATTGTCTTACTTTATGGAAG
710 GGTGCCCAACCCTGAAAAGAATGGAGACTGTTACGACAATTAATTATTGTCTTACTTTAAAGAAG
* *
1562499 AACTTTGATTTCGAGG
775 AACTTCGATTTCGAGC
* * * * **
1562515 AAAATAAGGCAAAGAAGATTTTCATGCAAAAGAAAATCTTCAATATCATTTAGCCTAATGAGGAG
1 AAAATAAGGCAAAAAAGATTTTCATGCAAAACAAAAGCATCAATATCACGTAGCCTAATGAGGAG
* *
1562580 AACGTGTTTATAGCATTTAATCACATAATAAATGAAGATCATTACTGAAACCCTTGTTTGTCTCA
66 AACGTGTTTATAGCATTCAATCACATAATAAATGAAGATCATTACAGAAACCCTTGTTTGTCTCA
* * * * *
1562645 TTTGAGGCACGAACTTAGACTTTATAGAATTTGGTAAGGAAAAATCCTTTCTTGTGAAACCAAGG
131 TTTGAGGCACAAACTTAGACTTTATAGAAATTGGTAAGAAAAAAGCCTTTCTTGCGAAACCAAGG
** *
1562710 CATCAATATCGTGTATCCTTGTGAGAAAACTATGTTTATGGTGCCTAATCGT-AAAAAGAATGGG
196 CATCAATATCGTGTATCCTAATAAGAAAACTATGTTTATGGTGCCTAATCGTGAAAAA-AATGGG
* * **
1562774 GATTAGTATGACTATT-ATTGTTTGTCTTATTTAAGAGACAAACTTTGATTCGATCAAAAATGGT
260 GATTAGTATGACTATTCA-TGTTTGTCTTATATAAGACACAAACTTTGATTCGATCAAAAACAGT
* * *
1562838 GGAAAGAAAAGATTTT-TT-TGCAACACCAAAGCATCAATGTCAGGTACCCTAATGATGGGAATA
324 GGAAAGAAAAGATTTTCTTATG--ACACCAAAGCATCAATGTCAAGTACCCTAATGAAGGAAATA
* * * * * *
1562901 TGTTTTTGGTTCACAATCGTT-TAAACTATGGTA-ACTCTTGCGAGAATCGATGCTTGTCTTA-T
387 TGTTTTTGGTTCACAAAC-TTCAAAACAATGG-AGACTCTTACGAGAATCAATGATTGTCTTACT
* ** *
1562963 TTAAGGGATA-AACTTTGATTTTAATTAAAATAGGGCAAAGAAAA-ATTTCCATGGAAAAGAAAA
450 TT-AGGGA-AGAACTTTGATTTCAAGGAAAATAGGACAAAGAAAAGATTTCCATGGAAAAGAAAA
* * *
1563026 TCATCAATATCATTCATCAT-ATGGAGGAGAATGTATTTATAGTGCCTAATCACAAAATGAATGA
513 TCATCAAAATCATTCATCATAAT-GAGGAGAATGCATTTATAGCGCCTAATCACAAAATGAATGA
*
1563090 AGATCATTACTAGAATCCATGTTTCTCTCATCTGAGGCACGAACTTAGACTTTACCA-AAATTGG
577 AGATCATAACTAGAATCCATGTTTCTCTCATCTGAGGCACGAACTTAGACTTTA-CAGAAATTGG
* * * * *
1563154 AAGT-AAAAATGCCTTTCTTACAAAACTAAACG-ATCAGTAT-ATGTATTCTGATGAGAAGACTA
641 -AGTAAAAAAT-CCTTTCTTACAAAACCAAA-GTATCAATATCATGTATCCTAATGAGAAGAATA
* * * * *
1563216 TGTTTATGGTGCCTAACCCTGAAAA-AATGGGGA-TTTGTATGACTATTAATGT-TTGTCTTA-T
703 TGTTTATGGTGCCCAACCCTGAAAAGAATGGAGACTGT-TACGACAATTAAT-TATTGTCTTACT
* *
1563277 TTAAAGATGAACTTCGA-TTCGATC
766 TTAAAGAAGAACTTCGATTTCGAGC
1563301 AAAA
1 AAAA
1563305 ACGATGGATA
Statistics
Matches: 657, Mismatches: 114, Indels: 44
0.81 0.14 0.05
Matches are distributed among these distances:
786 9 0.01
787 16 0.02
788 25 0.04
789 42 0.06
790 41 0.06
791 142 0.22
792 377 0.57
793 4 0.01
794 1 0.00
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.32
Consensus pattern (790 bp):
AAAATAAGGCAAAAAAGATTTTCATGCAAAACAAAAGCATCAATATCACGTAGCCTAATGAGGAG
AACGTGTTTATAGCATTCAATCACATAATAAATGAAGATCATTACAGAAACCCTTGTTTGTCTCA
TTTGAGGCACAAACTTAGACTTTATAGAAATTGGTAAGAAAAAAGCCTTTCTTGCGAAACCAAGG
CATCAATATCGTGTATCCTAATAAGAAAACTATGTTTATGGTGCCTAATCGTGAAAAAAATGGGG
ATTAGTATGACTATTCATGTTTGTCTTATATAAGACACAAACTTTGATTCGATCAAAAACAGTGG
AAAGAAAAGATTTTCTTATGACACCAAAGCATCAATGTCAAGTACCCTAATGAAGGAAATATGTT
TTTGGTTCACAAACTTCAAAACAATGGAGACTCTTACGAGAATCAATGATTGTCTTACTTTAGGG
AAGAACTTTGATTTCAAGGAAAATAGGACAAAGAAAAGATTTCCATGGAAAAGAAAATCATCAAA
ATCATTCATCATAATGAGGAGAATGCATTTATAGCGCCTAATCACAAAATGAATGAAGATCATAA
CTAGAATCCATGTTTCTCTCATCTGAGGCACGAACTTAGACTTTACAGAAATTGGAGTAAAAAAT
CCTTTCTTACAAAACCAAAGTATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGGTGCC
CAACCCTGAAAAGAATGGAGACTGTTACGACAATTAATTATTGTCTTACTTTAAAGAAGAACTTC
GATTTCGAGC
Found at i:1563998 original size:475 final size:474
Alignment explanation
Indices: 1562366--1566045 Score: 3989
Period size: 475 Copynumber: 7.8 Consensus size: 474
1562356 AATTTGGCGT
* * *
1562366 GAAA-AAAATCTTTTCTTGCGACACCAAAGTATCAATGTCATGTATCCTAATGAGGGGAATGTGT
1 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
* ** ** * *
1562430 TTTTTGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATTAATTATTGTCTTACTTT-AT
66 TTTTGGTT-CCAATCTTTTAAAGAATGGAGACTGTTACGAGAATCGATTCTTGTCTTA-TTTAAG
** * * * *
1562494 GGA-AGAACTTTGATTTCGAGGAAAATAAGGCAAAG--AAGATTTTCATGCAAAAGAAAATCTTC
129 GGATA-AACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATC
* * **** *
1562556 AATATCATTTAGCCTAATGAGGAGAACGTGTTTATAGCATTTAATCACATAATAAATGAAGATCA
193 AATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATGAAGATCA
* * * * *
1562621 TTACT-GAAACCCTTGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAGAATTTGGTAAGGA
258 TTACTAGAAA-CCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAAATTGGTGAGAA
* ** *
1562685 AAAATCCTTTCTTGTGAAACCAAGGCATCAATATCGTGTATCCTTGTGAGAAAACTATGTTTATG
322 AAAATCCTTTCTTGCGAAACCAAGGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATG
* * *
1562750 GTGCCTAATCGTAAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAGAGACAA
387 GTG-CTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGAGACAA
* *
1562815 ACTTTGATTCGATCAAAAATGGTG
451 ACTTTGATTCGATCAAAAACGATG
* * * * * * *
1562839 GAAAGAAAAGATTTTTTTGCAACACCAAAGCATCAATGTCAGGTACCCTAATGATGGGAATATGT
1 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
* ** * * *
1562904 TTTTGGTTCACAATCGTTTAAACTATGGTA-ACTCTTGCGAGAATCGATGCTTGTCTTATTTAAG
66 TTTTGGTTC-CAATCTTTTAAAGAATGG-AGACTGTTACGAGAATCGATTCTTGTCTTATTTAAG
** *
1562968 GGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAA-ATTTCCATGGAAAAGAAAATCATCA
129 GGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCA
* * * *
1563032 ATATCATTCATCAT-ATGGAGGAGAATGTATTTATAGTGCCTAATCACAAAATGAATGAAGATCA
194 ATATCATTTATCCTAAT-GAGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATGAAGATCA
* * * * *
1563096 TTACTAGAATCCATGTTTCTCTCATCTGAGGCACGAACTTAGACTTTACCA-AAATTGG-AAGTA
258 TTACTAGAAACCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA-CAGAAATTGGTGAGAA
* * * * * * * *
1563159 AAAATGCCTTTCTTACAAAACTAA-ACGATCAGTAT-ATGTATTCTGATGAGAAGACTATGTTTA
322 AAAAT-CCTTTCTTGCGAAACCAAGGC-ATCAATATCGTGTATCCTAATGAGAAGACTATGTTTA
* * * *
1563222 TGGTGCCTAACCCTGAAAA-AATGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAA-AGAT
385 TGGTG-CTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGAGAC
* *
1563285 GAACTTCGATTCGATCAAAAACGATG
449 AAACTTTGATTCGATCAAAAACGATG
* * * * *
1563311 GATAGAAAAGCTTTTCTTGCGACACCAAAGGATCAATGTCACGTATCCTAATGAATGGAATGTGC
1 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
* * *
1563376 TTTTGGTTCCAATCTTTTAAAGAATGGAGACTGTTACAAGAATCAATTCTTGTTTTATTTAAGGG
66 TTTTGGTTCCAATCTTTTAAAGAATGGAGACTGTTACGAGAATCGATTCTTGTCTTATTTAAGGG
* *
1563441 ATGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCAAT
131 ATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAAT
* * *
1563506 ATCATTTATCGTAATGA-GAGAACGTGTTTATAGTTCCTAATCACATAATGAATGAAGATCATTA
196 ATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATGAAGATCATTA
* ** *
1563570 CT-GAAACGCATGTTTGTCTCATTTAAGGCACGAACTTAGACTTTGTAGAAATTGGTGCGAAAAA
261 CTAGAAAC-CATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAAATTGGTGAGAAAAA
* * *
1563634 ATCCTTTCTTGCGAAACGAAGGCATCAATATCGTGTATCATTATGAGAAGACTATGTTTATGG-G
325 ATCCTTTCTTGCGAAACCAAGGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGTG
* * * * * * *
1563698 CCTTAATCTTGAAAAGTATAGGGATTAGTAGGACTATTACTGTTTATCTTATTTGATAGACAAAC
390 -C-TAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGAGACAAAC
* *
1563763 TTTGATTCTATCAAAAACCATG
453 TTTGATTCGATCAAAAACGATG
* * *
1563785 GAAAGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAACGAAGGGAATATGT
1 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
* * * ** *
1563850 TTCTGGTTCCTAATCTTTTAAGGAATGGTGACAATTACGAGAATCGATTCTTCTCTTATTTAAGG
66 TTTTGGTTCC-AATCTTTTAAAGAATGGAGACTGTTACGAGAATCGATTCTTGTCTTATTTAAGG
** * * * * *
1563915 GATAAACTTTGATTTTAATTAAAATAAGGTAAATAAAATATTTCCATCCAAAAGAAAATCATCAA
130 GATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
* *
1563980 TATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATT
195 TATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATGAAGATCATT
* * * **
1564045 ATTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTGTTAAAGA
260 ACTAGAAACCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAAATTGGTGAGAAA-A
* * * ** ** *
1564110 AA-CCCTTCTTGCAAAACCAAAGTGTCAATATAATGTATCCTAATAAGAAGACTATGTTTATGGT
324 AATCCTTTCTTGCGAAACCAAGGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGT
* * *
1564174 GCGTAAGCGTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTT-TTTAAAGAGACAAA
389 GC-TAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTT-AAGAGACAAA
** *
1564238 CTTTGATTTAATAAAAAACGGA-G
452 CTTTGATTCGATCAAAAAC-GATG
* * *
1564261 GAAAGAAAAACTTTTCTTGCAACACCAAAGCATCAATGTCATGTAACCTAATGAAGGGAATGTGT
1 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
* * * * * *
1564326 TTTTTGTTCCTAATTTTTTTAAA-AATGGAGACTGTTAAGAGAATCAATTCTTGTCTTGTTTAAA
66 TTTTGGTTCC-AA-TCTTTTAAAGAATGGAGACTGTTACGAGAATCGATTCTTGTCTTATTTAAG
* * * * * *
1564390 GGATGAACTTTGATTTTCAGAAAAATAGGGTAAAGAAAAGATTTCTATGAAAAAGAAAATTATCA
129 GGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCA
* *
1564455 ATATCATTTATCCTAATGAGGAGAAT-TATTTATAGTGCCTAATCACATAATGTATGAAGATCAT
194 ATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATGAAGATCAT
* ** * * * * * * * * *
1564519 TTCCGGAACCCATTTTTGTCTTATTTGAGGCACAAACTTATACTTTATAGCAATTGGTGCGAGAA
259 TACTAGAAACCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAAATTGGTGAGAAAA
* * * * * *
1564584 AAGCCTTTCTTGTGAAACTAAGGCAACAATATCGTGCATCCCAATGAGAAGACTATGTTTATGGT
324 AATCCTTTCTTGCGAAACCAAGGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGT
* * * * * *
1564649 GCTTAGTCTTGAAAAGAA-GGGGATTAGTGTGACTATTCATGTTTGTCTTATATATGACACAAAC
389 GC-TAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGAGACAAAC
* * *
1564713 TTTGATTCTATCAAAAATGGTG
453 TTTGATTCGATCAAAAACGATG
* * * * * * *
1564735 GAAGGAAAAGCTTTTCTTACGATACCAAAACATCAATGTCAAGTATCCTAATAAAGGGAATCTGT
1 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
* ** * * ** *
1564800 TTTTTGTTCCAATCTTGAAAAGAATGGAGACTATTACGAGAAT-TAGTGATTGTCGTATTTTAA-
66 TTTTGGTTCCAATCTTTTAAAGAATGGAGACTGTTACGAGAATCGA-TTCTTGTCTTA-TTTAAG
* * * * *
1564863 GGA-AGAACTTTGATTTCAAGGAAAATAAGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCTTC
129 GGATA-AACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATC
* * * *
1564927 AATATCATTTATCCTAATAAGGAGAATATGTTTATAGCGCCTAGTCACATAATGAATGAAGATCA
193 AATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATGAAGATCA
* * * * * * *
1564992 TTACTAGAACCCTTGTTTGTCTCATTTGAGGCACGGACTTAGACTTTATAGAATTTGGTGGGAAT
258 TTACTAGAAACCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAAATTGGTGAGAAA
* * ** * * **
1565057 AAAGCTTTTCTTATGAAACCAAGGCATCAATGTTGTGTATCCTTGTGAAGAA-ACTATGTTTATG
323 AAATCCTTTCTTGCGAAACCAAGGCATCAATATCGTGTATCCTAATG-AGAAGACTATGTTTATG
* * * * *
1565121 GTGCGTAATC-CGAAAAAGAATGGAGATTAGTATGACTCTTATTGTTTGTCTTATTTAAAAGACA
387 GTGC-TAATCTTG-AAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGAGACA
*
1565185 AACTTTAATTCGATCAAAAACGATG
450 AACTTTGATTCGATCAAAAACGATG
* **
1565210 GAAAGAAAAGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAAATGT
1 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
* * * * * * *
1565275 TTTTGGTTCCCAATCTTTTAAAAAATGGTGACTATTATGAGAATCGATGCTTGTCTTTTTTGAGG
66 TTTTGGTT-CCAATCTTTTAAAGAATGGAGACTGTTACGAGAATCGATTCTTGTCTTATTTAAGG
**** * * *
1565340 GATAAACTTTGATTTTTTTTTAAAATAGGGCAAAGAAAAGATTTCCAAGCAAACGAAAATCATTA
130 GATAAACTTTGA-TTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCA
* *
1565405 ATATCATTTATCCTCAA-GAGTTAGAA--TG----T-GT--C--A-CA-A-AATGAATGAACATC
194 ATATCATTTATCCT-AATGAG-GAGAATGTGTTTATAGTGCCTAATCACATAATGAATGAAGATC
* ** * * *
1565455 ATTACTAGAATCCATGTTTGTCTTTTTTAAGGCACGAACTTAGACTTTACAAAAATTGGTG-GTA
257 ATTACTAGAAACCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAAATTGGTGAGAA
* * ** * *
1565519 GAAATGCCTTTCTTGTGAAACCAAACCATCAATATCATGTATCCTAATGAGAAAACT-TGTTTAT
322 AAAAT-CCTTTCTTGCGAAACCAAGGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTAT
* * * * * *
1565583 CGTGGCTAATCTTGAAAAGAATGAGGATTTGTATGCCTACTAATGTTTGTCTTGTTTAAGAGACA
386 GGT-GCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGAGACA
* *
1565648 AACTTCGATTCGATCAAAAACGGTG
450 AACTTTGATTCGATCAAAAACGATG
* ** * *
1565673 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAGTGTCGCGTATCCTAATGAAGGAAATGTAT
1 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
* * * * * *
1565738 TTTTGGTTTGCAATCTCTTAAAGAGTGGAGACTGTGACAAGAATTGATTCTTGTCTTATTTAAGG
66 TTTTGG-TTCCAATCTTTTAAAGAATGGAGACTGTTACGAGAATCGATTCTTGTCTTATTTAAGG
* * * *
1565803 GGTGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCACGCAAAAGAAAATCGTCAA
130 GATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
* * * * *
1565868 AATCATTTATCCTAATGAGGAGAATGCGTTTATAGCGCCTAGTCACATAATGAATGAAGATCATA
195 TATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATGAAGATCATT
* * * *
1565933 ACTGGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGGCTTTACAGAATTTGGGGTGA-AAA
260 ACTAGAAACCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAAATT--GGTGAGAAA
* * * * * *
1565997 AAATCTTTTCTTGCGACACCAAAGTATCAATGTCATGTATCCTAATGAG
323 AAATCCTTTCTTGCGAAACCAAGGCATCAATATCGTGTATCCTAATGAG
1566046 GGGAATGTGT
Statistics
Matches: 2663, Mismatches: 472, Indels: 141
0.81 0.14 0.04
Matches are distributed among these distances:
461 6 0.00
462 60 0.02
463 204 0.08
464 107 0.04
465 1 0.00
466 2 0.00
467 1 0.00
468 1 0.00
469 1 0.00
470 7 0.00
471 190 0.07
472 178 0.07
473 191 0.07
474 538 0.20
475 600 0.23
476 486 0.18
477 84 0.03
478 6 0.00
ACGTcount: A:0.35, C:0.14, G:0.18, T:0.32
Consensus pattern (474 bp):
GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
TTTTGGTTCCAATCTTTTAAAGAATGGAGACTGTTACGAGAATCGATTCTTGTCTTATTTAAGGG
ATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAAT
ATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATGAAGATCATTA
CTAGAAACCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAAATTGGTGAGAAAAAA
TCCTTTCTTGCGAAACCAAGGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGTGC
TAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGAGACAAACTTT
GATTCGATCAAAAACGATG
Found at i:1566268 original size:316 final size:318
Alignment explanation
Indices: 1565673--1566304 Score: 831
Period size: 316 Copynumber: 2.0 Consensus size: 318
1565663 AAAAACGGTG
* *
1565673 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAGTGTCGCGTATCCTAATGAAGGAAATGTAT
1 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCACGTATCCTAATGAAGGAAATGTAT
** * * * *
1565738 TTTTGGTTTGCAATCTCTTAAAGAGTGGAGACTGTGACAAGAATTGATTCTTGTCTTATTTAAGG
66 TTTTGGTTCCCAATCTCTAAAAGAATGGAGACTGTGACAAGAATTAATTATTGTCTTATTTAAGG
** * *
1565803 GGTGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCACGCAAAAGAAAATCGTCAA
131 GAAGAACTTTGATTTCAAGAAAAATAAGGCAAAG-AAAGATTTCCACGCAAAAGAAAATCGTCAA
* * * * *
1565868 AATCATTTATCCTAATGAGGAGAATGCGTTTATAGCGCCTAGTCACATAATGAATGAAGATCATA
195 AATCATTTAGCCTAATGAGGAGAACGCGTTTATAGCACCTAATCACATAATAAATGAAGATCATA
* * *
1565933 ACTGGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGGCTTTACAGAATTTGGGGT
260 ACTGAAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAATTTGGGGT
* * * * * *
1565992 GAAA-AAAATCTTTTCTTGCGACACCAAAGTATCAATGTCATGTATCCTAATGAGGGGAATGTGT
1 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCACGTATCCTAATGAAGGAAATGTAT
* * *
1566056 TTTTTGTTCCCAATCT-TGAAAAGAATGGAGACTGTTACGAGAATTAATTATTGTCTTACTTT-A
66 TTTTGGTTCCCAATCTCT-AAAAGAATGGAGACTGTGACAAGAATTAATTATTGTCTTA-TTTAA
* * * * * *
1566119 TGGAAGAACTTTGATTTCGAGGAAAATAAGGCAAAG-AAGATTTTCATGCAAAAGAAAATCTTCA
129 GGGAAGAACTTTGATTTCAAGAAAAATAAGGCAAAGAAAGATTTCCACGCAAAAGAAAATCGTCA
* * **
1566183 ATATCATTTAGCCTAATGAGGAGAACGTGTTTATAGCATTTAATCACATAATAAATGAAGATCAT
194 AAATCATTTAGCCTAATGAGGAGAACGCGTTTATAGCACCTAATCACATAATAAATGAAGATCAT
* * *
1566248 TACTGAAACCCTTGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAGAATTTGG
259 AACTGAAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAATTTGG
1566305 TAAGGAAAAA
Statistics
Matches: 269, Mismatches: 42, Indels: 7
0.85 0.13 0.02
Matches are distributed among these distances:
316 132 0.49
317 1 0.00
318 129 0.48
319 7 0.03
ACGTcount: A:0.34, C:0.14, G:0.20, T:0.31
Consensus pattern (318 bp):
GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCACGTATCCTAATGAAGGAAATGTAT
TTTTGGTTCCCAATCTCTAAAAGAATGGAGACTGTGACAAGAATTAATTATTGTCTTATTTAAGG
GAAGAACTTTGATTTCAAGAAAAATAAGGCAAAGAAAGATTTCCACGCAAAAGAAAATCGTCAAA
ATCATTTAGCCTAATGAGGAGAACGCGTTTATAGCACCTAATCACATAATAAATGAAGATCATAA
CTGAAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAGAATTTGGGGT
Found at i:1566850 original size:474 final size:472
Alignment explanation
Indices: 1566002--1566990 Score: 1163
Period size: 474 Copynumber: 2.1 Consensus size: 472
1565992 GAAAAAAATC
* * * * *
1566002 TTTTCTTGCGACACCAAAGTATCAATGTCATGTATCCTAATGAGGGGAATGTGTTTTTTGTTCCC
1 TTTTCTTGCGACACCAAAGCATCAATGTCACGTATCCTAATGAGGGGAATATGTTTTTGGTTCAC
* * * * *
1566067 AATCTTGAAAAGAATGGAGACTGTTACGAGAATTAATTATTGTCTTACTTTATGGAAGAACTTTG
66 AATCTTGAAAACAATGGAGACTCTTACGAGAATCAATGATTGTCTTACTTTAGGGAAGAACTTTG
* * * * * *
1566132 ATTTCGAGGAAAATAAGGCAAAGAAGATTTTCATGCAAAAGAAAATCTTCAATATCATTTAGCCT
131 ATTTCAAGGAAAATAAGGCAAAGAAAATTTCCATGCAAAAGAAAATCATCAATATCATTCAGCAT
* ** * *
1566197 AATGAGGAGAACGTGTTTATAGCATTTAATCACATAATAAATGAAGATCATTACTGAAACCCTTG
196 AATGAGGAGAACGTATTTATAGCACCTAATCACAAAATAAATGAAGATCATTACTGAAACCCATG
* * * * ***
1566262 TTTGTCTCATTTGAGGCACGAACTTAGACTTTATAGAATTTGGTAAGGAAAAATCCTTTCTTGTG
261 TTTCTCTCATCTGAGGCACGAACTTAGACTTTACAGAAATTGGTAAGGAAAAATCCTTTCTTACA
* * * * *
1566327 AAACCAAGGCATCAATATCGTGTATCCTTGTGAGAAAACTATGTTTATGGTGCCTAATCGTAAAA
326 AAACAAACGCATCAATATCATGTATCCTTGTGAGAAAACTATGTTTATGGTGCCTAACCCTAAAA
* *
1566392 AGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAGAGACAAACTTTGATTCGATCAA
391 A-AATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAA-AGACAAACTTCGATTCGATCAA
* *
1566457 AAATGGTGGAAAGAAAAGA
454 AAACGATGGAAAGAAAAGA
* * * * *
1566476 TTTTTTTGCAACACCAAAGCATCAATGTCAGGTACCCTAATGATGGGAATATGTTTTTGGTTCAC
1 TTTTCTTGCGACACCAAAGCATCAATGTCACGTATCCTAATGAGGGGAATATGTTTTTGGTTCAC
* * * * *
1566541 AATCGTT-TAAACTATGGTA-ACTCTTGCGAGAATCGATGCTTGTCTTA-TTTAAGGGATA-AAC
66 AATC-TTGAAAACAATGG-AGACTCTTACGAGAATCAATGATTGTCTTACTTT-AGGGA-AGAAC
* ** * *
1566602 TTTGATTTTAATTAAAATAGGGCAAAGAAAAATTTCCATGGAAAAGAAAATCATCAATATCATTC
127 TTTGATTTCAAGGAAAATAAGGCAAAG-AAAATTTCCATGCAAAAGAAAATCATCAATATCATTC
* * ** *
1566667 ATCAT-ATGGAGGAGAATGTATTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACT-AGA
191 AGCATAAT-GAGGAGAACGTATTTATAGCACCTAATCACAAAATAAATGAAGATCATTACTGA-A
* *
1566730 ATCCATGTTTCTCTCATCTGAGGCACGAACTTAGACTTTACCA-AAATTGG-AAGTAAAAATGCC
254 ACCCATGTTTCTCTCATCTGAGGCACGAACTTAGACTTTA-CAGAAATTGGTAAGGAAAAAT-CC
* * *
1566793 TTTCTTACAAAACTAAACG-ATCAGTAT-ATGTATTC-TGATGAGAAGACTATGTTTATGGTGCC
317 TTTCTTACAAAAC-AAACGCATCAATATCATGTATCCTTG-TGAGAAAACTATGTTTATGGTGCC
* * **
1566855 TAACCCTGAAAAAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAAAGATGAACTTCGA
380 TAACCCTAAAAAAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAAGACAAACTTCGA
* *
1566920 TTCGATCAAAAACGATGGATAGAAAAGC
445 TTCGATCAAAAACGATGGAAAGAAAAGA
*
1566948 TTTTCTTGCGACACCAAAGGATCAATGTCACGTATCCTAATGA
1 TTTTCTTGCGACACCAAAGCATCAATGTCACGTATCCTAATGA
1566991 ATGGAATGTT
Statistics
Matches: 432, Mismatches: 72, Indels: 24
0.82 0.14 0.05
Matches are distributed among these distances:
472 72 0.17
473 43 0.10
474 168 0.39
475 145 0.34
476 4 0.01
ACGTcount: A:0.35, C:0.14, G:0.18, T:0.32
Consensus pattern (472 bp):
TTTTCTTGCGACACCAAAGCATCAATGTCACGTATCCTAATGAGGGGAATATGTTTTTGGTTCAC
AATCTTGAAAACAATGGAGACTCTTACGAGAATCAATGATTGTCTTACTTTAGGGAAGAACTTTG
ATTTCAAGGAAAATAAGGCAAAGAAAATTTCCATGCAAAAGAAAATCATCAATATCATTCAGCAT
AATGAGGAGAACGTATTTATAGCACCTAATCACAAAATAAATGAAGATCATTACTGAAACCCATG
TTTCTCTCATCTGAGGCACGAACTTAGACTTTACAGAAATTGGTAAGGAAAAATCCTTTCTTACA
AAACAAACGCATCAATATCATGTATCCTTGTGAGAAAACTATGTTTATGGTGCCTAACCCTAAAA
AAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAAGACAAACTTCGATTCGATCAAAA
ACGATGGAAAGAAAAGA
Found at i:1571995 original size:42 final size:42
Alignment explanation
Indices: 1571940--1572058 Score: 193
Period size: 42 Copynumber: 2.8 Consensus size: 42
1571930 TTCTTCTCTC
* *
1571940 CTCCTCCTGTCATCCCTCCTCTCTCTATTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
*
1571982 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
* *
1572024 CTCCTCCTATCATCCCTCCTCTCTCTTCTTTCTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCT
1572059 TTGAGGGCTA
Statistics
Matches: 71, Mismatches: 6, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
42 71 1.00
ACGTcount: A:0.08, C:0.46, G:0.03, T:0.43
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
Found at i:1571999 original size:12 final size:11
Alignment explanation
Indices: 1571973--1572048 Score: 52
Period size: 12 Copynumber: 6.9 Consensus size: 11
1571963 TCTATTATCT
*
1571973 CTCCTGTCTCTC
1 CTCCTATCTC-C
1571985 CTCCTATCATCC
1 CTCCTATC-TCC
1571997 CTCCTATCT--
1 CTCCTATCTCC
*
1572006 CTACTATCT--
1 CTCCTATCTCC
*
1572015 CTCCTGTCTCTC
1 CTCCTATCTC-C
1572027 CTCCTATCATCC
1 CTCCTATC-TCC
*
1572039 CTCCTCTCTC
1 CTCCTATCTC
1572049 TTCTTTCTCT
Statistics
Matches: 53, Mismatches: 6, Indels: 11
0.76 0.09 0.16
Matches are distributed among these distances:
9 15 0.28
11 3 0.06
12 31 0.58
13 4 0.08
ACGTcount: A:0.09, C:0.49, G:0.03, T:0.39
Consensus pattern (11 bp):
CTCCTATCTCC
Found at i:1572000 original size:24 final size:24
Alignment explanation
Indices: 1571964--1572049 Score: 85
Period size: 24 Copynumber: 3.8 Consensus size: 24
1571954 CCTCCTCTCT
* *
1571964 CTATTATCTCTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
* *
1571988 CTATCATCCCTCC--TATCT-CTA
1 CTATCATCCCTCCTGTCTCTCCTC
1572009 CTATC-T--CTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
*
1572030 CTATCATCCCTCCTCTCTCT
1 CTATCATCCCTCCTGTCTCT
1572050 TCTTTCTCTT
Statistics
Matches: 49, Mismatches: 7, Indels: 12
0.72 0.10 0.18
Matches are distributed among these distances:
18 4 0.08
20 5 0.10
21 14 0.29
22 5 0.10
24 21 0.43
ACGTcount: A:0.10, C:0.45, G:0.02, T:0.42
Consensus pattern (24 bp):
CTATCATCCCTCCTGTCTCTCCTC
Found at i:1572024 original size:18 final size:18
Alignment explanation
Indices: 1571955--1572025 Score: 52
Period size: 18 Copynumber: 3.6 Consensus size: 18
1571945 CCTGTCATCC
* *
1571955 CTCCTCTCTCTATTATCT
1 CTCCTGTCTCTACTATCT
*
1571973 CTCCTGTCTCTCCTCCTATCAT
1 CTCCTG--TCT-CTACTATC-T
*
1571995 CCCTCCTATCTCTACTATCT
1 --CTCCTGTCTCTACTATCT
1572015 CTCCTGTCTCT
1 CTCCTGTCTCT
1572026 CCTCCTATCA
Statistics
Matches: 41, Mismatches: 6, Indels: 12
0.69 0.10 0.20
Matches are distributed among these distances:
18 15 0.37
20 4 0.10
21 13 0.32
22 4 0.10
24 5 0.12
ACGTcount: A:0.10, C:0.44, G:0.03, T:0.44
Consensus pattern (18 bp):
CTCCTGTCTCTACTATCT
Found at i:1575544 original size:949 final size:947
Alignment explanation
Indices: 1573681--1612816 Score: 12590
Period size: 949 Copynumber: 41.3 Consensus size: 947
1573671 TCAAATGTGC
* * *
1573681 TTTTGGTT-CCAATCTTTTAAAGAATGGAGACTGTTACA-AGAATCAATTCTTGTTTTATTTAAG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTA-AGAGAATCAATGCTTGTCTTATTTAAG
*
1573744 GGATGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCA
65 GGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCA
* * *
1573809 ATATCATTTATCGTAATGA-GAGAACGTGTTTATAGTTCCTAATCACATAATGAATGAAGATCAT
130 ATATCATTTATCCTAATGAGGAGAA-TTGTTTATAGTGCCTAATCACATAATGAATGAAGATCAT
* * * *
1573873 TACT-GAAACGCATGTTTGTCTCATTTAAGGCACGAACTTAGACTTTGTAGAAATTGGTGCGAAA
194 TACTAG-AACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAA
* * * * *
1573937 AAATCCTTTCTTGCGAAACGAAGGCATCAATATCGTGTATCATTATGAGAAGACTATGTTTATGG
258 AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGG
* * * * * *
1574002 -GCCTTAATCTTGAAAAGTATAGGGATTAGTAGGACTATTACTGTTTATCTTATTTGATAGACAA
323 TGCC-TAATCTTGAAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTCTTATTTAAGAGACAA
* *** *
1574066 ACTTTGATTCTATCAAAAACCATGGAAAGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCA
386 ACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
* * * * * **
1574131 TGTATCCTAACGAAGGGAATATGTTTCTGGTTCCTAATATTTTAAGGAATGGTGACAATTACGAG
451 TGTATCCTAATGAAGGGAATATGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTGTTACGAG
* * * * * * * *
1574196 AATCGATTCTTCTCTTATTTAAGGGATAAACTTTGATTTTAATTAAAATAAGGTAAATAAAATAT
515 AATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGAT
* * *
1574261 TTCCATCCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTA
580 TTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTA
* *
1574326 ATCACAGAATGAATGAAGATCATTATTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGA
645 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGA
** * * * ** *
1574391 CTTTACAAAAATTGGTGTTAAAGAAACCCTTCTTGCAAAACCAAAGTGTCAATATAATGTATCCT
710 CTTTACAAAAATTGGTGGGAAA-AAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCT
* * *
1574456 AAT-AAGAAGACTATGTTTATGGTGCGTAAGCGTGAAAAGAATGGGGATTTGTATGACTATTAAT
774 AATGAA-AAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATGACTATTATT
** * *
1574520 GTTTGTCTT-TTTAAAGAGACAAACTTTGATTTAATAAAAAACGGA-GGAAAGAAAAACTTTTCT
837 GTTTGTCTTATTTAAA-AGACAAACTTTGATTCGATCAAAAAC-GATGGAAAGAAAAGCTTTTCT
* *
1574583 TGCGACACCAAAGCATCAATGTCATGTAACCTAATGAAGGGAATGTGT
900 TGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * * * * * *
1574631 TTTTTGTTCCTAATTTTTTTAAA-AATGGAGACTGTTAAGAGAATCAATTCTTGTCTTGTTTAAA
1 TTTTGGTTCCCAA-TCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAG
* * * * *
1574695 GGATGAACTTTGATTTTCAGAAAAATAGGGTAAAGAAAAGATTTCTATGAAAAAGAAAATTATCA
65 GGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCA
* *
1574760 ATATCATTTATCCTAATGAGGAGAATTATTTATAGTGCCTAATCACATAATGTATGAAGATCATT
130 ATATCATTTATCCTAATGAGGAGAATTGTTTATAGTGCCTAATCACATAATGAATGAAGATCATT
* ** * * * ** *
1574825 TCCGGAACCCA-GTTTTGTCTTATTTGAGGCACAAACTTATACTTTATAGCAATTGGTGCGAGAA
195 ACTAGAACCCATG-TTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAAA
* * * * * *
1574889 AAGCCTTTCTTGTGAAACTAAGGCAACAATATCGTGCATCCCAATGAGAAGACTATGTTTATGGT
259 AAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGT
* * * * * * *
1574954 GCTTAGTCTTGAAAAGAA-GAGGATTAGTGTGACTATTCATGTTTGTCTTATATATGACACAAAC
324 GCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTCTTATTTAAGAGACAAAC
* * * * * *
1575018 TTTGATTCTATCAAAAATGGTGGAAGGAAAAGCTTTTCTTACGATACCAAAACATCAATGTCAAG
388 TTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* * * ** *
1575083 TATCCTAATAAAGGGAATCTGTTTTTTGTTCCAATCTTGAAAAGAATGGAGACTATTACGAGAAT
453 TATCCTAATGAAGGGAATATGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTGTTACGAGAAT
* * * * *
1575148 T-AGTGATTGTCGTATTTTAA-GGA-AGAACTTTGATTTCAAGGAAAATAAGGCAAAGAAAAGAT
518 TGA-TGCTTGTCTTA-TTTAAGGGATA-AACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGAT
* * * *
1575210 TTTCATGCAAAAGAAAATCTTCAATATCATTTATCCTAATAAGGAGAATATGTTTATAGCGCCTA
580 TTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTA
* * * *
1575275 ATCACATAATGAATGAAGATCATTACTAGAACCCTTGTTTGTCTCATTTGAGGCACGGACTTAGA
645 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGA
* * * * ** * * **
1575340 CTTTATAGAATTTGGTGGGAATAAAGCTTTTCTTATGAAACCAAGGCATCAATGTTGTGTATCCT
710 CTTTACAAAAATTGGTGGGAA-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCT
** * * * * *
1575405 TGTGAAAAAACTATGTTTATGGTGCCTAATCCGAAAAAGAATGGAGATTAGTATGACTCTTATTG
774 AATGAAAAGACTATGTTTATGGTGCCTAATCTG-AAAAGAATGGGGATTTGTATGACTATTATTG
* *
1575470 TTTGTCTTATTTAAAAGACAAACTTTAATTCGATCAAAAACGATGGAAAGAAAAGCATTTCTTGC
838 TTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACGATGGAAAGAAAAGCTTTTCTTGC
*
1575535 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAAATGT
903 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * * * * *
1575580 TTTTGGTTCCCAATCTTTTAAAAAATGGTGACTATTATGAGAATCGATGCTTGTCTTTTTTGAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
**** * * * *
1575645 GATAAACTTTGATTTTTTTTTAAAATAGGGCAAAGAAAAGATTTCCAAGCAAACGAAAATCATTA
66 GATAAACTTTGA-TTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCA
* *
1575710 ATATCATTTATCCTCAA-GAGTTAGAA-TG----T-GT--C--A-CA-A-AATGAATGAACATCA
130 ATATCATTTATCCT-AATGAG-GAGAATTGTTTATAGTGCCTAATCACATAATGAATGAAGATCA
* ** * * *
1575761 TTACTAGAATCCATGTTTGTCTTTTTTAAGGCACGAACTTAGACTTTACAAAAATTGGTG-GTAG
193 TTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCG-AA
* * * * * *
1575825 AAATGCCTTTCTTGTGAAACCAAACCATCAATATCATGTATCCTAATGAGAAAACT-TGTTTATC
257 AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATG
* * * * * *
1575889 GTGGCTAATCTTGAAAAGAATGAGGATTTGTATGCCTACTAATGTTTGTCTTGTTTAAGAGACAA
322 GTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTA-TTATGTTTGTCTTATTTAAGAGACAA
* * *
1575954 ACTTCGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAGTGTCA
386 ACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
* * * * * * * * *
1576019 CGTATCCTAATGAAGGAAATGTATTTTTGGTTTGCAATCTCTTAAAGAGTGGAGACTGTGACAAG
451 TGTATCCTAATGAAGGGAATATGTTTTTGG-TTCCAATCTTTTAAAGAATGGAGACTGTTACGAG
* * * *
1576084 AATTGATTCTTGTCTTATTTAAGGGGTGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGAT
515 AATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGAT
* * *
1576149 TTCCACGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAACGTGTTTATAGTGCCTA
580 TTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTA
* * * * * * * *
1576214 GTCACAAAAAGAATGAATATCATTACTGGAACCCATGTTTATCTCATTAGAGGCATGAACTTAGA
645 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGA
* * * * * * * *
1576279 CTTTGCAGAATTTAGTGTGAAAAAAACCTTTCTTGTGAAACCAAGGCATCAATATCATGTA-CCA
710 CTTTACAAAAATTGGTG-GGAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC-
* * * * *
1576343 TTATGAGAATACTATGTTTATGG-GTCCTAATCTTGAAAAGTATGGGGATTAGTATGACTATTAT
773 TAATGAAAAGACTATGTTTATGGTG-CCTAATC-TGAAAAGAATGGGGATTTGTATGACTATTAT
* * * *
1576407 TGTTTGCCTTATTTGAGAGA-AAACTTTGATTCGATCACAAA-GCATGGAAAGAAAAG-TTTTCT
836 TGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACG-ATGGAAAGAAAAGCTTTTCT
1576469 TGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
900 TGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
** * * * * *
1576517 TTTTGGTTCCCAATCTTTTAGGGAATGGTGACTATTACA-ATAATCGATTCTTCTCTTATTTAAG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTA-AGAGAATCAATGCTTGTCTTATTTAAG
** * * *
1576581 GGATAAACTTTGATTTTAATTAAAATAGGGTAAAGAAAAGATTTCCATGCAAAAAAAAATTATGA
65 GGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCA
* *
1576646 ATATCATTTATCCTAATGCGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCAT
130 ATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGATCAT
** * * * * * *
1576711 TACTAGAGTCCATGTTTGCCTCATTTGAGGCATGAATTTAGACTTTACAAAAATTGGCGGGAAAA
194 TACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAAA
* * *
1576776 AAG-CTCTTCTTCCAAAACTAAAGCATCAATAT-GATGTATCCTAATGAGAAGACTATGTTTATG
259 AAGCCT-TTCTTGCGAAACCAAAGCATCAATATCG-TGTATCCTAATGAGAAGACTATGTTTATG
* * * * * *
1576839 GTGCCTAACCCT-AAAAAAATGGGGATTTGTATGGCTATTAATGTTTGTCATT-TTTAGGAGACA
322 GTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTC-TTATTTAAGAGACA
* * * *
1576902 AACTTTGATTCAATCAAAAGTGGAGGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATGTC
385 AACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC
* * * *
1576967 ATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCTAATCTTTTAAAGAATGGAGACTATTACAA
450 ATGTATCCTAATGAAGGGAATATGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTGTTACGA
** * * * * *
1577032 GAATCAATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGGTAAAGAGAAGA
514 GAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGA
* * * * *
1577097 TTTACATGCAAAAAAAAATCATCAATATCATTTATCCTAATGAGAAGAAT-CGTTTATAGTGACT
579 TTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCT
* * * * * ** * * * * * *
1577161 AATGACATAATGAGTGAAGATCTTTGCCGGAAACCATATTTGTATCATTTAAGGCACAAACTTAT
644 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAG
* * * * * * * *
1577226 ACTTTATAGAAAGTGGTGCAGAAATAGCCTTTCTTGCGAAACCAAGGAATCAATATCATGTATTC
709 ACTTTACAAAAATTGGTG-GGAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC
* * * * * *
1577291 TAA-CAAGAAGACTATGTTTATGGTGCCTAATCTTAAAAAGAATAGGGATTAGTATTACTACTGA
773 TAATGAA-AAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATGACTA-TTA
* * ** * *
1577355 TT-TTTGTCTTATATAAGACG-CAAACTTTGATTATATCAAAAA-TAGTGGAAGGAAAAGCTTTT
835 TTGTTTGTCTTATTTAA-AAGACAAACTTTGATTCGATCAAAAACGA-TGGAAAGAAAAGCTTTT
* * * *
1577417 CTTGTGACA-CAAAACATCAATGTCAAGTATCCTAATGAAGGGAATGTGT
898 CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * ** * * ** * * * * *
1577466 TTTTCGTT-CCAATCATGAAAAGAATGGAGACTATTACTAGAATTAGTGATTGCCTTATTTTAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
* * * *
1577530 GA-AGAACTTTGATTTCAAGGAAAATAAGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCT-TC
66 GATA-AACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAAT-TATC
* * * *
1577593 AATACCACTTATCCTAATGAGGAGAATATGTTTATAGCGCCCAATCACATAATGAATGAAGATCA
129 AATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGATCA
** * * * * * * *
1577658 TTACCGGAACTCATGTTTGTCTCATTTGAGGCATGAACTTAGACTCTATAGAATTTGGTGGGAAT
193 TTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAA
* * * ** * *
1577723 AAAG-ATGTTCTTGCCAAACCAAGGCATCAATATCGTGTATCCTTGTGAAAAAACTATGTTTATG
258 AAAGCCT-TTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATG
* * * *
1577787 GTGCCTAATCCTAAAAAGAATGGGGATTAGTAAGACTATTATTGTTTGTCTTATTTAACAGACAA
322 GTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTCTTATTTAAGAGACAA
* * ** *
1577852 ACTTTAATTCGATAAAAAAAT-GTGGAAAGAAAAGCTTTTCTTGTTACACCAAAGCATCGATGTC
386 ACTTTGATTCGAT-CAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC
* *
1577916 ATGTATCCTAATGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTACGA
450 ATGTATCCTAATGAAGGGAATATGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTGTTACGA
** * * * * *
1577981 GAATTGACACTTGTCTTCTTTAAGCGATAAACTTTGATTTTAATTAAAATATGGTAAAGAAAAGA
514 GAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGA
* * * *
1578046 TTTTCATGCAAAA-AAAATCATCAATATCATTTATCCTAAGGAAGAGAATGTTTTTATAATGCCT
579 TTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCT
* * * ** * *
1578110 AATCAAAAAATAAATAAAGATTTTTGCTAGAATCCATGTTTGTCTCATTT-AGGGCACAAACTTA
644 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGA-GGCACGAACTTA
* * * * * * * *
1578174 GACTTTACAAAAATTGGTAGTAAAAGTGCCTGTCTTACGAAACCAAACCATTAATATCATGTATT
708 GACTTTACAAAAATTGGTGGGAAAA-AGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATC
* * ** * *
1578239 CTAATGAGAAGACTATCTTTGCGGGGCTTAATCCTGAAAAGAATGGGGATTTGTATGACTATTAT
772 CTAATGAAAAGACTATGTTTATGGTGCCTAAT-CTGAAAAGAATGGGGATTTGTATGACTATTAT
** * *
1578304 TGTTTGTCTTATTTAAGGGACAAACTTTGATTCGGTCAACAACGATGGAAAGAAAAGCTTTTCTT
836 TGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACGATGGAAAGAAAAGCTTTTCTT
* ** * *
1578369 GTGACACCAAAGCATCGGTGTCATGTATCCTAAAGAAGGGAATATGA
901 GCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * * *
1578416 TTTTGGTT-TCAATCTTTTAAAGAATGGTGACTGTTATGGGAATCGATGCTTGTCTTATTTAAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
* * * ** * * *
1578480 GGTAAACTTTGATATCAACTAAAATAGGGTAAAGAAAAGATTTCCAAGCAAAAGAAAATCATCAA
66 GATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCAA
***
1578545 TATCATTTATCCTAA-GAGGGAGAA-TG----T-GT--C----C-CATAATGAGCAAAGATCATT
131 TATCATTTATCCTAATGA-GGAGAATTGTTTATAGTGCCTAATCACATAATGAATGAAGATCATT
* * *
1578596 AGTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTG-GAAAAA
195 ACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAAAA
* * * * * * *
1578660 ATGCCTTCCCTGTGAAACCAAACCATCAATATCATGTATCCTAATGAGAAGATTGTGTTTATGGT
260 A-GCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGT
* *
1578725 GCCTAATCTTGAAAAGAATGGGGATTTGTATGACT-TTAATGTTTGTCTTATTGCAA-AGACAAA
324 GCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTCTTATT-TAAGAGACAAA
* * *
1578788 CTTTGATTCGATCAAAAATAGTGGAAAGAAAAGCTTTTCTTGCGACACTATAGCATCAATGTCA-
387 CTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* * * ** **
1578852 GCTATCCTAAAGAAGGGAAAATGTTTTTGGTTCCCAATCCTTTT-AAGAATAGTTACTGTTGTGA
452 G-TATCCTAATGAAGGGAATATGTTTTTGGTT-CCAAT-CTTTTAAAGAATGGAGACTGTTACGA
* * * * *
1578916 GAATCGATACTTGTCTTAGTGAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAG-
514 GAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGA
* * * *
1578980 TTTTCCATGCAAAAGAAAATCATCAAAATCATTTATCCTGATGAGGGGAATGTGTTTATGGTG-C
579 TTTT-CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCC
* * ** *
1579044 TAAATCACAAAATGAATGAAGATCATTAC-AAAATCCGTGTTTGTCTCATTTGAGGCTTGAACAT
643 T-AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTT
* * *
1579108 AGACTTTACAAAAATTGGTAGGAAAAGAGCCTTTCTTGC-AACGCCAAAGCATCAATATGATGTA
707 AGACTTTACAAAAATTGGTGGGAAAA-AGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTA
* * * * *
1579172 TCGTAAAGAGAAGACTATGCTTATGGTGCATAATCATGAAAAGAATGGGGATTTGTATGACTATT
770 TCCTAATGAAAAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATGACTATT
* * * * *
1579237 AATGTTTGTCTTATTTAAGAGACAAACATTGATTCGATCAAAAA-AAGTGGAATGAAAAGCTTTT
834 ATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACGA-TGGAAAGAAAAGCTTTT
* * * * *
1579301 CTTGCGACACCAAAGCATCCATGTTATGTA-CCTAATGACGGGATTGTGT
898 CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * * * * *
1579350 TTTTGGTTCCCAATCTTTTAAATAATGGGGAC-GAATACGAGAATCGATGCTTGTCTTATTTAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTG-TTAAGAGAATCAATGCTTGTCTTATTTAAG
* *
1579414 GGATGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCATAAGAAAATTATCA
65 GGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCA
* *
1579479 ATATCA-TTATCCTAATGTGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATAAAGATCAT
130 ATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGATCAT
* * * * *
1579543 TACTAGAACCCATATTTGTCTCATTTGAAGCATGAACATAGACTTTATAAAAATTAGTGCGAAAA
194 TACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAAA
* * *
1579608 AAGCCTTTTTTGCGAAACCAAGGCATCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGG
259 AAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTAT-CCTAATGAGAAGACTATGTTTATGG
*** * * * *
1579672 TGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTAT-TGTTATCTTATTTAAGAGATAAT
323 TGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATGT-TTGTCTTATTTAAGAGACAAA
* ** * * * * * *
1579736 CTTTGATTCAATCAAAAACCGTGAAAAGAAAAGCTTTTCCTACAACACTAGAGCATCAATGTCAT
387 CTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* * * * *
1579801 GTATCCTAATGAAGGGACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGTGACTGTTATGAGA
452 GTATCCTAATGAAGGGAATATGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTGTTACGAGA
* * * * * *
1579866 ATTGATGCTAGTTTTTTTTAAGGGATAAACTTTGATTTAAATTAAAAAAGGGCAAAGAAAAGATT
516 ATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATT
* * * *
1579931 TCCATGCAGAAA-AAAAACATCAATATCATTTACCCTAA-GAAGGAGAATATGTTTATAGTGCCT
581 TTCATGCA-AAAGAAAATCATCAATATCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCT
* *
1579994 AATCACAAAATGAATGAAGATCATTACTAGAATCTATGTTTGTC-CAATTTGAGGCACGGACTTA
644 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTC-ATTTGAGGCACGAACTTA
* ** * * ** *
1580058 GACTTTACAAAAATTGGTGGTAAAAAGGGTTTTCTTGCGAAGCTAATCCATTAATATCGA-GTAA
708 GACTTTACAAAAATTGGTGGGAAAAA-GCCTTTCTTGCGAAACCAAAGCATCAATATC-ATGT-A
* *
1580122 T-CTAATGAGAAGACTATATTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATT
770 TCCTAATGAAAAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATGACTATT
* * * * * *
1580186 ATTGTTTGTCCTATTTAAAAGACAAATTTTGATTCGATC-AAAACAGGTGCACAGAACAGCTTTT
834 ATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAAC-GATGGAAAGAAAAGCTTTT
* * ** * *
1580250 CTTGCAACACCAAGGCATCAATAACATGTATCCTAATAAAGGGAAAATGT
898 CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * * * *
1580300 TTTTGGTTCCCAAT-TTGTTAAAGAATGGTGATTGCTATGAGAATCAATCCATGT-TTGATTTAA
1 TTTTGGTTCCCAATCTT-TTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTT-ATTTAA
* ** * * *
1580363 GGGATAAACTTTGACTTTAATTAAAATAGGGCAAAGAATAGATTTCCATGCAAAAGAAAATCATA
64 GGGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATC
* * *
1580428 AATATCATTTATTCTAATGAGAAGAAGGTGTTTATAGTGCCTAATCACGA-AATGAATGAAGATC
129 AATATCATTTATCCTAATGAGGAGAA-TTGTTTATAGTGCCTAATCAC-ATAATGAATGAAGATC
* ** * * ** *
1580492 ATTACTGGAACCCATGTTTGTCTTGTTCGAGGTACGAACTTAGACTTT-TCAAAAATTCTTGGGA
192 ATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAATTGGTGCGA
* * *
1580556 AAAAAGCCTTTCTTGCGAAACCAAATCATCAATAT-GATGTATCTTAAGGAGAAGACTATGTTTA
256 AAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCG-TGTATCCTAATGAGAAGACTATGTTTA
** * * * *
1580620 TGGTGCCTAATGGTGAAAATGAACGGGGATTAGTATGAGTATTCATGTTTGTCTTAATTAAGAGG
320 TGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTATGACTATT-ATGTTTGTCTTATTTAAGAGA
* * * * *
1580685 CAAACTTTGGTTCTATCAAAAATGGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAGCATTAATG
383 CAAACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATG
* * * ** *
1580750 TCATGTATCATAATAAAGGGAATGTGTTTTTGGTTCTCAATCTTGAAAAGAATGGAGACTGTTAT
448 TCATGTATCCTAATGAAGGGAATATGTTTTTGGTTC-CAATCTTTTAAAGAATGGAGACTGTTAC
** * *
1580815 GAGAATCAATGCTTGTCTTATTTAAGGGATGAACTTTGATTTCAAGTAAAATAGGGCAAAGAAAA
512 GAGAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAA
* ** *
1580880 GATTTTAATGCAAAAGAAAATTGTCAATATCGTTTATCCTAATGAGGAGAATGTGTTTATAGTGC
577 GATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGC
* * * * *
1580945 CTAATCACAAAATGAGTGAAGATCACT-CATAGAATCCACGTTTATCTCATTTGAGGCATGAACT
642 CTAATCACAAAATGAATGAAGATCATTAC-TAGAATCCATGTTTGTCTCATTTGAGGCACGAACT
* * * * * *
1581009 TAGAATTTAAAAAAATTGGTGGGAAAATGCCTTT-TTGCGAAAGCAAAACATCAATATCGTGTAT
706 TAGACTTTACAAAAATTGGTGGGAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTAT
* * * * ** *
1581073 CCTAATGAAAAGACTATGTTTATGG-CCCCAATCATGAAAA-ATTGGAGATTAT-TACAACAATC
771 CCTAATGAAAAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATT-TGTATGACTAT-
* ** * * * * * * * * * *
1581135 CA-AATTCGTGTTATTTGAAGGACGAACTTTGATTCTATCGAAAATGATGAAAAGAAAAGGTTCT
833 TATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACGATGGAAAGAAAAGCTT-T
* * * * * * * * * *
1581199 TTTATG-G-CACCAAAGCCTTAATGTCTTGTCTCCTAAAGATGGTAACACGT
897 TCT-TGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* ** ** ** * * * * *
1581249 TTTTGCTTCCCAATC-TCGAAATGAATGAAGACAATTACA-AGAATCTAT-ATTGGTGTCATTTG
1 TTTTGGTTCCCAATCTTTTAAA-GAATGGTGACTGTTA-AGAGAATCAATGCTT-GTCTTATTTA
* * * * * * * * ** **
1581311 GGGGATGAACTTTGATTTTAAGGAAAAT-GGGTCAAAGAACA-CTTTTCTTG-AGACATCAAAGC
63 AGGGATAAACTTTGATTTTAAGAAAAATAGGG-CAAAGAAAAGATTTCCATGCA-AAAGAAAATT
* * * ** * * * * * * * * *
1581373 AACAATATCGTGTATTGTAGTGGGGAAAACATATTTGTAGTGCCTAAT--CGTTA-GCAGATGGA
126 ATCAATATCATTTATCCTAATGAGGAGAA-TTGTTTATAGTGCCTAATCACATAATG-A-ATGAA
** * * * * * * **
1581435 GATGGTTA-TGACAACCCATGGTGGTCGCCTTTGAAGG-ATGAACATT-GA-TTCTATAAAAAAC
188 GATCATTACT-AGAACCCATGTTTGTCTCATTTG-AGGCACGAAC-TTAGACTT-TATAAAAATT
* * * * * ** * * *
1581496 GGTG-GAAAGAAAAGCTTTTTTTG-AAACACCAACGCATCAATGTTATGCATCCTAACGA-AGTG
249 GGTGCG-AA-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCGTGTATCCTAATGAGA-AG
* * * * * * * * * * ** * *
1581558 AATGTGTTTTTAGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGTCTTA
310 ACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTAT-TATGTTTGTCTTA
* ** * ** * * * * * * **
1581623 TTTAAGGGATGAACTTTTATTTTATGAAAAATAGG-GCAAAGAAAAG-ATTTCAATGCAAAAGAA
374 TTTAAGAGACAAACTTTGATTCGATCAAAAAT-GGTGGAAAGAAAAGCTTTTC-TTGCGACACCA
* * * * * * * * * ** * ** ***
1581686 AATCATCAGTATCATTTACCCTATTGAAGAGAATGTGTTTATAATGCTGGATC-ACAAAATGAAT
437 AAGCATCAATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTC-CAATCTTTTAAA-GAAT
** * * *** * * * * *
1581750 TAAGA-TCATTATTG-GAATCCTTGTTTGTCTCATTT-AGAGCATAAACTTAGACTTTACA--AA
500 GGAGACT-GTTA-CGAGAATTGATGCTTGTCTTATTTAAG-GGATAAACTTTGATTTTA-AGTAA
* * * * ** * ** ** * * * * * *
1581810 AATTGTTGG--TACAAATGCCTTTCTTGTGAAACCAAACCATCAATATCGTGTATCATTATGAGA
561 AATAG--GGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGG
* * * ** * * * **
1581873 AGACTATGTTTAT-GGGCCTTAATCTTGAAAA-GTAT-AGGGATTAGTATGACTATTA-CC--GT
624 AGAATGTGTTTATAGTGCC-TAATC-ACAAAATGAATGA-AGATCA-T-T-ACTAGAATCCATGT
* * * * * **** * *
1581932 TTGTCTTATTTGATAG-ACAAACTTTGA-TTCGATCAAAAA-CCAAGGAAAGAAATGCTTTTCTT
683 TTGTCTCATTTGA-GGCACGAACTTAGACTT-TA-CAAAAATTGGTGGGAA-AAA-GCCTTTCTT
* * * ** * * * *
1581994 GCGACACCAAAGCATCAATGTCATGTATCCTAACGAAGGGAATATGTTTTTGGTACCTAATCTTT
743 GCGAAACCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCTAATC-TG
* * * ** * ** * * * * ** * *
1582059 TAAGGAATGGTGACAAT-TACGAGAATCGATT-CTTCTCTTATTTTAGGGATAAACTTTGATTTT
807 AAAAGAATGGGGA-TTTGTATGACTAT-TATTGTTTGTCTTATTTAAAAGACAAACTTTGA-TTC
* * * ** * * * * * ** * * *
1582122 AATTAAAATA--A-GGTAAAAAAAATATTTCCATCCAAAAGAAAATCATCAATATCATTTATCCT
869 GATCAAAA-ACGATGG-AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCT
*
1582184 AATG-AGAAGAATATGT
932 AATGAAG-GGAATATGT
* * * * *** ** * *** * * * *
1582200 TTATAGTGCCTAATC-ACAAAATGAATGAAGA-TCATTGCTAGAATCCATGTTTGTCTCATTTGA
1 TTTTGGTTCCCAATCTTTTAAA-GAATGGTGACT-GTTAAGAGAATCAATGCTTGTCTTATTTAA
* ** * * * * * * * * ** * ** ** **
1582263 GGCACGAACTTAGACTTT-ACAAAAGTTGGTGGAAA-AGATGCCTTCCTTGTGAAACCAAACCAT
64 GGGATAAACTTTGATTTTAAGAAAAATAGG-GCAAAGAAAAGATTTCCATGCAAAAGAAAATTAT
* * * ** * **
1582326 CAATATCATGTATCCTAATGA-GAAAATTATGTTTATGGTGCCTAATCTTGA-AAAGAATGGGGA
128 CAATATCATTTATCCTAATGAGGAGAA-T-TGTTTATAGTGCCTAATC-ACATAATGAATGAAGA
* ** * * * * *
1582389 T--TT-GTATG-ACTTTAATGTTTGTCTTA-TTGCAAAG-ACAAACTTTGA-TTCGATCAAAAA-
190 TCATTACTA-GAAC--CCATGTTTGTCTCATTTG--AGGCACGAACTTAGACTT-TAT-AAAAAT
** ** * * * * * ***
1582446 CAGTGAAAAAAAAGCTTTTCTTGCGACACTATAGCATCAATGTCAACTATCCTAA--AGAAGGGA
248 TGGTGCGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAA--GA
** * * * *** ** * * ** * * *
1582509 AAATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTTACT-GTTGTGAGAATCGAGGCTTGTCTTA
311 CTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAG-TATGACTAT-TATGTTTGTCTTA
* * * * ** * * * * **
1582573 ATGAAGGGATAAACTTTGATTTTAAT-TAAAATAGG-GCAAAGAAAAG-TTTTCTATGCAAAAGA
374 TTTAAGAGACAAACTTTGA-TTCGATCAAAAAT-GGTGGAAAGAAAAGCTTTTCT-TGCGACACC
* ** * * * * * * ***
1582635 AAATCATCAAAATCATTTATCCTGATGAGGGGAATGTGTTTATGGTGCCAAATC-ACAAAATGAA
436 AAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCC-AATCTTTTAAA-GAA
* * * * * * * * * * * *
1582699 TGAAGA-TCATTAC-AAAATCCG-TGTTTGTCTCATTTGAGGCATGAACATAGACTTTACA--AA
499 TGGAGACT-GTTACGAGAAT-TGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTA-AGTAA
* * * * * ** * * * * * * * *
1582759 AAT-TGG-TAGGAAAAGAGCCTTTCTTGCAATGGCAAAGCGTCAATATGATGTATCGTAAAGAGA
561 AATAGGGCAAAGAAAAGA--TTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGG
* * * * * ** * **
1582822 AGACTATGCTTATGGTGCATAATC-CTGAAAA-GAATGGGGAT--TT-GTATGACTATTAATGTT
624 AGAATGTGTTTATAGTGCCTAATCAC--AAAATGAATGAAGATCATTACTA-GA--ATCCATGTT
* * * * * ** * *
1582882 TGTCTTATTTAAGAG-ACAAACACT-GA-TTCAATCAAAAA-CAGTGGAATGAAAAGCTTTTCTT
684 TGTCTCATTTGAG-GCACGAAC-TTAGACTT-TA-CAAAAATTGGTGGGA--AAAAGCCTTTCTT
* * * * * *** * * * * * *
1582943 GCGACACCAAAGGATCCATGTTATGTAT-CTAATGACGGGATTGTGTTTTTGGTTCCCAATCTTT
743 GCGAAACCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCTAATC-TG
* * **** * ** * * * *** ** ** *
1583007 TAAATAATGGGGACGAATACGAGAATCAATGCTTGTCTTATTTAGGGGATGAACTTTGATTTTAA
807 AAAAGAATGGGGATTTGTATGACTATTATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGAT
* * * * * * * ** ** *
1583072 GAAAAA-TAGGGCAAAGAAAAGATTTCCATGC-ATAAGAAAATTATCAATATCAT-TATCCTAAT
872 CAAAAACGATGG-AAAGAAAAGCTTTTCTTGCGA-CACCAAAGCATCAATGTCATGTATCCTAAT
* *
1583134 G-TGGAGAATGTGT
935 GAAGG-GAATATGT
* * * * *** * *** * ** * * ** *
1583147 TTATAGTGCCTAATCACATAATGAATAAAGA-TCATTACTAGAACCCATATTTGTCTCATTTGAA
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACT-GTTAAGAGAATCAATGCTTGTCTTATTT-AA
* * * * * * * * * ** * ** ***
1583211 -GCATGAACATAGACTTTATA-AAAATTAGTGCGAA-AAAAGCCTTT-TTTGCGAAACCAAGGCA
64 GGGATAAACTTTGATTTTA-AGAAAAATAGGGCAAAGAAAAG-ATTTCCATGCAAAAGAAAATTA
* * * * * *
1583272 TCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGGTGCCTAAT--C-T--TGAAAAGAAA
127 TCAATATCATTTAT-CCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATG-AATGAAG
* * * * * * * *
1583331 ATGTATTAGTATG-A-CTAT-TATTGTTATCTTATTTAAGAG-A-TAATCTTTGA-TTCAATCAA
189 AT-CATTACTA-GAACCCATGT-TTG---TCTCATTTGAG-GCACGAA-CTTAGACTT-TAT-AA
** ** * * * * * * *
1583390 AAA-CCGTGAAAAGAAAAGCTTTTCCTAC-AACACTAGAGCATCAATGTCATGTATCCTAATGA-
244 AAATTGGTGCGAA-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCGTGTATCCTAATGAG
* * * * * ** * * * ** * *
1583452 AGGGACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGTGACT-GTTATGAGAATTGATGCTAG
307 A-AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAG-TATGACTATT-ATGTTTG
* * * * ** * * * * * *
1583516 TTTTTTTTAAGGGATAAACTTTGATTTAAATTAAAAAAGG-GCAAAGAAAAGATTTCCATGCAGA
369 TCTTATTTAAGAGACAAACTTTGA-TTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGC-GA
** ** * * * * * * ***
1583580 -AGAAAATTATCAATATCAT-TATCCTAATG-TGGAGAATGTGTTTATAGTGCCTAATCACATAA
432 CACCAAAGCATCAATGTCATGTATCCTAATGAAGG-GAATATGTTTTTGGTTCC-AATCTTTTAA
* ** * * *** ** * * * * *
1583642 TGAATAAAGA-TCATTACTAGAACCCATATTTGTCTCATTTGAA-GCATGAACATAGACTTTATA
495 AGAATGGAGACT-GTTACGAGAATTGATGCTTGTCTTATTT-AAGGGATAAACTTTGA-TTT-TA
* * * * * * ** ** *
1583705 A--AAATTAGTGCGAA-AAAAGCCTTTT-TTGCGAAACCAAGGCATCAATATCATGTATCCCT-A
556 AGTAAAATAGGGCAAAGAAAAG-ATTTTCATGCAAAAGAAAATCATCAATATCATTTAT-CCTAA
* * * * ** * *
1583765 TGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAA-GAA--AATG-T-ATTAGTATGACTAT-T
619 TGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAA-GATCATTACTA-GA--ATCC
* * * * * * ** ** *
1583824 AT-TGTTATCTTATTTAAGAG-A-TAATCTTTGA-TTCAATCAAAAA-CCGTGAAAAGAAAAGCT
679 ATGT-TTGTCTCATTTGAG-GCACGAA-CTTAGACTT-TA-CAAAAATTGGTG-GGA-AAAAGCC
* * * * * ** * * * *
1583884 TTTCCTAC-AACACTAGAGCATCAATGTCATGTATCCTAATGAAGGGACTATGTTTTTTGTTCCC
737 TTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCT
** * * * ** * * * * ** *
1583948 AATCTTTTAAGGAATGGTGA-CTGTTATGAGAATTGA-TGCTAGTTTTTTTTAAGGGATAAACTT
801 AATC-TGAAAAGAATGGGGATTTG-TATGACTATT-ATTGTTTGTCTTATTTAAAAGACAAACTT
** * * * * * ** * *
1584011 TGATTTAAATTAAAAA--AGGGCAAAGAAAAGATTTCCATGCAGA-AAAAAAACATCAATATCAT
863 TGA-TTCGATCAAAAACGATGG-AAAGAAAAGCTTTTCTTGC-GACACCAAAGCATCAATGTCAT
* *
1584073 TTACCCTAA-GAAGGAGAATATGT
925 GTATCCTAATGAAGG-GAATATGT
* * * * *** ** * ** * * ** *
1584096 TTATAGTGCCTAATC-ACAAAATGAATGAAGA-TCATTACTAGAATCTATGTTTGTCCAATTTGA
1 TTTTGGTTCCCAATCTTTTAAA-GAATGGTGACT-GTTAAGAGAATCAATGCTTGTCTTATTTAA
* *** * * * * ** * * * * * ** *
1584159 GGCACGGACTTAGACTTT-ACAAAAATTGGTGGTAA-AAAGGGTTTTCTTGC-GAAGCTAATCCA
64 GGGATAAACTTTGATTTTAAGAAAAATAGG-GCAAAGAAAAGATTTCCATGCAAAAGAAAAT-TA
* * * * * * * ** * **
1584221 TTAATATCGAGTAAT-CTAATGAGAAGACTATATTTATGGTGCCTAATCTTGA-AAAGAATGGGG
127 TCAATATC-ATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATC-ACATAATGAATGAAG
* ** * * * * * * *
1584284 AT--TT-GTATG-ACTATTATTGTTTGTC-CTATTTAAAAG-ACAAATTTTGA-TTCGATCAAAA
189 ATCATTACTA-GAAC--CCA-TGTTTGTCTC-ATTT-GAGGCACGAACTTAGACTT-TATAAAAA
** * * * * *
1584342 CAGGTGC-ACAGAACAGCTTTTCTTGC-AACACCAAGGCATCAATAACATGTATCCTAAT-A-AA
247 TTGGTGCGA-A-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCGTGTATCCTAATGAGAA
** * * * * * ** * ***
1584403 GGGAAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAATGGTGATT-GCTATGAGAATCAATCCATG
309 --GACTATGTTTATGGTGCCTAATCTTG-AAAAGAATGGGGATTAG-TATGACTAT-TATGTTTG
* * ** * * * * * * *
1584466 T-TTGATTTAAGGGATAAACTTTGACTTTAAT-TAAAATAGG-GCAAAGAATAGATTTCCATGCA
369 TCTT-ATTTAAGAGACAAACTTTGA-TTCGATCAAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCG
* ** * * * * * * ** * * * ***
1584528 AAAGAAAATCATAAATATCATTTATTCTAATG-AGAAGAAGGTGTTTATAGTGCCTAATC-ACGA
431 ACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GGAATATGTTTTTGGTTCC-AATCTTTTA
* * *** * * ** * ** *
1584591 AATGAATGAAGA-TCATTACTG-GAACCCATGTTTGTCTTGTTCGAGGTACGAACTTAGACTTTT
494 AA-GAATGGAGACT-GTTAC-GAGAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGA-TTTT
* * ** * * ** * * *
1584654 CAA--AAATTCTTGGG--AA-AAAAGCCTTTCTTGCGAAACCAAATCATCAATATGATGTATCTT
555 -AAGTAAA--ATAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCT
* * * * * *** * ** * * * *
1584714 AAGGAGAAGACTATGTTTATGGTGCCTAATGGTGAAAATGAACGGGGATTAGTA-TGAGTATTCA
617 AATGAGGAGAATGTGTTTATAGTGCCTAAT-CACAAAATGAATGAAGATCATTACT-AGAATCCA
* * * * * **
1584778 TGTTTGTCTTAATTAAGAGGCA--AACTTTG-GTTCTATCAAAAA-TGGTGGAAAGGAAAGTTTT
680 TGTTTGTC-TCATT-TGAGGCACGAACTTAGACTT-TA-CAAAAATTGGTGGGAA--AAAGCCTT
* * * * * * * * *
1584839 TCTTGCGACACCAAAGCATTAATGTCATGTATCATAAT-AAAGGGAATGTGTTTTTGGT-TCTCA
739 TCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAA-AGACTATGTTTATGGTGCCT-A
* * ** * * * ** **
1584902 ATCTTGAAAAGAATGGAGA-CTGTTATGAGAATCAATGCTTGTCTTATTTAAGGGATGAACTTTG
802 ATC-TGAAAAGAATGGGGATTTG-TATGACTATTATTGTTTGTCTTATTTAAAAGACAAACTTTG
* * ** * * ** *** * * *
1584966 ATTTCAAGT-AAAATA-G--GGCAAAGAAAAGATTTTAATGCAAAAGAAAATTGTCAATATCGTT
865 A-TTCGA-TCAAAA-ACGATGG-AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
*
1585027 TATCCTAATG-AGGAGAATGTGT
926 TATCCTAATGAAGG-GAATATGT
* * * * *** * ** ** * * * * * * * *
1585049 TTATAGTGCCTAATC-ACAAAATGAGTGAAGA-TCACTCATAGAATCCACGTTTATCTCATTTGA
1 TTTTGGTTCCCAATCTTTTAAA-GAATGGTGACT-GTTAAGAGAATCAATGCTTGTCTTATTTAA
* * * * * * * * *
1585112 GGCATGAACTTAGAATTTAA-AAAAATTGGTG---GGAAAATGCCTTT--TTGCGAAAGCAAAA-
64 GGGATAAACTTTGATTTTAAGAAAAATAGG-GCAAAGAAAA-G-ATTTCCATGCAAAAG-AAAAT
* * * ** * * *
1585170 CATCAATATCGTGTATCCTAATGAAAAGACTATGTTTAT-G-GCCCCAAT--CATGAA-AAATTG
125 TATCAATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTG-CCTAATCACAT-AATGAA-TG
* * * * * ** * * * * *
1585230 GAGATTATTACAACAATCCAAATTCGTGTTATTTGAAGG-ACGAACTTTGA-TTCTATCGAAAA-
186 AAGATCATTACTAGAACCCATGTTTGTCTCATTTG-AGGCACGAACTTAGACTT-TAT-AAAAAT
* ** * * * * * * * *
1585292 TGATGAAAAGAAAAGGTTCTTT-TATG-G-CACCAAAGCCTTAATGTCTTGTCTCCTAAAGATGG
248 TGGTGCGAA-AAAA-G-CCTTTCT-TGCGAAACCAAAGCATCAATATCGTGTATCCTAATGA--G
* * * * * * * * ** ** * ** ** * * *
1585354 TA-AC-ACGTTTTTGCTTCCCAATCTCGAAATGAATGAAGACAATTACAAGAATCTATATTGGTG
307 AAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTAT-TATGTTTGTC
* ** * ** ** *** * * * *
1585417 TCATTTGGGGGATGAACTTTGATTTTAAGGAAAATGG-GTCAAAGAACA-CTTTTCTTGAGACAT
371 TTATTTAAGAGACAAACTTTGATTCGATCAAAAATGGTG-GAAAGAAAAGCTTTTCTTGCGACAC
* * * ** * * * * * * * *
1585480 CAAAGCAACAATATCGTGTATTGTAGTG--GGGAAAACATATTTGTAGTGCCTAATC-GTTAGCA
435 CAAAGCATCAATGTCATGTATCCTAATGAAGGG--AATATGTTTTTGGTTCC-AATCTTTTA-AA
* * *** * * *** * * *
1585542 G-ATGGAGA-TGGTTATGACAACCCATGGTGGTCGCCTTTGAA-GGATGAACATTGATTCT-A-T
496 GAATGGAGACT-GTTACGAGAATTGATGCTTGTCTTATTT-AAGGGATAAACTTTGATTTTAAGT
* * * ** ** ** * * ** *
1585602 AAAAAACGGTGGAAAGAAAAGCTTTTTTTG-AAACACCAACGCATCAATGTTATGCATCCTAACG
559 AAAATA-GG-GCAAAGAAAAGATTTTCATGCAAA-AGAAAATCATCAATATCATTTATCCTAATG
* * * * * ** * * * *
1585666 AAGTGAATGTGTTTTTAGTTCCCAATCTTGAAAA-GAATGGAGA-CTATTACGAGAATCAATGCT
621 AGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATC-ATTACTAGAATCCATGTT
* * * * ** * * ** * *
1585729 TGTCTTATTTAAGGGATGAACTTTTA-TTTATGAAAAATAGG-GCAAAGAAAAG-ATTTCAATGC
684 TGTCTCATTTGAGGCACGAACTTAGACTTTA-CAAAAATTGGTG-GGA-AAAAGCCTTTC-TTGC
* ** * * * * * * * * ** * **
1585791 AAAAGAAAATCATCAGTATCATTTACCCTATTGAAGAGAATGTGTTTATAATG-CTGGATCACAA
745 GAAACCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCT-AATCTGAA
*** * ** * * * *
1585855 AATGAATTAAGATCAT-TATTGGA--ATCCTTGTTTGTCTCATTT-AGAGCATAAACTTAGACTT
809 AA-GAATGGGGAT-TTGTA-T-GACTATTATTGTTTGTCTTATTTAAAAG-ACAAACTTTGA-TT
* * * * * * * * * * * * *
1585916 -TA-CAAAAATTGTTGG-TACAAATGCCTTTCTTGTGAAACCAAACCATCAATATCGTGTATCAT
868 CGATCAAAAA-CGATGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCT
* * *
1585978 TATG-AGAAGACTATGT
932 AATGAAG-GGAATATGT
* * * ** * * * ** * ** * *
1585994 TTATGG-GCCTTAATCTTGAAAAGTATAGG-GATTAG-TATGACTATTACCGTTTGTCTTATTTG
1 TTTTGGTTCC-CAATCTTTTAAAGAAT-GGTGACT-GTTAAGAGAATCAATGCTTGTCTTATTTA
** * ** ** * * * * * * * * ** **
1586056 ATAGACAAACTTTGATTCGATCAAAAACCAAGG-AAAGAAATGCTTTTCTTGCGACACCAAAGCA
63 AGGGATAAACTTTGATTTTAAGAAAAA-TAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTA
* * * * * * *** * **
1586120 TCAATGTCATGTATCCTAACGAAGG-GAATATGTTTTTGGTACCTAATCTTTTAAGGAATGGTGA
127 TCAATATCATTTATCCTAATG-AGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGA
* * * * * * * ** * * * *
1586184 -CAATTACGAGAATCGAT-TCTTCTCTTATTTTAGGGATAAACTTTGATTTTAATTAAAATAAGG
190 TC-ATTACTAGAACCCATGT-TTGTCTCATTTGAGGCACGAACTTAGACTTT-ATAAAAAT-TGG
* *** * * * ** * * * *
1586247 T--AAAAAAAATATTTCCATCCAAAAGAAAATCATCAATATCATTTATCCTAATGAGAAGAATAT
251 TGCGAAAAAAGCCTTT-CTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTAT
* ** ** * * *
1586310 GTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCA-T-TG-CTAGAATCCATGTTTGTCTCAT
315 GTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTATGACT---AT-TATGTTTGTCTTAT
* * * * * * * * * * *
1586371 TTGAG-GCACGAACTTAGACTT-TA-CAAAAGTTGGTGGAAA-AGATGCCTTCCTTGTGAAACCA
375 TTAAGAG-ACAAACTTTGA-TTCGATCAAAA-ATGGTGGAAAGAAAAGCTTTTCTTGCGACACCA
* * ** * * **
1586432 AACCATCAATATCATGTATCCTAATG-AGAAAATTATGTTTATGGTGCCTAATCTTGAAAAGAAT
437 AAGCATCAATGTCATGTATCCTAATGAAGGGAA-TATGTTTTTGGTTCC-AATCTTTTAAAGAAT
* * * ** * * * * * ** ***
1586496 GGGGA-TTTGTATGA-CTTTAATGTTTGTCTTATTGCAA-AGACAAACTTTGATTCGATCAAAAA
500 GGAGACTGT-TACGAGAATTGATGCTTGTCTTATT-TAAGGGATAAACTTTGATTTTAAGTAAAA
* * * * * * * ** * * * ** * *
1586558 CAGTG-AAAAAAAAGCTTTTCTTGCGACACTATAGCATCAATGTCAACTATCCTAAAGAAGGGAA
563 TAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATG-A-GGAG
* * * **** * ** * * *
1586622 AATGT-TTT-TGGTTCCCAATCTTTTTAA-GAATG--G-TTACTGTTGTGAGAATCGAGGCTTGT
626 AATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCA-T-TACT-AGAATCCATGTTTGT
* * * ** * * * ** * *
1586681 CTTA-ATGAAGGGATAAACTTTGATTTTA-ATTAAAATAGG-GCAAAGAAAAG-TTTTCTATGCA
687 CTCATTTG-AGGCACGAACTTAGACTTTACA--AAAATTGGTG-GGA-AAAAGCCTTTCT-TGCG
** * * * * *** * * * **
1586742 AAAGAAAATCATCAAAATCATTTATCCTGATGAGGGGAATGTGTTTATGGTGCCAAATCACAAAA
746 AAACCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCTAATCTGAAAA
** * * ** *** * * * * * *
1586807 TGAATGAAGATCAT-TA-CAAAATCCGTGTTTGTCTCATTT--GAGGCATGAACATAGACTT-TA
811 -GAATGGGGAT-TTGTATGACTATTATTGTTTGTCTTATTTAAAAGACA--AACTTTGA-TTCGA
* * * * * *** * * * *
1586867 -CAAAAATTGGTAGG-AA-AAGAGCCTTTCTTGCAATGGCAAAGCGTCAATATGATGTATCGTAA
871 TCAAAAA-CGAT-GGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAA
* * * *
1586929 AG-AGAAGACTATGC
934 TGAAG-GGAATATGT
* * ** * ** * * * ** * *
1586943 TTATGGTGCATAATCCTGAAAAGAATGGGGA-TTTGTATGACTATTAATGTTTGTCTTATTTAAG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGT-TAAGAGAATCAATGCTTGTCTTATTTAAG
* * ** * * * * * * * * ** **
1587007 AGACAAACACTGA-TTCAATCAAAAACAGTGG-AATGAAAAGCTTT-CTTGCGACACCAAAGGAT
65 GGATAAACTTTGATTTTAA-GAAAAATAG-GGCAAAGAAAAGATTTCCATGCAAAAGAAAATTAT
* * * * * * * * * *** **
1587069 CCATGTTATGTAT-CTAATGACGG-GATTGTGTTTTTGGTTCCCAATCTTTTAAAT-AATGGGGA
128 CAATATCATTTATCCTAATGA-GGAGAAT-TGTTTATAGTGCCTAATCACAT-AATGAATGAAGA
* * * * * * * * * * * *
1587131 -CGAATACGAGAATCAATGCTTGTCTTATTT-AGGGGATGAACTTTGATTTTAAGAAAAATAGG-
190 TC-ATTACTAGAACCCATGTTTGTCTCATTTGA-GGCACGAACTTAGACTTT-ATAAAAATTGGT
* * * ** ** * * * * *
1587193 GCAAAGAAAAG-ATTTCCATGC-ATAAGAAAATTATCAATATCAT-TATCCTAATGTGGAGAATG
252 GCGAA-AAAAGCCTTT-CTTGCGA-AACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTA
* ** * *** * * * *
1587255 TGTTTATAGTGCCTAATC-ACATAATGAATAAAGATCATTACTAGAACCCA-TA--TTTGTCTCA
314 TGTTTATGGTGCCTAATCTTGA-AAAGAATGGGGATTAGTA-T-G-A-CTATTATGTTTGTCTTA
* * * * * *
1587316 TTTGA-AG-CATGAACATAGACTT-TAT-AAAAATTAGTGCG-AA-AAAAGCCTTTT-TTGCGAA
374 TTTAAGAGACA--AACTTTGA-TTCGATCAAAAA-TGGTG-GAAAGAAAAG-CTTTTCTTGCGAC
* * * * * * **
1587374 ACCAAGGCATCAATATCATGTATCCCT-ATG-AGAAGACTATGTTTATGGTGCCTAATCTTGAAA
433 ACCAAAGCATCAATGTCATGTAT-CCTAATGAAG-GGAATATGTTTTTGGTTCC-AATCTTTTAA
* * * ** * * * *
1587437 AGAAAAT-G-TATTAG-TATGACTATT-ATTG-TTATCTTATTTAAGAGATAATCTTTGA-TTCA
495 AG--AATGGAGACT-GTTACGAGAATTGA-TGCTTGTCTTATTTAAGGGATAAACTTTGATTTTA
* * * * * * ** * * * *
1587496 A-TCAAAA-ACCGTGAAAAGAAAAGCTTTTCCTACAACACTAGAGCATCAATGTCATGTATCCTA
556 AGT-AAAATA--GGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTA
* * * * * * **** * ** * **
1587559 ATGAAGG-GACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGTGA-CTGTTA-TGAGAATTGA
618 ATG-AGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC-ATTACT-AGAATCCA
* * * ** * * ** * * ** ** *
1587621 TGCTAGTTTTTTTTAAGGGATAAACTTTGA-TTTAAATTAAAAAAGG-GCAAGAAAAG-ATTTCC
680 TGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACA--AAAATTGGTGGGA-AAAAGCCTTT-C
* * * * * * * *
1587683 ATGCAGAAA-AAAATCATCAATATCATTTACCCTAA-GAAGGAGAATATGTTTATAGTGCCTAAT
741 TTGC-GAAACCAAAGCATCAATATCATGTATCCTAATGAA-AAGACTATGTTTATGGTGCCTAAT
** ** * * * * **
1587746 CACAAAATGAATGAAGATCAT-TACTAGA--ATCTA-TGTTTGTCTAATTT-GAGGCACGGACTT
804 CTGAAAA-GAATGGGGAT-TTGTA-T-GACTAT-TATTGTTTGTCTTATTTAAAAG-ACAAACTT
* * * * * * * * ** * *
1587806 AGACTT-TA-CAAAAATTGGTGG-TA-AAAGGGTTTTCTTGCGA-AGCTAATCCATTAATATCGA
863 TGA-TTCGATCAAAAA-CGATGGAAAGAAAAGCTTTTCTTGCGACA-CCAAAGCATCAATGTC-A
* * *
1587866 -GTAAT-CTAATG-AGAAGACTATAT
924 TGT-ATCCTAATGAAG-GGAATATGT
* * * ** * * * ** * * * * *
1587889 TTATGGTGCCTAATCTTGAAAAGAATGGGGA-TTTGTATGACTATTATTGTTTGTCCTATTTAAA
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGT-TAAGAGAATCAATGCTTGTCTTATTTAAG
* * * * * * * * * ** ***
1587953 AGACAAATTTTGA--TT-AGATCAAAACAGGTGCACAGAAAAGCTTTTCTTGCAACACCAAGGCA
65 GGATAAACTTTGATTTTAAGA--AAAATAGG-GCAAAGAAAAGATTTCCATGCAAAAGAAAATTA
* * * * * * * * **** * **
1588015 TCAATAACATGTATCCTAATAAAGG-GAAAATGTTTTTGGTTCCCAATTTGTTAAAGAATGGTGA
127 TCAATATCATTTATCCTAAT-GAGGAG-AATTGTTTATAGTGCCTAATCACATAATGAATGAAGA
*** * * *** * * * * ** * * * *
1588079 TTGCTA-TAAGAATCAATCCATGTTTGATTTAAGGGATAAACTTTGATTTTAATTAAAATAGG-G
190 TCATTACT-AGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTT-ATAAAAATTGGTG
* ** * ** * * * * * *
1588142 C-AAATAATAG-ATTTCCAAGCAAAAGAAAATCATAAATATCATTTATCCTAATGAGAAGAATGT
253 CGAAA-AA-AGCCTTT-CTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTAT
* ** * ** * * ** * *
1588205 GTTTATAGTGCCTAATCACGAAATGAATGAAGATCATTACTGGA--ACCCATGTTTGTCTTGTTC
315 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTA-T-GACTA-TTATGTTTGTCTTATTT
* * * * ** * *
1588268 GAG-GTACGAACTTAGACTT--TTCAAAAATTCTTGGGAAA-AAAAGCCTTTCTTGCGAAACCAA
377 AAGAG-ACAAACTTTGA-TTCGATCAAAAA-TGGT-GGAAAGAAAAGCTTTTCTTGCGACACCAA
* * * * * * * * * * * ***
1588329 ATCATCAATATGATGTATCTTAA-GGAGAAGACTATGTTTATGGTGACTAATGGTGGAAAAGAAT
438 AGCATCAATGTCATGTATCCTAATGAAG-GGAATATGTTTTTGGT-TCCAAT-CTTTTAAAGAAT
* * * * * * * * * * * *
1588393 GGGGATTAG-TATGAGTATTCATGTTTGTCTTAATTAAGAGG-CAAACTCTGGTTCT-A-TCAAA
500 GGAGACT-GTTACGAGAATTGATGCTTGTCTTATTTAAG-GGATAAACTTTGATTTTAAGTAAAA
* * * * * * ** * * * * *
1588454 TATGGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCATAATAAAGG-
563 TA-GG-GCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAAT-GAGGA
* * * * ** * * *
1588518 GAATGTGTTTTTGGTTCTTAATCTTGAAAA-GAATG--GATACTGTTACGAGAATCAAT-TCTTG
625 GAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGAT-C-ATTACTAGAATCCATGT-TTG
* * * * * * ** ** ** *
1588579 TCTTATTTAAGGGATGAACTTTGA-TTT-CAAGTAAAATAGG-GCAAACAAAAGATTTTAATGCA
686 TCTCATTTGAGGCACGAACTTAGACTTTAC-A--AAAATTGGTG-GGA-AAAAGCCTTTCTTGCG
** * * * ** * * * **
1588641 AAAGAAAAATCATCAATATCGTTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAA
746 AAA-CCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCTAATCTGAAA
* ** * ** * * * * * * *
1588706 ATGAGTGAAGATCATT-CATAGA--ACCCA-CGTTTATCTCATTT-GAGGCACGAACTTAGACTT
810 A-GAATGGGGAT--TTGTAT-GACTA-TTATTGTTTGTCTTATTTAAAAG-ACAAACTTTGA-TT
* * * * * * ** * * *
1588766 -TA-CAAAAATTGGTGG---GAAAATGCCTTTCTTGCAAAAGAAAAACATCAATATCGTGTATCC
868 CGATCAAAAA-CGATGGAAAGAAAA-GCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCC
* *
1588826 TAATGAAAAGGACTATGT
931 TAATG-AAGGGAATATGT
* * * * * * * * * *
1588844 TTATGG-CCCCAATC-ATGAAA-AATTGGAGATTATTACA-ACAATCCAAAT--TCGTGTTATTT
1 TTTTGGTTCCCAATCTTTTAAAGAA-TGGTGACTGTTA-AGAGAAT-C-AATGCTTGTCTTATTT
** * * * * * ** **
1588903 GAA-GGACGAACTTTGATTCTATCG-AAAAT-GATGAAAAGAAAAGGTTCTTTTATGGCACCA-A
62 -AAGGGATAAACTTTGATTTTA-AGAAAAATAG-GGCAAAGAAAA-GAT-TTCCAT-GCAAAAGA
*** * * * * * * *
1588964 AGCCT-T-AATGTC--TTGTCTCTAA-GATGGTA-ACA-CGTTT-TTGCTTCCCAATCTCGA-AA
121 AAATTATCAATATCATTTATC-CTAATGA-GG-AGA-ATTGTTTATAG-TGCCTAATCAC-ATAA
** * * * * * * * * *
1589020 TGAATGAAGAAAATTACAAGAATCTATATTGGTCTCATTTTTG-GGGATGAACTTTGATTTTA-A
180 TGAATGAAGATCATTACTAGAACCCATGTTTGTCTCA--TTTGAGGCACGAACTTAGACTTTATA
* * * * * * * * * ** *
1589083 GGAAAATGGGT-CAAAGAAAAACTTTTCTTGAGACATCAAAGCAACAATATCTTGTATTGTAGTG
243 --AAAATTGGTGCGAA-AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATG
* * * * * ** * * * ** *
1589147 GGGAGAAC-ATATTTGTAGTGCCTAATCGTT-AGCAG-ATGGAGA-TGGTTATGACAACCCATGG
305 AGAAG-ACTATGTTTATGGTGCCTAATC-TTGAAAAGAATGGGGATTAG-TATGACTA-TTATGT
*** ** * * * * *
1589208 TTGTCGCCTTTGAAG-GATGAACATTGATTCTATAAAAAACGATGGAAAGAAAAGC-TTTCTTTG
366 TTGTCTTATTT-AAGAGACAAACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTC-TTG
** * * * * * * * **
1589271 AAACACCAAAGCATCAATGTTATGCATTCTAACGAAGAGAATGTGTTTTTAGTTCCCAATCTTGA
429 CGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTT-CCAATCTTTT
* * * * * *
1589336 AAAGAATTGAGGACTATTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTTATTTTAT
493 AAAGAATGGA-GACTGTTACGAGAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAA
* * * * *
1589401 GAAAAATAGGGCAAAGAAAAGATTTTCATGTAAAAGAAAATCATCAGTATCATTTACCCTATTGA
557 GTAAAATAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGA
* ** * * *
1589466 -GAGAATGTGTTTATAATGCCGGATCACAAAATGAATTAAGATCATTACTGGAATCCTTGTTTGT
622 GGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGT
* * * * *
1589530 CTCATTT-AGAGCA-TACACTTAGACTTTACAAAAATTGCTGGTACAAATGCCTTTCTTGTGAAA
687 CTCATTTGAG-GCACGA-ACTTAGACTTTACAAAAATTGGTGGGA-AAAAGCCTTTCTTGCGAAA
* * * * *
1589593 CCAAACCATCAATATCGTGTATCATTATGAGAAGACTATGTTTATGG-GCCTTAATCTTGAAAAG
749 CCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCC-TAATC-TGAAAAG
* * * * * *
1589657 TATAGGGATTAGTATGACTATTACTGTTTGTCTTATTTGATAGACAAACTTTGATTCGATCAAAA
812 AATGGGGATTTGTATGACTATTATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAA
* ** *
1589722 ACCATGGAAAGAAATTCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAACGAAGGGA
877 ACGATGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGA
1589787 ATATG-
942 ATATGT
* * ** ** * * * *
1589792 TTTTGGTTCCTAATCTTTTAAGGAATGGTGACAATTGCGAGAATCGATTCTTCTCTTTTTTAAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
* * * * * * *
1589857 GATATAAACTTTGATTTCAATTAAAATTA-GGTAAAGAAAATATTTCCATCCAAAAGAAAATCAT
66 G--ATAAACTTTGATTTTAA-GAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTAT
* * *
1589921 CAATATCATTTATTCTAATGAGGAGAGAATATGTTTATAGTGCCTAATAACAAAATGAATGAAGA
128 CAATATCATTTATCCTAATGA-G-GAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGA
* * * * **
1589986 TCATTGCTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAGTTGGTGTT
190 TCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCG
* * * ** ** ** * *
1590051 AAAGAAA-CCCTTATTGCAAAATGAAAGGGTCAATATAATGTATCCTAATGGGATGACTATGTTT
255 AAA-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTT
* * *
1590115 ATGGTGCCTAAGCGTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTT-TTTAAAGAG
319 ATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTCTTATTT-AAGAG
* * * *
1590179 ACAAACTTTGATT-GAATAAAAAACGGAGGAAAGAAAA-CTTTTCTTGCGACACCAACGCATCAA
382 ACAAACTTTGATTCG-ATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAA
* * * *
1590242 TGTCATGTAACCTAATGAAGGGAATGTG-TTTTGGTTCCTAATTTTTTAAAAAATGGAGACTGTT
446 TGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTGTT
** * * * * * * * *
1590306 ACGAGAATCAATTCTTGCCTTGTTTAAAGGATGAACTTTGA-TTTCAGAAAAAATAGGGTAAAGA
510 ACGAGAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAG-TAAAATAGGGCAAAGA
* * *
1590370 AAAGA-TTTCTATGAAAAAGAAAATCATCAATATCATTTAACCTAATGAGGAGAAT-T-ATTATA
574 AAAGATTTTC-ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATA
* * * * * * * * *
1590432 GTGCCGAATCACATAACGTATGAAGATCATT-TTCGGAACCCATGTTTGTCTTATTTGAGGCACA
638 GTGCCTAATCACAAAATGAATGAAGATCATTACT-AGAATCCATGTTTGTCTCATTTGAGGCACG
* ** *** * * * * *
1590496 AACTTATACTTTGTAGCGATTGGTGCGAGAAAGCC-TTCTTGTGAAACCAAGGCATCAATATCGT
702 AACTTAGACTTTACAAAAATTGGTGGGAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * *
1590560 GCATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTGTGACT
767 GTATCCTAATGAAAAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATGACT
* ** * * * * *
1590625 ATTCA-TGTTTGTCTTATATATGACACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGCT
831 ATT-ATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACGATGGAAAGAAAAGCT
* * * * *
1590689 TTTCTTACGATACCAAAACATCAATGTCAAGTATCCTAATGAA-GGAATGTGT
895 TTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
** * * * * *
1590741 TTTT-GTT-CCAATCTTGAAAAGAATGGAGACTATTACGAGAATTAATGATTGTCGTTTATTTTA
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTC--TTA-TTTA
* * * *
1590804 A-GGA-AGAACTTTGATTTCAAGGAAAATAAGGCAAAGAAAAGATTTTCATGCAAAAG-AAATCT
63 AGGGATA-AACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAAT-T
* *
1590866 -TCAATATCATTTATCCTAATAAGGAGAATATGTTTATAGCGCCTAATCACATAATGAATGAAGA
126 ATCAATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGA
* * * * * *
1590930 TCATTACTAGAACCCTTGTTTGGCTCATTTGAGGCATGAACTTAGACTTTATAGAATTTGGTGGG
190 TCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCG
* * ** * * ** * *
1590995 AATAAAGCTTTTCTTATGAAACCAAGGCATCAATGTCGTGTATCCTTGTGAAAAAACTATGTTTT
255 AAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATG-TTT
* * *
1591060 ATGGTGCC---TC-CGAAAAAGAATGGGGATTAGTATGACTCTTATTGTTTGTCTTATTTAAAAG
319 ATGGTGCCTAATCTTG-AAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTCTTATTTAAGAG
* * *
1591121 ACAAACTTTAATTCGATC-AAAACGATGGAAAGAAAAGC-TTTCTTGCGACACCAAAGCATCAAT
382 ACAAACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAAT
* * * *
1591184 GTCATGTATCCTAATGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTAAAAAATGGTGGACTATT
447 GTCATGTATCCTAATGAAGGGAATATGTTTTTGGTT-CCAATCTTTTAAAGAATGG-AGACTGTT
* * * * ***
1591249 ATGAGAATCGATGCTTGTCTTCTTTAA-GAATAAACTTTGATTTTTTTTTTTAAAATAGGGCAAA
510 ACGAGAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGA---TTTTAAGTAAAATAGGGCAAA
* * * * * *
1591313 GAAAATATTTCCAAGCAAAAGAAAATCTTTAATATCA-TTATCC---TCAGGAG--T-TG---A-
572 GAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTAT
* * * *
1591367 A-TG--T-GTCACAAAATGAATGAACATCATTACTAGAATCCATGTTTGTCTCCTTTAAGGCACG
637 AGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACG
* * * * *
1591428 AACTTAGACTTTACAAACATTGGTGGTAGAAATGCCTTTC-TGTGAAACCAAACCATCAATATCA
702 AACTTAGACTTTACAAAAATTGGTGGGA-AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCA
* * * * *
1591492 TGTCTCCTAAT-AAGAAAACT-TGTTTATCGTGGCTAATCTTGAAAAGAATGAGGATTTGTATGA
766 TGTATCCTAATGAA-AAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATGA
* * * * * * * *
1591555 CTAGTAATGTTTATGTTGTTTAAGAGACCAAACTTCGATTCGATCAAAAACGGTGGAAAGAAAAG
829 CTATTATTGTTTGTCTTATTTAAAAGA-CAAACTTTGATTCGATCAAAAACGATGGAAAGAAAAG
* * * * * *
1591620 CTTTTCTTGCGACACCAAAGCATCAGTGT-AGCGTATCCTAATAAAGGAAATGTAT
893 CTTTTCTTGCGACACCAAAGCATCAATGTCA-TGTATCCTAATGAAGGGAATATGT
** * * * ** *
1591675 TTTTGGTTTGCAATCTTTTAAAGAGTGGAGGCTGTTACA-AGAATTGATTCTTGTCTTATTTAAG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTA-AGAGAATCAATGCTTGTCTTATTTAAG
* * * * *
1591739 GGGTGAACTTTGATTTTGA-AAAAATAGGGCAAAGAAAAGATTTCCACAG-AAAAGAAAATCATC
65 GGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCA-TGCAAAAGAAAATTATC
* * * *
1591802 AATATCATTTATCCTAATAAGGAGAA-CGTGTTATAGTGCCTAGTCACAAAATGAATGAAGATCA
129 AATATCATTTATCCTAATGAGGAGAATTGT-TTATAGTGCCTAATCACATAATGAATGAAGATCA
* * * * * ** * * * *
1591866 TTACTGGAACCCAT-CTTATCTCATTAGAGGCATGAACTTAGACTTTGCAGAATTTAGTGTGAAA
193 TTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAA
* * * * * * *
1591930 AAAACCTTTCTTGTGAAACCAAGGCAACAATATCATGTA-CCATTATGAGAATACTATGTTTATG
258 AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCC-TAATGAGAAGACTATGTTTATG
* *
1591994 G-GTCCTAATCTTGAAAAGTATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTGAGAGA-A
322 GTG-CCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTCTTATTTAAGAGACA
* * *
1592057 AACTTTGATTTGATCATAAAGCAT-G-GGAAAGAAAAGCTTTTCTTGTGACACCAAAGAATCAAT
385 AACTTTGATTCGATCA-AAA--ATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAAT
** * *
1592120 GTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCTAATCTTTTAGTGAATGGTGACTATTA
447 GTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTGTTA
* * * * * *
1592185 CAAGAATCGATTCTTCTCTTATTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGTAAAGAAA
511 CGAGAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAA
* * * *
1592250 AGATTTCCATGCAAAA-AAAATTTATCAATATCATTTATCCTAATGCGGAGAATATGTTTATAGT
576 AGATTTTCATGCAAAAGAAAA-TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
* * * * * *
1592314 GCCTAATCACAAAATGAATGAAGGTTATTACTAGAGTCCATGTTT-CCTCATTTGAGGCATGAAT
640 GCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAAC
* * *
1592378 TTAGACTTTACAAAAATTGGCGGGAAAAAAG-CTCTTCTTGCAAAACCAAAGCATCAATATGATG
705 TTAGACTTTACAAAAATTGGTGGG-AAAAAGCCT-TTCTTGCGAAACCAAAGCATCAATATCATG
* * * * *
1592442 TATCCTAATGAGAAGACTATGTTTATGGTGCCTAACCCTAAAAAAAATGGGGATTTGTATGGCTA
768 TATCCTAATGAAAAGACTATGTTTATGGTGCCTAA-TCTGAAAAGAATGGGGATTTGTATGACTA
* ** ** *
1592507 TTAATGTTTGTCGTT-TTTAGGAGACAAACTTTGATTC-ATCAAAAGTGGTGGAAAGAAAA-CTT
832 TTATTGTTTGTC-TTATTTAAAAGACAAACTTTGATTCGATCAAAAACGATGGAAAGAAAAGCTT
* *
1592569 TTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGCATGTG-
896 TTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * * *
1592620 TTTTGGTTCCTAATCTTTTAAAGAATGGAGACTATTACA-AGAATCAATTCTTGTCTTATTTAAG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTA-AGAGAATCAATGCTTGTCTTATTTAAG
* * * * *
1592684 GGATGAACTTTGATTTTAAGAAAAAATAGGGTAAAGAGAAGATTTACATGCAAAA-AAAATCATC
65 GGATAAACTTTGATTTTAAG-AAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATC
* * * * *
1592748 AATATCATTTATCCTAATGAGAAGAATCGTTTATAGTGACTAATGACATAATGAGTGAAGATC-T
129 AATATCATTTATCCTAATGAGGAGAATTGTTTATAGTGCCTAATCACATAATGAATGAAGATCAT
** * * * * * * *
1592812 TTGTCGGAAACCATATTTGTATCATTTGAGGCACAAACTTATACTTTATAAAAAGTGGTGC-AGA
194 TACT-AGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGA-A
* * * * **
1592876 AAAAGCCTTTCTTGCGAAACCAAGGAATCAATATCATGTATTCTAACAAGAAGACTATGTTTATG
257 AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATG
* * * *
1592941 GTGCCTAATCTTAAAAAGAATAGGGATTAGTATTACTATTGAT-TTTGTCTTATATAAGACG-CA
322 GTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTCTTATTTAAGA-GACA
** * * * *
1593004 AACTTTGATTATATC-AAAATAGTGGAAGGAAAAGCTTTTCTTGTGACA-CAAAACATCAATGTC
385 AACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC
* * * * ** * *
1593067 AAGTATCCTAATGAAGGGAATGTGTTTTTCGTTCCAATATTGAAAAGAATGGAGACTATTACCAG
450 ATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTGTTACGAG
* * * * * * * *
1593132 -ATAG-TGATTGTCTAATTTTAGGGA-AGAACTTTGATTTCAAGGAAAATAAGGCGAAGAAAAGA
515 AATTGATGCTTGTCTTATTTAAGGGATA-AACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGA
* * * * *
1593194 TTTTCATGCAAAAAGAAAATCTTC-ATACCACTTATCCTAATGAGGAGAATATGTTTATAGCGCC
579 TTTTCATGC-AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCC
* * ** * * **
1593258 TAATCACATAATGAATGAAGATAATTACCGGAA-CTCGTGTTTGTCTC-GTTGAGGCATTAACTT
643 TAATCACAAAATGAATGAAGATCATTACTAGAATC-CATGTTTGTCTCATTTGAGGCACGAACTT
* * * * * *
1593321 AGAC--TCCATAAATTTGGTGGGAATAAAG-ATGTTCTTGCCAAACCAAGGCATC-ATATCGTGT
707 AGACTTTACA-AAAATTGGTGGGAA-AAAGCCT-TTCTTGCGAAACCAAAGCATCAATATCATGT
** * * *
1593382 ATCCTTGTGAAAA-ACTATGTTTATGGTGGCCTAATCCTAAAAAGAATAGGGATTAGT-TGACTA
769 ATCCTAATGAAAAGACTATGTTTATGGT-GCCTAAT-CTGAAAAGAATGGGGATTTGTATGACTA
* * * * *
1593445 TTA-T-TTTGTCTTATTTAACAGACAAACTTTAATTCGATAAAAAAAGGTGGAAAGAAAAGCTTT
832 TTATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACGATGGAAAGAAAAGCTTT
* * * *
1593508 TCTTGTGACACAAAAGCATCGATGTCATGTATCCTAATGAAGGGAAAATGT
897 TCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * ** *
1593559 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGACACTTGTCTTCTTTAA--
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
** * * * *
1593622 GATAAACTTTGA--TTAATTAAAATATGGTAAAGAAAAGATTTTCATGC-AAA-AAAATCATC--
66 GATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCAA
* * * * * * * * **
1593681 -ATCATTTATCCTAAGGAAGAGAATGTTTTTATAATGCCTAATCAAAAAATAAATAAAGATTTTT
131 TATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGATCATT
* * * ** * *
1593745 GCTAGAATCAATGTTTGTCTCATTT-AGGGCAC-AAAATAGAC-TTACAAAAATTGGTAG-TAAA
195 ACTAGAACCCATGTTTGTCTCATTTGA-GGCACGAACTTAGACTTTATAAAAATTGGT-GCGAAA
** * * * * * * * **
1593806 AGTGCCTGTCTTACGAAACCAAACCATTAATATCATGTATTCTAATGAGAAGACTATCTTTGCGG
258 AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGG
* * *
1593871 TGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTATTGTTTGTCTTATTTAAGGGACAAA
323 TGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTCTTATTTAAGAGACAAA
* * * * * **
1593936 CTTTGATTCGGTCAACAACGATGGAAAGAAAAGCTTTT-TTGTGACACCAAAGCATCGGTGTCAT
387 CTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* * * * * *
1594000 GTATCCTAAAGAAGCGG-ATATGATTTTGGTTTCAATCTTTTAAAGAATGGTGACTATTA-GGGA
452 GTATCCTAATGAAG-GGAATATGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTGTTACGAGA
* * * * *
1594063 ATCGATGCTTGTCTTATTTAAAGGG-TAAACTTTGATATCAATTAAAATAGGGTAAAGAAAAAGA
516 ATTGATGCTTGTCTTATTT-AAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAG-AAAAGA
* * *
1594127 -TTTCAAAGCAAAAGAAAATCATCATCTTTCATTT-TCCCTAA-GAGGGAGAA--TG----T-GT
579 TTTTC-ATGCAAAAGAAAATCATCA-ATATCATTTAT-CCTAATGA-GGAGAATGTGTTTATAGT
* *** * *
1594182 --C----C-CATAATGAGCAAAGATCATTAGTAGAATCCCTGTTTGTCTCA-TTGAGGCACGGAA
640 GCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCAC-GAA
* * * * *
1594239 CTTAGACTTTACAAAAATTGGTGGAAAAAAATGCCTTCCCTGTGAAACCAAACCATCAATATCAT
704 CTTAGACTTTACAAAAATTGGTGG-GAAAAA-GCCTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * *
1594304 GTATCCTAATGAGAAGATTGTGCTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACT
767 GTATCCTAATGAAAAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATGACT
* **
1594369 -TTAATGTTTGTCTTATTGCAAAGACAAACTTTGATTCGATCAAAATA-G-TGGAAAGAAAAGCT
831 ATTATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAA-ACGATGGAAAGAAAAGCT
* * * *
1594431 TTTCTTGCGAC-CTAGTAGCATCAATGTCA-GCTATCCTAAAGAAGGGAAAATGT
895 TTTCTTGCGACACCA-AAGCATCAATGTCATG-TATCCTAATGAAGGGAATATGT
* * ** * * * *
1594484 TTTTGGTTCCC-ATCTTTT-AAGAATAGTTACTGTTGTGAGAATCGATACTTGTCTTAGTGAAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
** * *
1594547 GATAAACCTTTGATTTTAATTAAAATAGGGCAAAGAAAAAGTTTTCCATGCAAAAGAAAAAATCA
66 GATAAA-CTTTGATTTTAAGAAAAATAGGGCAAAG-AAAAGATTTCCATGCAAAAG--AAAATTA
* * * *
1594612 TCAAAATCATTTATCCTGATGAGGGGAATATGTTTATGGTG-CTAAATCACA-AATGAATGAAGA
127 TCAATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCT-AATCACATAATGAATGAAGA
* * * * * *
1594675 TCATTAC-AAAATCCGTGTTTGTC-CGTTTGAGGCATGAACATAGACTTTATAAAAATT-GTAG-
190 TCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGT-GC
* * * * *
1594736 GAAAATAG-CTTTCTTGC-AACGCCAAAGCCTCAATA-CGATGTATCATAA-GAGAAGACTATGC
254 GAAAAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCG-TGTATCCTAATGAGAAGACTATGT
* * *
1594797 TTATGGTGCATAATCTTGAAAAGAATGGGGATTTGTATGGACTATAACTG-TTGTCTTATTTAAG
317 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTAT-GACTATTA-TGTTTGTCTTATTTAAG
* * * * *
1594861 AGACAAACATTGATTCGATCAAAAAAGTTGGAATG-AAAGCTTTTCTTGCGACA-CAAAGCATCC
380 AGACAAACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
* * * * * *
1594924 ATGTTATGT-TACCTAATGACGGGATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGGGAC-G
445 ATGTCATGTAT-CCTAATGAAGGGAATATGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTG
* * * * *
1594987 AATACGAGAATCGATGCTTGTC-TATTTAGGGGATGAACTTTGATTTT-AGAAAAATAGGGCAAA
508 -TTACGAGAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAA
* * * *
1595050 GAAAAGATTTCCATGCATAAGAAAATTATCAATATCA-TTATCCTAATGTGGAGAATGTGTTTAT
572 GAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTAT
* * * * * *
1595114 AGTGCCTAATCACATAATGAATAAAGATCATTACTAGAACCCATATTTGTCTCATTTGAAGCATG
637 AGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACG
* * * * * *
1595179 AACATAGACTTTATAAAAATTAGTGCGAAAAAAAGCCTTTTTTGCGAAACCAAGGCATCAATATC
702 AACTTAGACTTTACAAAAATTGGTG-G-GAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATC
* *** * *
1595244 ATGTATCCCT-ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATG
765 ATGTAT-CCTAATGAAAAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATG
* * * * * *
1595308 ACTATTATTGTTTATCTTATTTAAGAGATAATCTTTGATTCAATCAAAAACCG-TGAAAAGAAAA
828 ACTATTATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAA-CGATGGAAAGAAAA
* * * * * *
1595372 GCTTTTCCTACAACACTAGAGCATCAATGTCATGTATCCTAATGAAGGGACTATGTT
892 GCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATG-T
* * * ** * * *
1595429 TTTTTGTTCCC-ATCTTTTAAGGAATGGTGACTGTTATGAGAATTGATGCTAGTTTTTTTTAAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
* * **
1595493 GATAAACTTTGATTTAAATTAAAAA-AGGGCAAAGAAAAGATTTCCATGCAGAAA-AAAAACATC
66 GATAAACTTTGATTTTAA-GAAAAATAGGGCAAAGAAAAGATTTCCATGCA-AAAGAAAATTATC
* * *
1595556 AATATCATTTACCCTAAGGAAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
129 AATATCATTTATCCTAATG-AGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGATC
* * * *
1595621 ATTACTAGAATCTATGTTTGTC-CAATTTGAGGCACGGACTTAGACTTTACAAAAATTGGTG-GT
192 ATTACTAGAACCCATGTTTGTCTC-ATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCG-
* ** * * ** * * *
1595684 AAAAAGGGTTTTCTTCTTGCGAAGCTAATCCATTAATATCGAGTAAT-CTAATGAGAAGACTATA
255 AAAAA-AG-CCT-TTCTTGCGAAACCAAAGCATCAATATCGTGT-ATCCTAATGAGAAGACTATG
* *
1595748 TTTATGGTGCCTAATCTTGAAAAGAATGGGGGATTTGTATGACTATTATTGTTTGTCCTATTTAA
316 TTTATGGTGCCTAATCTTGAAAAGAAT-GGGGATTAGTATGACTATTA-TGTTTGTCTTATTTAA
* * * * * * *
1595813 AAGACAAATTTTGATTCGATCAAAACA-GGTGCACAGAACAGCTTTTCTTGCAACACCAAGGCAT
379 GAGACAAACTTTGATTCGATCAAAA-ATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
** * * * *
1595877 CAATAACATGTATCCTAATAAAGGGAAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAATGGTGAT
443 CAATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTT-CCAATCTT-TTAAAGAATGGAGAC
* * ** * * *
1595941 TGCTATGAGAATCAATCCATGT-TTGATTTAAGGGATAAACTTTGACTTTTAATTAAAATAGGGC
506 TGTTACGAGAATTGATGCTTGTCTT-ATTTAAGGGATAAACTTTGA-TTTTAAGTAAAATAGGGC
* * * * * *
1596005 AAAGAATAGATTTCCATGCAAAAGAAAATCATAAATATCATTTATTCTAATGAGAAGAAGGTGTT
569 AAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTT
* * * ** * *
1596070 TATAGTGCCTAATCACGAAATGAATGAAGATCATTACTGGAACCCATGTTTGTCTTGTTCGAGGT
634 TATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGC
* ** *
1596135 ACGAACTTAGACTTTTCAAAAATTCTTGGGAAAAAAGCCTTTCTTGCGAAACCAAATCATCAATA
699 ACGAACTTAGACTTTACAAAAATTGGTGGG-AAAAAGCCTTTCTTGCGAAACCAAAGCATCAATA
* * * * * * *
1596200 TGATGTATCTTAAGGAGAAGACTATGTTTATGGTGCCTAATGGTGAAAATGAACGGGGATTAGTA
763 TCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCTAAT-CTGAAAA-GAATGGGGATTTGTA
* * * * * * * * *
1596265 TGAGTATTCA-TGTTTGTCTTAATTAAGAGGCAAACTTTGGTTCTATCAAAAATGGTGGAAAGGA
826 TGACTATT-ATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACGATGGAAAGAA
* * * * *
1596329 AAGTTTTTCTTGCGACACCAAAGCATTAATGTCATGTATCATAATAAAGGGAATGTGT
890 AAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* ** * *
1596387 GTTTTGGTTCTCAATCTTGAAAAAGAATGGAGACTGTTATGAGAATCAATGCTTGTCTTATTTAA
1 -TTTTGGTTCCCAATCTT-TTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAA
* * * ** *
1596452 GGGATGAACTTTGA-TTCAAGTAAAATAGGGCAAAGAAAAGATTTTAATGCAAAAGAAAATTGTC
64 GGGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATC
* * *
1596516 AATATCGTTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAATGAGTGAAGATC
129 AATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCAC-ATAATGAATGAAGATC
* * * * * * *
1596581 ACT-CATA-AATCCACGTTTATCTCATTTGAGGCATGAACTTAGAATTTAAAAAAAATTGGTG-G
192 ATTAC-TAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTT-ATAAAAATTGGTGCG
* * * *
1596643 GAAAATGCCTTT-TTGCGAAAGCAAAACATCAATATCGTGTATCCTAATGA-AAGACTTATGTTT
255 AAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGAC-TATG-TT
* * * * * * ** * * ** * *
1596706 TATGG-CCCCAATCATGAAAA-ATTGGAGATTATTACAACAATCCAAATTCGTGTTATTTGAAG-
318 TATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTAT-TATGTTTGTCTTATTT-AAGA
* * * * * * * *
1596768 GACGAACTTTGATTCTAATCGAAAATGATGAAAAGAAAAGGTTCTTTTATG-G-CACCAAAGCCT
381 GACAAACTTTGATTC-GATCAAAAATGGTGGAAAGAAAAGCTT-TTCT-TGCGACACCAAAGCAT
* * * * * * * * * ** *
1596831 TAATGTCTTGTCTCCTAAAGATGGTAAACACGTTTTTGCTTCCAATC-TCGAAATGAATGAAGAC
443 CAATGTCATGTATCCTAATGAAGG-GAATATGTTTTTGGTTCCAATCTTTTAAA-GAATGGAGAC
** * * * * ** * *
1596895 AATTACAAGAATCT-AT-ATTGGTGTCATTTGGGGGATGAACTTTGATTTTAAGGAAAAT-GGGT
506 TGTTACGAGAAT-TGATGCTT-GTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGG-
* * * * ** * * * * ** * * ** *
1596957 CAAAGAACA-CTTTTCTTG-AGACATCAAAGCAACAATATCGTGTATTGTAGTG-GGAAAACATA
568 CAAAGAAAAGATTTTCATGCA-AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTG
* ** ** * ** * * * * * *
1597019 TTTGTAGTGCCTAATCGTTAGCA-G-ATGGAGATGGTTA-TGACAACCCATGGTGGTCGCCTTTG
632 TTTATAGTGCCTAATC-ACAAAATGAATGAAGATCATTACT-AGAATCCATGTTTGTCTCATTTG
* * ** * * * * * *
1597081 AAGG-ATGAACATT-GA-TTCTATAAAAAACGGTGGAAAGAAAAGCTTTTTTTG-AAACACCCAC
695 -AGGCACGAAC-TTAGACTT-TACAAAAATTGGTGG-GA-AAAAGCCTTTCTTGCGAA-ACCAAA
* * * * ** * * * * * * *
1597142 GCATCAATGTTATGCATCCTAACGAAGTGAATGTGTTTTTAGTTCCCAATCTTGAAAAGAATGGA
754 GCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGG
* * * ** * * * ** ** * ** * * *
1597207 GACTAGTACGAGAATCAATGCTTGTCTTATTTAAGGGATGAACTTTTATTTTATGAAAAA-TAGG
818 GATTTGTATGACTATTATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACGATG
* * * ** * * * * * * * *
1597271 GCAAAGAAAAG-ATTTCAATGC-AAAGAAAATCATCAGTAATCATTTACCCTATTGAAGAGAATG
883 G-AAAGAAAAGCTTTTC-TTGCGACACCAAAGCATCAAT-GTCATGTATCCTAATGAAGGGAATA
1597334 TGT
945 TGT
* *** ** *** * * ** * *
1597337 TTTT-ATAATGCTGGATC--ACAAATGAATTAAGA-TCATTATTG-GAATCCTTGTTTGTCTCAT
1 TTTTGGT--T-CCCAATCTTTTAAA-GAATGGTGACT-GTTA-AGAGAATCAATGCTTGTCTTAT
* * * * * * * *** * ** **
1597397 TT-AGAGCATAAACTTAGACTTT-ACAAAAATTGTTGG--TACAAATCCTTT-CTTGTGAAACCA
60 TTAAG-GGATAAACTTTGATTTTAAGAAAAATAG--GGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * * * * * * ** * *
1597457 AA-CATCAATATCGTGTATCATTATGAGAAGACTATGTTTAT-GGGCCTTAATCTTGA-AAAGTA
122 AATTATCAATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCC-TAATC-ACATAATGAA
* * ** * * * * *
1597519 T-AGGGATTAGTATGACTATTA-CC--GTTTGTCTTATTTGATAGCA--AACTTTGA-TTCGATC
184 TGA-AGATCA-T-T-ACTAGAACCCATGTTTGTCTCATTTGA-GGCACGAACTTAGACTT-TATA
**** * * * * * *
1597577 AAAA-CCAAG-GAAAGAAATTGCTTTTCTTGCGACACCCAAGCATCAATGTCATGTATCCTAACG
243 AAAATTGGTGCGAAA-AAA--GCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATG
* * * ** * * ** * * ** *
1597640 A-AGGGAATATGTTT-TGGTACCTAAGCTCTTTTAAGGAATGGTGACAATTACGAGAATCGAT-T
305 AGA-AGACTATGTTTATGGTGCCTAA--TCTTGAAAAGAATGGGGATTAGTATGACTAT-TATGT
* * * ** * * ** * *
1597702 CTTCTCTTATTT-AGGGAATAAACTTTGATTTTAATTAAAATAAGGT--AAA-AAAATATTTCCA
366 -TTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAA-ATGGTGGAAAGAAAAGCTTTTCT
* * * ** * * * * * * *
1597763 TCCAAAAGAAAATCATCAATATCATTTATCCTAATG-AGAAGAATATGTTTATAGTGCCTAATC-
427 TGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GGAATATGTTTTTGGTTCC-AATCT
*** * * * * ** * * * * ** * *
1597826 ACAAAATGAATGAAGA-TCATTGCTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGA-C
490 TTTAAA-GAATGGAGACT-GTTACGAGAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATT
* * * * * ** * * ** ** * *
1597889 TTACA--AAAGTTGGTGGAAA-AGATGCCTTCCTTGTGAAACCAAACCATCAATATCATGTATCC
553 TTA-AGTAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCC
* * * ** ** * *
1597951 TAATGA-GAAAATTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGAT--TT-GTATGACTT
616 TAATGAGGAGAA-TGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCATTACTA-GA-AT
** * * * * * ** **
1598011 TAATG-TTGTCTTA-TTGCAAAG-ACAAACTTTGA-TTCGATCAAAAA-CAGTGAAAAAAAAAGC
677 CCATGTTTGTCTCATTTG--AGGCACGAACTTAGACTT-TA-CAAAAATTGGTG--GGAAAAAGC
* * * * * ** * ** ** * * *
1598071 TTTTCTTGCGACACTATAGCATCAATGTCAACTATCCTAAAGAAGGGAAAATGTTTTTGGTTCCC
736 CTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCT
*** ** * * * * * ** *
1598136 AATCTTTTTAAGAATGGTTACTGTTGTGA-GA--ATCGA-GGCTTGTCTTAATGAAGGGATAAAC
801 AATC-TGAAAAGAATGGGGA-T-TTGT-ATGACTAT-TATTGTTTGTCTTATTTAAAAGACAAAC
** * * * ** * **
1598197 TTTGATTTTAATTAAAATA-G--GGCAAAGAAAAG-TTTTCTATGCAAAAGAAAATCATCAAAAT
861 TTTGA-TTCGATCAAAA-ACGATGG-AAAGAAAAGCTTTTCT-TGCGACACCAAAGCATCAATGT
* * * *
1598258 CATTTATCCTGATGAGGGGAATGTGT
922 CATGTATCCTAATGAAGGGAATATGT
* * * *** ** * ** * * *
1598284 TTATGGTGCCAAATC-ACAAAATGAATGAAGA-TCATTACA-A-AATCCGTGTTTGTCTCATTTG
1 TTTTGGTTCCCAATCTTTTAAA-GAATGGTGACT-GTTA-AGAGAATCAATGCTTGTCTTATTTA
* * * * * * * * * * ** * *
1598345 AGGCATGAACATAGACTTT-ACAAAAAT-TGG-TAGGAAAAGAGCCTTT-CTTGCAATGGCAAAG
63 AGGGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGA---TTTCCATGCAAAAGAAAAT
** * * * * * * * * * * *
1598406 CGTC-ATATGATGTATCGTAAAGAGAAGACTATGCTTATGGTGCATAATC-C-TGAAAAGAATGG
125 TATCAATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACAT--AATGAATGA
* * *** * * * * *
1598468 GGAT--TT-GTATGACTATTAATGTTTGTCTTATTTAAGAG-ACAAACACT-GA-TTCAATCAAA
187 AGATCATTACTA-GA--ACCCATGTTTGTCTCATTTGAG-GCACGAAC-TTAGACTT-TAT-AAA
** * * * * * **
1598527 AA-CAGTG-GAATGAAAAGCTTTTCTTGCGACACCAAAGGATCCATGTTATGTAT-CTAATGACG
245 AATTGGTGCGAA--AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGA-G
* * * * * * ** * ** * * ** * *
1598589 -GGATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGGGACGAATACGAGAATCAATGCTTGTC
307 AAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTAT-TATGTTTGTC
* * ** ** ** * * * * *
1598653 TTATTTAGGGGATGAACTTTGATTTTAAGAAAAATAGG-GCAAAGAAAAGATTTCCATGC-ATAA
371 TTATTTAAGAGACAAACTTTGATTCGATCAAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGA-CA
** ** * * * * * * *** *
1598716 GAAAATTATCAATATCAT-TATCCTAATG-TGGAGAATGTGTTTATAGTGCCTAATCACATAATG
434 CCAAAGCATCAATGTCATGTATCCTAATGAAGG-GAATATGTTTTTGGTTCC-AATCTTTTAAAG
** * * *** ** * * * * *
1598779 AATAAAGA-TCATTACTAGAACCCATATTTGTCTCATTTGAA-GCATGAACATAGACTTTATAA-
497 AATGGAGACT-GTTACGAGAATTGATGCTTGTCTTATTT-AAGGGATAAACTTTGA-TTT-TAAG
* * * * * ** ** *
1598841 -AAATTAGTGCGAA-AAAAGCCTTTT--TGCGAAACCAAGGCATCAATATCATGTATCCCT-ATG
558 TAAAATAGGGCAAAGAAAAG-ATTTTCATGCAAAAGAAAATCATCAATATCATTTAT-CCTAATG
* * * * ** * *
1598901 AGAAGACTATGTTTATGGTGCCTAATCTTGAAAA-GAA--AATG-T-ATTAGTATGACTAT-TAT
621 AGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAA-GATCATTACTA-GA--ATCCAT
* * * * * * ** ** *
1598960 -TGTTATCTTATTTAAGAG-A-TAATCTTTGA-TTCAATCAAAAA-CCGTGAAAAGAAAAGCTTT
681 GT-TTGTCTCATTTGAG-GCACGAA-CTTAGACTT-TA-CAAAAATTGGTG-GGA-AAAAGCCTT
* * * * * ** * * * *
1599020 TCCTAC-AACACTAGAGCATCAATGTCATGTATCCTAATGAAGGGACTATGTTTTTTGTTCCCAA
739 TCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCTAA
** * * * ** * * * ** *
1599084 TCTTTTAAGGAATGGTGA-CTGTTATGAGAATTGA-TGCTAGT-TTTTTTAAGGGATAAACTTTG
803 TC-TGAAAAGAATGGGGATTTG-TATGACTATT-ATTGTTTGTCTTATTTAAAAGACAAACTTTG
** * * * * * ** ** *
1599146 ATTTAATTAAAAA--AGGGCAAAGAAAAGATTTCCATGCAGA-AGAAAATTATCAATATCAT-TA
865 ATTCGATCAAAAACGATGG-AAAGAAAAGCTTTTCTTGC-GACACCAAAGCATCAATGTCATGTA
* *
1599207 TCCTAATG-TGGAGAATGTGT
928 TCCTAATGAAGG-GAATATGT
* * * * *** * *** * ** * * ** *
1599227 TTATAGTGCCTAATCACATAATGAATAAAGA-TCATTACTAGAACCCATATTTGTCTCATTTGAA
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACT-GTTAAGAGAATCAATGCTTGTCTTATTT-AA
* * * * * * * * * ** * ** ***
1599291 -GCATGAACATAGACTTTATA-AAAATTAGTGCGAA-AAAAGCCTTT-TTTGCGAAACCAAGGCA
64 GGGATAAACTTTGATTTTA-AGAAAAATAGGGCAAAGAAAAG-ATTTCCATGCAAAAGAAAATTA
* * * * * *
1599352 TCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGGTGCCTAAT--C-T--TGAAAAGAAA
127 TCAATATCATTTAT-CCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATG-AATGAAG
* * * * * * * * *
1599411 ATGTATTAGTATG-A-CTAT-TATTGTTATCTTATTTAAGAG-A-TAATCTTTGA-TTCAATCAA
189 AT-CATTACTA-GAACCCATGT-TTG---TCTCATTTGAG-GCACGAA-CTTAGACTT-TATAAA
** ** * * * * * * *
1599470 AA-CCGTGAAAAGAAAAGCTTTTCCTAC-AACACTAGAGCATCAATGTCATGTATCCTAATGA-A
245 AATTGGTGCGAA-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCGTGTATCCTAATGAGA
* * * * * ** * * * ** * *
1599532 GGGACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGTGACT-GTTATGAGAATTGATGCTAGT
308 -AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAG-TATGACTATT-ATGTTTGT
* * * * ** * * * * * *
1599596 TTTTTTTAAGGGATAAACTTTGATTTAAATTAAAAAAGG-GCAAAGAAAAGATTTCCATGCAGA-
370 CTTATTTAAGAGACAAACTTTGA-TTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGC-GAC
** * * * * * * * ***
1599659 AAAAAAACATCAATATCATTTACCCTAA-GAAGGAGAATATGTTTATAGTGCCTAATC-ACAAAA
433 ACCAAAGCATCAATGTCATGTATCCTAATGAAGG-GAATATGTTTTTGGTTCC-AATCTTTTAAA
* * * * ** * * *** * *
1599722 TGAATGAAGA-TCATTACTAGAATCT-ATGTTTGTCCAATTTGAGGCACGGACTTAGACTTTACA
496 -GAATGGAGACT-GTTACGAGAAT-TGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTA-A
* * ** * * * ** * * *
1599785 --AAAATTGGTGGTAAA-AAGGGTTTTTCTTGC-GAAGCTAATCCATTAATATCGAGTAAT-CTA
557 GTAAAA-TAG-GGCAAAGAAAAGATTTTCATGCAAAAGAAAAT-CATCAATATC-ATTTATCCTA
* * * * * ** ** * *
1599845 ATGAGAAGACTATATTTATGGTGCCTAATCTTGAAAA-GAATGGGGAT--TT-GTATGACTAT-T
618 ATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCATTACTA-GA--ATCC
* * * * * * *
1599905 ATTGTTTGTC-CTATTTAAAAG-ACAAATTTTGA-TTCGATCAAAACA--GGT-GCACAGAACAG
679 A-TGTTTGTCTC-ATTT-GAGGCACGAACTTAGACTT-TA-CAAAA-ATTGGTGGGA-A-AA-AG
* * * * ** * *
1599964 CTTTTCTTGC-AACACCAAGGCATCAATAACATGTATCCTAAT-AAAGGGAAAATGTTTTTGGTT
735 CCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATGAAA-AGACTATGTTTATGGTG
* * * * ** * * *** ** *
1600027 CCCAATTTGTTAAAGAATGGTGA-TTGCTATGAGAATCAATCCATGT-TTGATTTAAGGGATAAA
798 CCTAATCTG-AAAAGAATGGGGATTTG-TATGACTATTATTGTTTGTCTT-ATTTAAAAGACAAA
** * * * * * * * ** * * *
1600090 CTTTGACTTTAATTAAAATA-G--GGCAAAGAATAGATTTCCATGCAAAAGAAAATCATAAATAT
860 CTTTGA-TTCGATCAAAA-ACGATGG-AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGT
* * * **
1600152 CATTTATTCTAATG-AGAAGAAGGTGT
922 CATGTATCCTAATGAAG-GGAATATGT
* * * * *** ** * * * * * * **
1600178 TTATAGTGCCTAATC-ACGAAATGAATGAAGA-TCATTACTG-GAACCCATGTTTGTCTTGTTCG
1 TTTTGGTTCCCAATCTTTTAAA-GAATGGTGACT-GTTA-AGAGAATCAATGCTTGTCTTATTTA
* ** * * * ** * * * **
1600240 AGGTACGAACTTAGACTTTTCA-AAAATTCTTGG--AA-AAAAGCCTTT-CTTGCGAAACCAAAT
63 AGGGATAAACTTTGA-TTTTAAGAAAAAT-AGGGCAAAGAAAAG-ATTTCCATGCAAAAGAAAAT
* * * * * * * * *** * * **
1600300 CATCAATATGATGTATCTTAAGGAGAAGACTATGTTTATGGTGCCTAATGGTGAAAATGAACGGG
125 TATCAATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAAT-CACATAATGAATGAA
* * * ** * * * *
1600365 GATTAGTA-TGAGTATTCATGTTTGTCTTAATTAAGAGGCA--AACTTTG-GTTCTATCAAAAA-
188 GATCATTACT-AGAACCCATGTTTGTC-TCATT-TGAGGCACGAACTTAGACTT-TAT-AAAAAT
** * * * * *
1600425 TGGTG-GAAAGGAAAGTTTTTCTTGCGACACCAAAGCATTAATGTCATGTATCATAAT-A-AAGG
248 TGGTGCGAAA--AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAA--
* * * * * * ** * *
1600487 GAATGTGTTTTTGGT-TCTCAATCTTGAAAAGAATGGAGACT-GTTATGAGAATCAATGCTTGTC
309 GACTATGTTTATGGTGCCT-AATCTTGAAAAGAATGGGGATTAG-TATGACTAT-TATGTTTGTC
* ** * * * ** * *
1600550 TTATTTAAGGGATGAACTTTGATTTCAAGT--AAAATAGG-GCAAAGAAAAGATTTTAATGCAAA
371 TTATTTAAGAGACAAACTTTGA-TTCGA-TCAAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGAC
** *** * * * * * * * ***
1600612 AGAAAATTGTCAATATCGTTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATC-ACAAAA
433 ACCAAAGCATCAATGTCATGTATCCTAATGAAGG-GAATATGTTTTTGGTTCC-AATCTTTTAAA
* * ** * * ** * * * * * * * * * *
1600675 TGAGTGAAGATCACTCA-TAGAATCCACGTTTATCTCATTTGAGGCATGAACTTAGAATTTAA-A
496 -GAATGGAGA-CTGTTACGAGAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGT
* * * * * *
1600738 AAAATTGGTG---GGAAAATGCCTTTT--TGCGAAAGCAAAA-CATCAATATCGTGTATCCTAAT
559 AAAATAGG-GCAAAGAAAA-G-ATTTTCATGCAAAAG-AAAATCATCAATATCATTTATCCTAAT
** * * * * * * * * * **
1600797 GAAAAGACTATGTTTAT-G-GCCCCAATCATGAAAA--ATTGGAGATTATTACAACAATCCAAAT
620 GAGGAGAATGTGTTTATAGTG-CCTAATCA-CAAAATGAATGAAGATCATTACTAGAATCCATGT
* * * * * * * * *
1600858 TCGTGTTATTTGAAGG-ACGAACTTTGA-TTCTATCGAAAA-TGATGAAAAGAAAAGGTTCTTT-
683 TTGTCTCATTTG-AGGCACGAACTTAGACTT-TA-CAAAAATTGGTG---GGAAAAAG-CCTTTC
* * * * * * * ** * * * * *
1600919 TATG-G-CACCAAAGCCTTAATGTCTTGTCTCCTAAAG-ATGGTAAC-ACGTTTTTGCTTCCCAA
741 T-TGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAAAG--ACTATGTTTATGGTGCCTAA
* ** * ** * * **** **
1600980 TCTCGAAATGAATGAAGACAATTACAAGAATCTA-TATTG-GTGTC--ATTTGGGGGATGAACTT
803 TCT-GAAAAGAATG--GGGATTTGTATG-A-CTATTATTGTTTGTCTTATTTAAAAGACAAACTT
** *** * * * * * * *
1601041 TGATTTTAAGGAAAATG--GGTCAAAGAACA-CTTTTCTTGAGACATCAAAGCAACAATATCGTG
863 TGATTCGATCAAAAACGATGG--AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
** * * *
1601103 TATTGTAGTG--GGGAAAACATAT
926 TATCCTAATGAAGGG--AATATGT
* * * * * * * * * * * * * ***
1601125 TTGTAGTGCCTAATC-GTTAGCAG-ATGGAGA-TGGTTATGACAACCCATGGTGGTCGCCTTTGA
1 TTTTGGTTCCCAATCTTTTA-AAGAATGGTGACT-GTTAAGAGAATCAATGCTTGTCTTATTT-A
* * * * * * *** ** **
1601187 A-GGATGAACATTGATTCTATA-AAAAA-CGGTGGAAAGAAAAGCTTTTTTTG-AAACACCAACG
63 AGGGATAAACTTTGATTTTA-AGAAAAATAGG-GCAAAGAAAAGATTTCCATGCAAA-AGAAAAT
* * * ** * * * * * * ** * *
1601248 CATCAATGTTATGCATCCTAACGAAGTGAATGTGTTTTTAGTTCCCAATCTTGA-AAAGAATGGA
125 TATCAATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATC-ACATAATGAATGAA
* * * * * * * * ** * *
1601312 GA-CTATTACGAGAATCAATGCTTGTCTTATTTAAGGGATGAACTTTTATTTTATGAAAAATAGG
188 GATC-ATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAATTGG
* * * * ** * * * * * * *
1601376 -GCAAAGAAAAG-ATTTCAATGCAAAAGAAAATCATCAGTATCATTTACCCTATTGA-AGAGAAT
251 TGCGAA-AAAAGCCTTTC-TTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGA-AGACT
* ** * ** * *** * * * ** *
1601438 GTGTTTATAATG-CTGGATC-ACAAATGAATTAAGATCATTATTGGAATCCT-TGTTTGTCTCAT
313 ATGTTTATGGTGCCT-AATCTTGAAAAGAATGGGGATTAGTA-T-GACTATTATGTTTGTCTTAT
* * * * * * * * * *
1601500 TT-AGAGCATAAACTTAGACTT-TA-CAAAAATTGTTGG-TACAAATGCCTTTCTTGTGAAACCA
375 TTAAGAG-ACAAACTTTGA-TTCGATCAAAAA-TGGTGGAAAGAAAAGCTTTTCTTGCGACACCA
* * * * * * * * * ** *
1601561 AACCATCAATATCGTGTATCATTATG-AGAAGACTATGTTTATGG-GCCTTAATCTTGAAAAGTA
437 AAGCATCAATGTCATGTATCCTAATGAAG-GGAATATGTTTTTGGTTCC--AATCTTTTAAAGAA
* * ** * * * ** * ** ***
1601624 TAGG-GATTAG-TATGACTATT-ACCGTTTGTCTTATTTGATAGACAAACTTTGATTCGATCAAA
499 T-GGAGACT-GTTACGAGAATTGA-TGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAA
* * * * * * * ** * * * *
1601686 AACCAAGG-AAAGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAACGAAGG
561 AA-TAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATG-AGG
* * * * **** * ** * * *
1601750 -GAATATGTTTTTGGTACCTAATCTTTTAAGGAATGGTGA-CAATTACGAGAATCGAT-TCTTCT
624 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC-ATTACTAGAATCCATGT-TTGT
* * * ** * * * ** *** * * *
1601812 CTTATTTTAGGGATAAACTTTGATTTTA-ATTAAAATAAGGT-AAAAAAAATATTTCCATCCAAA
687 CTCATTTGAGGCACGAACTTAGACTTTACA--AAAAT-TGGTGGGAAAAAGCCTTT-CTTGCGAA
** * * * * * **
1601875 AGAAAATCATCAATATCATTTATCCTAATGAGAAGAATATGTTTATAGTGCCTAATCACAAAATG
748 ACCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCTAATCTGAAAA-G
** * * * * * * *
1601940 AATGAAGATCATTGCTA-GA--ATCCA-TGTTTGTCTCATTT-GAGGCACGAACTTAGACTT-TA
812 AATGGGGAT--TTG-TATGACTAT-TATTGTTTGTCTTATTTAAAAG-ACAAACTTTGA-TTCGA
** * * * * * * * * *
1601999 -CAAAAGTTGGTGGAAA-AGATGCCTTCCTTGTGAAACCAAACCATCAATATCATGTATCCTAAT
871 TCAAAA-ACGATGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAT
**
1602062 G-AGAAAATTATGT
935 GAAGGGAA-TATGT
* * * ** * * * ** * * *
1602075 TTATGGTGCCTAATCTTGAAAAGAATGGGGA-TTTGTATGA-CTTTAATGTTTGTCTTATTGCAA
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGT-TAAGAGAATCAATGCTTGTCTTATT-TAA
* * ** ** * * * * * * * * ** * **
1602138 -AGACAAACTTTGATTCGATCAAAAACAGTG-AAAAAAAAGCTTTTCTTGCGACACTATAGCATC
64 GGGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATC
* ** * * * * * * ***
1602201 AATGTCAACTATCCTAAAGAAGG-GAAAATGTTTTTGGTTCCCAATCTTTTTAA-GAATG--G-T
129 AATATCATTTATCCTAATG-AGGAG-AATTGTTTATAGTGCCTAATC-ACATAATGAATGAAGAT
* ** * * * * * * * ** * * * *
1602261 TACTGTTGTGAGAATCGAGGCTTGTCTTA-ATGAAGGGATAAACTTTGATTTTAATTAAAATAGG
191 CA-T-TACT-AGAACCCATGTTTGTCTCATTTG-AGGCACGAACTTAGACTTT-ATAAAAATTGG
* * * ** * * * * * ** * *
1602325 -GCAAAGAAAAG-TTTTCTATGCAAAAGAAAATCATCAAAATCATTTATCCTGATGAGGGGAATG
251 TGCGAA-AAAAGCCTTTCT-TGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTA
* ** ** * * * ** ** *
1602388 TGTTTATGGTGCCAAATC-ACAAAATGAATGAAGATCATTA-CAAAATCCGTGTTTGTCTCATTT
314 TGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTATGACTAT-TATGTTTGTCTTATTT
* * * * * * * ***
1602451 --GAGGCATGAACATAGACTT-TA-CAAAAATTGGTAGG-AA-AAGAGCCTTTCTTGCAATGGCA
377 AAGAGACA--AACTTTGA-TTCGATCAAAAA-TGGT-GGAAAGAAAAGCTTTTCTTGCGACACCA
* * * * * * * * * * * * **
1602510 AAGCGTCAATATGATGTATCGTAAAG-AGAAGACTATGCTTATGGTGCATAATCCTGAAAAGAAT
437 AAGCATCAATGTCATGTATCCTAATGAAG-GGAATATGTTTTTGGTTC-CAATCTTTTAAAGAAT
* * * ** * * * * ** *
1602574 GGGGA-TTTGTATGACTATTAATGTTTGTCTTATTTAAGAGACAAACACTGA-TTCAA-TCAAAA
500 GGAGACTGT-TACGAGAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGT--AAA
* * * * * * ** ** * * * *
1602636 ACAGTGG-AATGAAAAGCTTTTCTTGCGACACCAAAGGATCCATGTTATGTAT-CTAATGACGG-
562 ATAG-GGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGA-GGA
* * * * * *** ** * * * *
1602698 GATTGTGTTTTTGGTTCCCAATCTTTTAAAT-AATGGGGA-CGAATACGAGAATCAATGCTTGTC
625 GAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATC-ATTACTAGAATCCATGTTTGTC
* * * * * * * ** * *
1602761 TTATTT-AGGGGATGAACTTTGATTTTAAGAAAAATAGG-GCAAAGAAAAG-ATTTCCATGC-AT
688 TCATTTGA-GGCACGAACTTAGACTTT-ACAAAAATTGGTG-GGA-AAAAGCCTTT-CTTGCGA-
** ** *** * * * ** *
1602822 AAGAAAATTATCAATATCAT-TATCCTAATGTGGAGAATGTGTTTATAGTGCCTAATCACATAAT
747 AACCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCTAATCTGA-AAA
*** * * * * * *
1602886 GAATAAAGATCAT-TACTAGAACCCA-TA---TTTGTCTCATTT-GAAG-CATGAACATAGACTT
811 GAATGGGGAT-TTGTA-T-G-A-CTATTATTGTTTGTCTTATTTAAAAGACA--AACTTTGA-TT
* ** * * *
1602944 -TAT-AAAAATTAGTGCG-AA-AAAAGCCTTTT-TTGCGAAACCAAGGCATCAATATCATGTATC
868 CGATCAAAAACGA-TG-GAAAGAAAAG-CTTTTCTTGCGACACCAAAGCATCAATGTCATGTAT-
* *
1603004 CCT-ATG-AGAAGACTATGT
929 CCTAATGAAG-GGAATATGT
* * * ** * * ** * * *
1603022 TTATGGTGCCTAATCTTGAAAAGAAAAT-GT-ATTAG-TATGACTATTATTG-TTATCTTATTTA
1 TTTTGGTTCCCAATCTTTTAAAG--AATGGTGACT-GTTAAGAGAATCAATGCTTGTCTTATTTA
* * * * ** * * * * * ** * **
1603083 AGAGATAATCTTTGA-TTCAATCAAAAACCGTGAAAAGAAAAGCTTTTCC-TACAACACTAGAGC
63 AGGGATAAACTTTGATTTTAA-GAAAAATAGGGCAAAGAAAAG-ATTTCCATGCAAAAGAAAATT
* * * * * * * *** * **
1603146 ATCAATGTCATGTATCCTAATGAAGG-GACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGTG
126 ATCAATATCATTTATCCTAATG-AGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAG
* *** * * ** * * ** * *
1603210 A-CTGTTA-TGAGAATTGATGCTAGT-TTTTTTAAGGGATAAACTTTGA-TTTAAATTAAAAA-A
189 ATC-ATTACT-AGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTT--A-TAAAAATT
* * * * * * * * *
1603270 GG-GCAAAGAAAAG-ATTTCCATGCAGAAA-AAAATCATCAATATCATTTACCCTAA-GAAGGAG
249 GGTGCGAA-AAAAGCCTTT-CTTGC-GAAACCAAAGCATCAATATCGTGTATCCTAATG-AGAAG
* * ** ** * *
1603331 AATATGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCATTACTAGA--ATCTATGTTTGTC
310 ACTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTA-T-GACTAT-TATGTTTGTC
* * ** * * * * *
1603393 TAATTTGAG-GCACGGACTTAGACTT-TA-CAAAAATTGGTGGTAA-AAAGGGTTTTCTTGCGA-
371 TTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAAA-TGGTGGAAAGAAAAGCTTTTCTTGCGAC
* ** * * * * * * * **
1603453 AGCTAATCCATTAATATCGA-GTAAT-CTAATG-AGAAGACTATATTTATGGTGCCTAATCTTGA
433 A-CCAAAGCATCAATGTC-ATGT-ATCCTAATGAAG-GGAATATGTTTTTGGTTCC-AATCTTTT
* * * ** * * ** * *
1603515 AAAGAATGGGGA-TTTGTATGACTATT-ATTGTTTGTCCTATTTAAAAGACAAATTTTGA--TT-
493 AAAGAATGGAGACTGT-TACGAGAATTGA-TGCTTGTCTTATTTAAGGGATAAACTTTGATTTTA
* * * * * ** ** * *
1603575 AGATCAAAACAGGTGCACAGAAAAGCTTTTCTTGCAACACCAAGGCATCAATAACATGTATCCTA
556 AG-T-AAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTA
* * * * * **** ** *** *
1603640 ATAAAGGGAAAATGT-TTT-TGGTTCCCAATTTGTTAAA-GAATGGTGATTGCTA-TAAGAATCA
618 AT-GA-GGAGAATGTGTTTATAGTGCCTAA-TCACAAAATGAATGAAGATCATTACT-AGAATCC
*** * * * * ** * * * ** *
1603701 ATCCATGTTTGATTTAAGGGATAAACTTTGATTTTA-ATTAAAATAGG-GCAAATAATAG-ATTT
679 ATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACA--AAAATTGGTGGGAA-AA-AGCCTTT
** * ** * * * * * * *
1603763 CCAAGCAAAAGAAAATCATAAATATCATTTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAAT
740 -CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAAAGACTATGTTTATGGTGCCTAAT
* * ** * ** * ** * *
1603828 CACGAAATGAATGAAGATCAT-TACTGGA--ACCCA-TGTTTGTCTT-GTTCGAGGTACGAACTT
804 C-TGAAAAGAATGGGGAT-TTGTA-T-GACTA-TTATTGTTTGTCTTATTTAAAAG-ACAAACTT
* * * * * * * * *
1603888 AGACTT--TTCAAAAATTC-TTGGGAA-AAAAGCCTTTCTTGCGAAACCAAATCATCAATATGAT
863 TGA-TTCGATCAAAAA--CGATGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* * * *
1603949 GTATCTTAA-GGAGAAGACTATGT
925 GTATCCTAATGAAG-GGAATATGT
* ** * * *** * * * * * *
1603972 TTATGGTGACTAATGGTGGAAAAGAATGGGGATTAG-TATGAGTATTC-ATGTTTGTCTTAATTA
1 TTTTGGTTCCCAAT-CTTTTAAAGAATGGTGACT-GTTAAGAG-AATCAATGCTTGTCTTATTTA
* * * * ** * * * * * * * * ** **
1604035 AGAGG-CAAACTCTGGTTCTATCAAATAT-GGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAGC
63 AG-GGATAAACTTTGATTTTAAGAAAAATAGG-GCAAAGAAAAGATTTCCATGCAAAAGAAAATT
* * * * * * * * ** *
1604098 ATCAATGTCATGTATCATAATAAAGG-GAATGTGTTTTTGGTTCTTAATCTTGA-AAAGAATG--
126 ATCAATATCATTTATCCTAAT-GAGGAGAAT-TGTTTATAGTGCCTAATC-ACATAATGAATGAA
* * * * * * * * *
1604159 GATACTGTTACGAGAATCAAT-TCTTGTCTTATTTAAGGGATGAACTTTGA-TTTCA-AGTAAAA
188 GAT-C-ATTACTAGAACCCATGT-TTGTCTCATTTGAGGCACGAACTTAGACTTT-ATA--AAAA
* * ** ** * ** * * *
1604221 TAGG-GCAAACAAAAGATTTTAATGCAAAAGAAAATCATCAATATCGTTTATCCTAATGAGGAGA
247 TTGGTGCGAA-AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGA
* * * ** * ** * * ** * *
1604285 ATGTGTTTATAGTGCCTAATC-ACAAAATGAGTGAAGATCATTCATAGA--ACCCACGTTTATCT
311 CTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGT-AT-GACTA-TTATGTTTGTCT
* * * * * * * *
1604347 CATTTGAG-GCACGAACTTAGACTT-TA-CAAAAATTGGTGG---GAAAATGCCTTTCTTGCAAA
372 TATTTAAGAG-ACAAACTTTGA-TTCGATCAAAAA-TGGTGGAAAGAAAA-GCTTTTCTTGCGAC
** * * * ** * * ** * *
1604406 AGAAAAACATCAATATCGTGTATCCTAATGAAAAGACTATGTTTATGGCCCCAATC-ATGAAA-A
433 ACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCAATCTTTTAAAGA
* * * * ** ** * ** * *
1604469 ATTGGAGATTATTACAACAATCCA-AATTCGTGTTATTTGAA-GGACGAACTTTGATTCTATCG-
498 A-TGGAGACTGTTACGAGAATTGATGCTT-GTCTTATTT-AAGGGATAAACTTTGATTTTA-AGT
* * * * ** * * * * *
1604531 AAAAT-GATGAAAAGAAAAGGTTCTTTTATGGC---ACCAAAGCCTTAATGTC-TTGTCTCCTAA
559 AAAATAG-GGCAAAGAAAA-GAT-TTTCAT-GCAAAAGAAAATCATCAATATCATT-TATCCTAA
* * * * * * ** * *
1604591 AGATGGTA-ACACGT-TTT-T-GCTTCCCAATCTCGAAATGAATGAAGAAAATTACAAGAATCTA
619 TGA-GG-AGA-ATGTGTTTATAG-TGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * * * * * * ** *
1604652 TATTGGTCTCATTTTTG-GGGATGAACTTTGATTTTA-AGGAAAATGGGTCAAAGAAAAA-CTTT
680 TGTTTGTCTCA--TTTGAGGCACGAACTTAGACTTTACA--AAAATTGGT--GGGAAAAAGCCTT
* * * * * ** * *** * * *
1604714 TCTTGAGACATCAAAGCAACAATATCTTGTATTGTAGTGGGGAGAAC-ATATTTGTAGTGCCTAA
739 TCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAAAG-ACTATGTTTATGGTGCCTAA
* ** * * * ** * *** * * ** *
1604778 TCGTTAGCAG-ATGGAGA-TGGTTATGACAACCCA-TGGTTGTCGCCTTTGAAGGATGAACATTG
803 TC-TGAAAAGAATGGGGATTTG-TATGACTA-TTATTGTTTGTCTTATTTAAAAGACAAACTTTG
* * ** * *
1604840 ATTCTATAAAAAACGATGGAAAGAAAAGC-TTTCTTTGAAACACCAAAGCATCAATGTTATGCAT
865 ATTCGATCAAAAACGATGGAAAGAAAAGCTTTTC-TTGCGACACCAAAGCATCAATGTCATGTAT
* * * *
1604904 TCTAACGAAGAGAATGTGT
929 CCTAATGAAGGGAATATGT
* ** * * * * *
1604923 TTTTAGTTCCCAATCTTGAAAAGAATTGAGACTATTACGAGAATCGATGCTTGTCTTATTTAAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
* * * * * * *
1604988 GATGAACTTTTATTTTATGAAAAATAGGGCAAAGAAAAGATTTTCATGTAAAAGAAAATCATCAG
66 GATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCAA
* * * ** * *
1605053 TATCATTTACCCTATTGA-GAGAATGTGTTTATAATGCCGGATCACAAAATGAATTAAGATCATT
131 TATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGATCATT
* * * * * * *
1605117 ACTGGAATCCTTGTTTGTCTCATTT-AGAGCA-TACACTTAGACTTTACAAAAATTGCTG-GTAC
195 ACTAGAACCCATGTTTGTCTCATTTGAG-GCACGA-ACTTAGACTTTATAAAAATTGGTGCG-AA
* * * * *
1605179 AAATGCCTTTCTTGTGAAACCAAACCATCAATATCGTGTATCATTATGAGAAGACTATGTTTATG
257 AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATG
* * * *
1605244 G-GCCTTAATCTTGAAAAGTATAGGGATTAGTATGACTATTACTGTTTGTCTTATTTGATAGACA
322 GTGCC-TAATCTTGAAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTCTTATTTAAGAGACA
*** **
1605308 AACTTTGATTCGATCAAAAACCATGGAAAGAAATTCTTTTCTTGCGACACCAAAGCATCAATGTC
385 AACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC
* * * ** *
1605373 ATGTATCCTAACGAAGGGAATATGTTTTTGGTTCCTAATCTTTTAAGGAATGGTGACAATTGCGA
450 ATGTATCCTAATGAAGGGAATATGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTGTTACGA
* * * * * * * *
1605438 GAATCGATTCTTCTCTTTTTTAAGGGATAAACTTTGATTTCAATTAAAATTA-GGTAAAGAAAAT
514 GAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAA-TAGGGCAAAGAAAAG
* * * *
1605502 ATTTCCATCCAAAAGAAAATCATCAATATCATTTATTCTAATGAGGAGAATATGTTTATAGTGCC
578 ATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCC
* *
1605567 TAATAACAAAATGAATGAAGATCATTGCTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTA
643 TAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTA
* ** * * * * ** ** *
1605632 GACTTTACAAAAGTTGGTGTTAAAGAAACCCTTATTGCAAAATGAAAGGGTCAATATAATGTATC
708 GACTTTACAAAAATTGGTGGGAAA-AAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATC
** * * *
1605697 CTAATGGGATGACTATGTTTATGGTGCCTAAGCGTGAAAAGAATGGGGATTTGTATGACTATTAA
772 CTAATGAAAAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATGACTATTAT
* *
1605762 TGTTTGTCTT-TTTAAAGAGACAAACTTTGATT-GAATAAAAAACGGA-GGAAAGAAAAACTTTT
836 TGTTTGTCTTATTTAAA-AGACAAACTTTGATTCG-ATCAAAAAC-GATGGAAAGAAAAGCTTTT
* *
1605824 CTTGCGACACCAAAGCATCAATGTCATGTAACCTAATGAAGGGAATGTGT
898 CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * * * * * * * *
1605874 TTTTGGTTCCTAATTTTTTAAAAAATGGAGACTGTTACGAGAATCAATTCTTGCCTTGTTTAAAG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
* * * * * *
1605939 GATGAACTTTGATTTTCAGAAAAATAGGGTAAAGAAAAGATTTCTATGAAAAAGAAAATCATCAA
66 GATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCAA
* * * * *
1606004 TATCATTTAACCTAATGAGGAGAATTATTTATAGTGCCGAATCACATAACGTATGAAGATCATT-
131 TATCATTTATCCTAATGAGGAGAATTGTTTATAGTGCCTAATCACATAATGAATGAAGATCATTA
* * * * * * *** *
1606068 TTCGGAACCCATGTTTGTCTTATTTGAGGCACAAACTTATACTTTGTAGCGATTGGTGCGAGAAA
196 CT-AGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAAAA
* * *
1606133 AGCCTTTCTTGTGAAACCAAGGCATCAATATCGTGCATCCTAATGAGAAGACTATGTTTATGGTG
260 AGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGTG
* * * *
1606198 CCTAATCTTGAAAAGAATGGGGATTAGTGTGACTATTCATGTTTGTCTTATATATGACACAAACT
325 CCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTCTTATTTAAGAGACAAACT
* * * * * *
1606263 TTGATTCTATCAAAAATGGTGGAAGGAAAAGCTTTTCTTACGATACCAAAACATCAATGTCAAGT
389 TTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * ** *
1606328 ATCCTAATGAAGGGAATGTGTTTTTTGTTCCAATCTTGAAAAGAATGGAGACTATTACGAGAATT
454 ATCCTAATGAAGGGAATATGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTGTTACGAGAATT
* * * * * *
1606393 AATGATTGTCGTATTTTAA-GGA-AGAACTTTGATTTCAAGGAAAATAAGGCAAAGAAAAGATTT
519 GATGCTTGTCTTA-TTTAAGGGATA-AACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTT
* * * *
1606456 TCATGCAAAAGAAAATCTTCAATATCATTTATCCTAATAAGGAGAATATGTTTATAGCGCCTAAT
582 TCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAAT
* * * * *
1606521 CACATAATGAATGAAGATCATTACTAGAACCCTTGTTTGGCTCATTTGAGGCATGAACTTAGACT
647 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACT
* * * * ** * * * **
1606586 TTATAGAATTTGGTGGGAATAAAGCTTTTCTTATGAAACCAAGGCATCAATGTCGTGTATCCTTG
712 TTACAAAAATTGGTGGGAA-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * *
1606651 TGAAAAAACTATGTTTATGGTGCC---TCCGAAAAAGAATGGGGATTAGTATGACTCTTATTGTT
776 TGAAAAGACTATGTTTATGGTGCCTAATCTG-AAAAGAATGGGGATTTGTATGACTATTATTGTT
* *
1606713 TGTCTTATTTAAAAGACAAACTTTAATTCGATCAAAAACGATGGAAAGAAAAGCATTTCTTGCGA
840 TGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACGATGGAAAGAAAAGCTTTTCTTGCGA
*
1606778 CACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAAATGT
905 CACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * * * *
1606821 TTTTGGTTCCCAATCTTTTAAAAAATGGTGACTATTATGAGAATCGATGCTTGTCTTCTTTAAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
* **** * *
1606886 AATAAACTTTGATTTTTTTTTTAAAATAGGGCAAAGAAAATATTTCCAAGCAAAAGAAAATCT-T
66 GATAAACTTTGA--TTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAAT-TAT
* * * * * *
1606950 TAATATCATTTATCC---TCAGGAG---T-TTGA-A-TG--T-GTCACAAAATGAATGAACATCA
128 CAATATCATTTATCCTAATGAGGAGAATTGTTTATAGTGCCTAATCACATAATGAATGAAGATCA
* * * * *
1607003 TTACTAGAATCCATGTTTGTCTCCTTTAAGGCACGAACTTAGACTTTACAAAAATTGGTG-GTAG
193 TTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCG-AA
* * * * * * *
1607067 AAATGCCTTTCTTGTGAAACCAAACCATCAATATCATGTATCCTAATAAGAAAACT-TGTTTATC
257 AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATG
* * * * * * *
1607131 GTGGCTAATCTTGAAAAGAATGAGGATTTGTATGACTAGTAATGTTTATGTTGTTTAAGAGACAA
322 GTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTA-TTATGTTTGTCTTATTTAAGAGACAA
* * * *
1607196 ACTTCGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAGTGTCG
386 ACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
* * * * * * * * *
1607261 CGTATCCTAATAAAGGAAATGTATTTTTGGTTTGCAATCTTTTAAAGAGTGGAGGCTGTTACAAG
451 TGTATCCTAATGAAGGGAATATGTTTTTGG-TTCCAATCTTTTAAAGAATGGAGACTGTTACGAG
* * * *
1607326 AATTGATTCTTGTCTTATTTAAGGGGTGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGAT
515 AATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGAT
* * * *
1607391 TTCCACAG-AAAAGAAAATCATCAATATCATTTATCCTAATAAGGAGAACGTGTTTATAGTGCCT
580 TTTCA-TGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCT
* * * * * * *
1607455 AGTCACAAAATGAATGAAGATCATTACTGGAACCCAT-CTTATCTCATTAGAGGCATGAACTTAG
644 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAG
* * * * * * * * *
1607519 ACTTTGCAGAATTTAGTGTGAAAAAAACCTTTCTTGTGAAACCAAGGCAACAATATCATGTA-CC
709 ACTTTACAAAAATTGGTG-GGAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC
* * * * *
1607583 ATTATGAGAATACTATGTTTATGG-GTCCTAATCTTGAAAAGTATGGGGATTAGTATGACTATTA
773 -TAATGAAAAGACTATGTTTATGGTG-CCTAATC-TGAAAAGAATGGGGATTTGTATGACTATTA
* * * * *
1607647 ATGTTTGTCTTATTTGAGAGA-AAACTTTGATTTGATCATAAA-GCATGGAAAGAAAAGCTTTTC
835 TTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACG-ATGGAAAGAAAAGCTTTTC
* *
1607710 TTGTGACACCAAAGAATCAATGTCATGTATCCTAATGAAGGGAATATGT
899 TTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* ** * * * *
1607759 TTTTGGTTCCTAATCTTTTAGTGAATGGTGACTATTACA-AGAATCGATTCTTCTCTTATTTAAG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTA-AGAGAATCAATGCTTGTCTTATTTAAG
** *
1607823 GGATAAACTTTGATTTTAATTAAAATAGGGTAAAGAAAAGATTTCCATGCAAAA-AAAATTTATC
65 GGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA-TTATC
* * * *
1607887 AATATCATTTATCCTAATGCGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGGTTA
129 AATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGATCA
** * * * * * *
1607952 TTACTAGAGTCCATGTTTGCCTCATTTGAGGCATGAATTTAGACTTTACAAAAATTGGCGGGAAA
193 TTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAA
*
1608017 AAAG-CTCTTCTTGCAAAACCAAAGCATCAATAT-GATGTATCCTAATGAGAAGACTATGTTTAT
258 AAAGCCT-TTCTTGCGAAACCAAAGCATCAATATCG-TGTATCCTAATGAGAAGACTATGTTTAT
* * * * * * *
1608080 GGTGCCTAACCCTAAAAAAAATGGGGATTTGTATGGCTATTAATGTTTGTCGTT-TTTAGGAGAC
321 GGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTC-TTATTTAAGAGAC
* * *
1608144 AAACTTTGATTCAATCAAAAGTGGTGGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATGT
384 AAACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGT
* * * *
1608209 CATGTATCCTAATGAAGGGCATGTGTTTTTGGTTCCTAATCTTTTAAAGAATGGAGACTATTACA
449 CATGTATCCTAATGAAGGGAATATGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTGTTACG
** * * * * *
1608274 AGAATCAATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAAATAGGGTAAAGAGAA
513 AGAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAG-TAAAATAGGGCAAAGAAAA
* * * * *
1608339 GATTTACATGCAAAAAAAAATCATCAATATCATTTATCCTAATGAGAAGAAT-CGTTTATAGTGA
577 GATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGC
* * * ** * * * * *
1608403 CTAATGACATAATGAGTGAAGATC-TTTGTCGGAAACCATATTTGTATCATTTGAGGCACAAACT
642 CTAATCACAAAATGAATGAAGATCATTACT-AGAATCCATGTTTGTCTCATTTGAGGCACGAACT
* * * * * *
1608467 TATACTTTATAAAAAGTGGTGCAGAAAAAGCCTTTCTTGCGAAACCAAGGAATCAATATCATGTA
706 TAGACTTTACAAAAATTGGTG-GGAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTA
* * * * * *
1608532 TTCTAA-CAAGAAGACTATGTTTATGGTGCCTAATCTTAAAAAGAATAGGGATTAGTATTACTAT
770 TCCTAATGAA-AAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATGACTAT
* * ** * *
1608596 TGATT-TTTGTCTTATATAAGACG-CAAACTTTGATTATATCAAAAA-TAGTGGAAGGAAAAGCT
833 T-ATTGTTTGTCTTATTTAA-AAGACAAACTTTGATTCGATCAAAAACGA-TGGAAAGAAAAGCT
* * * *
1608658 TTTCTTGTGACA-CAAAACATCAATGTCAAGTATCCTAATGAAGGGAATGTGT
895 TTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * ** * * ** * * * * *
1608710 TTTTCGTT-CCAATATTGAAAAGAATGGAGACTATTACCAGAATTAGTGATTGTCTAATTTTAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
* * * * *
1608774 GA-AGAACTTTGATTTCAAGGAAAATAAGGCGAAGAAAAGATTTTCATGCAAAAGAAAATCT-TC
66 GATA-AACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAAT-TATC
* * * *
1608837 AATACCACTTATCCTAATGAGGAGAATATGTTTATAGCGCCTAATCACATAATGAATGAAGATAA
129 AATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGATCA
** * * * ** ** * * *
1608902 TTACCGGAACTCGTGTTTGTCTCGTTTGAGGCATTAACTTAGACTCCATAAAATTTGGTGGGAAT
193 TTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAA
** * * ** * *
1608967 AAAGATTTTCTTGCCAAACCAAGGCATCAATATCGTGTATCCTTGTGAAAAAACTATGTTTATGG
258 AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGG
* * * *
1609032 TGCCTAATCCTAAAAAGAATAGGGATTAGTATGACTATTATTGTTTGTCTTATTTAACAGACAAA
323 TGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTCTTATTTAAGAGACAAA
* * * * * *
1609097 CTTTAATTCGATAAAAAAAGGTGGAAAGAAAAGCTTTTCTTGTGACACAAAAGCATCGATGTCAT
387 CTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* *
1609162 GTATCCTAATGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTACGAGA
452 GTATCCTAATGAAGGGAATATGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTGTTACGAGA
* ** * * * * *
1609227 ATCGACACTTGTCTTCTTTAAGCGATAAACTTTGATTTTAATTAAAATATGGTAAAGAAAAGATT
516 ATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATT
* * * *
1609292 TTCATGCAAAA-AAAATCATCAATATCATTTATCCTAAGGAAGAGAATGTTTTTATAATGCCTAA
581 TTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA
* * * ** * * **
1609356 TCAAAAAATAAATAAAGATTTTTGCTAGAATCAATGTTTGTCTCATTT-AGGGCAC-AAAATAGA
646 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGA-GGCACGAACTTAGA
* * * * * * * *
1609419 CTTTACAAAAATTGGTAGTAAAAGTGCCTGTCTTACGAAACCAAACCATTAATATCATGTATTCT
710 CTTTACAAAAATTGGTGGGAAAA-AGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCT
* * **
1609484 AATGAGAAGACTATCTTTGCGGTGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTATTG
774 AATGAAAAGACTATGTTTATGGTGCCTAAT-CTGAAAAGAATGGGGATTTGTATGACTATTATTG
** * * *
1609549 TTTGTCTTATTTAAGGGACAAACTTTGATTCGGTCAACAACGATGGAAAGAAAAGCTTTTCTTGT
838 TTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACGATGGAAAGAAAAGCTTTTCTTGC
** * *
1609614 GACACCAAAGCATCGGTGTCATGTATCCTAAAGAAGCGG-ATATGA
903 GACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GGAATATGT
* * * * *
1609659 TTTTGGTT-TCAATCTTTTAAAGAATGGTGACTATTATGGGAATCGATGCTTGTCTTATTTAAAG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTT-AAG
* * ** * * * *
1609723 GG-TAAACTTTGATATCAATTAAAATAGGGTAAAGAAAAGATTTCAAAGCAAAAGAAAATCATCA
65 GGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCA
* * * ***
1609787 ATATCATTTATCCCAAGGGGGAGAA-TG----T-GT--C----C-CATAATGAGCAAAGATCATT
130 ATATCATTTATCCTAATGAGGAGAATTGTTTATAGTGCCTAATCACATAATGAATGAAGATCATT
* * *
1609839 AGTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACACAAAATTGGTG-GAAAA
195 ACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATA-AAAATTGGTGCGAAAA
* * * *
1609903 AATGCCTTCCTTGTGAAACCAAACCATCAATATCATGTATCCTAATGAGAAGACTATGTTTATGG
259 AA-GCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGG
* *
1609968 TGCCTAATCTTGAAAAGAATGGGGATTTGTATGACT-TTAATGTTTGTCTTATTGCAA-AGACAA
323 TGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTCTTATT-TAAGAGACAA
* ***
1610031 ACTTTGATTCGATCAAAAATAGTGGAAAGAAAAGCTTTTCTTGCGACACTGTAGCATCAATGTCA
386 ACTTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
* * * * ** **
1610096 -GCTATCTTAAAGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTTACTGTTGTGA
451 TG-TATCCTAATGAAGGGAATATGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTGTTACGA
* * * *
1610160 GAATCGATGCTTGTCTTAGTGAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAG-
514 GAATTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGA
* * * * *
1610224 TTTTCCATGCAAAAGAAAATCATCAAAATCATTTATCCTGATGAGGGGAATATGTTTATGGTG-C
579 TTTT-CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCC
* * * * *
1610288 TAAATCACAAAATGAATGAAGATCATTAC-AAAATCCGTGTTTGTCTCGTTTGAGGCATGAACAT
643 T-AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTT
* * *
1610352 AGACTTTATAAAAATTGGTAGGAAAATAGCCTTTCTTGC-AACGCCAAAGCATCAATA-CGATGT
707 AGACTTTACAAAAATTGGTGGGAAAA-AGCCTTTCTTGCGAA-ACCAAAGCATCAATATC-ATGT
* * * * *
1610415 ATCATAAAGAGAAGACTATGCTTATGGTGCATAATCTTGAAAAGAATGGGGATTTGTATGACTAT
769 ATCCTAATGAAAAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATGACTAT
* * * *
1610480 TAATGTTTGTCTTATTTAAGAGACAAACATTGATTCGATCAAAAAC-AGTGGAATGAAAAGCTTT
833 TATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAACGA-TGGAAAGAAAAGCTTT
* * * * * *
1610544 TCTTGCGACACCAAAGGATCCATGTTATGTA-CCTAATGACGGGATTGTGT
897 TCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * * * * *
1610594 TTTTGGTTCCCAATCTTTTAAATAATGGGGAC-GAATACGAGAATCGATGCTTGTCTTATTTAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTG-TTAAGAGAATCAATGCTTGTCTTATTTAAG
* * *
1610658 GGATGAACTTTGATTTTAAGAAAGATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCA
65 GGATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCA
* *
1610723 ATATCATTTATCCTAATGTGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATAAAGATCAT
130 ATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGATCAT
* ** *
1610788 TACTAGAACCCATGTTTGTCTCATTTGAAGCACGAACTTAGACTTTGCAAAAATTAGTGCGAAAA
194 TACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAAA
* * * *
1610853 AAGCCTTTCTTGTGAAACCAAGGCATCAATATCATGTATCCTTATGAGAAGACTATGTTTATGGT
259 AAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGT
*** * * * *
1610918 GCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTAT-TGTTATCTTATTTAAGAGATAATC
324 GCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATGT-TTGTCTTATTTAAGAGACAAAC
* * ** * * ** *
1610982 TTCGATTCAATCAAAAACCGTGAAAAGAAAAGCTTTTCCTATGACACCAGAGCATCAATGTCATG
388 TTTGATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* * * * **
1611047 TATCCTAATGAAGGGACTATATTTTTTGTTCCCAATCTTTTAAAGAATGGTGACTGTTATAAGAA
453 TATCCTAATGAAGGGAATATGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTGTTACGAGAA
* * * * * *
1611112 TTGATGCTAGTTTTATTTAAGGGATAAACTTTGATTTAAATTAAAAAAGGGCAAAGAAAAAATTT
517 TTGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTT
* * * *
1611177 CCATGCAGAAA-AAAATCATCAATATCATTTACCCTAAGGAGGAGAATATGTTTATAGTGCCTAA
582 TCATGCA-AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA
* *
1611241 TCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAAGCACGAACTTAGAC
646 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGAC
* * * * * *
1611306 TTTGCAAAAATTAGTGCGAAAAAAGCCTTTCTTGTGAAACCAAGGCATCAATATCATGTATCCTT
711 TTTACAAAAATTGGTG-GGAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTA
* *** * *
1611371 ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTATTG-
775 ATGAAAAGACTATGTTTATGGTGCCTAATC-TGAAAAGAATGGGGATTTGTATGACTATTATTGT
* * * * * * * *
1611435 TTATCTTATTTAAGAGATAATCTTTGATTCAATCAAAAACCG-TGAAAAGAAAAGCTTTTCCTAC
839 TTGTCTTATTTAAAAGACAAACTTTGATTCGATCAAAAA-CGATGGAAAGAAAAGCTTTTCTTGC
* *
1611499 GACACCAGAGCATCAATGTCATGTATCCTAATGAAGGGACTATGT
903 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
* * ** * *
1611544 TTTTTGTTCCCAATCTTTTAAAGAATGGTGACTATTATA-AGAATTGATGCTAGTTTTATTTAAG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTA-AGAGAATCAATGCTTGTCTTATTTAAG
* * *
1611608 GGATAAACTTTGATTTAAATTAAAAA-AGGGCAAAGAAAAGATTTCCATGCAGAAA-AAAATCAT
65 GGATAAACTTTGATTTTAA-GAAAAATAGGGCAAAGAAAAGATTTCCATGCA-AAAGAAAATTAT
* * *
1611671 CAATATCATTTACCCTAAGGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
128 CAATATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGATC
* * * *
1611736 ATTACTAGAATCTATGTTTGTCTCATTTGAGGCACGGACTTAGACTTTACAAAAATTGGTG-GTA
192 ATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCG-A
* ** * * ** * *
1611800 AAAAGGGTTTTCTTGCGAAGCTAATCCATTAATATCGTGTAAT-CTAATGAGAAGACTATATTTA
256 AAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGT-ATCCTAATGAGAAGACTATGTTTA
* *
1611864 TGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTATTGTTTGTCCTATTTAAGAGAC
320 TGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTCTTATTTAAGAGAC
* * * * * * *
1611929 AAATTTTGATTCGATCAAAACA-GGTGCACAGAAAAGCTTTTCCTGCAACACCAAGGCATCAATA
384 AAACTTTGATTCGATCAAAA-ATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATG
* * * * * *
1611993 ACATGTATCCTAATAAAGGGAAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAATGGTGATTGCTA
448 TCATGTATCCTAATGAAGGGAATATGTTTTTGGTT-CCAATCTT-TTAAAGAATGGAGACTGTTA
* ** * * * *
1612057 TGAGAATCAATCCATGT-TTGATTTAAGGGATAAACTTTGACTTTAATTAAAATAGGGCAAAGAA
511 CGAGAATTGATGCTTGTCTT-ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAA
* * * * *
1612121 TAGATTTCCATGCAAAAGAAAATCATAAATATCATTTATCCTAATGAGAAAAATGTGTTTATAGT
575 AAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
* * * * * *
1612186 GCCTAATCACGAATTGAGTGAAGATCATTACTGGAACCCATGTTTGT-T-ATGTTCGAGGTACGA
640 GCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCAT-TT-GAGGCACGA
* * ** * *
1612249 ACTTGGACTTTTCAAAAATTCTTGGGAAAAAAGCCTTTCTTGCGAAACCAAATCATCAATATGAT
703 ACTTAGACTTTACAAAAATTGGTGGG-AAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * *
1612314 GTATCTTAAGGAGAAGACTATGTTTATGGTGCCTAATGGTGGAAAAGAATGGGGATTAGTATGAG
767 GTATCCTAATGAAAAGACTATGTTTATGGTGCCTAAT-CT-GAAAAGAATGGGGATTTGTATGAC
* * * * * * * *
1612379 TATTCA-TGTTTGTCTTAATTAAGAGGCAAACATTGGTT-GTATC-AAAATGGTGGAAAGGAAAG
830 TATT-ATTGTTTGTCTTATTTAAAAGACAAACTTTGATTCG-ATCAAAAACGATGGAAAGAAAAG
* * * *
1612441 TTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCATAATAAAGGGAATGTGT
893 CTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
** ** * * *
1612496 TTTTGGTT-TTAATCTTGAAAAGAATGGAGACTGCTACGAGAATCAATGCTTGTCTTATTTAAGG
1 TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
** * * ** **
1612560 GACGAACTTTGATTTCAAGTAAAATAGGGCAAAGAAAAGATTTTAATGCAAAAGAAAATCGTCAA
66 GATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCAA
* * * * *
1612625 TATCGTTTATCCTAATGAGGAGAATGTGTTTATGGTGCCTAATCACAAAATGAGTGAAGATCAAT
131 TATCATTTATCCTAATGAGGAGAAT-TGTTTATAGTGCCTAATCACATAATGAATGAAGATCATT
* * * * *
1612690 -CATAGAATCCACGTTTATCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTG-GGAAA
195 AC-TAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAAA
* * * *
1612753 ATGCCTTTCTTGCGAAAGCAAAACATCAATATCGTGTATCCTAATGAAAAGACTATGTTTATGG
259 AAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGG
1612817 CCCCAATCAT
Statistics
Matches: 29981, Mismatches: 6409, Indels: 3592
0.75 0.16 0.09
Matches are distributed among these distances:
920 39 0.00
921 11 0.00
922 13 0.00
923 57 0.00
924 56 0.00
925 92 0.00
926 41 0.00
927 2 0.00
928 33 0.00
929 121 0.00
930 98 0.00
931 206 0.01
932 409 0.01
933 344 0.01
934 249 0.01
935 928 0.03
936 1210 0.04
937 471 0.02
938 487 0.02
939 461 0.02
940 54 0.00
941 228 0.01
942 281 0.01
943 266 0.01
944 570 0.02
945 884 0.03
946 1345 0.04
947 2361 0.08
948 3329 0.11
949 4509 0.15
950 4157 0.14
951 3023 0.10
952 1038 0.03
953 1278 0.04
954 438 0.01
955 251 0.01
956 86 0.00
957 10 0.00
958 123 0.00
959 284 0.01
960 88 0.00
961 50 0.00
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.32
Consensus pattern (947 bp):
TTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTAAGAGAATCAATGCTTGTCTTATTTAAGG
GATAAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCAA
TATCATTTATCCTAATGAGGAGAATTGTTTATAGTGCCTAATCACATAATGAATGAAGATCATTA
CTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGCGAAAAAA
GCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGTGC
CTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATGTTTGTCTTATTTAAGAGACAAACTTT
GATTCGATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTAT
CCTAATGAAGGGAATATGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTGTTACGAGAATTGA
TGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTTCAT
GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACA
AAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
AAAAATTGGTGGGAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAA
AGACTATGTTTATGGTGCCTAATCTGAAAAGAATGGGGATTTGTATGACTATTATTGTTTGTCTT
ATTTAAAAGACAAACTTTGATTCGATCAAAAACGATGGAAAGAAAAGCTTTTCTTGCGACACCAA
AGCATCAATGTCATGTATCCTAATGAAGGGAATATGT
Found at i:1576440 original size:475 final size:475
Alignment explanation
Indices: 1573674--1612816 Score: 13738
Period size: 474 Copynumber: 82.7 Consensus size: 475
1573664 GTTTTCATCA
* * * * * *
1573674 AATGTGCTTTTGG-TTCCAATCTTTTAAAGAATGGAGACTGTTACAAGAATCAATTCTTGTTTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* *
1573738 TTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* * * * *
1573803 TTATCAATATCATTTATCGTAATGA-GAGAACGTGTTTATAGTTCCTAATCACATAATGAATGAA
131 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
* * ** *
1573867 GATCATTACT-GAAACGCATGTTTGTCTCATTTAAGGCACGAACTTAGACTTTGTAGAAATTGGT
196 GATCATTACTAGAATC-CATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* * * * * *
1573931 GCGAAAAAATCCTTTCTTGCGAAACGAAGGCATCAATATCGTGTATCATTATGAGAAGACTATGT
260 G-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGT
* * * * * * *
1573996 TTATGG-GCCTTAATCTTGAAAAGTATAGGGATTAGTAGGACTATTACTGTTTATCTTATTTGAT
324 TTATGGTGCC-TAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAG
* ** *
1574060 AGACAAACTTTGATTCTATCAAAAACCATGGAAAGAAATGCTTTTCTTGCGACACCAAAGCATCA
388 AGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
*
1574125 ATGTCATGTATCCTAACGAAGGG
453 ATGTCATGTATCCTAATGAAGGG
* * * * ** * *
1574148 AATATGTTTCTGG-TTCCTAATATTTTAAGGAATGGTGACAATTACGAGAATCGATTCTTCTCTT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * * * * *
1574212 ATTTAAGGGATAAACTTTGATTTTAATTAAAATAAGGTAAATAAAATATTTCCATCCAAAAGAAA
65 ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* *
1574277 ATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAGAATGAATGA
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
*
1574342 AGATCATTATTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
195 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* * * ** * *
1574407 GTTAAAGAAA-CCCTTCTTGCAAAACCAAAGTGTCAATATAATGTATCCTAATAAGAAGACTATG
260 G-GAAA-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATG
* * * * *
1574471 TTTATGGTGCGTAAGCGTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTT-TTTAAA
323 TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTT-AA
** * * *
1574535 GAGACAAACTTTGATTTAATAAAAAACGGAGGAAAGAAAAACTTTTCTTGCGACACCAAAGCATC
387 GAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
*
1574600 AATGTCATGTAACCTAATGAAGGG
452 AATGTCATGTATCCTAATGAAGGG
* * * * * *
1574624 AATGTGTTTTTTG-TTCCTAATTTTTTTAAA-AATGGAGACTGTTAAGAGAATCAATTCTTGTCT
1 AATGTGTTTTTGGTTTCC-AA-TCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCT
* * * * * * * *
1574687 TGTTTAAAGGATGAACTTTGATTTTCAGAAAAATAGGGTAAAGAAAAGATTTCTATGAAAAAGAA
64 TATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * *
1574752 AATTATCAATATCATTTATCCTAATGAGGAGAAT-TATTTATAGTGCCTAATCACATAATGTATG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* ** * * * * * **
1574816 AAGATCATTTCCGGAACCCA-GTTTTGTCTTATTTGAGGCACAAACTTATACTTTATAGCAATTG
194 AAGATCATTACTAGAATCCATG-TTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTG
* * * * * * * *
1574880 GTGCGAGAAAAGCCTTTCTTGTGAAACTAAGGCAACAATATCGTGCATCCCAATGAGAAGACTAT
258 GTG-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTAT
* * * * *
1574945 GTTTATGGTGCTTAGTCTTGAAAAGAA-GAGGATTAGTGTGACTATTCA-TGTTTGTCTTATATA
322 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATTGTTTGTCTTATTTA
* * * * * * * *
1575008 TGACACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGCTTTTCTTACGATACCAAAACAT
386 AGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
* *
1575073 CAATGTCAAGTATCCTAATAAAGGG
451 CAATGTCATGTATCCTAATGAAGGG
* * ** * * * * *
1575098 AATCTGTTTTTTG-TTCCAATCTTGAAAAGAATGGAGACTATTACGAGAAT-TAGTGATTGTCGT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGA-TGCTTGTCTT
* * * *
1575161 ATTTTAA-GGA-AGAACTTTGATTTCAAGGAAAATAAGGCAAAGAAAAGATTTTCATGCAAAAGA
65 A-TTTAAGGGATA-AACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
* * * * *
1575224 AAATCTTCAATATCATTTATCCTAATAAGGAGAATATGTTTATAGCGCCTAATCACATAATGAAT
128 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * * * * *
1575289 GAAGATCATTACTAGAACCCTTGTTTGTCTCATTTGAGGCACGGACTTAGACTTTATAGAATTTG
193 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTG
* * ** * * ** ** * *
1575354 GTGGGAATAAAGCTTTTCTTATGAAACCAAGGCATCAATGTTGTGTATCCTTGTGAAAAAACTAT
258 GT-GGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTAT
* * *
1575419 GTTTATGGTGCCTAATC-CGAAAAAGAATGGAGATTAGTATGACTCTTATTGTTTGTCTTATTTA
322 GTTTATGGTGCCTAATCTTG-AAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTA
* * * *
1575483 AAAGACAAACTTTAATTCGATCAAAAACGATGGAAAGAAAAGCATTTCTTGCGACACCAAAGCAT
386 AGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
1575548 CAATGTCATGTATCCTAATGAAGGG
451 CAATGTCATGTATCCTAATGAAGGG
** * * * * *
1575573 AAAATGTTTTTGGTTCCCAATCTTTTAAAAAATGGTGACTATTATGAGAATCGATGCTTGTCTTT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* *** * *
1575638 TTTGAGGGATAAACTTTGATTTTTTTTTAAAATAGGGCAAAGAAAAGATTTCCAAGCAAACGAAA
66 TTTAAGGGATAAACTTTGA-TTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* * *
1575703 ATCATTAATATCATTTATCCTCA--A-GAG--T-TAG---A-A-TG--T-GTCACAAAATGAATG
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGT-GTTTATAGTGCCTAATCACAAAATGAATG
* ** *
1575754 AACATCATTACTAGAATCCATGTTTGTCTTTTTTAAGGCACGAACTTAGACTTTACAAAAATTGG
194 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * * * *
1575819 TGGTAGAAATGCCTTTCTTGTGAAACCAAACCATCAATATCATGTATCCTAATGAGAAAACT-TG
259 TGG-AAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATG
* * * * * * * *
1575883 TTTATCGTGGCTAATCTTGAAAAGAATGAGGATTTGTATGCCTACTAATGTTTGTCTTGTTTAAG
323 TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAG
*
1575948 AGACAAACTTCGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
388 AGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
* * *
1576013 GTGTCACGTATCCTAATGAAGGA
453 ATGTCATGTATCCTAATGAAGGG
* * * * * * * * *
1576036 AATGTATTTTTGGTTTGCAATCTCTTAAAGAGTGGAGACTGTGACAAGAATTGATTCTTGTCTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * *
1576101 TTTAAGGGGTGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCACGCAAAAGAAAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* * *
1576166 TCATCAATATCATTTATCCTAATGAGGAGAACGTGTTTATAGTGCCTAGTCACAAAAAGAATGAA
131 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
* * * * * * * * * *
1576231 TATCATTACTGGAACCCATGTTTATCTCATTAGAGGCATGAACTTAGACTTTGCAGAATTTAGTG
196 GATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTG
* * * * *
1576296 TGAAAAAAACCTTTCTTGTGAAACCAAGGCATCAATATCATGTA-CCATTATGAGAATACTATGT
261 -GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC-TAATGAGAAGACTATGT
* * *
1576360 TTATGG-GTCCTAATCTTGAAAAGTATGGGGATTAGTATGACTATTATTGTTTGCCTTATTTGAG
324 TTATGGTG-CCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAG
* *
1576424 AGA-AAACTTTGATTCGATCACAAA-GCATGGAAAGAAAAG-TTTTCTTGCGACACCAAAGCATC
388 AGACAAACTTTGATTCGATCAAAAACG-GTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
1576486 AATGTCATGTATCCTAATGAAGGG
452 AATGTCATGTATCCTAATGAAGGG
* * ** * * * * *
1576510 AATATGTTTTTGGTTCCCAATCTTTTAGGGAATGGTGACTATTACAATAATCGATTCTTCTCTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * *
1576575 TTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGTAAAGAAAAGATTTCCATGCAAAAAAAAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* * * *
1576640 TTATGAATATCATTTATCCTAATGCGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAA
131 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
* * * * *
1576705 GATCATTACTAGAGTCCATGTTTGCCTCATTTGAGGCATGAATTTAGACTTTACAAAAATTGGCG
196 GATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG-T
* * * *
1576770 GGAAAAAAG-CTCTTCTTCCAAAACTAAAGCATCAATATGATGTATCCTAATGAGAAGACTATGT
260 GGAAAAAAGCCT-TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGT
* * * * * * *
1576834 TTATGGTGCCTAACCCT-AAAAAAATGGGGATTTGTATGGCTATTAATGTTTGTCATT-TTTAGG
324 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTC-TTATTTAAG
* ** * *
1576897 AGACAAACTTTGATTCAATCAAAAGTGGAGGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCA
388 AGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
1576962 ATGTCATGTATCCTAATGAAGGG
453 ATGTCATGTATCCTAATGAAGGG
* * * * * *
1576985 AATGTATTTTTGG-TTCCTAATCTTTTAAAGAATGGAGACTATTACAAGAATCAATTCTTGTCTT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * * * * *
1577049 ATTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGGTAAAGAGAAGATTTACATGCAAAAAAAA
65 ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* * * * * *
1577114 ATCATCAATATCATTTATCCTAATGAGAAGAAT-CGTTTATAGTGACTAATGACATAATGAGTGA
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
* * ** * * * * * * * * *
1577178 AGATCTTTGCCGGAAACCATATTTGTATCATTTAAGGCACAAACTTATACTTTATAGAAAGTGGT
195 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* * * * * **
1577243 GCAGAAATAGCCTTTCTTGCGAAACCAAGGAATCAATATCATGTATTCTAACAAGAAGACTATGT
260 GGA-AAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGT
* * * * *
1577308 TTATGGTGCCTAATCTTAAAAAGAATAGGGATTAGTATTACTACTGATT-TTTGTCTTATATAAG
324 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTA-TTATTGTTTGTCTTATTTAAG
** ** * * *
1577372 ACG-CAAACTTTGATTATATCAAAAATAGTGGAAGGAAAAGCTTTTCTTGTGACA-CAAAACATC
388 A-GACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
*
1577435 AATGTCAAGTATCCTAATGAAGGG
452 AATGTCATGTATCCTAATGAAGGG
* * ** * * * * * *
1577459 AATGTGTTTTTCG-TTCCAATCATGAAAAGAATGGAGACTATTACTAGAAT-TAGTGATTGCCTT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGA-TGCTTGTCTT
* * * * *
1577522 ATTTTAGGGA-AGAACTTTGATTTCAAGGAAAATAAGGCAAAGAAAAGATTTTCATGCAAAAGAA
65 ATTTAAGGGATA-AACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * * * * *
1577586 AATCTTCAATACCACTTATCCTAATGAGGAGAATATGTTTATAGCGCCCAATCACATAATGAATG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
** * * * * *
1577651 AAGATCATTACCGGAA-CTCATGTTTGTCTCATTTGAGGCATGAACTTAGACTCTATAGAATTTG
194 AAGATCATTACTAGAATC-CATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTG
* * * * * ** * *
1577715 GTGGGAATAAAG-ATGTTCTTGCCAAACCAAGGCATCAATATCGTGTATCCTTGTGAAAAAACTA
258 GT-GGAAAAAAGCCT-TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTA
* * *
1577779 TGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTAAGACTATTATTGTTTGTCTTATTTA
321 TGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTA
* * * ** **
1577844 ACAGACAAACTTTAATTCGATAAAAAAATGTGGAAAGAAAAGCTTTTCTTGTTACACCAAAGCAT
386 AGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
*
1577909 CGATGTCATGTATCCTAATGAAGGG
451 CAATGTCATGTATCCTAATGAAGGG
** * * ** *
1577934 AAAATGTTTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATTGACACTTGTCTTC
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * * *
1577999 TTTAAGCGATAAACTTTGATTTTAATTAAAATATGGTAAAGAAAAGATTTTCATGCAAAA-AAAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* * * * * * *
1578063 TCATCAATATCATTTATCCTAAGGAAGAGAATGTTTTTATAATGCCTAATCAAAAAATAAATAAA
131 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
** * *
1578128 GATTTTTGCTAGAATCCATGTTTGTCTCATTT-AGGGCACAAACTTAGACTTTACAAAAATTGGT
196 GATCATTACTAGAATCCATGTTTGTCTCATTTGA-GGCACGAACTTAGACTTTACAAAAATTGGT
* ** * * * * * *
1578192 AGTAAAAGTGCCTGTCTTACGAAACCAAACCATTAATATCATGTATTCTAATGAGAAGACTATCT
260 -GGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGT
** * * * * *
1578257 TTGCGGGGCTTAATCCTGAAAAGAATGGGGATTTGTATGACTATTATTGTTTGTCTTATTTAAGG
324 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAGA
* * * * **
1578322 GACAAACTTTGATTCGGTCAACAACGATGGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCGG
389 GACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAA
*
1578387 TGTCATGTATCCTAAAGAAGGG
454 TGTCATGTATCCTAATGAAGGG
* * * *
1578409 AATATGATTTTGGTTT-CAATCTTTTAAAGAATGGTGACTGTTATGGGAATCGATGCTTGTCTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * * * *
1578473 TTTAAGGGGTAAACTTTGATATCAACTAAAATAGGGTAAAGAAAAGATTTCCAAGCAAAAGAAAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* ***
1578538 TCATCAATATCATTTATCCTAA-GAGGGAGAA--TG----T-GT--C----C-CATAATGAGCAA
131 TCATCAATATCATTTATCCTAATGA-GGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
*
1578588 AGATCATTAGTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
195 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* * * * * *
1578653 GGAAAAAATGCCTTCCCTGTGAAACCAAACCATCAATATCATGTATCCTAATGAGAAGATTGTGT
260 GGAAAAAA-GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGT
* * *
1578718 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACT-TTAATGTTTGTCTTATTGCAA-
324 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATT-TAAG
** * *
1578781 AGACAAACTTTGATTCGATCAAAAATAGTGGAAAGAAAAGCTTTTCTTGCGACACTATAGCATCA
388 AGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
*
1578846 ATGTCA-GCTATCCTAAAGAAGGG
453 ATGTCATG-TATCCTAATGAAGGG
** * * * ** *
1578869 AAAATGTTTTTGGTTCCCAATCCTTTT-AAGAATAGTTACTGTTGTGAGAATCGATACTTGTCTT
1 AATGTGTTTTTGGTTTCCAAT-CTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * * *
1578933 AGTGAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAGTTTTCCATGCAAAAGAAA
65 ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* * * *
1578998 ATCATCAAAATCATTTATCCTGATGAGGGGAATGTGTTTATGGTG-CTAAATCACAAAATGAATG
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCT-AATCACAAAATGAATG
* * ** *
1579062 AAGATCATTAC-AAAATCCGTGTTTGTCTCATTTGAGGCTTGAACATAGACTTTACAAAAATTGG
194 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * * * *
1579126 TAGGAAAAGAGCCTTTCTTGC-AACGCCAAAGCATCAATATGATGTATCGTAAAGAGAAGACTAT
259 T-GGAAAAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTAT
* * * * *
1579190 GCTTATGGTGCATAATCATGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAA
322 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAA
* ** *
1579255 GAGACAAACATTGATTCGATCAAAAAAAGTGGAATGAAAAGCTTTTCTTGCGACACCAAAGCATC
387 GAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
* * *
1579320 CATGTTATGTA-CCTAATGACGGG
452 AATGTCATGTATCCTAATGAAGGG
* * * * *
1579343 ATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGGGAC-GAATACGAGAATCGATGCTTGTCTT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTG-TTACGAGAATCGATGCTTGTCTT
* * * *
1579407 ATTTAGGGGATGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCATAAGAAA
65 ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* * * *
1579472 ATTATCAATATCA-TTATCCTAATGTGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATAA
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
* * * * * * *
1579536 AGATCATTACTAGAACCCATATTTGTCTCATTTGAAGCATGAACATAGACTTTATAAAAATTAGT
195 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* *
1579601 GCGAAAAAAGCCTTTTTTGCGAAACCAAGGCATCAATATCATGTATCCCT-ATGAGAAGACTATG
260 G-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTAT-CCTAATGAGAAGACTATG
*** * *
1579665 TTTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTATTG-TTATCTTATTTAAG
323 TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAG
* * * * * * * * * *
1579729 AGATAATCTTTGATTCAATCAAAAACCGTGAAAAGAAAAGCTTTTCCTACAACACTAGAGCATCA
388 AGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
1579794 ATGTCATGTATCCTAATGAAGGG
453 ATGTCATGTATCCTAATGAAGGG
* * * * * * * * * *
1579817 ACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGTGACTGTTATGAGAATTGATGCTAGTTTTT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * *
1579882 TTTAAGGGATAAACTTTGATTTAAATTAAAAAAGGGCAAAGAAAAGATTTCCATGCAGAAA-AAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCA-AAAGAAA
* * *
1579946 AACATCAATATCATTTACCCTAA-GAAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATG
130 ATCATCAATATCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* *
1580010 AAGATCATTACTAGAATCTATGTTTGTC-CAATTTGAGGCACGGACTTAGACTTTACAAAAATTG
194 AAGATCATTACTAGAATCCATGTTTGTCTC-ATTTGAGGCACGAACTTAGACTTTACAAAAATTG
* ** * * ** *
1580074 GTGGTAAAAAGGGTTTTCTTGCGAAGCTAATCCATTAATATCGA-GTAAT-CTAATGAGAAGACT
258 GTGG-AAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATC-ATGT-ATCCTAATGAGAAGACT
* * *
1580137 ATATTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTATTGTTTGTCCTATTT
320 ATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTT
* * * * * * *
1580202 AAAAGACAAATTTTGATTCGATC-AAAACAGGTGCACAGAACAGCTTTTCTTGCAACACCAAGGC
385 AAGAGACAAACTTTGATTCGATCAAAAAC-GGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGC
** *
1580266 ATCAATAACATGTATCCTAATAAAGGG
449 ATCAATGTCATGTATCCTAATGAAGGG
** * * * * * * *
1580293 AAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAATGGTGATTGCTATGAGAATCAATCCATGT-TT
1 AATGTGTTTTTGGTTTCCAATCTT-TTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * *
1580356 GATTTAAGGGATAAACTTTGACTTTAATTAAAATAGGGCAAAGAATAGATTTCCATGCAAAAGAA
65 -ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * * *
1580421 AATCATAAATATCATTTATTCTAATGAGAAGAAGGTGTTTATAGTGCCTAATCACGAAATGAATG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * ** * * * **
1580486 AAGATCATTACTGGAACCCATGTTTGTCTTGTTCGAGGTACGAACTTAGACTTTTCAAAAATTCT
194 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * * *
1580551 TGGGAAAAAAGCCTTTCTTGCGAAACCAAATCATCAATATGATGTATCTTAAGGAGAAGACTATG
259 T-GGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATG
** * * *
1580616 TTTATGGTGCCTAATGGTGAAAATGAACGGGGATTAGTATGAGTATTCA-TGTTTGTCTTAATTA
323 TTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTATGACTATT-ATTGTTTGTCTTATTTA
* * * * * *
1580680 AGAGGCAAACTTTGGTTCTATCAAAAATGGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAGCAT
386 AGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
* * *
1580745 TAATGTCATGTATCATAATAAAGGG
451 CAATGTCATGTATCCTAATGAAGGG
** * * *
1580770 AATGTGTTTTTGG-TTCTCAATCTTGAAAAGAATGGAGACTGTTATGAGAATCAATGCTTGTCTT
1 AATGTGTTTTTGGTTTC-CAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * **
1580834 ATTTAAGGGATGAACTTTGATTTCAAGTAAAATAGGGCAAAGAAAAGATTTTAATGCAAAAGAAA
65 ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
** * *
1580899 ATTGTCAATATCGTTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAGTGA
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
* * * * * *
1580964 AGATCACT-CATAGAATCCACGTTTATCTCATTTGAGGCATGAACTTAGAATTTAAAAAAATTGG
195 AGATCATTAC-TAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * * * * *
1581028 TGGGAAAATGCCTTT-TTGCGAAAGCAAAACATCAATATCGTGTATCCTAATGAAAAGACTATGT
259 TGGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGT
* * * * * * ** * * ** * *
1581092 TTATGG-CCCCAATCATGAAAA-ATTGGAGATTATTACAACAATCCA-AATTCGTGTTATTTGAA
324 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTAT-TATTGTTTGTCTTATTT-AA
* * * * * * * * *
1581154 G-GACGAACTTTGATTCTATCGAAAATGATGAAAAGAAAAGGTTCTTTTATG-G-CACCAAAGCC
387 GAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTT-TTCT-TGCGACACCAAAGCA
* * * * * *
1581216 TTAATGTCTTGTCTCCTAAAGATGGT
450 TCAATGTCATGTATCCTAATGAAGGG
*** * * ** ** ** * * * *
1581242 AACACGTTTTTGCTTCCCAATC-TCGAAATGAATGAAGACAATTACAAGAATCTAT-ATTGGTGT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAA-GAATGGTGACTGTTACGAGAATCGATGCTT-GTCT
* ** * * * * * * * *
1581305 CATTTGGGGGATGAACTTTGATTTTAAGGAAAAT-GGGTCAAAGAACA-CTTTTCTTG-AGACAT
64 TATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGG-CAAAGAAAAGATTTCCATGCA-AAAG
* * * * * ** * * * ** * * ** **
1581367 CAAAGCAACAATATCGTGTATTGTAGTGGGGAAAACATATTTGTAGTGCCTAATCGTTAGCA-G-
127 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGA
* ** * * * * * * * *
1581430 ATGGAGATGGTTA-TGACAACCCATGGTGGTCGCCTTTGAAGG-ATGAACATT-GA-TTCTATAA
191 ATGAAGATCATTACT-AGAATCCATGTTTGTCTCATTTG-AGGCACGAAC-TTAGACTT-TACAA
** * * * * * * * *
1581491 AAAACGGTGGAAAGAAAAGCTTTTTTTG-AAACACCAACGCATCAATGTTATGCATCCTAACGA-
252 AAATTGGTGG-AA-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATGAG
* * * * * * * * * * * ** * * *
1581554 AGTGAATGTGTTTTTAGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGT
314 A-AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGT
* ** * ** * * * * * * *
1581619 CTTATTTAAGGGATGAACTTTTATTTTATGAAAAATAGG-GCAAAGAAAAG-ATTTCAATGCAAA
378 CTTATTTAAGAGACAAACTTTGATTCGATCAAAAA-CGGTGGAAAGAAAAGCTTTTC-TTGCGAC
** * * * * * * *
1581682 AGAAAATCATCAGTATCATTTACCCTATTGAAGAG
441 ACCAAAGCATCAATGTCATGTATCCTAATGAAGGG
* ** * ** *** *** * * ** *
1581717 AATGTGTTTAT-AATGCTGGATC-ACAAAATGAATTAAGA-TCATTATTG-GAATCCTTGTTTGT
1 AATGTGTTTTTGGTTTC-CAATCTTTTAAA-GAATGGTGACT-GTTA-CGAGAATCGATGCTTGT
* * * * * * * * * * *
1581778 CTCATTT-AGAGCATAAACTTAGACTTTACA--AAAATTGTTGG--TACAAATGCCTTT-CTTGT
62 CTTATTTAAG-GGATAAACTTTGATTTTA-AGTAAAATAG--GGCAAAGAAAAG-ATTTCCATGC
* ** * * * * * * * * * **
1581837 GAAACCAAACCATCAATATCGTGTATCATTATGAGAAGACTATGTTTAT-GGGCCTTAATCTTGA
122 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCC-TAATC-ACA
* * * ** * * * *
1581901 AAA-GTAT-AGGGATTAGTATGACTATTA-CC--GTTTGTCTTATTTGATAG-ACAAACTTTGA-
185 AAATGAATGA-AGATCA-T-T-ACTAGAATCCATGTTTGTCTCATTTGA-GGCACGAACTTAGAC
* **** * * *
1581959 TTCGATCAAAAA-CCAAGGAAAGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATC
245 TT-TA-CAAAAATTGGTGGAAA-AAA-GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATC
* * * * * ** * * ** * * ** *
1582023 CTAACGA-AGGGAATATGTTTTTGGTACCTAATCTTTTAAGGAATGGTGACAATTACGAGAATCG
306 CTAATGAGA-AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTAT-T
* * * * * ** * * * **
1582087 ATT-CTTCTCTTATTTTAGGGATAAACTTTGATTTTAATTAAAATAAGGT--AAAAAAAATATTT
369 ATTGTTTGTCTTATTTAAGAGACAAACTTTGA-TTCGATCAAAA-ACGGTGGAAAGAAAAGCTTT
* * * * * ** * * * *
1582149 CCATCCAAAAGAAAATCATCAATATCATTTATCCTAATG-AGAAG
432 TCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GG
* * * * *** ** * * * * *
1582193 AATATGTTTATAG-TGCCTAATC-ACAAAATGAATGAAGA-TCATTGCTAGAATCCATGTTTGTC
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAA-GAATGGTGACT-GTTACGAGAATCGATGCTTGTC
* * * ** * * * * * * * ** * **
1582255 TCATTTGAGGCACGAACTTAGACTTTACA--AAAGTTGGTGGAAA-AGATGCCTTCCTTGTGAAA
63 TTATTTAAGGGATAAACTTTGATTTTA-AGTAAAATAGG-GCAAAGAAAAGATTTCCATGCAAAA
** * * * * * **
1582317 CCAAACCATCAATATCATGTATCCTAATGA-GAAAATTATGTTTATGGTGCCTAATCTTGAAAA-
126 GAAAATCATCAATATCATTTATCCTAATGAGGAGAA-TGTGTTTATAGTGCCTAATC-ACAAAAT
** * * ** * * * * *
1582380 GAATGGGGAT--TT-GTATGACTTTAATGTTTGTCTTA-TTGCAAAG-ACAAACTTTGA-TTCGA
189 GAATGAAGATCATTACTA-GA-ATCCATGTTTGTCTCATTTG--AGGCACGAACTTAGACTT-TA
** * * * * * * **
1582439 TCAAAAA-CAGTGAAAAAAAAGCTTTTCTTGCGACACTATAGCATCAATGTCAACTATCCTAA--
249 -CAAAAATTGGTG-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATG
** * * * *** ** * * ** * *
1582501 AGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTTACT-GTTGTGAGAATCGA-GG
312 AGAA--GACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAG-TATGACTAT-TATTG
* * * * * ** * *
1582564 CTTGTCTTAATGAAGGGATAAACTTTGATTTTAATTAAAATA-GG-GCAAAGAAAAG-TTTTCTA
373 TTTGTCTTATTTAAGAGACAAACTTTGA-TTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCT-
* * ** * ** * * *
1582626 TGCAAAAGAAAATCATCAAAATCATTTATCCTGATGAGGGG
435 TGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGG
* * *** ** * * *
1582667 AATGTGTTTATGG-TGCCAAATC-ACAAAATGAATGAAGA-TCATTAC-AAAATCCG-TGTTTGT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAA-GAATGGTGACT-GTTACGAGAAT-CGATGCTTGT
* * * * * * * * * * *
1582727 CTCATTTGAGGCATGAACATAGACTTTACA--AAAAT-TGG-TAGGAAAAGAGCCTTT-CTTGCA
62 CTTATTTAAGGGATAAACTTTGATTTTA-AGTAAAATAGGGCAAAGAAAAGA---TTTCCATGCA
** * * * * * * * * * * * * *
1582787 ATGGCAAAGCGTCAATATGATGTATCGTAAAGAGAAGACTATGCTTATGGTGCATAATC-CTGAA
123 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC--AA
** * ** * * * *
1582851 AA-GAATGGGGAT--TT-GTATGACTATTAATGTTTGTCTTATTTAAGAG-ACAAACACT-GA-T
186 AATGAATGAAGATCATTACTA-GA--ATCCATGTTTGTCTCATTTGAG-GCACGAAC-TTAGACT
* ** * * * * * *
1582909 TCAATCAAAAA-CAGTGGAATGAAAAGCTTTTCTTGCGACACCAAAGGATCCATGTTATGTAT-C
246 T-TA-CAAAAATTGGTGGAA--AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC
* * * * * * ** * ** * * ** * *
1582972 TAATGACG-GGATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGGGACGAATACGAGAATCAA
307 TAATGA-GAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAT
* * * ** ** ** * * * * *
1583036 TGCTTGTCTTATTTAGGGGATGAACTTTGATTTTAAGAAAAATAGG-GCAAAGAAAAGATTTCCA
371 TGTTTGTCTTATTTAAGAGACAAACTTTGATTCGATCAAAAA-CGGTGGAAAGAAAAGCTTTTCT
* ** ** * *
1583100 TGC-ATAAGAAAATTATCAATATCAT-TATCCTAATG-TGGAG
435 TGCGA-CACCAAAGCATCAATGTCATGTATCCTAATGAAGG-G
* * * *** * *** * * * * **
1583140 AATGTGTTTATAG-TGCCTAATCACATAATGAATAAAGA-TCATTACTAGAACCCATATTTGTCT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACT-GTTACGAGAATCGATGCTTGTCT
* * * * * * * * * ** *
1583203 CATTTGAA-GCATGAACATAGACTTTATAA--AAATTAGTGCGAA-AAAAGCCTTT-TTTGCGAA
64 TATTT-AAGGGATAAACTTTGA-TTT-TAAGTAAAATAGGGCAAAGAAAAG-ATTTCCATGCAAA
** ** * * * * * **
1583263 ACCAAGGCATCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAA
125 AGAAAATCATCAATATCATTTAT-CCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAA
* * * * * * *
1583327 -GAA--AATG-T-ATTAGTATGACTAT-TAT-TGTTATCTTATTTAAGAG-A-TAATCTTTGA-T
188 TGAATGAA-GATCATTACTA-GA--ATCCATGT-TTGTCTCATTTGAG-GCACGAA-CTTAGACT
* ** * * * * * * *
1583382 TCAATCAAAAA-CCGTGAAAAGAAAAGCTTTTCCTAC-AACACTAGAGCATCAATGTCATGTATC
246 T-TA-CAAAAATTGGTG-GAA-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATC
* * * * * ** * * * **
1583445 CTAATGA-AGGGACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGTGACT-GTTATGAGAATT
306 CTAATGAGA-AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAG-TATGACTATT
* * * * * * ** * * * *
1583508 GA-TGCTAGTTTTTTTTAAGGGATAAACTTTGATTTAAATTAAAAAAGG-GCAAAGAAAAGATTT
369 -ATTGTTTGTCTTATTTAAGAGACAAACTTTGA-TTCGATCAAAAACGGTGGAAAGAAAAGCTTT
* * ** ** * *
1583571 CCATGCAGA-AGAAAATTATCAATATCAT-TATCCTAATG-TGGAG
432 TCTTGC-GACACCAAAGCATCAATGTCATGTATCCTAATGAAGG-G
* * * *** * *** * * * * **
1583614 AATGTGTTTATAG-TGCCTAATCACATAATGAATAAAGA-TCATTACTAGAACCCATATTTGTCT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACT-GTTACGAGAATCGATGCTTGTCT
* * * * * * * * * ** *
1583677 CATTTGAA-GCATGAACATAGACTTTATAA--AAATTAGTGCGAA-AAAAGCCTTT-TTTGCGAA
64 TATTT-AAGGGATAAACTTTGA-TTT-TAAGTAAAATAGGGCAAAGAAAAG-ATTTCCATGCAAA
** ** * * * * * **
1583737 ACCAAGGCATCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAA
125 AGAAAATCATCAATATCATTTAT-CCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAA
* * * * * * *
1583801 -GAA--AATG-T-ATTAGTATGACTAT-TAT-TGTTATCTTATTTAAGAG-A-TAATCTTTGA-T
188 TGAATGAA-GATCATTACTA-GA--ATCCATGT-TTGTCTCATTTGAG-GCACGAA-CTTAGACT
* ** * * * * * * *
1583856 TCAATCAAAAA-CCGTGAAAAGAAAAGCTTTTCCTAC-AACACTAGAGCATCAATGTCATGTATC
246 T-TA-CAAAAATTGGTG-GAA-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATC
* * * * * ** * * * **
1583919 CTAATGA-AGGGACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGTGACT-GTTATGAGAATT
306 CTAATGAGA-AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAG-TATGACTATT
* * * * * * ** * * * *
1583982 GA-TGCTAGTTTTTTTTAAGGGATAAACTTTGATTTAAATTAAAAAAGG-GCAAAGAAAAGATTT
369 -ATTGTTTGTCTTATTTAAGAGACAAACTTTGA-TTCGATCAAAAACGGTGGAAAGAAAAGCTTT
* * ** * * * *
1584045 CCATGCAGA-AAAAAAACATCAATATCATTTACCCTAA-GAAGGAG
432 TCTTGC-GACACCAAAGCATCAATGTCATGTATCCTAATGAAGG-G
* * * * *** ** * * * *
1584089 AATATGTTTATAG-TGCCTAATC-ACAAAATGAATGAAGA-TCATTACTAGAATCTATGTTTGTC
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAA-GAATGGTGACT-GTTACGAGAATCGATGCTTGTC
** * * *** * * * ** * * * * *
1584151 CAATTTGAGGCACGGACTTAGACTTTACA--AAAATTGGTGGTAA-AAAGGGTTTTCTTGC-GAA
63 TTATTTAAGGGATAAACTTTGATTTTA-AGTAAAATAGG-GCAAAGAAAAGATTTCCATGCAAAA
** * * * * * * * * **
1584212 GCTAATCCATTAATATCGAGTAAT-CTAATGAGAAGACTATATTTATGGTGCCTAATCTTGAAAA
126 GAAAAT-CATCAATATC-ATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAA
** * * * * * * *
1584276 -GAATGGGGAT--TT-GTATGACTAT-TATTGTTTGTC-CTATTTAAAAG-ACAAATTTTGA-TT
188 TGAATGAAGATCATTACTA-GA--ATCCA-TGTTTGTCTC-ATTT-GAGGCACGAACTTAGACTT
* * * * * *
1584333 CGATCAAAACA--GGTGCACAGAACAGCTTTTCTTGC-AACACCAAGGCATCAATAACATGTATC
247 -TA-CAAAA-ATTGGTGGA-A-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATC
** * * * * * **
1584395 CTAAT-A-AAGGGAAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAATGGTGATT-GCTATGAGAA
306 CTAATGAGAA--GACTATGTTTATGGTGCCTAATCTTG-AAAAGAATGGGGATTAG-TATGACTA
* * *** * * ** * * * *
1584456 TCAATCCATGT-TTGATTTAAGGGATAAACTTTGACTTTAATTAAAATA-GG-GCAAAGAATAGA
367 TTATTGTTTGTCTT-ATTTAAGAGACAAACTTTGA-TTCGATCAAAA-ACGGTGGAAAGAAAAGC
* * * * ** * * * * * *
1584518 TTTCCATGCAAAAGAAAATCATAAATATCATTTATTCTAATG-AGAAG
429 TTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GG
* * * * *** ** * * * *
1584565 AAGGTGTTTATAG-TGCCTAATC-ACGAAATGAATGAAGA-TCATTACTG-GAACCCATGTTTGT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAA-GAATGGTGACT-GTTAC-GAGAATCGATGCTTGT
* ** * ** * * * * *
1584626 CTTGTTCGAGGTACGAACTTAGACTTTTCAA--AAATTCTTGGG--AA-AAAAGCCTTT-CTTGC
62 CTTATTTAAGGGATAAACTTTGA-TTTT-AAGTAAA--ATAGGGCAAAGAAAAG-ATTTCCATGC
* ** * * * * * * * * ***
1584685 GAAACCAAATCATCAATATGATGTATCTTAAGGAGAAGACTATGTTTATGGTGCCTAATGGTGAA
122 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAAT-CACAA
* ** * * * * * * * *
1584750 AATGAACGGGGATTAGTA-TGAGTATTCATGTTTGTCTTAATTAAGAGGCA--AACTTTG-GTTC
186 AATGAATGAAGATCATTACT-AGAATCCATGTTTGTC-TCATT-TGAGGCACGAACTTAGACTT-
** * * * *
1584811 TATCAAAAA-TGGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAGCATTAATGTCATGTATCATA
247 TA-CAAAAATTGGTGGAAA--AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTA
* * * * * * ** *
1584875 AT-A-AAGGGAATGTGTTTTTGGT-TCTCAATCTTGAAAAGAATGGAGACT-GTTATGAGAATCA
309 ATGAGAA--GACTATGTTTATGGTGCCT-AATCTTGAAAAGAATGGGGATTAG-TATGACTATTA
* * * ** * * *
1584936 ATGCTTGTCTTATTTAAGGGATGAACTTTGATTTCAAGT-AAAATA-GG-GCAAAGAAAAGATTT
370 TTGTTTGTCTTATTTAAGAGACAAACTTTGA-TTCGA-TCAAAA-ACGGTGGAAAGAAAAGCTTT
** * * ** *** * * *
1584998 TAATGCAAAAGAAAATTGTCAATATCGTTTATCCTAATG-AGGAG
432 TCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGG-G
* * * *** * ** ** * * * * * *
1585042 AATGTGTTTATAG-TGCCTAATC-ACAAAATGAGTGAAGATCACTCA-TAGAATCCACGTTTATC
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAA-GAATGGTGA-CTGTTACGAGAATCGATGCTTGTC
* * * * * * * * * * * *
1585104 TCATTTGAGGCATGAACTTAGAATTTAA-AAAAATTGGTG---GGAAAATGCCTTT--TTGCGAA
63 TTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGG-GCAAAGAAAA-G-ATTTCCATGCAAA
* * ** * * * *
1585163 AGCAAAA-CATCAATATCGTGTATCCTAATGAAAAGACTATGTTTAT-G-GCCCCAATCATGAAA
125 AG-AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG-CCTAATCA-CAAA
* * * * * ** * * * *
1585225 A--ATTGGAGATTATTACAACAATCCAAATTCGTGTTATTTGAAGG-ACGAACTTTGA-TTCTAT
187 ATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTG-AGGCACGAACTTAGACTT-TA-
* * * * * * * * * *
1585286 CGAAAA-TGATGAAAAGAAAAGGTTCTTT-TATG-G-CACCAAAGCCTTAATGTCTTGTCTCCTA
249 CAAAAATTGGTG-GAA-AAAA-G-CCTTTCT-TGCGAAACCAAAGCATCAATATCATGTATCCTA
* * * * * * * * * ** * *
1585347 AAGATGGTA-AC-ACGTTTTTGCTTCCCAATCTCGAAATGAATGAAGACAATTA-CAAGAATCTA
309 ATGA--GAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATG--G-GGATTAGTATG-A-CTA
* ** * ** ** *** * * *
1585409 -TATTG-GTGTC--ATTTGGGGGATGAACTTTGATTTTAAGGAAAATGG-GTCAAAGAACA-CTT
367 TTATTGTTTGTCTTATTTAAGAGACAAACTTTGATTCGATCAAAAACGGTG-GAAAGAAAAGCTT
* * * * * ** *
1585468 TTCTTGAGACATCAAAGCAACAATATCGTGTATTGTAGTG--GGG
431 TTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGG
**** * * * * * * * * * * *
1585511 AAAACATATTT-GTAGTGCCTAATC-GTTAGCAG-ATGGAGA-TGGTTATGACAACCCATGGTGG
1 AATGTGTTTTTGGT--TTCC-AATCTTTTA-AAGAATGGTGACT-GTTACGAGAATCGATGCTTG
*** * * * * * * ***
1585572 TCGCCTTTGAA-GGATGAACATTGATTCT-A-TAAAAAACGGTGGAAAGAAAAGCTTTTTTTG-A
61 TCTTATTT-AAGGGATAAACTTTGATTTTAAGTAAAATA-GG-GCAAAGAAAAGATTTCCATGCA
** ** * * ** * * * * * * **
1585633 AACACCAACGCATCAATGTTATGCATCCTAACGAAGTGAATGTGTTTTTAGTTCCCAATCTTGAA
123 AA-AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAA
* * * * * * * * **
1585698 AA-GAATGGAGA-CTATTACGAGAATCAATGCTTGTCTTATTTAAGGGATGAACTTTTA-TTTAT
186 AATGAATGAAGATC-ATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA-
* * * * * * ** * * * * *
1585760 GAAAAATAGG-GCAAAGAAAAG-ATTTCAATGCAAAAGAAAATCATCAGTATCATTTACCCTATT
249 CAAAAATTGGTG-GAA-AAAAGCCTTTC-TTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * ** * ** *** * * **
1585823 GA-AGAGAATGTGTTTATAATG-CTGGATC-ACAAAATGAATTAAGATCATTATTGGA--ATCCT
311 GAGA-AGACTATGTTTATGGTGCCT-AATCTTGAAAA-GAATGGGGATTAGTA-T-GACTATTAT
* * * * * * * * * *
1585883 TGTTTGTCTCATTT-AGAGCATAAACTTAGACTT-TA-CAAAAATTGTTGG-TACAAATGCCTTT
371 TGTTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAAA-CGGTGGAAAGAAAAGCTTTT
* * * * * * * *
1585944 CTTGTGAAACCAAACCATCAATATCGTGTATCATTATG-AGAAG
433 CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GG
* * * * ** * * * ** *
1585987 ACTATGTTTATGG--GCCTTAATCTTGAAAAGTATAGG-GATTAGTATGACTATTACCG-T--TT
1 AATGTGTTTTTGGTTTCC--AATCTTTTAAAGAAT-GGTGACT-GT-T-ACGAGAATCGATGCTT
* ** * ** *** * * * * * * *
1586046 GTCTTATTTGATAGACAAACTTTGATTCGATCAAAAACCAAGG-AAAGAAATGCTTTTCTTGCGA
60 GTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAA-TAGGGCAAAGAAAAGATTTCCATGCAA
* ** * * * * * * * * ****
1586110 CACCAAAGCATCAATGTCATGTATCCTAACGAAGG-GAATATGTTTTTGGTACCTAATCTTTTAA
124 AAGAAAATCATCAATATCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATCACAAAA
* ** * * * * * * ** * *
1586174 GGAATGGTGA-CAATTACGAGAATCGAT-TCTTCTCTTATTTTAGGGATAAACTTTGATTTTA-A
188 TGAATGAAGATC-ATTACTAGAATCCATGT-TTGTCTCATTTGAGGCACGAACTTAGACTTTACA
* * *** * * * ** * *
1586236 TTAAAATAAGGT-AAAAAAAATATTTCCATCCAAAAGAAAATCATCAATATCATTTATCCTAATG
251 --AAAAT-TGGTGGAAAAAAGCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATG
* * ** ** * **
1586300 AGAAGAATATGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCA-T-TG-CTAGAATCCATG
312 AGAAGACTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTATGACTATTAT---TG
* * * * * ** * * * *
1586361 TTTGTCTCATTTGAG-GCACGAACTTAGACTT-TA-CAAAAGTTGGTGGAAA-AGATGCCTTCCT
373 TTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCT
* * * * **
1586422 TGTGAAACCAAACCATCAATATCATGTATCCTAATG-AGAA
435 TGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGG
* * * ** * * * ** ** *
1586462 AATTATGTTTATGG-TGCCTAATCTTGAAAAGAATGGGGA-TTTGTATGA-CTTTAATGTTTGTC
1 AA-TGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGT-TACGAGAATCGATGCTTGTC
* * * ** *** * * * * * * * * *
1586524 TTATTGCAA-AGACAAACTTTGATTCGATCAAAAACAGTG-AAAAAAAAGCTTTTCTTGCGACAC
63 TTATT-TAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
* * * * ** * * * * * ****
1586587 TATAGCATCAATGTCAACTATCCTAAAGAAGGGAAAATGT-TTT-TGGTTCCCAATCTTTTTAA-
127 AAAATCATCAATATCATTTATCCTAATG-A-GGAGAATGTGTTTATAGTGCCTAATC-ACAAAAT
* ** * * * * * * ** * *
1586649 GAATG--G-TTACTGTTGTGAGAATCGAGGCTTGTCTTA-ATGAAGGGATAAACTTTGATTTTA-
189 GAATGAAGATCA-T-TACT-AGAATCCATGTTTGTCTCATTTG-AGGCACGAACTTAGACTTTAC
* * * * ** * * * *
1586709 ATTAAAATAGG-GCAAAGAAAAG-TTTTCTATGCAAAAGAAAATCATCAAAATCATTTATCCTGA
250 A--AAAATTGGTG-GAA-AAAAGCCTTTCT-TGCGAAACCAAAGCATCAATATCATGTATCCTAA
** * * * ** ** * * * ** ***
1586772 TGAGGGGAATGTGTTTATGGTGCCAAATC-ACAAAATGAATGAAGATCATTA-CAAAATCCGTGT
310 TGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTATGACTATTATTGT
* * * * * * * *
1586835 TTGTCTCATTT--GAGGCATGAACATAGACTT-TA-CAAAAATTGGTAGG-AA-AAGAGCCTTTC
374 TTGTCTTATTTAAGAGACA--AACTTTGA-TTCGATCAAAAA-CGGT-GGAAAGAAAAGCTTTTC
* *** * * * * * *
1586894 TTGCAATGGCAAAGCGTCAATATGATGTATCGTAAAG-AGAAG
434 TTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GG
* * * * * * * ** * * * ** ** *
1586936 ACTATGCTTATGG-TGCATAATCCTGAAAAGAATGGGGA-TTTGTATGACTATTAATGTTTGTCT
1 AATGTGTTTTTGGTTTC-CAATCTTTTAAAGAATGGTGACTGT-TACGAGAATCGATGCTTGTCT
* * ** * * * * * * *
1586999 TATTTAAGAGACAAACACTGA-TTCAA-TCAAAAACAGTGG-AATGAAAAGCTTT-CTTGCGACA
64 TATTTAAGGGATAAACTTTGATTTTAAGT--AAAATAG-GGCAAAGAAAAGATTTCCATGCAAAA
** ** * * * * * * * * * ***
1587060 CCAAAGGATCCATGTTATGTAT-CTAATGACGG-GATTGTGTTTTTGGTTCCCAATCTTTTAAAT
126 GAAAATCATCAATATCATTTATCCTAATGA-GGAGAATGTGTTTATAGTGCCTAATC-ACAAAAT
** * * * * * * * * * *
1587123 -AATGGGGA-CGAATACGAGAATCAATGCTTGTCTTATTT-AGGGGATGAACTTTGATTTTAAGA
189 GAATGAAGATC-ATTACTAGAATCCATGTTTGTCTCATTTGA-GGCACGAACTTAGACTTT-ACA
* * * * ** **
1587185 AAAATAGG-GCAAAGAAAAG-ATTTCCATGC-ATAAGAAAATTATCAATATCAT-TATCCTAATG
251 AAAATTGGTG-GAA-AAAAGCCTTT-CTTGCGA-AACCAAAGCATCAATATCATGTATCCTAATG
* * * * * ** * *** * * *
1587246 TGGAGAATGTGTTTATAGTGCCTAATC-ACATAATGAATAAAGATCATTACTAGAACCCA-TA--
312 AGAAGACTATGTTTATGGTGCCTAATCTTGA-AAAGAATGGGGATTAGTA-T-G-A-CTATTATT
* * * * * **
1587307 -TTTGTCTCATTTGA-AG-CATGAACATAGACTT-TAT-AAAAATTAGTGCG-AA-AAAAGCCTT
372 GTTTGTCTTATTTAAGAGACA--AACTTTGA-TTCGATCAAAAA-CGGTG-GAAAGAAAAG-CTT
* * * *
1587365 TT-TTGCGAAACCAAGGCATCAATATCATGTATCCCT-ATG-AGAAG
431 TTCTTGCGACACCAAAGCATCAATGTCATGTAT-CCTAATGAAG-GG
* * * * ** * * ** * *
1587409 ACTATGTTTATGG-TGCCTAATCTTGAAAAGAAAAT-GT-ATTAG-TATGACTAT-TATTG-TTA
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAG--AATGGTGACT-GTTACGAGAATCGA-TGCTTG
* * * * * * *
1587468 TCTTATTTAAGAGATAATCTTTGA-TTCAA-TCAAAA-ACCGTGAAAAGAAAAGCTTTTCC-TAC
61 TCTTATTTAAGGGATAAACTTTGATTTTAAGT-AAAATA--GGGCAAAGAAAAG-ATTTCCATGC
* ** * * * * * * * * * * ****
1587529 AACACTAGAGCATCAATGTCATGTATCCTAATGAAGG-GACTATGTTTTTTGTTCCCAATCTTTT
122 AAAAGAAAATCATCAATATCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATCACAA
* ** * ** * * * ** * * ** *
1587593 AAGGAATGGTGA-CTGTTA-TGAGAATTGATGCTAGTTTTTTTTAAGGGATAAACTTTGA-TTTA
186 AATGAATGAAGATC-ATTACT-AGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* ** * * * * * * *
1587655 AATTAAAAAAGG-GCAAGAAAAG-ATTTCCATGCAGAAA-AAAATCATCAATATCATTTACCCTA
249 CA--AAAATTGGTGGAA-AAAAGCCTTT-CTTGC-GAAACCAAAGCATCAATATCATGTATCCTA
* * * ** ** * *
1587717 A-GAAGGAGAATATGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCATTACTAGA--ATCT
309 ATG-AGAAGACTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTA-T-GACTAT-T
* * ** * * * * * *
1587778 A-TGTTTGTCTAATTTGAG-GCACGGACTTAGACTT-TA-CAAAAATTGGTGG-TA-AAAGGGTT
369 ATTGTTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAAA-CGGTGGAAAGAAAAGCTT
* ** * * *
1587837 TTCTTGCGA-AGCTAATCCATTAATATCGA-GTAAT-CTAATG-AGAAG
431 TTCTTGCGACA-CCAAAGCATCAATGTC-ATGT-ATCCTAATGAAG-GG
* * * * * ** * * * ** * *
1587882 ACTATATTTATGG-TGCCTAATCTTGAAAAGAATGGGGA-TTTGTATGACTAT-TATTGTTTGTC
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGT-TACGAGAATCGA-TGCTTGTC
* ** * * * * * * * *
1587944 CTATTTAAAAGACAAATTTTGA--TT-AGATCAAAACAGGTGCACAGAAAAGCTTTTCTTGCAAC
63 TTATTTAAGGGATAAACTTTGATTTTAAG-T-AAAATAGG-GCAAAGAAAAGATTTCCATGCAAA
** ** * * * * * * * ****
1588006 ACCAAGGCATCAATAACATGTATCCTAATAAAGGGAAAATGT-TTT-TGGTTCCCAATTTGTTAA
125 AGAAAATCATCAATATCATTTATCCTAAT-GA-GGAGAATGTGTTTATAGTGCCTAA-TCACAAA
** *** * *** * * * * ** * *
1588069 A-GAATGGTGATTGCTA-TAAGAATCAATCCATGTTTGATTTAAGGGATAAACTTTGATTTTA-A
187 ATGAATGAAGATCATTACT-AGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACA
* * * ** * ** * * *
1588131 TTAAAATAGG-GCAAATAATAG-ATTTCCAAGCAAAAGAAAATCATAAATATCATTTATCCTAAT
251 --AAAATTGGTGGAAA-AA-AGCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * * ** * ** * * **
1588194 GAGAAGAATGTGTTTATAGTGCCTAATCACGAAATGAATGAAGATCATTACTGGA--ACCCA-TG
311 GAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTA-T-GACTA-TTATTG
* ** * * * * *
1588256 TTTGTCTTGTTCGAG-GTACGAACTTAGACTT--TTCAAAAATTC-TTGGGAAA-AAAAGCCTTT
373 TTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAAA--CGGT-GGAAAGAAAAGCTTTT
* * * * * * *
1588316 CTTGCGAAACCAAATCATCAATATGATGTATCTTAA-GGAGAAG
433 CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GG
* * * ** * * *** * * * * *
1588359 ACTATGTTTATGGTGACTAATGGTGGAAAAGAATGGGGATTAG-TATGAGTATTC-ATGTTTGTC
1 AATGTGTTTTTGGTTTCCAAT-CTTTTAAAGAATGGTGACT-GTTACGAG-AATCGATGCTTGTC
* * * * * * * * * * * * *
1588422 TTAATTAAGAGG-CAAACTCTGGTTCT-A-TCAAATATGGTGGAAAGGAAAGTTTTTCTTGCGAC
63 TTATTTAAG-GGATAAACTTTGATTTTAAGTAAAATA-GG-GCAAAGAAAAGATTTCCATGCAAA
** * * * * * * * * * **
1588484 ACCAAAGCATCAATGTCATGTATCATAATAAAGG-GAATGTGTTTTTGGTTCTTAATCTTGAAAA
125 AGAAAATCATCAATATCATTTATCCTAAT-GAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAA
* * * * * * * *
1588548 -GAATG--GATACTGTTACGAGAATCAAT-TCTTGTCTTATTTAAGGGATGAACTTTGA-TTT-C
188 TGAATGAAGAT-C-ATTACTAGAATCCATGT-TTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * ** ** * ** * * *
1588607 AAGTAAAATAGG-GCAAACAAAAGATTTTAATGCAAAAGAAAAATCATCAATATCGTTTATCCTA
250 -A--AAAATTGGTG-GAA-AAAAGCCTTTCTTGCGAAA-CCAAAGCATCAATATCATGTATCCTA
* * * * ** * ** * * **
1588671 ATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAGTGAAGATCATTCATAGA--ACCCA
309 ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGT-AT-GACTA-TTA
* * * * * * * * *
1588733 -CGTTTATCTCATTTGAG-GCACGAACTTAGACTT-TA-CAAAAATTGGTGG---GAAAATGCCT
370 TTGTTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAAA-CGGTGGAAAGAAAA-GCTT
* * ** * * * *
1588791 TTCTTGCAAAAGAAAAACATCAATATCGTGTATCCTAATGAAAAGG
431 TTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATG-AAGGG
* * * ** * * * * * * * * ** *
1588837 ACTATGTTTATGG-CCCCAATC-ATGAAA-AATTGGAGATTATTACAACAATCCA-AATTCGTGT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAA-TGGTGACTGTTACGAGAATCGATGCTT-GTCT
** * * * * * **
1588898 TATTTGAA-GGACGAACTTTGATTCTATCG-AAAAT-GATGAAAAGAAAAGGTTCTTTTATGGC-
64 TATTT-AAGGGATAAACTTTGATTTTA-AGTAAAATAG-GGCAAAGAAAA-GAT-TTCCAT-GCA
** * * * * * * * * *
1588959 --ACCAAAGCCTTAATGTC--TTGTCTCTAA-GATGGTA-ACACGT-TTT-T-GCTTCCCAATCT
123 AAAGAAAATCATCAATATCATTTATC-CTAATGA-GG-AGA-ATGTGTTTATAG-TGCCTAATCA
* ** * * * * * * * *
1589015 CGAAATGAATGAAGAAAATTACAAGAATCTATATTGGTCTCATTTTTG-GGGATGAACTTTGATT
183 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCA--TTTGAGGCACGAACTTAGACT
* ** * * * * * * * **
1589079 TTA-AGGAAAATGGGTCAAAGAAAAACTTTTCTTGAGACATCAAAGCAACAATATCTTGTATTGT
246 TTACA--AAAATTGGTGGAA-AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCT
* * * * * * ** * * * **
1589143 AGTGGGGAGAAC-ATATTTGTAGTGCCTAATCGTT-AGCAG-ATGGAGA-TGGTTATGACAACCC
308 AATGAGAAG-ACTATGTTTATGGTGCCTAATC-TTGAAAAGAATGGGGATTAG-TATGACTA-TT
* *** ** * * * *
1589204 A-TGGTTGTCGCCTTTGAAG-GATGAACATTGATTCTATAAAAAACGATGGAAAGAAAAGC-TTT
369 ATTGTTTGTCTTATTT-AAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTT
** * * * * *
1589266 CTTTGAAACACCAAAGCATCAATGTTATGCATTCTAACGAAGAG
433 C-TTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGG
* * ** *
1589310 AATGTGTTTTTAGTTCCCAATCTTGAAAAGAATTGAG-GACTATTACGAGAATCGATGCTTGTCT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAA-TG-GTGACTGTTACGAGAATCGATGCTTGTCT
* * * * * *
1589374 TATTTAAGGGATGAACTTTTATTTTATGAAAAATAGGGCAAAGAAAAGATTTTCATGTAAAAGAA
64 TATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * * ** *
1589439 AATCATCAGTATCATTTACCCTATTGA-GAGAATGTGTTTATAATGCCGGATCACAAAATGAATT
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * *
1589503 AAGATCATTACTGGAATCCTTGTTTGTCTCATTT-AGAGCA-TACACTTAGACTTTACAAAAATT
194 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAG-GCACGA-ACTTAGACTTTACAAAAATT
* * * * * * * *
1589566 GCTGGTACAAATGCCTTTCTTGTGAAACCAAACCATCAATATCGTGTATCATTATGAGAAGACTA
257 GGTGG-AAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTA
* * *
1589631 TGTTTATGG-GCCTTAATCTTGAAAAGTATAGGGATTAGTATGACTATTACTGTTTGTCTTATTT
321 TGTTTATGGTGCC-TAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTT
* * ** **
1589695 GATAGACAAACTTTGATTCGATCAAAAACCATGGAAAGAAATTCTTTTCTTGCGACACCAAAGCA
385 AAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCA
*
1589760 TCAATGTCATGTATCCTAACGAAGGG
450 TCAATGTCATGTATCCTAATGAAGGG
* * ** * * *
1589786 AATATG-TTTTGG-TTCCTAATCTTTTAAGGAATGGTGACAATTGCGAGAATCGATTCTTCTCTT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * * * * *
1589849 TTTTAAGGGATATAAACTTTGATTTCAATTAAAATTA-GGTAAAGAAAATATTTCCATCCAAAAG
65 ATTTAAGGG--ATAAACTTTGATTTTAAGTAAAA-TAGGGCAAAGAAAAGATTTCCATGCAAAAG
* * *
1589913 AAAATCATCAATATCATTTATTCTAATGAGGAGAGAATATGTTTATAGTGCCTAATAACAAAATG
127 AAAATCATCAATATCATTTATCCTAATGA-G-GAGAATGTGTTTATAGTGCCTAATCACAAAATG
* *
1589978 AATGAAGATCATTGCTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAG
190 AATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * ** ** * * *
1590043 TTGGTGTTAAAGAAA-CCCTTATTGCAAAATGAAAGGGTCAATATAATGTATCCTAATGGGATGA
255 TTGGTG-GAAA-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGA
* * * *
1590107 CTATGTTTATGGTGCCTAAGCGTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTT-T
318 CTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTAT
* *
1590171 TTAAAGAGACAAACTTTGATT-GAATAAAAAACGGAGGAAAGAAAA-CTTTTCTTGCGACACCAA
383 TT-AAGAGACAAACTTTGATTCG-ATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAA
* *
1590234 CGCATCAATGTCATGTAACCTAATGAAGGG
446 AGCATCAATGTCATGTATCCTAATGAAGGG
* * * * * *
1590264 AATGTG-TTTTGG-TTCCTAATTTTTTAAAAAATGGAGACTGTTACGAGAATCAATTCTTGCCTT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * * * * * * *
1590327 GTTTAAAGGATGAACTTTGA-TTTCAGAAAAAATAGGGTAAAGAAAAGATTTCTATGAAAAAGAA
65 ATTTAAGGGATAAACTTTGATTTTAAG-TAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * * * *
1590391 AATCATCAATATCATTTAACCTAATGAGGAGAAT-T-ATTATAGTGCCGAATCACATAACGTATG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * * * * * ** ***
1590454 AAGATCATT-TTCGGAACCCATGTTTGTCTTATTTGAGGCACAAACTTATACTTTGTAGCGATTG
194 AAGATCATTACT-AGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTG
* * * * *
1590518 GTGCG-AGAAAGCC-TTCTTGTGAAACCAAGGCATCAATATCGTGCATCCTAATGAGAAGACTAT
258 GTG-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTAT
* *
1590581 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTGTGACTATTCA-TGTTTGTCTTATATA
322 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATTGTTTGTCTTATTTA
* * * * * * * *
1590645 TGACACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGCTTTTCTTACGATACCAAAACAT
386 AGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
*
1590710 CAATGTCAAGTATCCTAATGAA-GG
451 CAATGTCATGTATCCTAATGAAGGG
** * * ** *
1590734 AATGTGTTTTT-G-TTCCAATCTTGAAAAGAATGGAGACTATTACGAGAATTAATGATTGTCGTT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTC--T
* * * *
1590797 TATTTTAA-GGA-AGAACTTTGATTTCAAGGAAAATAAGGCAAAGAAAAGATTTTCATGCAAAAG
64 TA-TTTAAGGGATA-AACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
* * * * *
1590860 -AAATCTTCAATATCATTTATCCTAATAAGGAGAATATGTTTATAGCGCCTAATCACATAATGAA
127 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * * * *
1590924 TGAAGATCATTACTAGAACCCTTGTTTGGCTCATTTGAGGCATGAACTTAGACTTTATAGAATTT
192 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATT
* * ** * * * ** * *
1590989 GGTGGGAATAAAGCTTTTCTTATGAAACCAAGGCATCAATGTCGTGTATCCTTGTGAAAAAACTA
257 GGT-GGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTA
* *
1591054 TGTTTTATGGTGCC---TC-CGAAAAAGAATGGGGATTAGTATGACTCTTATTGTTTGTCTTATT
321 TG-TTTATGGTGCCTAATCTTG-AAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATT
* * *
1591115 TAAAAGACAAACTTTAATTCGATC-AAAACGATGGAAAGAAAAGC-TTTCTTGCGACACCAAAGC
384 TAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGC
1591178 ATCAATGTCATGTATCCTAATGAAGGG
449 ATCAATGTCATGTATCCTAATGAAGGG
** * * * *
1591205 AAAATGTTTTTGGTTCCCAATCTTTTAAAAAATGGTGGACTATTATGAGAATCGATGCTTGTCTT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGT-GACTGTTACGAGAATCGATGCTTGTCTT
* * *** * *
1591270 CTTTAA-GAATAAACTTTGATTTTTTTTTTTAAAATAGGGCAAAGAAAATATTTCCAAGCAAAAG
65 ATTTAAGGGATAAACTTTGA---TTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
* * * *
1591334 AAAATCTTTAATATCA-TTATCC---TCAGGAG--T-TG---A-A-TG--T-GTCACAAAATGAA
127 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * *
1591384 TGAACATCATTACTAGAATCCATGTTTGTCTCCTTTAAGGCACGAACTTAGACTTTACAAACATT
192 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATT
* * * * * * *
1591449 GGTGGTAGAAATGCCTTTC-TGTGAAACCAAACCATCAATATCATGTCTCCTAATAAGAAAACT-
257 GGTGG-AAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTA
* * * * * * * * *
1591512 TGTTTATCGTGGCTAATCTTGAAAAGAATGAGGATTTGTATGACTAGTAATGTTTATGTTGTTTA
321 TGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTA
*
1591577 AGAGACCAAACTTCGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCA
386 AGAGA-CAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCA
* * * *
1591642 TCAGTGT-AGCGTATCCTAATAAAGGA
450 TCAATGTCA-TGTATCCTAATGAAGGG
* * * * * * * *
1591668 AATGTATTTTTGGTTTGCAATCTTTTAAAGAGTGGAGGCTGTTACAAGAATTGATTCTTGTCTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * *
1591733 TTTAAGGGGTGAACTTTGATTTTGAA--AAAATAGGGCAAAGAAAAGATTTCCACAG-AAAAGAA
66 TTTAAGGGATAAACTTTGATTTT-AAGTAAAATAGGGCAAAGAAAAGATTTCCA-TGCAAAAGAA
* * *
1591795 AATCATCAATATCATTTATCCTAATAAGGAGAACGTG-TTATAGTGCCTAGTCACAAAATGAATG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * * * * * * * * *
1591859 AAGATCATTACTGGAACCCAT-CTTATCTCATTAGAGGCATGAACTTAGACTTTGCAGAATTTAG
194 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * * * * *
1591923 TGTGAAAAAAACCTTTCTTGTGAAACCAAGGCAACAATATCATGTA-CCATTATGAGAATACTAT
259 TG-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC-TAATGAGAAGACTAT
* * *
1591987 GTTTATGG-GTCCTAATCTTGAAAAGTATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTG
322 GTTTATGGTG-CCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTA
* * * * *
1592051 AGAGA-AAACTTTGATTTGATCATAAA-GCATGGGAAAGAAAAGCTTTTCTTGTGACACCAAAGA
386 AGAGACAAACTTTGATTCGATCAAAAACG-GT-GGAAAGAAAAGCTTTTCTTGCGACACCAAAGC
1592114 ATCAATGTCATGTATCCTAATGAAGGG
449 ATCAATGTCATGTATCCTAATGAAGGG
* ** * * * *
1592141 AATATGTTTTTGG-TTCCTAATCTTTTAGTGAATGGTGACTATTACAAGAATCGATTCTTCTCTT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* *
1592205 ATTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGTAAAGAAAAGATTTCCATGCAAAA-AAA
65 ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* * *
1592269 ATTTATCAATATCATTTATCCTAATGCGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATG
130 A-TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * * * * *
1592334 AAGGTTATTACTAGAGTCCATGTTT-CCTCATTTGAGGCATGAATTTAGACTTTACAAAAATTGG
194 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * *
1592398 CGGGAAAAAAG-CTCTTCTTGCAAAACCAAAGCATCAATATGATGTATCCTAATGAGAAGACTAT
259 -TGGAAAAAAGCCT-TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTAT
* * * * * * *
1592462 GTTTATGGTGCCTAACCCTAAAAAAAATGGGGATTTGTATGGCTATTAATGTTTGTCGTT-TTTA
322 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTC-TTATTTA
* **
1592526 GGAGACAAACTTTGATTC-ATCAAAAGTGGTGGAAAGAAAA-CTTTTCTTGCGACACCAAAGCAT
386 AGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
1592589 CAATGTCATGTATCCTAATGAAGGG
451 CAATGTCATGTATCCTAATGAAGGG
* * * * * *
1592614 CATGTG-TTTTGG-TTCCTAATCTTTTAAAGAATGGAGACTATTACAAGAATCAATTCTTGTCTT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * * * *
1592677 ATTTAAGGGATGAACTTTGATTTTAAGAAAAAATAGGGTAAAGAGAAGATTTACATGCAAAA-AA
65 ATTTAAGGGATAAACTTTGATTTTAAG-TAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * * * *
1592741 AATCATCAATATCATTTATCCTAATGAGAAGAAT-CGTTTATAGTGACTAATGACATAATGAGTG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
** * * * * * * * *
1592805 AAGATC-TTTGTCGGAAACCATATTTGTATCATTTGAGGCACAAACTTATACTTTATAAAAAGTG
194 AAGATCATTACT-AGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTG
* * * * **
1592869 GTGCAGAAAAAGCCTTTCTTGCGAAACCAAGGAATCAATATCATGTATTCTAACAAGAAGACTAT
258 GTGGA-AAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTAT
* * * *
1592934 GTTTATGGTGCCTAATCTTAAAAAGAATAGGGATTAGTATTACTATTGA-T-TTTGTCTTATATA
322 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATTGTTTGTCTTATTTA
** * * *
1592997 AGACG-CAAACTTTGATTATATCAAAATA--GTGGAAGGAAAAGCTTTTCTTGTGACA-CAAAAC
386 AGA-GACAAACTTTGATTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGC
*
1593058 ATCAATGTCAAGTATCCTAATGAAGGG
449 ATCAATGTCATGTATCCTAATGAAGGG
* * ** * * * * * *
1593085 AATGTGTTTTTCG-TTCCAATATTGAAAAGAATGGAGACTATTACCAG-ATAG-TGATTGTCTAA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * * * *
1593147 TTTTAGGGA-AGAACTTTGATTTCAAGGAAAATAAGGCGAAGAAAAGATTTTCATGCAAAAAGAA
66 TTTAAGGGATA-AACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGC-AAAAGAA
* * * * * *
1593211 AATCTTC-ATACCACTTATCCTAATGAGGAGAATATGTTTATAGCGCCTAATCACATAATGAATG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* ** * * ** * *
1593275 AAGATAATTACCGGAA-CTCGTGTTTGTCTC-GTTGAGGCATTAACTTAGAC--TCCATAAATTT
194 AAGATCATTACTAGAATC-CATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACA-AAAATT
* * * * * ** *
1593336 GGTGGGAATAAAG-ATGTTCTTGCCAAACCAAGGCATC-ATATCGTGTATCCTTGTGA-AAAACT
257 GGT-GGAAAAAAGCCT-TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACT
* * *
1593398 ATGTTTATGGTGGCCTAATCCTAAAAAGAATAGGGATTAGT-TGACTATTA-T-TTTGTCTTATT
320 ATGTTTATGGT-GCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATT
* * * * * *
1593460 TAACAGACAAACTTTAATTCGATAAAAAAAGGTGGAAAGAAAAGCTTTTCTTGTGACACAAAAGC
384 TAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGC
*
1593525 ATCGATGTCATGTATCCTAATGAAGGG
449 ATCAATGTCATGTATCCTAATGAAGGG
** * ** *
1593552 AAAATGTTTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGACACTTGTCTTC
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * *
1593617 TTTAA--GATAAACTTTGA--TTAATTAAAATATGGTAAAGAAAAGATTTTCATGC-AAA-AAAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* * * * * * *
1593676 TCATC---ATCATTTATCCTAAGGAAGAGAATGTTTTTATAATGCCTAATCAAAAAATAAATAAA
131 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
** * * **
1593738 GATTTTTGCTAGAATCAATGTTTGTCTCATTT-AGGGCAC-AAAATAGAC-TTACAAAAATTGGT
196 GATCATTACTAGAATCCATGTTTGTCTCATTTGA-GGCACGAACTTAGACTTTACAAAAATTGGT
* ** * * * * * *
1593800 AGTAAAAGTGCCTGTCTTACGAAACCAAACCATTAATATCATGTATTCTAATGAGAAGACTATCT
260 -GGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGT
** * * *
1593865 TTGCGGTGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTATTGTTTGTCTTATTTAAGG
324 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAGA
* * * * **
1593930 GACAAACTTTGATTCGGTCAACAACGATGGAAAGAAAAGCTTTT-TTGTGACACCAAAGCATCGG
389 GACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAA
*
1593994 TGTCATGTATCCTAAAGAAGCGG
454 TGTCATGTATCCTAATGAAG-GG
* * * *
1594017 -ATATGATTTTGGTTT-CAATCTTTTAAAGAATGGTGACTATTA-GGGAATCGATGCTTGTCTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * * * *
1594079 TTTAAAGGG-TAAACTTTGATATCAATTAAAATAGGGTAAAGAAAAAGATTTCAAAGCAAAAGAA
66 TTT-AAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAG-AAAAGATTTCCATGCAAAAGAA
* * *
1594143 AATCATCATCTTTCATTT-TCCCTAA-GAGGGAGAA--TG----T-GT--C----C-CATAATGA
129 AATCATCA-ATATCATTTAT-CCTAATGA-GGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
*** * *
1594192 GCAAAGATCATTAGTAGAATCCCTGTTTGTCTCA-TTGAGGCACGGAACTTAGACTTTACAAAAA
191 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCAC-GAACTTAGACTTTACAAAAA
* * * *
1594256 TTGGTGGAAAAAAATGCCTTCCCTGTGAAACCAAACCATCAATATCATGTATCCTAATGAGAAGA
255 TTGGTGG-AAAAAA-GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGA
* * * * *
1594321 TTGTGCTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACT-TTAATGTTTGTCTTAT
318 CTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTAT
* *
1594385 TGCAA-AGACAAACTTTGATTCGATCAAAATA--GTGGAAAGAAAAGCTTTTCTTGCGAC-CTAG
383 T-TAAGAGACAAACTTTGATTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCTTGCGACACCA-
* *
1594446 TAGCATCAATGTCA-GCTATCCTAAAGAAGGG
445 AAGCATCAATGTCATG-TATCCTAATGAAGGG
** * * * ** *
1594477 AAAATGTTTTTGG-TTCCCATCTTTT-AAGAATAGTTACTGTTGTGAGAATCGATACTTGTCTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * *
1594540 GTGAAGGGATAAACCTTTGATTTTAATTAAAATAGGGCAAAGAAAAAGTTTTCCATGCAAAAGAA
66 TTTAAGGGATAAA-CTTTGATTTTAAGTAAAATAGGGCAAAG-AAAAGATTTCCATGCAAAAG--
* * * * *
1594605 AAAATCATCAAAATCATTTATCCTGATGAGGGGAATATGTTTATGGTG-CTAAATCAC-AAATGA
127 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCT-AATCACAAAATGA
* * * * * *
1594668 ATGAAGATCATTAC-AAAATCCGTGTTTGTC-CGTTTGAGGCATGAACATAGACTTTATAAAAAT
191 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAAT
* * * *
1594731 T-GTAGGAAAATAG-CTTTCTTGC-AACGCCAAAGCCTCAATA-CGATGTATCATAA-GAGAAGA
256 TGGT-GGAAAAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATC-ATGTATCCTAATGAGAAGA
* * * * *
1594791 CTATGCTTATGGTGCATAATCTTGAAAAGAATGGGGATTTGTATGGACTATAACTG-TTGTCTTA
318 CTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTAT-GACTATTATTGTTTGTCTTA
* * * *
1594855 TTTAAGAGACAAACATTGATTCGATCAAAAAAGTTGGAATG-AAAGCTTTTCTTGCGACA-CAAA
382 TTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAA
* * *
1594918 GCATCCATGTTATGT-TACCTAATGACGGG
447 GCATCAATGTCATGTAT-CCTAATGAAGGG
* * * * *
1594947 ATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGGGAC-GAATACGAGAATCGATGCTTGTC-T
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTG-TTACGAGAATCGATGCTTGTCTT
* * * *
1595010 ATTTAGGGGATGAACTTTGATTTT-AGAAAAATAGGGCAAAGAAAAGATTTCCATGCATAAGAAA
65 ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* * * *
1595074 ATTATCAATATCA-TTATCCTAATGTGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATAA
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
* * * * * * *
1595138 AGATCATTACTAGAACCCATATTTGTCTCATTTGAAGCATGAACATAGACTTTATAAAAATTAGT
195 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* *
1595203 GCGAAAAAAAGCCTTTTTTGCGAAACCAAGGCATCAATATCATGTATCCCT-ATGAGAAGACTAT
260 G-G-AAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTAT-CCTAATGAGAAGACTAT
*** * *
1595267 GTTTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTATTGTTTATCTTATTTAA
322 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAA
* * * * * * * * * *
1595332 GAGATAATCTTTGATTCAATCAAAAACCGTGAAAAGAAAAGCTTTTCCTACAACACTAGAGCATC
387 GAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
1595397 AATGTCATGTATCCTAATGAAGGG
452 AATGTCATGTATCCTAATGAAGGG
* * * * * * *
1595421 ACTATGT-TTTTTTG-TTCCCATCTTTTAAGGAATGGTGACTGTTATGAGAATTGATGCTAGTTT
1 A--ATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCT
* * * *
1595484 TTTTTAAGGGATAAACTTTGATTTAAATTAAAAAAGGGCAAAGAAAAGATTTCCATGCAGAAA-A
64 TATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCA-AAAGA
* * * *
1595548 AAAACATCAATATCATTTACCCTAAGGAAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAA
128 AAATCATCAATATCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* *
1595613 TGAAGATCATTACTAGAATCTATGTTTGTC-CAATTTGAGGCACGGACTTAGACTTTACAAAAAT
192 TGAAGATCATTACTAGAATCCATGTTTGTCTC-ATTTGAGGCACGAACTTAGACTTTACAAAAAT
* ** * * ** *
1595677 TGGTGGTAAAAAGGGTTTTCTTCTTGCGAAGCTAATCCATTAATATCGA-GTAAT-CTAATGAGA
256 TGGTGG-AAAAA-AG-CCT-TTCTTGCGAAACCAAAGCATCAATATC-ATGT-ATCCTAATGAGA
* *
1595740 AGACTATATTTATGGTGCCTAATCTTGAAAAGAATGGGGGATTTGTATGACTATTATTGTTTGTC
315 AGACTATGTTTATGGTGCCTAATCTTGAAAAGAAT-GGGGATTAGTATGACTATTATTGTTTGTC
* * * * * * *
1595805 CTATTTAAAAGACAAATTTTGATTCGATC-AAAACAGGTGCACAGAACAGCTTTTCTTGCAACAC
379 TTATTTAAGAGACAAACTTTGATTCGATCAAAAAC-GGTGGAAAGAAAAGCTTTTCTTGCGACAC
* ** *
1595869 CAAGGCATCAATAACATGTATCCTAATAAAGGG
443 CAAAGCATCAATGTCATGTATCCTAATGAAGGG
** * * * * * * *
1595902 AAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAATGGTGATTGCTATGAGAATCAATCCATGT-TT
1 AATGTGTTTTTGGTTTCCAATCTT-TTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* *
1595965 GATTTAAGGGATAAACTTTGACTTTTAATTAAAATAGGGCAAAGAATAGATTTCCATGCAAAAGA
65 -ATTTAAGGGATAAACTTTGA-TTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
* * * * *
1596030 AAATCATAAATATCATTTATTCTAATGAGAAGAAGGTGTTTATAGTGCCTAATCACGAAATGAAT
128 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * ** * * * *
1596095 GAAGATCATTACTGGAACCCATGTTTGTCTTGTTCGAGGTACGAACTTAGACTTTTCAAAAATTC
193 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTG
* * * * *
1596160 TTGGGAAAAAAGCCTTTCTTGCGAAACCAAATCATCAATATGATGTATCTTAAGGAGAAGACTAT
258 GT-GGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTAT
** * * *
1596225 GTTTATGGTGCCTAATGGTGAAAATGAACGGGGATTAGTATGAGTATTCA-TGTTTGTCTTAATT
322 GTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTATGACTATT-ATTGTTTGTCTTATTT
* * * * * *
1596289 AAGAGGCAAACTTTGGTTCTATCAAAAATGGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAGCA
385 AAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCA
* * *
1596354 TTAATGTCATGTATCATAATAAAGGG
450 TCAATGTCATGTATCCTAATGAAGGG
** * * *
1596380 AATGTGTGTTTTGG-TTCTCAATCTTGAAAAAGAATGGAGACTGTTATGAGAATCAATGCTTGTC
1 AATGTGT-TTTTGGTTTC-CAATCTT-TTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTC
* * **
1596444 TTATTTAAGGGATGAACTTTGA-TTCAAGTAAAATAGGGCAAAGAAAAGATTTTAATGCAAAAGA
63 TTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
** * *
1596508 AAATTGTCAATATCGTTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAATGAG
128 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC-AAAATGAA
* * * * * *
1596573 TGAAGATCACT-CATA-AATCCACGTTTATCTCATTTGAGGCATGAACTTAGAATTTAAAAAAAA
192 TGAAGATCATTAC-TAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTT-ACAAAAA
* * * * *
1596636 TTGGTGGGAAAATGCCTTT-TTGCGAAAGCAAAACATCAATATCGTGTATCCTAATGA-AAGACT
255 TTGGTGGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAC-
* * * * * * ** * * ** * *
1596699 TATGTTTTATGG-CCCCAATCATGAAAA-ATTGGAGATTATTACAACAATCCA-AATTCGTGTTA
319 TATG-TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTAT-TATTGTTTGTCTTA
* * * * * * * *
1596761 TTTGAAG-GACGAACTTTGATTCTAATCGAAAATGATGAAAAGAAAAGGTTCTTTTATG-G-CAC
382 TTT-AAGAGACAAACTTTGATTC-GATCAAAAACGGTGGAAAGAAAAGCTT-TTCT-TGCGACAC
* * * * * * *
1596823 CAAAGCCTTAATGTCTTGTCTCCTAAAGATGGTA
443 CAAAGCATCAATGTCATGTATCCTAATGAAGG-G
*** * ** ** ** * * * *
1596857 AACACGTTTTT-GCTTCCAATC-TCGAAATGAATGAAGACAATTACAAGAATCTAT-ATTGGTGT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAA-GAATGGTGACTGTTACGAGAATCGATGCTT-GTCT
* ** * * * * * * * *
1596919 CATTTGGGGGATGAACTTTGATTTTAAGGAAAAT-GGGTCAAAGAACA-CTTTTCTTG-AGACAT
64 TATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGG-CAAAGAAAAGATTTCCATGCA-AAAG
* * * * * ** * * ** * * ** **
1596981 CAAAGCAACAATATCGTGTATTGTAGTG-GGAAAACATATTTGTAGTGCCTAATCGTTAGCA-G-
127 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGA
* ** * * * * * * * *
1597043 ATGGAGATGGTTA-TGACAACCCATGGTGGTCGCCTTTGAAGG-ATGAACATT-GA-TTCTATAA
191 ATGAAGATCATTACT-AGAATCCATGTTTGTCTCATTTG-AGGCACGAAC-TTAGACTT-TACAA
** * * * * * * * * *
1597104 AAAACGGTGGAAAGAAAAGCTTTTTTTG-AAACACCCACGCATCAATGTTATGCATCCTAACGA-
252 AAATTGGTGG-AA-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATGAG
* * * * * * * * * * ** * * *
1597167 AGTGAATGTGTTTTTAGTTCCCAATCTTGAAAAGAATGGAGACTAGTACGAGAATCAATGCTTGT
314 A-AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGT
* ** * ** * * * * * *
1597232 CTTATTTAAGGGATGAACTTTTATTTTATGAAAAATAGG-GCAAAGAAAAG-ATTTCAATGC-AA
378 CTTATTTAAGAGACAAACTTTGATTCGATCAAAAA-CGGTGGAAAGAAAAGCTTTTC-TTGCGAC
** * * * * * * *
1597294 AGAAAATCATCAGTAATCATTTACCCTATTGAAGAG
441 ACCAAAGCATCAAT-GTCATGTATCCTAATGAAGGG
* * ** ** *** * * ** *
1597330 AATGTGTTTTT-ATAATGCTGGATC--ACAAATGAATTAAGA-TCATTATTG-GAATCCTTGTTT
1 AATGTGTTTTTGGT--TTC-CAATCTTTTAAA-GAATGGTGACT-GTTA-CGAGAATCGATGCTT
* * * * * * * *** *
1597390 GTCTCATTT-AGAGCATAAACTTAGACTTTACA--AAAATTGTTGG--TACAAATCCTTT-CTTG
60 GTCTTATTTAAG-GGATAAACTTTGATTTTA-AGTAAAATAG--GGCAAAGAAAAGATTTCCATG
** ** * * * * * * * * **
1597449 TGAAACCAAA-CATCAATATCGTGTATCATTATGAGAAGACTATGTTTAT-GGGCCTTAATCTTG
121 CAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCC-TAATC-AC
* * * ** * * *
1597512 AAAA-GTAT-AGGGATTAGTATGACTATTA-CC--GTTTGTCTTATTTGATAGCA--AACTTTGA
184 AAAATGAATGA-AGATCA-T-T-ACTAGAATCCATGTTTGTCTCATTTGA-GGCACGAACTTAGA
* **** * * * *
1597570 -TTCGATC-AAAA-CCAAGGAAAGAAATTGCTTTTCTTGCGACACCCAAGCATCAATGTCATGTA
244 CTT-TA-CAAAAATTGGTGGAAA-AAA--GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTA
* * * * ** * * ** * * **
1597632 TCCTAACGA-AGGGAATATGTTT-TGGTACCTAAGCTCTTTTAAGGAATGGTGACAATTACGAGA
304 TCCTAATGAGA-AGACTATGTTTATGGTGCCTAA--TCTTGAAAAGAATGGGGATTAGTATGACT
* * * * * ** * *
1597695 ATCGATT-CTTCTCTTATTT-AGGGAATAAACTTTGATTTTAATTAAAATAAGGT--AAA-AAAA
366 AT-TATTGTTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAA-ACGGTGGAAAGAAAA
** * * * * * ** * * * *
1597755 TATTTCCATCCAAAAGAAAATCATCAATATCATTTATCCTAATG-AGAAG
427 GCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GG
* * * * *** ** * * * * *
1597804 AATATGTTTATAG-TGCCTAATC-ACAAAATGAATGAAGA-TCATTGCTAGAATCCATGTTTGTC
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAA-GAATGGTGACT-GTTACGAGAATCGATGCTTGTC
* * * ** * * * * * * * ** * **
1597866 TCATTTGAGGCACGAACTTAGA-CTTACA--AAAGTTGGTGGAAA-AGATGCCTTCCTTGTGAAA
63 TTATTTAAGGGATAAACTTTGATTTTA-AGTAAAATAGG-GCAAAGAAAAGATTTCCATGCAAAA
** * * * * * **
1597927 CCAAACCATCAATATCATGTATCCTAATGA-GAAAATTATGTTTATGGTGCCTAATCTTGAAAA-
126 GAAAATCATCAATATCATTTATCCTAATGAGGAGAA-TGTGTTTATAGTGCCTAATC-ACAAAAT
** * * ** * * * * *
1597990 GAATGGGGAT--TT-GTATGACTTTAATG-TTGTCTTA-TTGCAAAG-ACAAACTTTGA-TTCGA
189 GAATGAAGATCATTACTA-GA-ATCCATGTTTGTCTCATTTG--AGGCACGAACTTAGACTT-TA
** * * * * * * **
1598048 TCAAAAA-CAGTGAAAAAAAAAGCTTTTCTTGCGACACTATAGCATCAATGTCAACTATCCTAA-
249 -CAAAAATTGGTG--GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
** * * * *** ** * * ** * *
1598111 -AGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTTACT-GTTGTGAGAATCGA-G
311 GAGAA--GACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAG-TATGACTAT-TATT
* * * * * ** * *
1598173 GCTTGTCTTAATGAAGGGATAAACTTTGATTTTAATTAAAATA-GG-GCAAAGAAAAG-TTTTCT
372 GTTTGTCTTATTTAAGAGACAAACTTTGA-TTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCT
* * ** * ** * * *
1598235 ATGCAAAAGAAAATCATCAAAATCATTTATCCTGATGAGGGG
435 -TGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGG
* * *** ** * * *
1598277 AATGTGTTTATGG-TGCCAAATC-ACAAAATGAATGAAGA-TCATTAC-AAAATCCG-TGTTTGT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAA-GAATGGTGACT-GTTACGAGAAT-CGATGCTTGT
* * * * * * * * * * *
1598337 CTCATTTGAGGCATGAACATAGACTTTACA--AAAAT-TGG-TAGGAAAAGAGCCTTT-CTTGCA
62 CTTATTTAAGGGATAAACTTTGATTTTA-AGTAAAATAGGGCAAAGAAAAGA---TTTCCATGCA
** * * * * * * * * * * * * *
1598397 ATGGCAAAGCGTC-ATATGATGTATCGTAAAGAGAAGACTATGCTTATGGTGCATAATC-CTGAA
123 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC--AA
** * ** * * * *
1598460 AA-GAATGGGGAT--TT-GTATGACTATTAATGTTTGTCTTATTTAAGAG-ACAAACACT-GA-T
186 AATGAATGAAGATCATTACTA-GA--ATCCATGTTTGTCTCATTTGAG-GCACGAAC-TTAGACT
* ** * * * * * *
1598518 TCAATCAAAAA-CAGTGGAATGAAAAGCTTTTCTTGCGACACCAAAGGATCCATGTTATGTAT-C
246 T-TA-CAAAAATTGGTGGAA--AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC
* * * * * * ** * ** * * ** * *
1598581 TAATGACG-GGATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGGGACGAATACGAGAATCAA
307 TAATGA-GAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAT
* * * ** ** ** * * * * *
1598645 TGCTTGTCTTATTTAGGGGATGAACTTTGATTTTAAGAAAAATAGG-GCAAAGAAAAGATTTCCA
371 TGTTTGTCTTATTTAAGAGACAAACTTTGATTCGATCAAAAA-CGGTGGAAAGAAAAGCTTTTCT
* ** ** * *
1598709 TGC-ATAAGAAAATTATCAATATCAT-TATCCTAATG-TGGAG
435 TGCGA-CACCAAAGCATCAATGTCATGTATCCTAATGAAGG-G
* * * *** * *** * * * * **
1598749 AATGTGTTTATAG-TGCCTAATCACATAATGAATAAAGA-TCATTACTAGAACCCATATTTGTCT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACT-GTTACGAGAATCGATGCTTGTCT
* * * * * * * * * * *
1598812 CATTTGAA-GCATGAACATAGACTTTATAA--AAATTAGTGCGAA-AAAAGCCTTT--TTGCGAA
64 TATTT-AAGGGATAAACTTTGA-TTT-TAAGTAAAATAGGGCAAAGAAAAG-ATTTCCATGCAAA
** ** * * * * * **
1598871 ACCAAGGCATCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAA
125 AGAAAATCATCAATATCATTTAT-CCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAA
* * * * * * *
1598935 -GAA--AATG-T-ATTAGTATGACTAT-TAT-TGTTATCTTATTTAAGAG-A-TAATCTTTGA-T
188 TGAATGAA-GATCATTACTA-GA--ATCCATGT-TTGTCTCATTTGAG-GCACGAA-CTTAGACT
* ** * * * * * * *
1598990 TCAATCAAAAA-CCGTGAAAAGAAAAGCTTTTCCTAC-AACACTAGAGCATCAATGTCATGTATC
246 T-TA-CAAAAATTGGTG-GAA-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATC
* * * * * ** * * * **
1599053 CTAATGA-AGGGACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGTGACT-GTTATGAGAATT
306 CTAATGAGA-AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAG-TATGACTATT
* * * * * ** * * * * *
1599116 GA-TGCTAGT-TTTTTTAAGGGATAAACTTTGATTTAATTAAAAAAGG-GCAAAGAAAAGATTTC
369 -ATTGTTTGTCTTATTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTT
* ** ** * *
1599178 CATGCAGA-AGAAAATTATCAATATCAT-TATCCTAATG-TGGAG
433 CTTGC-GACACCAAAGCATCAATGTCATGTATCCTAATGAAGG-G
* * * *** * *** * * * * **
1599220 AATGTGTTTATAG-TGCCTAATCACATAATGAATAAAGA-TCATTACTAGAACCCATATTTGTCT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACT-GTTACGAGAATCGATGCTTGTCT
* * * * * * * * * ** *
1599283 CATTTGAA-GCATGAACATAGACTTTATAA--AAATTAGTGCGAA-AAAAGCCTTT-TTTGCGAA
64 TATTT-AAGGGATAAACTTTGA-TTT-TAAGTAAAATAGGGCAAAGAAAAG-ATTTCCATGCAAA
** ** * * * * * **
1599343 ACCAAGGCATCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAA
125 AGAAAATCATCAATATCATTTAT-CCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAA
* * * * * * *
1599407 -GAA--AATG-T-ATTAGTATGACTAT-TAT-TGTTATCTTATTTAAGAG-A-TAATCTTTGA--
188 TGAATGAA-GATCATTACTA-GA--ATCCATGT-TTGTCTCATTTGAG-GCACGAA-CTTAGACT
*** * * * * * * *
1599461 TT-CAATCAAAACCGTGAAAAGAAAAGCTTTTCCTAC-AACACTAGAGCATCAATGTCATGTATC
246 TTACAA--AAATTGGTG-GAA-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATC
* * * * * ** * * * **
1599524 CTAATGA-AGGGACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGTGACT-GTTATGAGAATT
306 CTAATGAGA-AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAG-TATGACTATT
* * * * * * ** * * * *
1599587 GA-TGCTAGTTTTTTTTAAGGGATAAACTTTGATTTAAATTAAAAAAGG-GCAAAGAAAAGATTT
369 -ATTGTTTGTCTTATTTAAGAGACAAACTTTGA-TTCGATCAAAAACGGTGGAAAGAAAAGCTTT
* * ** * * * *
1599650 CCATGCAGA-AAAAAAACATCAATATCATTTACCCTAA-GAAGGAG
432 TCTTGC-GACACCAAAGCATCAATGTCATGTATCCTAATGAAGG-G
* * * * *** ** * * * *
1599694 AATATGTTTATAG-TGCCTAATC-ACAAAATGAATGAAGA-TCATTACTAGAATCTATGTTTGTC
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAA-GAATGGTGACT-GTTACGAGAATCGATGCTTGTC
** * * *** * * * * ** * * * *
1599756 CAATTTGAGGCACGGACTTAGACTTTACA--AAAATTGGTGGTAAA-AAGGGTTTTTCTTGC-GA
63 TTATTTAAGGGATAAACTTTGATTTTA-AGTAAAA-TAG-GGCAAAGAAAAGATTTCCATGCAAA
** * * * * * * * * **
1599817 AGCTAATCCATTAATATCGAGTAAT-CTAATGAGAAGACTATATTTATGGTGCCTAATCTTGAAA
125 AGAAAAT-CATCAATATC-ATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAA
** * * * * * * *
1599881 A-GAATGGGGAT--TT-GTATGACTAT-TATTGTTTGTC-CTATTTAAAAG-ACAAATTTTGA-T
187 ATGAATGAAGATCATTACTA-GA--ATCCA-TGTTTGTCTC-ATTT-GAGGCACGAACTTAGACT
* * * * * *
1599938 TCGATCAAAACA--GGTGCACAGAACAGCTTTTCTTGC-AACACCAAGGCATCAATAACATGTAT
246 T-TA-CAAAA-ATTGGTGGA-A-AAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTAT
** * * * * * **
1600000 CCTAAT-A-AAGGGAAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAATGGTGATT-GCTATGAGA
305 CCTAATGAGAA--GACTATGTTTATGGTGCCTAATCTTG-AAAAGAATGGGGATTAG-TATGACT
* * *** * * ** * * *
1600061 ATCAATCCATGT-TTGATTTAAGGGATAAACTTTGACTTTAATTAAAATA-GG-GCAAAGAATAG
366 ATTATTGTTTGTCTT-ATTTAAGAGACAAACTTTGA-TTCGATCAAAA-ACGGTGGAAAGAAAAG
* * * * * ** * * * * * *
1600123 ATTTCCATGCAAAAGAAAATCATAAATATCATTTATTCTAATG-AGAAG
428 CTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GG
* * * * *** ** * * * *
1600171 AAGGTGTTTATAG-TGCCTAATC-ACGAAATGAATGAAGA-TCATTACTG-GAACCCATGTTTGT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAA-GAATGGTGACT-GTTAC-GAGAATCGATGCTTGT
* ** * ** * * ** * * *
1600232 CTTGTTCGAGGTACGAACTTAGACTTTTCAA--AAATTCTTGG--AA-AAAAGCCTTT-CTTGCG
62 CTTATTTAAGGGATAAACTTTGA-TTTT-AAGTAAAAT-AGGGCAAAGAAAAG-ATTTCCATGCA
** * * * * * * * * ***
1600291 AAACCAAATCATCAATATGATGTATCTTAAGGAGAAGACTATGTTTATGGTGCCTAATGGTGAAA
123 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAAT-CACAAA
* ** * * * * * * * *
1600356 ATGAACGGGGATTAGTA-TGAGTATTCATGTTTGTCTTAATTAAGAGGCA--AACTTTG-GTTCT
187 ATGAATGAAGATCATTACT-AGAATCCATGTTTGTC-TCATT-TGAGGCACGAACTTAGACTT-T
** * * * *
1600417 ATCAAAAA-TGGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAGCATTAATGTCATGTATCATAA
248 A-CAAAAATTGGTGGAAA--AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * * * * ** * *
1600481 T-A-AAGGGAATGTGTTTTTGGT-TCTCAATCTTGAAAAGAATGGAGACT-GTTATGAGAATCAA
310 TGAGAA--GACTATGTTTATGGTGCCT-AATCTTGAAAAGAATGGGGATTAG-TATGACTATTAT
* * ** * * *
1600542 TGCTTGTCTTATTTAAGGGATGAACTTTGATTTCAAGT-AAAATA-GG-GCAAAGAAAAGATTTT
371 TGTTTGTCTTATTTAAGAGACAAACTTTGA-TTCGA-TCAAAA-ACGGTGGAAAGAAAAGCTTTT
** * * ** *** * * *
1600604 AATGCAAAAGAAAATTGTCAATATCGTTTATCCTAATG-AGGAG
433 CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGG-G
* * * *** * ** ** * * * * * *
1600647 AATGTGTTTATAG-TGCCTAATC-ACAAAATGAGTGAAGATCACTCA-TAGAATCCACGTTTATC
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAA-GAATGGTGA-CTGTTACGAGAATCGATGCTTGTC
* * * * * * * * * * * *
1600709 TCATTTGAGGCATGAACTTAGAATTTAA-AAAAATTGGTG---GGAAAATGCCTTT--TTGCGAA
63 TTATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGG-GCAAAGAAAA-G-ATTTCCATGCAAA
* * ** * * * *
1600768 AGCAAAA-CATCAATATCGTGTATCCTAATGAAAAGACTATGTTTAT-G-GCCCCAATCATGAAA
125 AG-AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG-CCTAATCA-CAAA
* * * * * ** * * * *
1600830 A--ATTGGAGATTATTACAACAATCCAAATTCGTGTTATTTGAAGG-ACGAACTTTGA-TTCTAT
187 ATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTG-AGGCACGAACTTAGACTT-TA-
* * * * * * * * * *
1600891 CGAAAA-TGATGAAAAGAAAAGGTTCTTT-TATG-G-CACCAAAGCCTTAATGTCTTGTCTCCTA
249 CAAAAATTGGTG-GAA-AAAA-G-CCTTTCT-TGCGAAACCAAAGCATCAATATCATGTATCCTA
* * * * * * * * * ** * *
1600952 AAGATGGTA-AC-ACGTTTTTGCTTCCCAATCTCGAAATGAATGAAGACAATTA-CAAGAATCTA
309 ATGA--GAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATG--G-GGATTAGTATG-A-CTA
* ** * ** ** *** * * *
1601014 -TATTG-GTGTC--ATTTGGGGGATGAACTTTGATTTTAAGGAAAATGG-GTCAAAGAACA-CTT
367 TTATTGTTTGTCTTATTTAAGAGACAAACTTTGATTCGATCAAAAACGGTG-GAAAGAAAAGCTT
* * * * * ** *
1601073 TTCTTGAGACATCAAAGCAACAATATCGTGTATTGTAGTG--GGG
431 TTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGG
**** * * * * * * * * * * *
1601116 AAAACATATTT-GTAGTGCCTAATC-GTTAGCAG-ATGGAGA-TGGTTATGACAACCCATGGTGG
1 AATGTGTTTTTGGT--TTCC-AATCTTTTA-AAGAATGGTGACT-GTTACGAGAATCGATGCTTG
*** * * * * * * ***
1601177 TCGCCTTTGAA-GGATGAACATTGATTCT-A-TAAAAAACGGTGGAAAGAAAAGCTTTTTTTG-A
61 TCTTATTT-AAGGGATAAACTTTGATTTTAAGTAAAATA-GG-GCAAAGAAAAGATTTCCATGCA
** ** * * ** * * * * * * **
1601238 AACACCAACGCATCAATGTTATGCATCCTAACGAAGTGAATGTGTTTTTAGTTCCCAATCTTGAA
123 AA-AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAA
* * * * * * * * ** *
1601303 AA-GAATGGAGA-CTATTACGAGAATCAATGCTTGTCTTATTTAAGGGATGAACTTTTATTTTAT
186 AATGAATGAAGATC-ATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA-
* * * * * * ** * * * * *
1601366 GAAAAATAGG-GCAAAGAAAAG-ATTTCAATGCAAAAGAAAATCATCAGTATCATTTACCCTATT
249 CAAAAATTGGTG-GAA-AAAAGCCTTTC-TTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * ** * ** * *** * * **
1601429 GA-AGAGAATGTGTTTATAATG-CTGGATC-ACAAATGAATTAAGATCATTATTGGA--ATCCTT
311 GAGA-AGACTATGTTTATGGTGCCT-AATCTTGAAAAGAATGGGGATTAGTA-T-GACTATTATT
* * * * * * * * * *
1601489 GTTTGTCTCATTT-AGAGCATAAACTTAGACTT-TA-CAAAAATTGTTGG-TACAAATGCCTTTC
372 GTTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAAA-CGGTGGAAAGAAAAGCTTTTC
* * * * * * * *
1601550 TTGTGAAACCAAACCATCAATATCGTGTATCATTATG-AGAAG
434 TTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GG
* * * * ** * * * ** *
1601592 ACTATGTTTATGG--GCCTTAATCTTGAAAAGTATAGG-GATTAGTATGACTATTACCG-T--TT
1 AATGTGTTTTTGGTTTCC--AATCTTTTAAAGAAT-GGTGACT-GT-T-ACGAGAATCGATGCTT
* ** * ** *** * * * * * * *
1601651 GTCTTATTTGATAGACAAACTTTGATTCGATCAAAAACCAAGG-AAAGAAATGCTTTTCTTGCGA
60 GTCTTATTTAAGGGATAAACTTTGATTTTAAGTAAAA-TAGGGCAAAGAAAAGATTTCCATGCAA
* ** * * * * * * * * ****
1601715 CACCAAAGCATCAATGTCATGTATCCTAACGAAGG-GAATATGTTTTTGGTACCTAATCTTTTAA
124 AAGAAAATCATCAATATCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATCACAAAA
* ** * * * * * * ** * *
1601779 GGAATGGTGA-CAATTACGAGAATCGAT-TCTTCTCTTATTTTAGGGATAAACTTTGATTTTA-A
188 TGAATGAAGATC-ATTACTAGAATCCATGT-TTGTCTCATTTGAGGCACGAACTTAGACTTTACA
* * *** * * * ** * *
1601841 TTAAAATAAGGT-AAAAAAAATATTTCCATCCAAAAGAAAATCATCAATATCATTTATCCTAATG
251 --AAAAT-TGGTGGAAAAAAGCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATG
* * ** ** * **
1601905 AGAAGAATATGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCA-T-TG-CTAGAATCCATG
312 AGAAGACTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTATGACTATTAT---TG
* * * * * ** * * * *
1601966 TTTGTCTCATTTGAG-GCACGAACTTAGACTT-TA-CAAAAGTTGGTGGAAA-AGATGCCTTCCT
373 TTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCT
* * * * **
1602027 TGTGAAACCAAACCATCAATATCATGTATCCTAATG-AGAA
435 TGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGG
* * * ** * * * ** ** *
1602067 AATTATGTTTATGG-TGCCTAATCTTGAAAAGAATGGGGA-TTTGTATGA-CTTTAATGTTTGTC
1 AA-TGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGT-TACGAGAATCGATGCTTGTC
* * * ** *** * * * * * * * * *
1602129 TTATTGCAA-AGACAAACTTTGATTCGATCAAAAACAGTG-AAAAAAAAGCTTTTCTTGCGACAC
63 TTATT-TAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
* * * * ** * * * * * ****
1602192 TATAGCATCAATGTCAACTATCCTAAAGAAGGGAAAATGT-TTT-TGGTTCCCAATCTTTTTAA-
127 AAAATCATCAATATCATTTATCCTAATG-A-GGAGAATGTGTTTATAGTGCCTAATC-ACAAAAT
* ** * * * * * * ** * *
1602254 GAATG--G-TTACTGTTGTGAGAATCGAGGCTTGTCTTA-ATGAAGGGATAAACTTTGATTTTA-
189 GAATGAAGATCA-T-TACT-AGAATCCATGTTTGTCTCATTTG-AGGCACGAACTTAGACTTTAC
* * * * ** * * * *
1602314 ATTAAAATAGG-GCAAAGAAAAG-TTTTCTATGCAAAAGAAAATCATCAAAATCATTTATCCTGA
250 A--AAAATTGGTG-GAA-AAAAGCCTTTCT-TGCGAAACCAAAGCATCAATATCATGTATCCTAA
** * * * ** ** * * * ** ***
1602377 TGAGGGGAATGTGTTTATGGTGCCAAATC-ACAAAATGAATGAAGATCATTA-CAAAATCCGTGT
310 TGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTATGACTATTATTGT
* * * * * * * *
1602440 TTGTCTCATTT--GAGGCATGAACATAGACTT-TA-CAAAAATTGGTAGG-AA-AAGAGCCTTTC
374 TTGTCTTATTTAAGAGACA--AACTTTGA-TTCGATCAAAAA-CGGT-GGAAAGAAAAGCTTTTC
* *** * * * * * *
1602499 TTGCAATGGCAAAGCGTCAATATGATGTATCGTAAAG-AGAAG
434 TTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GG
* * * * * * * ** * * * ** ** *
1602541 ACTATGCTTATGG-TGCATAATCCTGAAAAGAATGGGGA-TTTGTATGACTATTAATGTTTGTCT
1 AATGTGTTTTTGGTTTC-CAATCTTTTAAAGAATGGTGACTGT-TACGAGAATCGATGCTTGTCT
* * ** * * * * * * * *
1602604 TATTTAAGAGACAAACACTGA-TTCAA-TCAAAAACAGTGG-AATGAAAAGCTTTTCTTGCGACA
64 TATTTAAGGGATAAACTTTGATTTTAAGT--AAAATAG-GGCAAAGAAAAGATTTCCATGCAAAA
** ** * * * * * * * * * ***
1602666 CCAAAGGATCCATGTTATGTAT-CTAATGACGG-GATTGTGTTTTTGGTTCCCAATCTTTTAAAT
126 GAAAATCATCAATATCATTTATCCTAATGA-GGAGAATGTGTTTATAGTGCCTAATC-ACAAAAT
** * * * * * * * * * *
1602729 -AATGGGGA-CGAATACGAGAATCAATGCTTGTCTTATTT-AGGGGATGAACTTTGATTTTAAGA
189 GAATGAAGATC-ATTACTAGAATCCATGTTTGTCTCATTTGA-GGCACGAACTTAGACTTT-ACA
* * * * ** **
1602791 AAAATAGG-GCAAAGAAAAG-ATTTCCATGC-ATAAGAAAATTATCAATATCAT-TATCCTAATG
251 AAAATTGGTG-GAA-AAAAGCCTTT-CTTGCGA-AACCAAAGCATCAATATCATGTATCCTAATG
* * * * * ** * *** * * *
1602852 TGGAGAATGTGTTTATAGTGCCTAATC-ACATAATGAATAAAGATCATTACTAGAACCCA-TA--
312 AGAAGACTATGTTTATGGTGCCTAATCTTGA-AAAGAATGGGGATTAGTA-T-G-A-CTATTATT
* * * * * **
1602913 -TTTGTCTCATTTGA-AG-CATGAACATAGACTT-TAT-AAAAATTAGTGCG-AA-AAAAGCCTT
372 GTTTGTCTTATTTAAGAGACA--AACTTTGA-TTCGATCAAAAA-CGGTG-GAAAGAAAAG-CTT
* * * *
1602971 TT-TTGCGAAACCAAGGCATCAATATCATGTATCCCT-ATG-AGAAG
431 TTCTTGCGACACCAAAGCATCAATGTCATGTAT-CCTAATGAAG-GG
* * * * ** * * ** * *
1603015 ACTATGTTTATGG-TGCCTAATCTTGAAAAGAAAAT-GT-ATTAG-TATGACTAT-TATTG-TTA
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAG--AATGGTGACT-GTTACGAGAATCGA-TGCTTG
* * * * * * *
1603074 TCTTATTTAAGAGATAATCTTTGA-TTCAA-TCAAAA-ACCGTGAAAAGAAAAGCTTTTCC-TAC
61 TCTTATTTAAGGGATAAACTTTGATTTTAAGT-AAAATA--GGGCAAAGAAAAG-ATTTCCATGC
* ** * * * * * * * * * * ****
1603135 AACACTAGAGCATCAATGTCATGTATCCTAATGAAGG-GACTATGTTTTTTGTTCCCAATCTTTT
122 AAAAGAAAATCATCAATATCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATCACAA
* ** * ** * * ** * * ** *
1603199 AAGGAATGGTGA-CTGTTA-TGAGAATTGATGCTAGT-TTTTTTAAGGGATAAACTTTGA-TTTA
186 AATGAATGAAGATC-ATTACT-AGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* ** * * * * * * *
1603260 AATTAAAAAAGG-GCAAAGAAAAG-ATTTCCATGCAGAAA-AAAATCATCAATATCATTTACCCT
249 CA--AAAATTGGTG-GAA-AAAAGCCTTT-CTTGC-GAAACCAAAGCATCAATATCATGTATCCT
* * * ** ** * *
1603322 AA-GAAGGAGAATATGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCATTACTAGA--ATC
308 AATG-AGAAGACTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTA-T-GACTAT-
* * ** * * * * * *
1603383 TA-TGTTTGTCTAATTTGAG-GCACGGACTTAGACTT-TA-CAAAAATTGGTGGTAA-AAAGGGT
368 TATTGTTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAAA-CGGTGGAAAGAAAAGCT
* ** * * *
1603443 TTTCTTGCGA-AGCTAATCCATTAATATCGA-GTAAT-CTAATG-AGAAG
430 TTTCTTGCGACA-CCAAAGCATCAATGTC-ATGT-ATCCTAATGAAG-GG
* * * * * ** * * * ** * *
1603489 ACTATATTTATGG-TGCCTAATCTTGAAAAGAATGGGGA-TTTGTATGACTAT-TATTGTTTGTC
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGT-TACGAGAATCGA-TGCTTGTC
* ** * * * * * * * *
1603551 CTATTTAAAAGACAAATTTTGA--TT-AGATCAAAACAGGTGCACAGAAAAGCTTTTCTTGCAAC
63 TTATTTAAGGGATAAACTTTGATTTTAAG-T-AAAATAGG-GCAAAGAAAAGATTTCCATGCAAA
** ** * * * * * * * ****
1603613 ACCAAGGCATCAATAACATGTATCCTAATAAAGGGAAAATGT-TTT-TGGTTCCCAATTTGTTAA
125 AGAAAATCATCAATATCATTTATCCTAAT-GA-GGAGAATGTGTTTATAGTGCCTAA-TCACAAA
** *** * *** * * * * ** * *
1603676 A-GAATGGTGATTGCTA-TAAGAATCAATCCATGTTTGATTTAAGGGATAAACTTTGATTTTA-A
187 ATGAATGAAGATCATTACT-AGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACA
* * * ** * ** * * *
1603738 TTAAAATAGG-GCAAATAATAG-ATTTCCAAGCAAAAGAAAATCATAAATATCATTTATCCTAAT
251 --AAAATTGGTGGAAA-AA-AGCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAAT
* * * ** * ** * * **
1603801 GAGAAGAATGTGTTTATAGTGCCTAATCACGAAATGAATGAAGATCATTACTGGA--ACCCA-TG
311 GAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTA-T-GACTA-TTATTG
* ** * * * * * *
1603863 TTTGTCTTGTTCGAG-GTACGAACTTAGACTT--TTCAAAAATTC-TTGGGAA-AAAAGCCTTTC
373 TTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAAA--CGGTGGAAAGAAAAGCTTTTC
* * * * * * *
1603923 TTGCGAAACCAAATCATCAATATGATGTATCTTAA-GGAGAAG
434 TTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GG
* * * ** * * *** * * * * *
1603965 ACTATGTTTATGGTGACTAATGGTGGAAAAGAATGGGGATTAG-TATGAGTATTC-ATGTTTGTC
1 AATGTGTTTTTGGTTTCCAAT-CTTTTAAAGAATGGTGACT-GTTACGAG-AATCGATGCTTGTC
* * * * * * * * * * * * *
1604028 TTAATTAAGAGG-CAAACTCTGGTTCT-A-TCAAATATGGTGGAAAGGAAAGTTTTTCTTGCGAC
63 TTATTTAAG-GGATAAACTTTGATTTTAAGTAAAATA-GG-GCAAAGAAAAGATTTCCATGCAAA
** * * * * * * * * * **
1604090 ACCAAAGCATCAATGTCATGTATCATAATAAAGG-GAATGTGTTTTTGGTTCTTAATCTTGAAAA
125 AGAAAATCATCAATATCATTTATCCTAAT-GAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAA
* * * * * * * *
1604154 -GAATG--GATACTGTTACGAGAATCAAT-TCTTGTCTTATTTAAGGGATGAACTTTGA-TTT-C
188 TGAATGAAGAT-C-ATTACTAGAATCCATGT-TTGTCTCATTTGAGGCACGAACTTAGACTTTAC
* * ** ** * ** * * *
1604213 AAGTAAAATAGG-GCAAACAAAAGATTTTAATGCAAAAGAAAATCATCAATATCGTTTATCCTAA
250 -A--AAAATTGGTG-GAA-AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
* * * * ** * ** * * **
1604277 TGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAGTGAAGATCATTCATAGA--ACCCA-
310 TGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGT-AT-GACTA-TTAT
* * * * * * * * *
1604338 CGTTTATCTCATTTGAG-GCACGAACTTAGACTT-TA-CAAAAATTGGTGG---GAAAATGCCTT
371 TGTTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCGATCAAAAA-CGGTGGAAAGAAAA-GCTTT
* * ** * * * **
1604397 TCTTGCAAAAGAAAAACATCAATATCGTGTATCCTAATGAAAAG
432 TCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGG
* * * ** * * * * * * * * ** *
1604441 ACTATGTTTATGG-CCCCAATC-ATGAAA-AATTGGAGATTATTACAACAATCCA-AATTCGTGT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAA-TGGTGACTGTTACGAGAATCGATGCTT-GTCT
** * * * * * **
1604502 TATTTGAA-GGACGAACTTTGATTCTATCG-AAAAT-GATGAAAAGAAAAGGTTCTTTTATGGC-
64 TATTT-AAGGGATAAACTTTGATTTTA-AGTAAAATAG-GGCAAAGAAAA-GAT-TTCCAT-GCA
** * * * * * * * * * *
1604563 --ACCAAAGCCTTAATGTC-TTGTCTCCTAAAGATGGTA-ACACGT-TTT-T-GCTTCCCAATCT
123 AAAGAAAATCATCAATATCATT-TATCCTAATGA-GG-AGA-ATGTGTTTATAG-TGCCTAATCA
* ** * * * * * * * *
1604621 CGAAATGAATGAAGAAAATTACAAGAATCTATATTGGTCTCATTTTTG-GGGATGAACTTTGATT
183 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCA--TTTGAGGCACGAACTTAGACT
* ** * * * * * * * **
1604685 TTA-AGGAAAATGGGTCAAAGAAAAACTTTTCTTGAGACATCAAAGCAACAATATCTTGTATTGT
246 TTACA--AAAATTGGTGGAA-AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCT
* * * * * * ** * * * **
1604749 AGTGGGGAGAAC-ATATTTGTAGTGCCTAATCGTT-AGCAG-ATGGAGA-TGGTTATGACAACCC
308 AATGAGAAG-ACTATGTTTATGGTGCCTAATC-TTGAAAAGAATGGGGATTAG-TATGACTA-TT
* *** ** * * * *
1604810 A-TGGTTGTCGCCTTTGAAG-GATGAACATTGATTCTATAAAAAACGATGGAAAGAAAAGC-TTT
369 ATTGTTTGTCTTATTT-AAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTT
** * * * * *
1604872 CTTTGAAACACCAAAGCATCAATGTTATGCATTCTAACGAAGAG
433 C-TTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGG
* * ** * * *
1604916 AATGTGTTTTTAGTTCCCAATCTTGAAAAGAATTGAGACTATTACGAGAATCGATGCTTGTCTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * * * *
1604981 TTTAAGGGATGAACTTTTATTTTATGAAAAATAGGGCAAAGAAAAGATTTTCATGTAAAAGAAAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* * * * ** *
1605046 TCATCAGTATCATTTACCCTATTGA-GAGAATGTGTTTATAATGCCGGATCACAAAATGAATTAA
131 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
* * * *
1605110 GATCATTACTGGAATCCTTGTTTGTCTCATTT-AGAGCA-TACACTTAGACTTTACAAAAATTGC
196 GATCATTACTAGAATCCATGTTTGTCTCATTTGAG-GCACGA-ACTTAGACTTTACAAAAATTGG
* * * * * * *
1605173 TGGTACAAATGCCTTTCTTGTGAAACCAAACCATCAATATCGTGTATCATTATGAGAAGACTATG
259 TGG-AAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATG
* * * *
1605238 TTTATGG-GCCTTAATCTTGAAAAGTATAGGGATTAGTATGACTATTACTGTTTGTCTTATTTGA
323 TTTATGGTGCC-TAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAA
* ** **
1605302 TAGACAAACTTTGATTCGATCAAAAACCATGGAAAGAAATTCTTTTCTTGCGACACCAAAGCATC
387 GAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
*
1605367 AATGTCATGTATCCTAACGAAGGG
452 AATGTCATGTATCCTAATGAAGGG
* * ** * * *
1605391 AATATGTTTTTGG-TTCCTAATCTTTTAAGGAATGGTGACAATTGCGAGAATCGATTCTTCTCTT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * * * * *
1605455 TTTTAAGGGATAAACTTTGATTTCAATTAAAATTA-GGTAAAGAAAATATTTCCATCCAAAAGAA
65 ATTTAAGGGATAAACTTTGATTTTAAGTAAAA-TAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * *
1605519 AATCATCAATATCATTTATTCTAATGAGGAGAATATGTTTATAGTGCCTAATAACAAAATGAATG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* *
1605584 AAGATCATTGCTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAGTTGG
194 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * * * ** ** * * *
1605649 TGTTAAAGAAA-CCCTTATTGCAAAATGAAAGGGTCAATATAATGTATCCTAATGGGATGACTAT
259 TG-GAAA-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTAT
* * * *
1605713 GTTTATGGTGCCTAAGCGTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTT-TTTAA
322 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTT-A
* * *
1605777 AGAGACAAACTTTGATT-GAATAAAAAACGGAGGAAAGAAAAACTTTTCTTGCGACACCAAAGCA
386 AGAGACAAACTTTGATTCG-ATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCA
*
1605841 TCAATGTCATGTAACCTAATGAAGGG
450 TCAATGTCATGTATCCTAATGAAGGG
* * * * * *
1605867 AATGTGTTTTTGG-TTCCTAATTTTTTAAAAAATGGAGACTGTTACGAGAATCAATTCTTGCCTT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * * * * * * *
1605931 GTTTAAAGGATGAACTTTGATTTTCAGAAAAATAGGGTAAAGAAAAGATTTCTATGAAAAAGAAA
65 ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* * * * * *
1605996 ATCATCAATATCATTTAACCTAATGAGGAGAAT-TATTTATAGTGCCGAATCACATAACGTATGA
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
* * * * * * ** ***
1606060 AGATCATT-TTCGGAACCCATGTTTGTCTTATTTGAGGCACAAACTTATACTTTGTAGCGATTGG
195 AGATCATTACT-AGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * * * *
1606124 TGCGAGAAAAGCCTTTCTTGTGAAACCAAGGCATCAATATCGTGCATCCTAATGAGAAGACTATG
259 TG-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATG
* * *
1606189 TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTGTGACTATTCA-TGTTTGTCTTATATAT
323 TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATTGTTTGTCTTATTTAA
* * * * * * *
1606253 GACACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGCTTTTCTTACGATACCAAAACATC
387 GAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
*
1606318 AATGTCAAGTATCCTAATGAAGGG
452 AATGTCATGTATCCTAATGAAGGG
* ** * * ** * *
1606342 AATGTGTTTTTTG-TTCCAATCTTGAAAAGAATGGAGACTATTACGAGAATTAATGATTGTCGTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * *
1606406 TTTTAA-GGA-AGAACTTTGATTTCAAGGAAAATAAGGCAAAGAAAAGATTTTCATGCAAAAGAA
66 -TTTAAGGGATA-AACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * * *
1606469 AATCTTCAATATCATTTATCCTAATAAGGAGAATATGTTTATAGCGCCTAATCACATAATGAATG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * * * * * *
1606534 AAGATCATTACTAGAACCCTTGTTTGGCTCATTTGAGGCATGAACTTAGACTTTATAGAATTTGG
194 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * ** * * * ** * *
1606599 TGGGAATAAAGCTTTTCTTATGAAACCAAGGCATCAATGTCGTGTATCCTTGTGAAAAAACTATG
259 T-GGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATG
* *
1606664 TTTATGGTGCC---TC-CGAAAAAGAATGGGGATTAGTATGACTCTTATTGTTTGTCTTATTTAA
323 TTTATGGTGCCTAATCTTG-AAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAA
* * * *
1606725 AAGACAAACTTTAATTCGATCAAAAACGATGGAAAGAAAAGCATTTCTTGCGACACCAAAGCATC
387 GAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
1606790 AATGTCATGTATCCTAATGAAGGG
452 AATGTCATGTATCCTAATGAAGGG
** * * * * *
1606814 AAAATGTTTTTGGTTCCCAATCTTTTAAAAAATGGTGACTATTATGAGAATCGATGCTTGTCTTC
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* *** * *
1606879 TTTAAGGAATAAACTTTGATTTTTTTTTTAAAATAGGGCAAAGAAAATATTTCCAAGCAAAAGAA
66 TTTAAGGGATAAACTTTGA--TTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * * *
1606944 AATCTTTAATATCATTTATCC---TCA-G-G-A-GT-TTGA-A-TG--T-GTCACAAAATGAATG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * *
1606996 AACATCATTACTAGAATCCATGTTTGTCTCCTTTAAGGCACGAACTTAGACTTTACAAAAATTGG
194 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * * * * *
1607061 TGGTAGAAATGCCTTTCTTGTGAAACCAAACCATCAATATCATGTATCCTAATAAGAAAACT-TG
259 TGG-AAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATG
* * * * * * * * *
1607125 TTTATCGTGGCTAATCTTGAAAAGAATGAGGATTTGTATGACTAGTAATGTTTATGTTGTTTAAG
323 TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAG
*
1607190 AGACAAACTTCGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
388 AGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
* ** * *
1607255 GTGTCGCGTATCCTAATAAAGGA
453 ATGTCATGTATCCTAATGAAGGG
* * * * * * * *
1607278 AATGTATTTTTGGTTTGCAATCTTTTAAAGAGTGGAGGCTGTTACAAGAATTGATTCTTGTCTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * *
1607343 TTTAAGGGGTGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCACAG-AAAAGAAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCA-TGCAAAAGAAA
* * *
1607407 ATCATCAATATCATTTATCCTAATAAGGAGAACGTGTTTATAGTGCCTAGTCACAAAATGAATGA
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
* * * * * * * * * *
1607472 AGATCATTACTGGAACCCAT-CTTATCTCATTAGAGGCATGAACTTAGACTTTGCAGAATTTAGT
195 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* * * * * *
1607536 GTGAAAAAAACCTTTCTTGTGAAACCAAGGCAACAATATCATGTA-CCATTATGAGAATACTATG
260 G-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC-TAATGAGAAGACTATG
* * *
1607600 TTTATGG-GTCCTAATCTTGAAAAGTATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTGA
323 TTTATGGTG-CCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAA
* * * * *
1607664 GAGA-AAACTTTGATTTGATCATAAA-GCATGGAAAGAAAAGCTTTTCTTGTGACACCAAAGAAT
387 GAGACAAACTTTGATTCGATCAAAAACG-GTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
1607727 CAATGTCATGTATCCTAATGAAGGG
451 CAATGTCATGTATCCTAATGAAGGG
* ** * * * *
1607752 AATATGTTTTTGG-TTCCTAATCTTTTAGTGAATGGTGACTATTACAAGAATCGATTCTTCTCTT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* *
1607816 ATTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGTAAAGAAAAGATTTCCATGCAAAA-AAA
65 ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* * *
1607880 ATTTATCAATATCATTTATCCTAATGCGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATG
130 A-TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * * * * *
1607945 AAGGTTATTACTAGAGTCCATGTTTGCCTCATTTGAGGCATGAATTTAGACTTTACAAAAATTGG
194 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * *
1608010 CGGGAAAAAAG-CTCTTCTTGCAAAACCAAAGCATCAATATGATGTATCCTAATGAGAAGACTAT
259 -TGGAAAAAAGCCT-TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTAT
* * * * * * *
1608074 GTTTATGGTGCCTAACCCTAAAAAAAATGGGGATTTGTATGGCTATTAATGTTTGTCGTT-TTTA
322 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTC-TTATTTA
* * ** *
1608138 GGAGACAAACTTTGATTCAATCAAAAGTGGTGGAAAGAAAAACTTTTCTTGCGACACCAAAGCAT
386 AGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
1608203 CAATGTCATGTATCCTAATGAAGGG
451 CAATGTCATGTATCCTAATGAAGGG
* * * * * *
1608228 CATGTGTTTTTGG-TTCCTAATCTTTTAAAGAATGGAGACTATTACAAGAATCAATTCTTGTCTT
1 AATGTGTTTTTGGTTTCC-AATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * * * * *
1608292 ATTTAAGGGATGAACTTTGATTTTAAGAAAAAATAGGGTAAAGAGAAGATTTACATGCAAAAAAA
65 ATTTAAGGGATAAACTTTGATTTTAAG-TAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * * * *
1608357 AATCATCAATATCATTTATCCTAATGAGAAGAAT-CGTTTATAGTGACTAATGACATAATGAGTG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
** * * * * * * * *
1608421 AAGATC-TTTGTCGGAAACCATATTTGTATCATTTGAGGCACAAACTTATACTTTATAAAAAGTG
194 AAGATCATTACT-AGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTG
* * * * **
1608485 GTGCAGAAAAAGCCTTTCTTGCGAAACCAAGGAATCAATATCATGTATTCTAACAAGAAGACTAT
258 GTGGA-AAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTAT
* * * *
1608550 GTTTATGGTGCCTAATCTTAAAAAGAATAGGGATTAGTATTACTATTGATT-TTTGTCTTATATA
322 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATTGTTTGTCTTATTTA
** ** * * *
1608614 AGACG-CAAACTTTGATTATATCAAAAATAGTGGAAGGAAAAGCTTTTCTTGTGACA-CAAAACA
386 AGA-GACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCA
*
1608677 TCAATGTCAAGTATCCTAATGAAGGG
450 TCAATGTCATGTATCCTAATGAAGGG
* * ** * * * * * *
1608703 AATGTGTTTTTCG-TTCCAATATTGAAAAGAATGGAGACTATTACCAGAAT-TAGTGATTGTCTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGA-TGCTTGTCTT
* * * * * *
1608766 ATTTTAGGGA-AGAACTTTGATTTCAAGGAAAATAAGGCGAAGAAAAGATTTTCATGCAAAAGAA
65 ATTTAAGGGATA-AACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * * * *
1608830 AATCTTCAATACCACTTATCCTAATGAGGAGAATATGTTTATAGCGCCTAATCACATAATGAATG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* ** * * ** ** * *
1608895 AAGATAATTACCGGAA-CTCGTGTTTGTCTCGTTTGAGGCATTAACTTAGACTCCATAAAATTTG
194 AAGATCATTACTAGAATC-CATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTG
* ** * * * ** * *
1608959 GTGGGAATAAAGATTTTCTTGCCAAACCAAGGCATCAATATCGTGTATCCTTGTGAAAAAACTAT
258 GT-GGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTAT
* * *
1609024 GTTTATGGTGCCTAATCCTAAAAAGAATAGGGATTAGTATGACTATTATTGTTTGTCTTATTTAA
322 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAA
* * * * * *
1609089 CAGACAAACTTTAATTCGATAAAAAAAGGTGGAAAGAAAAGCTTTTCTTGTGACACAAAAGCATC
387 GAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
*
1609154 GATGTCATGTATCCTAATGAAGGG
452 AATGTCATGTATCCTAATGAAGGG
** * ** *
1609178 AAAATGTTTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGACACTTGTCTTC
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * * *
1609243 TTTAAGCGATAAACTTTGATTTTAATTAAAATATGGTAAAGAAAAGATTTTCATGCAAAA-AAAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* * * * * * *
1609307 TCATCAATATCATTTATCCTAAGGAAGAGAATGTTTTTATAATGCCTAATCAAAAAATAAATAAA
131 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
** * * **
1609372 GATTTTTGCTAGAATCAATGTTTGTCTCATTT-AGGGCAC-AAAATAGACTTTACAAAAATTGGT
196 GATCATTACTAGAATCCATGTTTGTCTCATTTGA-GGCACGAACTTAGACTTTACAAAAATTGGT
* ** * * * * * *
1609435 AGTAAAAGTGCCTGTCTTACGAAACCAAACCATTAATATCATGTATTCTAATGAGAAGACTATCT
260 -GGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGT
** * * *
1609500 TTGCGGTGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTATTGTTTGTCTTATTTAAGG
324 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAGA
* * * * **
1609565 GACAAACTTTGATTCGGTCAACAACGATGGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCGG
389 GACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAA
*
1609630 TGTCATGTATCCTAAAGAAGCGG
454 TGTCATGTATCCTAATGAAG-GG
* * * * *
1609653 -ATATGATTTTGGTTT-CAATCTTTTAAAGAATGGTGACTATTATGGGAATCGATGCTTGTCTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * * * *
1609716 TTTAAAGGG-TAAACTTTGATATCAATTAAAATAGGGTAAAGAAAAGATTTCAAAGCAAAAGAAA
66 TTT-AAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* * * * ***
1609780 ATCATCAATATCATTTATCCCAAGGGGGAGAA--TG----T-GT--C----C-CATAATGAGCAA
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
*
1609831 AGATCATTAGTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACACAAAATTGG
195 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACA-AAAATTGG
* * *
1609896 TGGAAAAAATGCCTTCCTTGTGAAACCAAACCATCAATATCATGTATCCTAATGAGAAGACTATG
259 TGGAAAAAA-GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATG
* * *
1609961 TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACT-TTAATGTTTGTCTTATTGCAA
323 TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATT-TAA
** ***
1610025 -AGACAAACTTTGATTCGATCAAAAATAGTGGAAAGAAAAGCTTTTCTTGCGACACTGTAGCATC
387 GAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
* *
1610089 AATGTCA-GCTATCTTAAAGAAGGG
452 AATGTCATG-TATCCTAATGAAGGG
** * * * **
1610113 AAAATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTTACTGTTGTGAGAATCGATGCTTGTCTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * *
1610178 GTGAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAGTTTTCCATGCAAAAGAAAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* * * * *
1610243 TCATCAAAATCATTTATCCTGATGAGGGGAATATGTTTATGGTG-CTAAATCACAAAATGAATGA
131 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCT-AATCACAAAATGAATGA
* * * * * *
1610307 AGATCATTAC-AAAATCCGTGTTTGTCTCGTTTGAGGCATGAACATAGACTTTATAAAAATTGGT
195 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* * * *
1610371 AGGAAAATAGCCTTTCTTGC-AACGCCAAAGCATCAATA-CGATGTATCATAAAGAGAAGACTAT
260 -GGAAAAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATC-ATGTATCCTAATGAGAAGACTAT
* * * *
1610434 GCTTATGGTGCATAATCTTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTTATTTAA
322 GTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAA
* * * *
1610499 GAGACAAACATTGATTCGATCAAAAACAGTGGAATGAAAAGCTTTTCTTGCGACACCAAAGGATC
387 GAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
* * *
1610564 CATGTTATGTA-CCTAATGACGGG
452 AATGTCATGTATCCTAATGAAGGG
* * * * *
1610587 ATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGGGAC-GAATACGAGAATCGATGCTTGTCTT
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTG-TTACGAGAATCGATGCTTGTCTT
* *
1610651 ATTTAGGGGATGAACTTTGATTTTAAG-AAAGATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
65 ATTTAAGGGATAAACTTTGATTTTAAGTAAA-ATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * *
1610715 AATCATCAATATCATTTATCCTAATGTGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATA
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * * *
1610780 AAGATCATTACTAGAACCCATGTTTGTCTCATTTGAAGCACGAACTTAGACTTTGCAAAAATTAG
194 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * *
1610845 TGCGAAAAAAGCCTTTCTTGTGAAACCAAGGCATCAATATCATGTATCCTTATGAGAAGACTATG
259 TG-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATG
*** * *
1610910 TTTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTATTG-TTATCTTATTTAAG
323 TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAG
* * * * * * * ** *
1610974 AGATAATCTTCGATTCAATCAAAAACCGTGAAAAGAAAAGCTTTTCCTATGACACCAGAGCATCA
388 AGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
1611039 ATGTCATGTATCCTAATGAAGGG
453 ATGTCATGTATCCTAATGAAGGG
* * * * * ** * * *
1611062 ACTATATTTTTTGTTCCCAATCTTTTAAAGAATGGTGACTGTTATAAGAATTGATGCTAGTTTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * * *
1611127 TTTAAGGGATAAACTTTGATTTAAATTAAAAAAGGGCAAAGAAAAAATTTCCATGCAGAAA-AAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCA-AAAGAAA
* * *
1611191 ATCATCAATATCATTTACCCTAAGGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGA
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
* * * *
1611256 AGATCATTACTAGAACCCATGTTTGTCTCATTTGAAGCACGAACTTAGACTTTGCAAAAATTAGT
195 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* * *
1611321 GCGAAAAAAGCCTTTCTTGTGAAACCAAGGCATCAATATCATGTATCCTTATGAGAAGACTATGT
260 G-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGT
*** * *
1611386 TTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTATTG-TTATCTTATTTAAGA
324 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAGA
* * * * * * * *
1611450 GATAATCTTTGATTCAATCAAAAACCGTGAAAAGAAAAGCTTTTCCTACGACACCAGAGCATCAA
389 GACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAA
1611515 TGTCATGTATCCTAATGAAGGG
454 TGTCATGTATCCTAATGAAGGG
* * * * * ** * * *
1611537 ACTATGTTTTTTGTTCCCAATCTTTTAAAGAATGGTGACTATTATAAGAATTGATGCTAGTTTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
* * *
1611602 TTTAAGGGATAAACTTTGATTTAAATTAAAAAAGGGCAAAGAAAAGATTTCCATGCAGAAA-AAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCA-AAAGAAA
* * *
1611666 ATCATCAATATCATTTACCCTAAGGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGA
130 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
* *
1611731 AGATCATTACTAGAATCTATGTTTGTCTCATTTGAGGCACGGACTTAGACTTTACAAAAATTGGT
195 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* ** * * ** * * *
1611796 GGTAAAAAGGGTTTTCTTGCGAAGCTAATCCATTAATATCGTGTAAT-CTAATGAGAAGACTATA
260 GG-AAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGT-ATCCTAATGAGAAGACTATG
* *
1611860 TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTATTGTTTGTCCTATTTAAG
323 TTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAG
* * * * * *
1611925 AGACAAATTTTGATTCGATC-AAAACAGGTGCACAGAAAAGCTTTTCCTGCAACACCAAGGCATC
388 AGACAAACTTTGATTCGATCAAAAAC-GGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
** *
1611989 AATAACATGTATCCTAATAAAGGG
452 AATGTCATGTATCCTAATGAAGGG
** * * * * * * *
1612013 AAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAATGGTGATTGCTATGAGAATCAATCCATGT-TT
1 AATGTGTTTTTGGTTTCCAATCTT-TTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTT
* * *
1612076 GATTTAAGGGATAAACTTTGACTTTAATTAAAATAGGGCAAAGAATAGATTTCCATGCAAAAGAA
65 -ATTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * * * *
1612141 AATCATAAATATCATTTATCCTAATGAGAAAAATGTGTTTATAGTGCCTAATCACGAATTGAGTG
129 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * * * *
1612206 AAGATCATTACTGGAACCCATGTTTGT-T-ATGTTCGAGGTACGAACTTGGACTTTTCAAAAATT
194 AAGATCATTACTAGAATCCATGTTTGTCTCAT-TT-GAGGCACGAACTTAGACTTTACAAAAATT
** * * * *
1612269 CTTGGGAAAAAAGCCTTTCTTGCGAAACCAAATCATCAATATGATGTATCTTAAGGAGAAGACTA
257 GGT-GGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTA
* * * *
1612334 TGTTTATGGTGCCTAATGGTGGAAAAGAATGGGGATTAGTATGAGTATTCA-TGTTTGTCTTAAT
321 TGTTTATGGTGCCTAAT-CTTGAAAAGAATGGGGATTAGTATGACTATT-ATTGTTTGTCTTATT
* * * * * *
1612398 TAAGAGGCAAACATTGGTT-GTATC-AAAATGGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAG
384 TAAGAGACAAACTTTGATTCG-ATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAG
* *
1612461 CATCAATGTCATGTATCATAATAAAGGG
448 CATCAATGTCATGTATCCTAATGAAGGG
* ** * * *
1612489 AATGTGTTTTTGGTTT-TAATCTTGAAAAGAATGGAGACTGCTACGAGAATCAATGCTTGTCTTA
1 AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
** * **
1612553 TTTAAGGGACGAACTTTGATTTCAAGTAAAATAGGGCAAAGAAAAGATTTTAATGCAAAAGAAAA
66 TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* * * *
1612618 TCGTCAATATCGTTTATCCTAATGAGGAGAATGTGTTTATGGTGCCTAATCACAAAATGAGTGAA
131 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
* * *
1612683 GATCAAT-CATAGAATCCACGTTTATCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
196 GATCATTAC-TAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* * * * * *
1612747 GGGAAAATGCCTTTCTTGCGAAAGCAAAACATCAATATCGTGTATCCTAATGAAAAGACTATGTT
260 GGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTT
1612812 TATGG
325 TATGG
1612817 CCCCAATCAT
Statistics
Matches: 31073, Mismatches: 5951, Indels: 3290
0.77 0.15 0.08
Matches are distributed among these distances:
457 9 0.00
458 9 0.00
459 113 0.00
460 334 0.01
461 648 0.02
462 704 0.02
463 364 0.01
464 382 0.01
465 132 0.00
466 136 0.00
467 116 0.00
468 165 0.01
469 183 0.01
470 531 0.02
471 1003 0.03
472 2011 0.06
473 3147 0.10
474 6883 0.22
475 6271 0.20
476 4526 0.15
477 1771 0.06
478 780 0.03
479 395 0.01
480 147 0.00
481 253 0.01
482 60 0.00
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.32
Consensus pattern (475 bp):
AATGTGTTTTTGGTTTCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGATGCTTGTCTTA
TTTAAGGGATAAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
GATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTG
GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTTT
ATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCTTATTTAAGAGA
CAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATG
TCATGTATCCTAATGAAGGG
Found at i:1583431 original size:158 final size:159
Alignment explanation
Indices: 1583269--1583938 Score: 424
Period size: 158 Copynumber: 4.2 Consensus size: 159
1583259 CGAAACCAAG
1583269 GCATCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAAT
1 GCATCAATATCATGTATCCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAAT
*
1583333 GT-ATTAGTATGACTATTATTGTTATCTTATTTAAGAGATAATCTTTGA-TTCAATCAAAAACCG
66 GTCATTAGTATGACTATTA-TGTTATCTTATTTAAGAGATAATCTTTGACTTCAATCAAAAACAG
1583396 TGAAAAGAAAAGCTTTTCCTACAACACTAGA
130 TGAAAAGAAAAGCTTTTCCTACAA-ACTAGA
* * * * * * ** *
1583427 GCATCAATGTCATGTAT-CCTAATGA-AGGGACTATGTTTTTTGTTCCCAATCTT-TTAAG-GAA
1 GCATCAATATCATGTATCCCTAATGAGA-AGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAA
* * ** * * * * * * * *
1583488 TGGTGACT-GTTATGAGAATTGATGCTAGTTTTTTTTAAGGGATAAACTTTGATTTAAATTAAAA
65 T-GTCATTAG-TATGACTATT-ATGTTA-TCTTATTTAAGAGATAATCTTTGACTTCAATCAAAA
* * * * ** *
1583552 A-AGGGCAAAGAAAAG-ATTTCCATGCAGAAGAAAA
126 ACAGTGAAAAGAAAAGCTTTTCC-TACA-AACTAGA
** * * * * * ** *
1583586 TTATCAATATCAT-TAT-CCTAATGTGGAGAATGTGTTTATAGTGCCTAATC-ACATAATGAATA
1 GCATCAATATCATGTATCCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGA-AAAGAA-A
* * * * * * * * *
1583648 AAGATCATTACTA-GAACCCA-TAT-TTGTCTCATTTGAAG-CATGAA-CATAGACTT-TAT-AA
64 ATG-TCATTAGTATG-A-CTATTATGTTATCTTATTT-AAGAGAT-AATCTTTGACTTCAATCAA
* ** * * *
1583706 AAATTAGTGCGAA-AAAAGCCTTTT-TTGCGAAACCA-A
124 AAA-CAGTGAAAAGAAAAG-CTTTTCCTAC-AAACTAGA
1583742 GGCATCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAA
1 -GCATCAATATCATGTATCCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAA
*
1583806 TGT-ATTAGTATGACTATTATTGTTATCTTATTTAAGAGATAATCTTTGA-TTCAATCAAAAACC
65 TGTCATTAGTATGACTATTA-TGTTATCTTATTTAAGAGATAATCTTTGACTTCAATCAAAAACA
1583869 GTGAAAAGAAAAGCTTTTCCTACAACACTAGA
129 GTGAAAAGAAAAGCTTTTCCTACAA-ACTAGA
* *
1583901 GCATCAATGTCATGTAT-CCTAATGA-AGGGACTATGTTT
1 GCATCAATATCATGTATCCCTAATGAGA-AGACTATGTTT
1583939 TTTGTTCCCA
Statistics
Matches: 374, Mismatches: 94, Indels: 88
0.67 0.17 0.16
Matches are distributed among these distances:
154 2 0.01
155 9 0.02
156 19 0.05
157 70 0.19
158 185 0.49
159 64 0.17
160 15 0.04
161 9 0.02
162 1 0.00
ACGTcount: A:0.36, C:0.14, G:0.16, T:0.33
Consensus pattern (159 bp):
GCATCAATATCATGTATCCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAAT
GTCATTAGTATGACTATTATGTTATCTTATTTAAGAGATAATCTTTGACTTCAATCAAAAACAGT
GAAAAGAAAAGCTTTTCCTACAAACTAGA
Found at i:1584046 original size:158 final size:159
Alignment explanation
Indices: 1583399--1584046 Score: 370
Period size: 158 Copynumber: 4.1 Consensus size: 159
1583389 AAAACCGTGA
* *
1583399 AAAGAAAAGCTTTTCCTACAACACTAGAGCATCAATGTCATGTATCCTAATGAAGGGACTATGTT
1 AAAGAAAAGCATTTCCTACAA-ACTAGAGCATCAATATCATGTATCCTAATG-AGGGACTATGTT
* * *
1583464 TTTTGTTCCCAATCTTTTAAGGAATGGTGACT-GTTATGAGAATTGATGCTAGTTTTTTTTAAGG
64 TATTGTGCCCAATCTTATAAGGAATGGTGACTAGTTATGAGAATTGATGCTAGTTTTTTTTAAGG
1583528 GATAAACTTTGATTTAAATTAAAAA-AGGGC
129 GATAAACTTTGATTTAAATTAAAAATAGGGC
* ** * ** * * *
1583558 AAAGAAAAG-ATTTCCATGCAGAAGAAAATTATCAATATCAT-TATCCTAATGTGGAGAATGTGT
1 AAAGAAAAGCATTTCC-TACA-AACTAGAGCATCAATATCATGTATCCTAATGAGG-GACTATGT
* * ** * *** *** ** * ** *
1583621 TTATAGTGCCTAATCACATAATGAATAAAGA-TCA-TTACT-AGAACCCATATTTGTCTCATTTG
63 TTATTGTGCCCAATCTTATAAGGAATGGTGACT-AGTTA-TGAGAATTGATGCTAGT-TTTTTTT
* * * * *
1583683 AA-GCATGAACATAGACTTT--A-TAAAAATTAGTGC
125 AAGGGATAAACTTTGA-TTTAAATTAAAAA-TAGGGC
* * ** * * *
1583716 GAA-AAAAGCCTTTTTTGCGAAACCA-AGGCATCAATATCATGTATCCCT-ATGAGAAGACTATG
1 AAAGAAAAGCATTTCCTAC-AAACTAGA-GCATCAATATCATGTAT-CCTAATGAG-GGACTATG
* * * * * ** * * *
1583778 TTTATGGTGCCTAATCTTGAAAAGAAAAT-GT-ATTAG-TATGACTATT-ATTGTTA-TCTTATT
62 TTTATTGTGCCCAATCTT-ATAAG-GAATGGTGACTAGTTATGAGAATTGA-TGCTAGTTTTTTT
* * * * ** * *
1583838 TAAGAGATAATCTTTGA-TTCAATCAAAAACCGTGA
124 TAAGGGATAAACTTTGATTTAAATTAAAAATAGGGC
* *
1583873 AAAGAAAAGCTTTTCCTACAACACTAGAGCATCAATGTCATGTATCCTAATGAAGGGACTATGTT
1 AAAGAAAAGCATTTCCTACAA-ACTAGAGCATCAATATCATGTATCCTAATG-AGGGACTATGTT
* * *
1583938 TTTTGTTCCCAATCTTTTAAGGAATGGTGACT-GTTATGAGAATTGATGCTAGTTTTTTTTAAGG
64 TATTGTGCCCAATCTTATAAGGAATGGTGACTAGTTATGAGAATTGATGCTAGTTTTTTTTAAGG
1584002 GATAAACTTTGATTTAAATTAAAAA-AGGGC
129 GATAAACTTTGATTTAAATTAAAAATAGGGC
1584032 AAAGAAAAG-ATTTCC
1 AAAGAAAAGCATTTCC
1584047 ATGCAGAAAA
Statistics
Matches: 346, Mismatches: 106, Indels: 75
0.66 0.20 0.14
Matches are distributed among these distances:
155 2 0.01
156 14 0.04
157 53 0.15
158 186 0.54
159 77 0.22
160 14 0.04
ACGTcount: A:0.36, C:0.13, G:0.17, T:0.33
Consensus pattern (159 bp):
AAAGAAAAGCATTTCCTACAAACTAGAGCATCAATATCATGTATCCTAATGAGGGACTATGTTTA
TTGTGCCCAATCTTATAAGGAATGGTGACTAGTTATGAGAATTGATGCTAGTTTTTTTTAAGGGA
TAAACTTTGATTTAAATTAAAAATAGGGC
Found at i:1591127 original size:472 final size:472
Alignment explanation
Indices: 1589231--1612816 Score: 9495
Period size: 475 Copynumber: 49.9 Consensus size: 472
1589221 AGGATGAACA
* * * ** *
1589231 TTGATTCTATAAAAAACGATGGAAAGAAAAGC-TTTCTTTGAAACACCAAAGCATCAATGTTATG
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTC-TTGCGACACCAAAGCATCAATGTCATG
* * * * * ** *
1589295 CATTCTAACGAAGAGAATGTGTTTTTAGTTCCCAATCTTGAAAAGAATTGAGGACTATTACGAGA
65 TATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTTTTAAAGAATGGA-GACTATTACGAGA
* * * *
1589360 ATCGATGCTTGTCTTATTTAAGGGATGAACTTTTATTT-TATGAAAAATAGGGCAAAGAAAAGAT
128 ATCGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCAAT-TAAAATAGGGCAAAGAAAAGAT
* * * * * * **
1589424 TTTCATGTAAAAGAAAATCATCAGTATCATTTACCCTATTGA-GAGAATGTGTTTATAATGCCGG
192 TTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTA
* * * *
1589488 ATCACAAAATGAATTAAGATCATTACTGGAATCCTTGTTTGTCTCATTT-AGAGCAT-ACACTTA
257 ATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAG-GCATGA-ACTTA
* * * *
1589551 GACTTTACAAAAATTGCTGGTACAAATGCCTTTCTTGTGAAACCAAACCATCAATATCGTGTATC
320 GACTTTACAAAAATTGGTGGGA-AAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATC
* * *
1589616 ATTATGAGAAGACTATGTTTATGG-GCCTTAATCTTGAAAAGTATAGGGATTAGTATGACTATTA
384 CTTATGAGAAGACTATGTTTATGGTGCC---ATCTTGAAAAGAATGGGGATTAGTATGACTATTA
* * *
1589680 CTGTTTGTCTTATTTGATAGACAAACT
446 ATGTTTGTCTTATTTAAGAGACAAACT
** **
1589707 TTGATTCGATCAAAAACCATGGAAAGAAATTCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * * *
1589772 ATCCTAACGAAGGGAATATG-TTTTGGTTCCTAATCTTTTAAGGAATGGTGACAATTGCGAGAAT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * * * * *
1589836 CGATTCTTCTCTTTTTTAAGGGATATAAACTTTGATTTCAATTAAAATTA-GGTAAAGAAAATAT
130 CGATGCTTGTCTTATTTAAGGGA-A-GAACTTTGATTTCAATTAAAA-TAGGGCAAAGAAAAGAT
* * *
1589900 TTCCATCCAAAAGAAAATCATCAATATCATTTATTCTAATGAGGAGAGAATATGTTTATAGTGCC
192 TTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGA-G-GAGAATATGTTTATAGTGCC
* * * *
1589965 TAATAACAAAATGAATGAAGATCATTGCTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTA
255 TAATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTA
* ** * * * ** ** ** **
1590030 GACTTTACAAAAGTTGGTGTTAAAGAAACCCTTATTGCAAAATGAAAGGGTCAATATAATGTATC
320 GACTTTACAAAAATTGGTGGGAAA-AAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATC
* * * * * *
1590095 CTAATGGGATGACTATGTTTATGGTGCCTAAGCGTGAAAAGAATGGGGATTTGTATGACTATTAA
384 CTTATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAA
1590160 TGTTTGTCTT-TTTAAAGAGACAAACT
447 TGTTTGTCTTATTT-AAGAGACAAACT
* * *
1590186 TTGATT-GAATAAAAAACGGAGGAAAGAAAA-CTTTTCTTGCGACACCAACGCATCAATGTCATG
1 TTGATTCG-ATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* * * *
1590249 TAACCTAATGAAGGGAATGTG-TTTTGGTTCCTAATTTTTTAAAAAATGGAGACTGTTACGAGAA
65 TATCCTAATGAAGGGAATGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTATTACGAGAA
* * * * * * * *
1590313 TCAATTCTTGCCTTGTTTAAAGGATGAACTTTGATTTCAGA-AAAAATAGGGTAAAGAAAAGA-T
129 TCGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCA-ATTAAAATAGGGCAAAGAAAAGATT
* * * *
1590376 TTCTATGAAAAAGAAAATCATCAATATCATTTAACCTAATGAGGAGAAT-T-ATTATAGTGCCGA
193 TTC-ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTA
* * * * * * ** *
1590439 ATCACATAACGTATGAAGATCATT-TTCGGAACCCATGTTTGTCTTATTTGAGGCACAAACTTAT
257 ATCACAAAATGAATGAAGATCATTACT-AGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAG
** *** * * * *
1590503 ACTTTGTAGCGATTGGTGCGAGAAAGCC-TTCTTGTGAAACCAAGGCATCAATATCGTGCATCCT
321 ACTTTACAAAAATTGGTGGGAAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCT
* * *
1590567 AATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTGTGACTATTCATG
386 TATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATG
* * *
1590632 TTTGTCTTATATATGACACAAACT
449 TTTGTCTTATTTAAGAGACAAACT
* * * * * * *
1590656 TTGATTCTATCAAAAATGGTGGAAGGAAAAGCTTTTCTTACGATACCAAAACATCAATGTCAAGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
** *
1590721 ATCCTAATGAA-GGAATGTGTTTTT-GTTCCAATCTTGAAAAGAATGGAGACTATTACGAGAATT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTATTACGAGAATC
* * ** *
1590784 AATGATTGTCGTTTATTTTAA-GGAAGAACTTTGATTTCAAGGAAAATAAGGCAAAGAAAAGATT
131 GATGCTTGTC--TTA-TTTAAGGGAAGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATT
* * *
1590848 TTCATGCAAAAG-AAATCTTCAATATCATTTATCCTAATAAGGAGAATATGTTTATAGCGCCTAA
193 TTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAA
* * *
1590912 TCACATAATGAATGAAGATCATTACTAGAACCCTTGTTTGGCTCATTTGAGGCATGAACTTAGAC
258 TCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
* * * * * * *
1590977 TTTATAGAATTTGGTGGGAATAAAGCTTTTCTTATGAAACCAAGGCATCAATGTCGTGTATCCTT
323 TTTACAAAAATTGGTGGGAA-AAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTT
* * * * * *
1591042 GTGAAAAAACTATGTTTTATGGTGCC-TC-CGAAAAAGAATGGGGATTAGTATGACTCTTATTGT
387 ATGAGAAGACTATG-TTTATGGTGCCATCTTG-AAAAGAATGGGGATTAGTATGACTATTAATGT
*
1591105 TTGTCTTATTTAAAAGACAAACT
450 TTGTCTTATTTAAGAGACAAACT
* *
1591128 TTAATTCGATC-AAAACGATGGAAAGAAAAGC-TTTCTTGCGACACCAAAGCATCAATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
** * * *
1591191 ATCCTAATGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTAAAAAATGGTGGACTATTATGAGAA
66 ATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTTTTAAAGAATGG-AGACTATTACGAGAA
* * *** *
1591256 TCGATGCTTGTCTTCTTTAA--GAATAAACTTTGATTTTTTTTTTTAAAATAGGGCAAAGAAAAT
129 TCGATGCTTGTCTTATTTAAGGGAA-GAACTTTGA---TTTCAATTAAAATAGGGCAAAGAAAAG
* * * * *
1591319 ATTTCCAAGCAAAAGAAAATCTTTAATATCA-TTATCC---TCAGGAG--T-TG---A-A-TG--
190 ATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCC
* * * * * *
1591370 T-GTCACAAAATGAATGAACATCATTACTAGAATCCATGTTTGTCTCCTTTAAGGCACGAACTTA
255 TAATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTA
* * * * * *
1591434 GACTTTACAAACATTGGTGGTAGAAATGCCTTTC-TGTGAAACCAAACCATCAATATCATGTCTC
320 GACTTTACAAAAATTGGTGGGA-AAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATC
* * * * * * * *
1591498 CTAATAAGAAAACT-TGTTTATCGTGGCTAATCTTGAAAAGAATGAGGATTTGTATGACTAGTAA
384 CTTATGAGAAGACTATGTTTATGGT-GC-CATCTTGAAAAGAATGGGGATTAGTATGACTATTAA
* * *
1591562 TGTTTATGTTGTTTAAGAGACCAAACT
447 TGTTTGTCTTATTTAAGAGA-CAAACT
* * *
1591589 TCGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAGTGT-AGCG
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA-TG
* * * * * * * *
1591653 TATCCTAATAAAGGAAATGTATTTTTGGTTTGCAATCTTTTAAAGAGTGGAGGCTGTTACAAGAA
65 TATCCTAATGAAGGGAATGTGTTTTTGG-TTCCAATCTTTTAAAGAATGGAGACTATTACGAGAA
* * ** *
1591718 TTGATTCTTGTCTTATTTAAGGGGTGAACTTTGATTTTGAA--AAAATAGGGCAAAGAAAAGATT
129 TCGATGCTTGTCTTATTTAAGGGAAGAACTTTGA-TTTCAATTAAAATAGGGCAAAGAAAAGATT
* * * **
1591781 TCCACAG-AAAAGAAAATCATCAATATCATTTATCCTAATAAGGAGAACGTG-TTATAGTGCCTA
193 TTCA-TGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTA
* * * * *
1591844 GTCACAAAATGAATGAAGATCATTACTGGAACCCAT-CTTATCTCATTAGAGGCATGAACTTAGA
257 ATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGA
* * * * * * * * *
1591908 CTTTGCAGAATTTAGTGTGAAAAAAACCTTTCTTGTGAAACCAAGGCAACAATATCATGTA-CCA
322 CTTTACAAAAATTGGTG-GGAAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCC-
* *
1591972 TTATGAGAATACTATGTTTATGG-GTCCTAATCTTGAAAAGTATGGGGATTAGTATGACTATTAA
385 TTATGAGAAGACTATGTTTATGGTG-CC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAA
*
1592036 TGTTTGTCTTATTTGAGAGA-AAACT
447 TGTTTGTCTTATTTAAGAGACAAACT
* * * * *
1592061 TTGATTTGATCATAAA-GCATGGGAAAGAAAAGCTTTTCTTGTGACACCAAAGAATCAATGTCAT
1 TTGATTCGATCAAAAACG-GT-GGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* ** * *
1592125 GTATCCTAATGAAGGGAATATGTTTTTGGTTCCTAATCTTTTAGTGAATGGTGACTATTACAAGA
64 GTATCCTAATGAAGGGAATGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTATTACGAGA
* * * *
1592190 ATCGATTCTTCTCTTATTTAAGGGATA-AACTTTGATTTTAATTAAAATAGGGTAAAGAAAAGAT
128 ATCGATGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGAT
* * *
1592254 TTCCATGCAAAA-AAAATTTATCAATATCATTTATCCTAATGCGGAGAATATGTTTATAGTGCCT
192 TTTCATGCAAAAGAAAA-TCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCT
* * ** * *
1592318 AATCACAAAATGAATGAAGGTTATTACTAGAGTCCATGTTT-CCTCATTTGAGGCATGAATTTAG
256 AATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAG
* **
1592382 ACTTTACAAAAATTGGCGGGAAAAAAG-CTCTTCTTGCAAAACCAAAGCATCAATAT-GATGTAT
321 ACTTTACAAAAATTGGTGGG-AAAAAGCCT-TTCTTGTGAAACCAAAGCATCAATATCG-TGTAT
* * * * * * *
1592445 CCTAATGAGAAGACTATGTTTATGGTGCCTAACCCTAAAAAAAATGGGGATTTGTATGGCTATTA
383 CCTTATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTA
*
1592510 ATGTTTGTCGTT-TTTAGGAGACAAACT
446 ATGTTTGTC-TTATTTAAGAGACAAACT
**
1592537 TTGATTC-ATCAAAAGTGGTGGAAAGAAAA-CTTTTCTTGCGACACCAAAGCATCAATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* *
1592600 ATCCTAATGAAGGGCATGTG-TTTTGGTTCCTAATCTTTTAAAGAATGGAGACTATTACAAGAAT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * * * ** * *
1592664 CAATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAAATAGGGTAAAGAGAAGATTT
130 CGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCAA-TTAAAATAGGGCAAAGAAAAGATTT
* * * *
1592729 ACATGCAAAA-AAAATCATCAATATCATTTATCCTAATGAGAAGAAT-CGTTTATAGTGACTAAT
194 TCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAAT
* * * ** * * * * ** *
1592792 GACATAATGAGTGAAGATC-TTTGTCGGAAACCATATTTGTATCATTTGAGGCACAAACTTATAC
259 CACAAAATGAATGAAGATCATTACT-AGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
* * * * * * * * *
1592856 TTTATAAAAAGTGGTGCAGAAAAAGCCTTTCTTGCGAAACCAAGGAATCAATATCATGTATTCTA
323 TTTACAAAAATTGGTG-GGAAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTT
** * * * *
1592921 ACAAGAAGACTATGTTTATGGTGCCTAATCTTAAAAAGAATAGGGATTAGTATTACTATTGAT-T
387 ATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGT
*
1592985 TTGTCTTATATAAGACG-CAAACT
450 TTGTCTTATTTAAGA-GACAAACT
** * * * *
1593008 TTGATTATATCAAAATA--GTGGAAGGAAAAGCTTTTCTTGTGACA-CAAAACATCAATGTCAAG
1 TTGATTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* * ** *
1593070 TATCCTAATGAAGGGAATGTGTTTTTCGTTCCAATATTGAAAAGAATGGAGACTATTACCAG-AT
65 TATCCTAATGAAGGGAATGTGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * * * ** * *
1593134 AG-TGATTGTCTAATTTTAGGGAAGAACTTTGATTTCAAGGAAAATAAGGCGAAGAAAAGATTTT
130 CGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATTTT
* * * *
1593198 CATGCAAAAAGAAAATCTTC-ATACCACTTATCCTAATGAGGAGAATATGTTTATAGCGCCTAAT
195 CATGC-AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAAT
* * ** * * * *
1593262 CACATAATGAATGAAGATAATTACCGGAACTCGTGTTTGTCTC-GTTGAGGCATTAACTTAGAC-
259 CACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGACT
* * * ** *
1593325 -TCCATAAATTTGGTGGGAATAAAG-ATGTTCTTGCCAAACCAAGGCATC-ATATCGTGTATCCT
324 TTACA-AAAATTGGTGGGAA-AAAGCCT-TTCTTGTGAAACCAAAGCATCAATATCGTGTATCCT
* * * * *
1593387 TGTGA-AAAACTATGTTTATGGTGGCCTAATCCTAAAAAGAATAGGGATTAGT-TGACTATT-AT
386 TATGAGAAGACTATGTTTATGGT-GCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAAT
*
1593449 -TTTGTCTTATTTAACAGACAAACT
448 GTTTGTCTTATTTAAGAGACAAACT
* * * * * *
1593473 TTAATTCGATAAAAAAAGGTGGAAAGAAAAGCTTTTCTTGTGACACAAAAGCATCGATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
** * *
1593538 ATCCTAATGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTACGAGAAT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTATTACGAGAAT
** * * *
1593603 CGACACTTGTCTTCTTTAA--GATA-AACTTTGA-TT-AATTAAAATATGGTAAAGAAAAGATTT
130 CGATGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATTT
* * * * *
1593663 TCATGC-AAA-AAAATCATC---ATCATTTATCCTAAGGAAGAGAATGTTTTTATAATGCCTAAT
194 TCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAAT
* * * ** * * * * **
1593723 CAAAAAATAAATAAAGATTTTTGCTAGAATCAATGTTTGTCTCATTT-AGGGCA-CAAAATAGAC
259 CACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGA-GGCATGAACTTAGAC
* * * * ** * * * * *
1593786 -TTACAAAAATTGGTAGTAAAAGTGCCTGTCTTACGAAACCAAACCATTAATATCATGTATTCTA
323 TTTACAAAAATTGGTGGGAAAA-AGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTT
* ** * * *
1593850 ATGAGAAGACTATCTTTGCGGTGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTATTGT
387 ATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGT
*
1593915 TTGTCTTATTTAAGGGACAAACT
450 TTGTCTTATTTAAGAGACAAACT
* * * * **
1593938 TTGATTCGGTCAACAACGATGGAAAGAAAAGCTTTT-TTGTGACACCAAAGCATCGGTGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * * *
1594002 ATCCTAAAGAAGCGG-ATATGATTTTGGTTTCAATCTTTTAAAGAATGGTGACTATTA-GGGAAT
66 ATCCTAATGAAG-GGAATGTGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * *
1594065 CGATGCTTGTCTTATTTAAAGGGTA-AACTTTGATATCAATTAAAATAGGGTAAAGAAAAAGA-T
130 CGATGCTTGTCTTATTT-AAGGGAAGAACTTTGATTTCAATTAAAATAGGGCAAAG-AAAAGATT
* * *
1594128 TTCAAAGCAAAAGAAAATCATCATCTTTCATTT-TCCCTAA-GAGG-GAGA-ATG----T-GT--
193 TTC-ATGCAAAAGAAAATCATCA-ATATCATTTAT-CCTAATGAGGAGA-ATATGTTTATAGTGC
* *** * *
1594182 C----C-CATAATGAGCAAAGATCATTAGTAGAATCCC-TGTTTGTCTCA-TTGAGGCACGGAAC
254 CTAATCACAAAATGAATGAAGATCATTACTAGAA-CCCATGTTTGTCTCATTTGAGGCA-TGAAC
* * * * *
1594240 TTAGACTTTACAAAAATTGGTGGAAAAAAATGCCTTCCCTGTGAAACCAAACCATCAATATCATG
317 TTAGACTTTACAAAAATTGGTGG-GAAAAA-GCCTTTCTTGTGAAACCAAAGCATCAATATCGTG
* * * * *
1594305 TATCCTAATGAGAAGATTGTGCTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACT-
380 TATCCTTATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTA
*
1594369 TTAATGTTTGTCTTATTGCAA-AGACAAACT
443 TTAATGTTTGTCTTATT-TAAGAGACAAACT
* *
1594399 TTGATTCGATCAAAATA--GTGGAAAGAAAAGCTTTTCTTGCGAC-CTAGTAGCATCAATGTCA-
1 TTGATTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCTTGCGACACCA-AAGCATCAATGTCAT
* ** * * ** * **
1594460 GCTATCCTAAAGAAGGGAAAATGTTTTTGGTTCCCATCTTTT-AAGAATAGTTACTGTTGTGAGA
64 G-TATCCTAATGAAGGGAATGTGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTATTACGAGA
* * * *
1594524 ATCGATACTTGTCTTAGTGAAGGGATA-AACCTTTGATTTTAATTAAAATAGGGCAAAGAAAA-A
128 ATCGATGCTTGTCTTATTTAAGGGA-AGAA-CTTTGATTTCAATTAAAATAGGGCAAAGAAAAGA
* * * *
1594587 GTTTTCCATGCAAAAGAAAAAATCATCAAAATCATTTATCCTGATGAGGGGAATATGTTTATGGT
191 -TTTT-CATGCAAAAG--AAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGT
* * * *
1594652 G-CTAAATCAC-AAATGAATGAAGATCATTAC-AAAATCCGTGTTTGTC-CGTTTGAGGCATGAA
252 GCCT-AATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAA
* * * * * *
1594713 CATAGACTTTATAAAAATT-GTAGGAAAATAG-CTTTCTTG-CAACGCCAAAGCCTCAATA-CGA
316 CTTAGACTTTACAAAAATTGGTGGGAAAA-AGCCTTTCTTGTGAA-ACCAAAGCATCAATATCG-
* * * * *
1594774 TGTAT-CATAAGAGAAGACTATGCTTATGGTGCATAATCTTGAAAAGAATGGGGATTTGTATGGA
378 TGTATCCTTATGAGAAGACTATGTTTATGGTGC--CATCTTGAAAAGAATGGGGATTAGTAT-GA
*
1594838 CTA-TAACTG-TTGTCTTATTTAAGAGACAAACA
440 CTATTAA-TGTTTGTCTTATTTAAGAGACAAACT
* * * * *
1594870 TTGATTCGATCAAAAAAGTTGGAATG-AAAGCTTTTCTTGCGACA-CAAAGCATCCATGTTATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * * *
1594933 -TACCTAATGACGGGATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGGGACGAATACGAGAA
66 AT-CCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTATTACGAGAA
* * *
1594997 TCGATGCTTGTC-TATTTAGGGGATGAACTTTGATTTTAGA--AAAATAGGGCAAAGAAAAGATT
129 TCGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCA-ATTAAAATAGGGCAAAGAAAAGATT
* * * * *
1595059 TCCATGCATAAGAAAATTATCAATATCA-TTATCCTAATGTGGAGAATGTGTTTATAGTGCCTAA
193 TTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAA
* * * * *
1595123 TCACATAATGAATAAAGATCATTACTAGAACCCATATTTGTCTCATTTGAAGCATGAACATAGAC
258 TCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
* * * * * * * *
1595188 TTTATAAAAATTAGTGCGAAAAAAAGCCTTTTTTGCGAAACCAAGGCATCAATATCATGTATCCC
323 TTTACAAAAATTGGTG-G-GAAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCT
*** * *
1595253 TATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTATTG
386 TATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATG
* * *
1595318 TTTATCTTATTTAAGAGATAATCT
449 TTTGTCTTATTTAAGAGACAAACT
* * * * * * * *
1595342 TTGATTCAATCAAAAACCGTGAAAAGAAAAGCTTTTCCTACAACACTAGAGCATCAATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * * *
1595407 ATCCTAATGAAGGGACTATGT-TTTTTTGTTCCCATCTTTTAAGGAATGGTGACTGTTATGAGAA
66 ATCCTAATGAAGGGA--ATGTGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTATTACGAGAA
* * * * * *
1595471 TTGATGCTAGTTTTTTTTAAGGGATA-AACTTTGATTTAAATTAAAAAAGGGCAAAGAAAAGATT
129 TCGATGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATT
* * * *
1595535 TCCATGCAGAAA-AAAAACATCAATATCATTTACCCTAAGGAAGGAGAATATGTTTATAGTGCCT
193 TTCATGCA-AAAGAAAATCATCAATATCATTTATCCTAATG-AGGAGAATATGTTTATAGTGCCT
* * * *
1595599 AATCACAAAATGAATGAAGATCATTACTAGAATCTATGTTTGTC-CAATTTGAGGCACGGACTTA
256 AATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTC-ATTTGAGGCATGAACTTA
* ** * * * ** * *
1595663 GACTTTACAAAAATTGGTGGTAAAAAGGGTTTTCTTCTTGCGAAGCTAATCCATTAATATCGAGT
320 GACTTTACAAAAATTGGTGGGAAAAA--G-CCT-TTCTTGTGAAACCAAAGCATCAATATCGTGT
* * *
1595728 AAT-CTAATGAGAAGACTATATTTATGGTGCCTAATCTTGAAAAGAATGGGGGATTTGTATGACT
381 -ATCCTTATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAAT-GGGGATTAGTATGACT
* * * *
1595792 ATTATTGTTTGTCCTATTTAAAAGACAAATT
442 ATTAATGTTTGTCTTATTTAAGAGACAAACT
* * * * * **
1595823 TTGATTCGATC-AAAACAGGTGCACAGAACAGCTTTTCTTGCAACACCAAGGCATCAATAACATG
1 TTGATTCGATCAAAAAC-GGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* ** * * ** *
1595887 TATCCTAATAAAGGGAAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAATGGTGATTGCTATGAGA
65 TATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTT-TTAAAGAATGGAGACTATTACGAGA
* * * * *
1595951 ATCAATCCATGT-TTGATTTAAGGGATA-AACTTTGACTTTTAATTAAAATAGGGCAAAGAATAG
128 ATCGATGCTTGTCTT-ATTTAAGGGA-AGAACTTTGA-TTTCAATTAAAATAGGGCAAAGAAAAG
* * * * **
1596014 ATTTCCATGCAAAAGAAAATCATAAATATCATTTATTCTAATGAGAAGAAGGTGTTTATAGTGCC
190 ATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCC
* * ** * * *
1596079 TAATCACGAAATGAATGAAGATCATTACTGGAACCCATGTTTGTCTTGTTCGAGGTACGAACTTA
255 TAATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTA
* ** * *
1596144 GACTTTTCAAAAATTCTTGGGAAAAAAGCCTTTCTTGCGAAACCAAATCATCAATAT-GATGTAT
320 GACTTTACAAAAATTGGTGGG-AAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCG-TGTAT
* ** * *
1596208 -CTTAAGGAGAAGACTATGTTTATGGTGCCTAATGGTGAAAATGAACGGGGATTAGTATGAGTAT
383 CCTT-ATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAA-GAATGGGGATTAGTATGACTAT
* * *
1596272 TCATGTTTGTCTTAATTAAGAGGCAAACT
444 TAATGTTTGTCTTATTTAAGAGACAAACT
* * * * * *
1596301 TTGGTTCTATCAAAAATGGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAGCATTAATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * ** * *
1596366 ATCATAATAAAGGGAATGTGTGTTTTGGTTCTCAATCTTGAAAAAGAATGGAGACTGTTATGAGA
66 ATCCTAATGAAGGGAATGTGT-TTTTGGTTC-CAATCTT-TTAAAGAATGGAGACTATTACGAGA
* * *
1596431 ATCAATGCTTGTCTTATTTAAGGGATGAACTTTGA-TTCAAGTAAAATAGGGCAAAGAAAAGATT
128 ATCGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATT
* ** * *
1596495 TTAATGCAAAAGAAAATTGTCAATATCGTTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA
193 TTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAA
* * * * *
1596560 TCACAAAAATGAGTGAAGATCACT-CATA-AATCCACGTTTATCTCATTTGAGGCATGAACTTAG
258 TCAC-AAAATGAATGAAGATCATTAC-TAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAG
* * * * * *
1596623 AATTTAAAAAAAATTGGTGGGAAAATGCCTTT-TTGCGAAAGCAAAACATCAATATCGTGTATCC
321 ACTTT-ACAAAAATTGGTGGGAAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCC
* ** * * * * ** * *
1596687 TAATGA-AAGACTTATGTTTTATGGCCCCAATCATGAAAA-ATTGGAGATTATTACAACAATCCA
385 TTATGAGAAGAC-TATG-TTTATGGTGCC-ATCTTGAAAAGAATGGGGATTAGTATGACTAT-TA
* * * *
1596750 A-ATTCGTGTTATTTGAAG-GACGAACT
446 ATGTTTGTCTTATTT-AAGAGACAAACT
* * * * * * * * * *
1596776 TTGATTCTAATCGAAAATGATGAAAAGAAAAGGTTCTTTTATG-G-CACCAAAGCCTTAATGTCT
1 TTGATTC-GATCAAAAACGGTGGAAAGAAAAGCTT-TTCT-TGCGACACCAAAGCATCAATGTCA
* * * * *** * ** * * *
1596839 TGTCTCCTAAAGATGGTAAACACGTTTTTGCTTCCAATC-TCGAAATGAATGAAGACAATTACAA
63 TGTATCCTAATGAAGG-GAATGTGTTTTTGGTTCCAATCTTTTAAA-GAATGGAGACTATTACGA
* * * * ** * * ** *
1596903 GAATCTAT-ATTGGTGTCATTTGGGGGATGAACTTTGATTTTAAGGAAAAT-GGGTCAAAGAACA
126 GAATCGATGCTT-GTCTTATTTAAGGGAAGAACTTTGATTTCAATTAAAATAGGG-CAAAGAAAA
* * * ** * * * * ** * * * * *
1596966 -CTTTTCTTG-AGACATCAAAGCAACAATATCGTGTATTGTAGTG-GGAAAACATATTTGTAGTG
189 GATTTTCATGCA-AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTG
** ** * ** * * * * *
1597028 CCTAATCGTTAGCA-G-ATGGAGATGGTTA-TGACAACCCATGGTGGTCGCCTTTGAAGG-ATGA
253 CCTAATC-ACAAAATGAATGAAGATCATTACT-AGAACCCATGTTTGTCTCATTTG-AGGCATGA
* ** * * * *
1597089 ACATT-GA-TTCTATAAAAAACGGTGGAAAGAAAAG-CTTT-TTTTGAAACACCCACGCATCAAT
315 AC-TTAGACTT-TACAAAAATTGGTGG-GA-AAAAGCCTTTCTTGTG-AA-ACCAAAGCATCAAT
* ** * * * * * * * * * * *
1597150 GTTATGCATCCTAACGA-AGTGAATGTGTTTTTAGTTCCCAATCTTGAAAAGAATGGAGACTAGT
374 ATCGTGTATCCTTATGAGA-AGACTATGTTTAT-GGTGCC-ATCTTGAAAAGAATGGGGATTAGT
* ** * * * **
1597214 ACGAGAATCAATGCTTGTCTTATTTAAGGGATGAACT
436 ATGACTATTAATGTTTGTCTTATTTAAGAGACAAACT
* ** * * * * * * ** * * *
1597251 TTTATTTTATGAAAAATAGG-GCAAAGAAAAG-ATTTCAATGC-AAAGAAAATCATCAGTAATCA
1 TTGATTCGATCAAAAA-CGGTGGAAAGAAAAGCTTTTC-TTGCGACACCAAAGCATCAAT-GTCA
* * * * * ** **
1597313 TTTACCCTATTGAAGAGAATGTGTTTTT--AT--AATGCTGGATCACAAATGAATTAAGA-TCAT
63 TGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCAAT-CT---T-TTAAA-GAATGGAGACT-AT
* ** * * * * *
1597373 TATTG-GAATCCTTGTTTGTCTCATTT-AGAGCATA-AACTTAGACTTT-ACA--AAAATTGTTG
121 TA-CGAGAATCGATGCTTGTCTTATTTAAG-GGA-AGAACTTTGA-TTTCA-ATTAAAATAG--G
* * *** * ** ** * * * * * *
1597432 G--TA-CAAATCCTTTCTTGTGAAACCAAA-CATCAATATCGTGTATCATTATGAGAAGACTATG
179 GCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATG
* ** * * * ** *
1597493 TTTAT-GGGCCTTAATCTTGAAAA-GTAT-AGGGATTAGTATGACTATTA-CC--GTTTGTCTTA
244 TTTATAGTGCC-TAATC-ACAAAATGAATGA-AGATCA-T-T-ACTAGAACCCATGTTTGTCTCA
* * * * *** ** * * *
1597552 TTTGATAGCA--AACTTTGA-TTCGATCAAAACCA-AGGAAAGAAATTGCTTTTCTTGCGACACC
303 TTTGA-GGCATGAACTTAGACTT-TA-CAAAA--ATTGGTGGGAAAAAGCCTTTCTTGTGAAACC
* * * * * * * * ** *
1597613 CAAGCATCAATGTCATGTATCCTAACGA-AGGGAATATGTTT-TGGTACCTAAGCTCTTTTAAGG
363 AAAGCATCAATATCGTGTATCCTTATGAGA-AGACTATGTTTATGGTGCC--A--TCTTGAAAAG
* ** * * ** ** * * *
1597676 AATGGTGACAATTACGAGAATCGAT-TCTTCTCTTATTT-AGGGAATAAACT
423 AATGGGGATTAGTATGACTATTAATGT-TTGTCTTATTTAAGAG-ACAAACT
** * * ** * * * * * ** * *
1597726 TTGATTTTAATTAAAATAAGGT--AAA-AAAATATTTCCATCCAAAAGAAAATCATCAATATCAT
1 TTGA-TTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* * * * * * *** * * *
1597788 TTATCCTAATG-AGAAGAATATGTTTATAGTGCCTAATC-ACAAAATGAATGAAGA-TCATTGCT
64 GTATCCTAATGAAG-GGAATGTGTTTTTGGTTCC-AATCTTTTAAA-GAATGGAGACT-ATTACG
* * * * * * * * * * * *
1597850 AGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTT-ACA--AAAGTTGGTGGAAA-AGA
125 AGAATCGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCA-ATTAAAATAGG-GCAAAGAAA
* ** * * ** ** * * * *
1597911 TGCCTTCCTTGTGAAACCAAACCATCAATATCATGTATCCTAATGA-GAAAATTATGTTTATGGT
188 AGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAA-TATGTTTATAGT
** ** * ** * *
1597975 GCCTAATCTTGAAAA-GAATGGGGAT--TT-GTATG-ACTTTAATG-TTGTCTTA-TTGCAAAGA
252 GCCTAATC-ACAAAATGAATGAAGATCATTACTA-GAAC--CCATGTTTGTCTCATTTG---AGG
* * ** ** * * * * *
1598033 CA--AACTTTGA-TTCGATCAAAAA-CAGTGAAAAAAAAAGCTTTTCTTGCGACACTATAGCATC
310 CATGAACTTAGACTT-TA-CAAAAATTGGTG--GGAAAAAGCCTTTCTTGTGAAACCAAAGCATC
* *** * ** * * *** ** *
1598094 AATGTCAACTATCC-TA-AAGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTTAC
371 AATATCGTGTATCCTTATGAGAA--GACTATGTTTATGG-TGCC-ATCTTGAAAAGAATGGGGAT
* ** ** * * * * * *
1598157 T-GTTGTGAGAATCGAGGCTTGTCTTAATGAAGGGATAAACT
432 TAG-TATGACTATTAATGTTTGTCTTATTTAAGAGACAAACT
** * * * * ** * **
1598198 TTGATTTTAATTAAAATA-GG-GCAAAGAAAAG-TTTTCTATGCAAAAGAAAATCATCAAAATCA
1 TTGA-TTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCT-TGCGACACCAAAGCATCAATGTCA
* * * * * *** *
1598260 TTTATCCTGATGAGGGGAATGTGTTTATGGTGCCAAATC-ACAAAATGAATGAAGA-TCATTAC-
63 TGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC-AATCTTTTAAA-GAATGGAGACT-ATTACG
* * * * * * * * * * *
1598322 AAAATCCG-TGTTTGTCTCATTTGAGGCATGAACATAGACTTT-ACA--AAAAT-TGG-TAGGAA
125 AGAAT-CGATGCTTGTCTTATTTAAGGGAAGAACTTTGA-TTTCA-ATTAAAATAGGGCAAAGAA
* * ** * * * * * * * * * * *
1598381 AAGAGCCTTTCTTGCAATGGCAAAGCGTC-ATATGATGTATCGTAAAGAGAAGACTATGCTTATG
187 AAGA--TTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATA
* ** * *** *
1598445 GTGCATAATC-CTGAAAA-GAATGGGGAT--TT-GTATGACTATTAATGTTTGTCTTATTTAAGA
250 GTGCCTAATCAC--AAAATGAATGAAGATCATTACTA-GA--ACCCATGTTTGTCTCATTT--GA
* * * ** * * * * *
1598505 GACA--AACACT-GA-TTCAATCAAAAA-CAGTGGAATGAAAAGCTTTTCTTGCGACACCAAAGG
308 GGCATGAAC-TTAGACTT-TA-CAAAAATTGGTGGGA--AAAAGCCTTTCTTGTGAAACCAAAGC
* * ** * * * * * * ** *
1598565 ATCCATGTTATGTAT-CTAATGACG-GGATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGGG
368 ATCAATATCGTGTATCCTTATGA-GAAGACTATGTTTATGG-TGCC-ATCTTGAAAAGAATGGGG
** * * ** * * * * **
1598628 ACGAATACGAGAATCAATGCTTGTCTTATTTAGGGGATGAACT
430 ATTAGTATGACTATTAATGTTTGTCTTATTTAAGAGACAAACT
** ** * * * * * * ** ** *
1598671 TTGATTTTAAGAAAAATAGG-GCAAAGAAAAGATTTCCATGC-ATAAGAAAATTATCAATATCAT
1 TTGATTCGATCAAAAA-CGGTGGAAAGAAAAGCTTTTCTTGCGA-CACCAAAGCATCAATGTCAT
* * * * *** * ** *
1598734 -TATCCTAATG-TGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATAAAGA-TCATTACTA
64 GTATCCTAATGAAGG-GAATGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACT-ATTACGA
* * ** * * * * * * * *
1598796 GAACCCATATTTGTCTCATTTGAA-GCATGAACATAGACTTT--ATAAAAATTAGTGCGAA-AAA
126 GAATCGATGCTTGTCTTATTT-AAGGGAAGAACTTTGA-TTTCAATTAAAA-TAGGGCAAAGAAA
* * ** ** * * * *
1598857 AGCCTTTT--TGCGAAACCAAGGCATCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGG
188 AG-ATTTTCATGCAAAAGAAAATCATCAATATCATTTAT-CCTAATGAGGAGAATATGTTTATAG
** * * * *
1598919 TGCCTAATCTTGAAAA-GAA--AATG-T-ATTAGTATG-A-CTAT-TATTGTTATCTTATTTAAG
251 TGCCTAATC-ACAAAATGAATGAA-GATCATTACTA-GAACCCATGT-TTG---TCTCATTTGAG
* * ** ** * * ** * *
1598976 AG-AT-AATCTTTGA-TTCAATCAAAAA-CCGTGAAAAGAAAAGCTTTTCCT-ACAACACTAGAG
309 -GCATGAA-CTTAGACTT-TA-CAAAAATTGGTG-GGA-AAAAGCCTTTCTTGTGAA-ACCAAAG
* * * * * * * ** * *
1599036 CATCAATGTCATGTATCCTAATGA-AGGGACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGT
367 CATCAATATCGTGTATCCTTATGAGA-AGACTATG-TTTATGGTGCC-ATCTTGAAAAGAATGGG
* ** * * * * * *
1599100 GACT-GTTATGAGAATTGATGCTAGT-TTTTTTAAGGGATAAACT
429 GATTAG-TATGACTATTAATGTTTGTCTTATTTAAGAGACAAACT
** * * * * * * ** ** *
1599143 TTGATTTAATTAAAAAAGG-GCAAAGAAAAGATTTCCATGCAGA-AGAAAATTATCAATATCAT-
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGC-GACACCAAAGCATCAATGTCATG
* * * * *** * ** *
1599205 TATCCTAATG-TGGAGAATGTGTTTATAGTGCCTAATCACATAATGAATAAAGA-TCATTACTAG
65 TATCCTAATGAAGG-GAATGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACT-ATTACGAG
* * ** * * * * * * * *
1599268 AACCCATATTTGTCTCATTTGAA-GCATGAACATAGACTTT--ATAAAAATTAGTGCGAA-AAAA
127 AATCGATGCTTGTCTTATTT-AAGGGAAGAACTTTGA-TTTCAATTAAAA-TAGGGCAAAGAAAA
* * * ** ** * * * *
1599329 GCCTTTT-TTGCGAAACCAAGGCATCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGGT
189 G-ATTTTCATGCAAAAGAAAATCATCAATATCATTTAT-CCTAATGAGGAGAATATGTTTATAGT
** * * * *
1599392 GCCTAATCTTGAAAA-GAA--AATG-T-ATTAGTATG-A-CTAT-TATTGTTATCTTATTTAAGA
252 GCCTAATC-ACAAAATGAATGAA-GATCATTACTA-GAACCCATGT-TTG---TCTCATTTGAG-
* *** ** * * ** * *
1599449 G-AT-AATCTTTGA--TT-CAATCAAAACCGTGAAAAGAAAAGCTTTTCCT-ACAACACTAGAGC
309 GCATGAA-CTTAGACTTTACAA--AAATTGGTG-GGA-AAAAGCCTTTCTTGTGAA-ACCAAAGC
* * * * * * * ** * *
1599508 ATCAATGTCATGTATCCTAATGA-AGGGACTATGTTTTTTGTTCCCAATCTTTTAAGGAATGGTG
368 ATCAATATCGTGTATCCTTATGAGA-AGACTATG-TTTATGGTGCC-ATCTTGAAAAGAATGGGG
* ** * * * * * * *
1599572 ACT-GTTATGAGAATTGATGCTAGTTTTTTTTAAGGGATAAACT
430 ATTAG-TATGACTATTAATGTTTGTCTTATTTAAGAGACAAACT
** * * * * * * ** * *
1599615 TTGATTTAAATTAAAAAAGG-GCAAAGAAAAGATTTCCATGCAGA-AAAAAAACATCAATATCAT
1 TTGA-TTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGC-GACACCAAAGCATCAATGTCAT
* * * * * * *** * *
1599678 TTACCCTAA-GAAGGAGAATATGTTTATAGTGCCTAATC-ACAAAATGAATGAAGA-TCATTACT
64 GTATCCTAATGAAGG-GAATGTGTTTTTGGTTCC-AATCTTTTAAA-GAATGGAGACT-ATTACG
* * ** * * * * * * * *
1599740 AGAATCTATGTTTGTCCAATTTGAGGCACGGACTTAGACTTTACAA--AAATTGGTGGTAAA-AA
125 AGAATCGATGCTTGTCTTATTTAAGGGAAGAACTTTGA-TTT-CAATTAAAATAG-GGCAAAGAA
** * * * ** * * * * * * *
1599802 GGGTTTTTCTTGC-GAAGCTAATCCATTAATATCGAGTAAT-CTAATGAGAAGACTATATTTATG
187 AAGATTTTCATGCAAAAGAAAAT-CATCAATATC-ATTTATCCTAATGAGGAGAATATGTTTATA
** ** * ** *
1599865 GTGCCTAATCTTGAAAA-GAATGGGGAT--TT-GTATG-ACTATTATTGTTTGTC-CTATTTAAA
250 GTGCCTAATC-ACAAAATGAATGAAGATCATTACTA-GAAC--CCA-TGTTTGTCTC-ATTT--G
* * * * * * *
1599924 AGACA--AATTTTGA-TTCGATCAAAACA--GGT-GCACAGAACAGCTTTTCTTG-CAACACCAA
307 AGGCATGAACTTAGACTT-TA-CAAAA-ATTGGTGGGA-A-AA-AGCCTTTCTTGTGAA-ACCAA
* * * * ** * * *
1599982 GGCATCAATAACATGTATCCTAAT-A-AAGGGAAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAA
365 AGCATCAATATCGTGTATCCTTATGAGAA--GACTATGTTTATGG-TGCC-ATCTTG-AAAAGAA
* ** * *** * *
1600044 TGGTGATT-GCTATGAGAATCAATCCATGT-TTGATTTAAGGGATAAACT
425 TGGGGATTAG-TATGACTATTAATGTTTGTCTT-ATTTAAGAGACAAACT
** * * * * * * * * ** * * *
1600092 TTGACTTTAATTAAAATA-GG-GCAAAGAATAGATTTCCATGCAAAAGAAAATCATAAATATCAT
1 TTGA-TTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* * * * * * * *** *
1600155 TTATTCTAATG-AGAAGAAGGTGTTTATAGTGCCTAATC-ACGAAATGAATGAAGA-TCATTACT
64 GTATCCTAATGAAG-GGAATGTGTTTTTGGTTCC-AATCTTTTAAA-GAATGGAGACT-ATTAC-
* * * * ** * * * * **
1600217 G-GAACCCATGTTTGTCTTGTTCGAGGTACGAACTTAGACTTTTCAA--AAATTCTTGG--AA-A
124 GAGAATCGATGCTTGTCTTATTTAAGGGAAGAACTTTGA--TTTCAATTAAAAT-AGGGCAAAGA
** * * ** * * * * * * *
1600276 AAAGCCTTTCTTGCGAAACCAAATCATCAATATGATGTATCTTAAGGAGAAGACTATGTTTATGG
186 AAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAG
*** * ** * * * ** * *
1600341 TGCCTAATGGTGAAAATGAACGGGGATTAGTA-TGAGTATTCATGTTTGTCTTAATTAAGAGGCA
251 TGCCTAAT-CACAAAATGAATGAAGATCATTACT-AGAACCCATGTTTGTC-TCATT-TGAGGCA
* * * ** * * *
1600405 --AACTTTG-GTTCTATCAAAAA-TGGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAGCATTAA
312 TGAACTTAGACTT-TA-CAAAAATTGGTGGGAA--AAAGCCTTTCTTGTGAAACCAAAGCATCAA
* * * * * * * * * *
1600466 TGTCATGTATCATAAT-A-AAGGGAATGTGTTTTTGGTTCTCAATCTTGAAAAGAATGGAGACT-
373 TATCGTGTATCCTTATGAGAA--GACTATGTTTATGGTGC-C-ATCTTGAAAAGAATGGGGATTA
** * * * **
1600528 GTTATGAGAATCAATGCTTGTCTTATTTAAGGGATGAACT
434 G-TATGACTATTAATGTTTGTCTTATTTAAGAGACAAACT
* * * ** * * ** *** * *
1600568 TTGATTTCAAGT-AAAATA-GG-GCAAAGAAAAGATTTTAATGCAAAAGAAAATTGTCAATATCG
1 TTGA-TTCGA-TCAAAA-ACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
* * * * *** * * *
1600630 TTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAGTGAAGA-TCACT-C
63 TGTATCCTAATGAAGG-GAATGTGTTTTTGGTTCC-AATCTTTTAAA-GAATGGAGACT-ATTAC
* * * * * * * * * * * * *
1600691 ATAGAATCCACGTTTATCTCATTTGAGGCATGAACTTAGAATTT-AA-AAAAATTGGTG---GGA
124 -GAGAATCGATGCTTGTCTTATTTAAGGGAAGAACTTTG-ATTTCAATTAAAATAGG-GCAAAGA
* * * * ** *
1600751 AAATGCCTTTT--TGCGAAAGCAAAA-CATCAATATCGTGTATCCTAATGAAAAGACTATGTTTA
186 AAA-G-ATTTTCATGCAAAAG-AAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTA
* * * * * * * * ** * * *
1600813 T-G-GCCCCAATCATGAAAA--ATTGGAGATTATTACAACAATCCAAATTCGTGTTATTTGAAGG
248 TAGTG-CCTAATCA-CAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTG-AGG
* * * * ** * * * ** *
1600874 -ACGAACTTTGA-TTCTATCGAAAA-TGATGAAAAGAAAAG-GTTCTTTTATGGCACCAAAGCCT
310 CATGAACTTAGACTT-TA-CAAAAATTGGTG-GGA-AAAAGCCTT-TCTTGTGAAACCAAAGCAT
* * * * * * * * * * * * * **
1600935 TAATGTCTTGTCTCCTAAAGATGGTA-AC-ACGTTTTTGCTTCCCAATCTCGAAATGAATGAAGA
370 CAATATCGTGTATCCTTATGA--GAAGACTATGTTTATG-GTGCC-ATCTTGAAAAGAATGGGGA
** * ** ** * * * * ** * **
1600998 CAATTACAAGAATCT-ATATTGGTGTCATTTGGGGGATGAACT
431 TTAGTATGACTAT-TAATGTTTGTCTTATTTAAGAGACAAACT
** *** * * * * * * * *
1601040 TTGATTTTAAGGAAAATGG-GTCAAAGAACA-CTTTTCTTGAGACATCAAAGCAACAATATCGTG
1 TTGATTCGATCAAAAACGGTG-GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
** * ** * * * * * * * *
1601103 TATTGTAGTG--GGGAAAACATATTTGTAGTGCCTAATC-GTTAGCAG-ATGGAGA-TGGTTATG
65 TATCCTAATGAAGGG--AATGTGTTTTTGGTTCC-AATCTTTTA-AAGAATGGAGACT-ATTACG
* * * * * *** * * * * *
1601163 ACAACCCATGGTGGTCGCCTTTGAA-GGATGAACATTGA-TTCTA-TAAAAAACGGTGGAAAGAA
125 AGAATCGATGCTTGTCTTATTT-AAGGGAAGAACTTTGATTTCAATTAAAATA-GG-GCAAAGAA
* ** ** ** * * ** * * * * *
1601225 AAGCTTTTTTTG-AAACACCAACGCATCAATGTTATGCATCCTAACGAAGTGAATGTGTTTTTAG
187 AAGATTTTCATGCAAA-AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAG
* * ** * * * * * * * *
1601289 TTCCCAATCTTGAAAA-GAATGGAGA-CTATTACGAGAATCAATGCTTGTCTTATTTAAGGGATG
251 TGCCTAATC-ACAAAATGAATGAAGATC-ATTACTAGAACCCATGTTTGTCTCATTTGAGGCATG
** * * * ** * * ** ** * *
1601352 AACTTTTATTTTATGAAAAATAGG-GCAAAGAAAAG-ATTTCAATGCAAAAGAAAATCATCAGTA
314 AACTTAGACTTTA-CAAAAATTGGTG-GGA-AAAAGCCTTTC-TTGTGAAACCAAAGCATCAATA
* * * * * ** * ** * *** * *
1601415 TCATTTA-CCCTATTGA-AGAGAATGTGTTTATAATGCTGGATC-ACAAATGAATTAAGATCATT
375 TCGTGTATCCTTA-TGAGA-AGACTATGTTTATGGTGC--CATCTTGAAAAGAATGGGGATTAGT
*** * *
1601477 ATTGGA--ATCCTTGTTTGTCTCATTT-AGAGCATAAACT
436 A-T-GACTATTAATGTTTGTCTTATTTAAGAG-ACAAACT
* * * * * * * * * * * * *
1601514 TAGACTT-TA-CAAAAATTGTTGG-TACAAATGCCTTTCTTGTGAAACCAAACCATCAATATCGT
1 TTGA-TTCGATCAAAAA-CGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* * * * * * * ** * * * *
1601576 GTATCATTATG-AGAAGACTATGTTTATGG-GCCTTAATCTTGAAAAGTATAGG-GATTAGTATG
64 GTATCCTAATGAAG-GGAATGTGTTTTTGGTTCC--AATCTTTTAAAGAAT-GGAGACTATTACG
** * * * * ** * * * *
1601638 ACTAT-TACCGTTTGTCTTATTTGATAGACA-AACTTTGA-TTCGATCAAAAACCAAGG-AAAGA
125 AGAATCGA-TGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAAT-TAAAA-TAGGGCAAAGA
* * * * * ** * * * * * *
1601699 AATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAACGAAGG-GAATATGTTTTTG
186 AAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATG-AGGAGAATATGTTTATA
* **** * ** * * * * * * *
1601763 GTACCTAATCTTTTAAGGAATGGTGA-CAATTACGAGAATCGAT-TCTTCTCTTATTTTAGGGAT
250 GTGCCTAATCACAAAATGAATGAAGATC-ATTACTAGAACCCATGT-TTGTCTCATTTGAGGCAT
* * * * ** *** * *** ** *
1601826 AAACTTTGATTTTA-ATTAAAATAAGGT-AAAAAAAATATTTCCATCCAAAAGAAAATCATCAAT
313 GAACTTAGACTTTACA--AAAAT-TGGTGGGAAAAAGCCTTT-CTTGTGAAACCAAAGCATCAAT
* * * * * ** ** *
1601889 ATCATTTATCCTAATGAGAAGAATATGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCA-T
374 ATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAA-GAATGGGGATTAGT
** * * *
1601952 -TG-CTAGAATCCATGTTTGTCTCATTTGAG-GCACGAACT
436 ATGACT---ATTAATGTTTGTCTTATTTAAGAG-ACAAACT
* * ** * * * * * * * *
1601990 TAGACTT-TA-CAAAAGTTGGTGGAAA-AGATGCCTTCCTTGTGAAACCAAACCATCAATATCAT
1 TTGA-TTCGATCAAAA-ACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
** * * * ** * * *
1602052 GTATCCTAATG-AGAAAATTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGA-TTTGTATGA
64 GTATCCTAATGAAGGGAA-TGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTAT-TACGA
** ** * * * * * * * *
1602115 -CTTTAATGTTTGTCTTATTGCAA-AGACA-AACTTTGA-TTCGATCAAAAACAGTG-AAAAAAA
126 GAATCGATGCTTGTCTTATT-TAAGGGA-AGAACTTTGATTTCAAT-TAAAATAGGGCAAAGAAA
* * * * ** * * * ** * * * *
1602175 AGCTTTTCTTGCGACACTATAGCATCAATGTCAACTATCCTAAAGAAGG-GAAAATGTTTTTGGT
188 AGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATG-AGGAGAATATGTTTATAGT
* * **** * ** * * * * * * *
1602239 TCCCAATCTTTTTAA-GAATG--G-TTACTGTTGTGAGAATCGAGGCTTGTCTTA-ATGAAGGGA
252 GCCTAATC-ACAAAATGAATGAAGATCA-T-TACT-AGAACCCATGTTTGTCTCATTTG-AGGCA
* * * * ** * ** ** *
1602299 TAAACTTTGATTTTA-ATTAAAATAGG-GCAAAGAAAAG-TTTTCTATGCAAAAGAAAATCATCA
312 TGAACTTAGACTTTACA--AAAATTGGTG-GGA-AAAAGCCTTTCT-TGTGAAACCAAAGCATCA
* * * * ** * * ** ** *
1602361 AAATCATTTATCCTGATGAGGGGAATGTGTTTATGGTGCCAAATC-ACAAAATGAATGAAGATCA
372 ATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAA-GAATGGGGATTA
* * ** *** * * *
1602425 TTA-CAAAATCCGTGTTTGTCTCATTT--GAGGCATGAACA
434 GTATGACTATTAATGTTTGTCTTATTTAAGAGACA--AACT
* * * * * * *** * * *
1602463 TAGACTT-TA-CAAAAATTGGTAGG-AA-AAGAGCCTTTCTTGCAATGGCAAAGCGTCAATATGA
1 TTGA-TTCGATCAAAAA-CGGT-GGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
* * * * * * * * * * ** * * *
1602524 TGTATCGTAAAG-AGAAGACTATGCTTATGGTGCATAATCCTGAAAAGAATGGGGA-TTTGTATG
63 TGTATCCTAATGAAG-GGAATGTGTTTTTGGTTC-CAATCTTTTAAAGAATGGAGACTAT-TACG
** ** * * ** * * *
1602587 ACTATTAATGTTTGTCTTATTTAAGAGACA-AACACTGA-TTCAATCAAAAACAGTGG-AATGAA
125 AGAATCGATGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAAT-TAAAATAG-GGCAAAGAA
* * * * ** ** * * * * * * * *
1602649 AAGCTTTTCTTGCGACACCAAAGGATCCATGTTATGTAT-CTAATGACGG-GATTGTGTTTTTGG
187 AAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGA-GGAGAATATGTTTATAG
* * *** ** * * * * * * *
1602712 TTCCCAATCTTTTAAAT-AATGGGGA-CGAATACGAGAATCAATGCTTGTCTTATTT-AGGGGAT
251 TGCCTAATC-ACAAAATGAATGAAGATC-ATTACTAGAACCCATGTTTGTCTCATTTGA-GGCAT
* * * * ** * * * ** **
1602774 GAACTTTGATTTTAAGAAAAATAGG-GCAAAGAAAAG-ATTTCCATG-CATAAGAAAATTATCAA
313 GAACTTAGACTTT-ACAAAAATTGGTG-GGA-AAAAGCCTTT-CTTGTGA-AACCAAAGCATCAA
* * * * * * * ** * *** *
1602836 TATCAT-TATCCTAATGTGGAGAATGTGTTTATAGTGCCTAATC-ACATAATGAATAAAGATCA-
373 TATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC--ATCTTGA-AAAGAATGGGGATTAG
** * * * *
1602898 T-T-ACTAGAACCCATATTTGTCTCATTTGA-AG-CATGAACA
435 TATGACTATTA---ATGTTTGTCTTATTTAAGAGACA--AACT
* * ** * * *
1602937 TAGACTT-TAT-AAAAATTAGTGCG-AA-AAAAGCCTTTT-TTGCGAAACCAAGGCATCAATATC
1 TTGA-TTCGATCAAAAA-CGGTG-GAAAGAAAAG-CTTTTCTTGCGACACCAAAGCATCAATGTC
* * * * * ** * * *
1602997 ATGTATCCCT-ATG-AGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAAT-G-TATTAGT
62 ATGTAT-CCTAATGAAG-GGAATGTGTTTTTGGTTCC-AATCTTTTAAAG--AATGGAGACTATT
* ** * * * * * * *
1603058 ATGACTAT-TATTG-TTATCTTATTTAAGAGATA-ATCTTTGA-TTCAATCAAAA-ACCGTGAAA
122 ACGAGAATCGA-TGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAATTAAAATA--GGGCAA
* * * * ** * * * * *
1603118 AGAAAAGCTTTTCCTACAACACTAGAGCATCAATGTCATGTATCCTAATGAAGG-GACTATGTTT
183 AGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATG-AGGAGAATATGTTT
* * * * **** * ** * *** * * ** *
1603182 TTTGTTCCCAATCTTTTAAGGAATGGTGA-CTGTTA-TGAGAATTGATGCTAGT-TTTTTTAAGG
247 ATAGTGCCTAATCACAAAATGAATGAAGATC-ATTACT-AGAACCCATGTTTGTCTCATTTGAGG
* * * * ** ** * * * * *
1603244 GATAAACTTTGA-TTTAAATTAAAAAAGG-GCAAAGAAAAG-ATTTCCATGCAGAAA-AAAATCA
310 CATGAACTTAGACTTTACA--AAAATTGGTG-GGA-AAAAGCCTTT-CTTG-TGAAACCAAAGCA
* * * * * * * ** **
1603305 TCAATATCATTTA-CCCTAAGAAGGAGAATATGTTTATAGTGCCTAATC-ACAAAATGAATGAAG
369 TCAATATCGTGTATCCTTATG-AGAAGACTATGTTTATGGTGCC--ATCTTGAAAA-GAATGGGG
* * * * **
1603368 ATCATTACTAGA--ATCT-ATGTTTGTCTAATTTGAG-GCACGGACT
430 ATTAGTA-T-GACTAT-TAATGTTTGTCTTATTTAAGAG-ACAAACT
* * * * * * * ** * *
1603411 TAGACTT-TA-CAAAAATTGGTGGTAA-AAAGGGTTTTCTTGCGA-AGCTAATCCATTAATATCG
1 TTGA-TTCGATCAAAAA-CGGTGGAAAGAAAAGCTTTTCTTGCGACA-CCAAAGCATCAATGTC-
* * * * * * ** * *
1603472 A-GTAAT-CTAATG-AGAAGACTATATTTATGGTGCCTAATCTTGAAAAGAATGGGGA-TTTGTA
62 ATGT-ATCCTAATGAAG-GGAATGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTAT-TA
* ** * * * ** * * * *
1603533 TGACTAT-TATTGTTTGTCCTATTTAAAAGACA-AATTTTGA-TT-AGATCAAAACAGGTGCACA
123 CGAGAATCGA-TGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCA-ATTAAAATAGG-GCAAA
* * * ** ** * * * * *
1603594 GAAAAGCTTTTCTTGCAACACCAAGGCATCAATAACATGTATCCTAATAAAGG-GAAAATGTTTT
184 GAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAAT-GAGGAGAATATGTTTA
* * * **** ** *** * * *** * * * *
1603658 TGGTTCCCAATTTGTTAAA-GAATGGTGATTGCTA-TAAGAATCAATCCATGTTTGATTTAAGGG
248 TAGTGCCTAA-TCACAAAATGAATGAAGATCATTACT-AGAACCCATGTTTGTCTCATTTGAGGC
* * * * ** * ** ** ** * *
1603721 ATAAACTTTGATTTTA-ATTAAAATAGG-GCAAATAATAG-ATTTCCAAGCAAAAGAAAATCATA
311 ATGAACTTAGACTTTACA--AAAATTGGTGGGAA-AA-AGCCTTT-CTTGTGAAACCAAAGCATC
* * * * * * ** * ** *
1603783 AATATCATTTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCACGAAATGAATGAAGATCA
371 AATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTA
* *** * ** *
1603848 TTACTGGA--ACCCATGTTTGTCTTGTTCGAG-GTACGAACT
434 GTA-T-GACTATTAATGTTTGTCTTATTTAAGAG-ACAAACT
* * * * * * * * *
1603887 TAGACTT--TTCAAAAATTC-TTGGGAA-AAAAGCCTTTCTTGCGAAACCAAATCATCAATATGA
1 TTGA-TTCGATCAAAAA--CGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
* * * * * * * * * *** * * * *
1603948 TGTATCTTAA-GGAGAAGACTATGTTTATGGTGACTAATGGTGGAAAAGAATGGGGATTAGTATG
63 TGTATCCTAATGAAG-GGAATGTGTTTTTGGT-TCCAAT-CTTTTAAAGAATGGAGACTATTACG
* * * * * * * * * *
1604012 AGTATTC-ATGTTTGTCTTAATTAAGAGGCA-AACTCTG-GTTCTA-TCAAATATGGTGGAAAGG
125 AG-AATCGATGCTTGTCTTATTTAAG-GGAAGAACTTTGATTTCAATTAAAATA-GG-GCAAAGA
* * * * ** * * * * * * * *
1604073 AAAGTTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCATAATAAAGG-GAATGTGTTTTTG
186 AAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAAT-GAGGAGAATATGTTTATA
* * ** * * * * * * *
1604137 GTTCTTAATCTTGAAAA-GAATG--GATACTGTTACGAGAATCAAT-TCTTGTCTTATTTAAGGG
250 GTGCCTAATC-ACAAAATGAATGAAGAT-C-ATTACTAGAACCCATGT-TTGTCTCATTTGAGGC
* * ** ** ** ** ** *
1604198 ATGAACTTTGA-TTT-CAAGTAAAATAGG-GCAAACAAAAGATTTTAATGCAAAAGAAAATCATC
311 ATGAACTTAGACTTTAC-A--AAAATTGGTG-GGA-AAAAGCCTTTCTTGTGAAACCAAAGCATC
* * * * * * ** * ** *
1604260 AATATCGTTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAGTGAAGATC
371 AATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAA-GAATGGGGATT
* *** * * * * *
1604324 ATTCATAGA--ACCCACGTTTATCTCATTTGAG-GCACGAACT
433 AGT-AT-GACTATTAATGTTTGTCTTATTTAAGAG-ACAAACT
* * * * * * ** * * *
1604364 TAGACTT-TA-CAAAAATTGGTGG---GAAAATGCCTTTCTTGCAAAAGAAAAACATCAATATCG
1 TTGA-TTCGATCAAAAA-CGGTGGAAAGAAAA-GCTTTTCTTGCGACACCAAAGCATCAATGTCA
** * * * ** * * * * *
1604424 TGTATCCTAATGAAAAGACTATGTTTATGGCCCCAATC-ATGAAA-AATTGGAGATTATTACAAC
63 TGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCAATCTTTTAAAGAA-TGGAGACTATTACGAG
* ** * * * * * *
1604487 AATCCA-AATTCGTGTTATTTGAA-GGACGAACTTTGA-TTCTATCGAAAAT-GATGAAAAGAAA
127 AATCGATGCTT-GTCTTATTT-AAGGGAAGAACTTTGATTTCAAT-TAAAATAG-GGCAAAGAAA
* * ** * * * * * * * * *
1604548 AGGTTCTTTTATGGC---ACCAAAGCCTTAATGTC-TTGTCTCCTAAAGATGG-TAACACGTTT-
188 A-GAT-TTTCAT-GCAAAAGAAAATCATCAATATCATT-TATCCTAATGA-GGAGAATATGTTTA
* * * * * ** * * * * *
1604607 TTGCTTCCCAATCTCGAAATGAATGAAGAAAATTACAAGAATCTATATTGGTCTCATTTTTG-GG
248 TAG-TGCCTAATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCA--TTTGAGG
* * * * ** * * * * *
1604671 GATGAACTTTGATTTTA-AGGAAAATGGGTCAAAGAAAAA-CTTTTCTTGAGACATCAAAGCAAC
310 CATGAACTTAGACTTTACA--AAAATTGGT--GGGAAAAAGCCTTTCTTGTGAAACCAAAGCATC
* * * * * * ** *
1604734 AATATCTTGTAT--TGTAGTGGGGAGAAC-ATATTTGTAGTGCCTAATCGTT-AGCAG-ATGGAG
371 AATATCGTGTATCCT-TA-TGAGAAG-ACTATGTTTATGGTGCC--ATC-TTGAAAAGAATGGGG
* * *** * *** ** *
1604794 A-TGGTTATGACAACCCATGGTTGTCGCCTTTGAAG-GATGAACA
430 ATTAG-TATGACTATTAATGTTTGTCTTATTT-AAGAGACAAACT
* * * ** *
1604837 TTGATTCTATAAAAAACGATGGAAAGAAAAGC-TTTCTTTGAAACACCAAAGCATCAATGTTATG
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTC-TTGCGACACCAAAGCATCAATGTCATG
* * * * * ** *
1604901 CATTCTAACGAAGAGAATGTGTTTTTAGTTCCCAATCTTGAAAAGAATTGAGACTATTACGAGAA
65 TATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTATTACGAGAA
* * * *
1604966 TCGATGCTTGTCTTATTTAAGGGATGAACTTTTATTT-TATGAAAAATAGGGCAAAGAAAAGATT
129 TCGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCAAT-TAAAATAGGGCAAAGAAAAGATT
* * * * * * **
1605030 TTCATGTAAAAGAAAATCATCAGTATCATTTACCCTATTGA-GAGAATGTGTTTATAATGCCGGA
193 TTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAA
* * * *
1605094 TCACAAAATGAATTAAGATCATTACTGGAATCCTTGTTTGTCTCATTT-AGAGCAT-ACACTTAG
258 TCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAG-GCATGA-ACTTAG
* * * * *
1605157 ACTTTACAAAAATTGCTGGTACAAATGCCTTTCTTGTGAAACCAAACCATCAATATCGTGTATCA
321 ACTTTACAAAAATTGGTGGGA-AAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCC
* * *
1605222 TTATGAGAAGACTATGTTTATGG-GCCTTAATCTTGAAAAGTATAGGGATTAGTATGACTATTAC
385 TTATGAGAAGACTATGTTTATGGTGCC---ATCTTGAAAAGAATGGGGATTAGTATGACTATTAA
* *
1605286 TGTTTGTCTTATTTGATAGACAAACT
447 TGTTTGTCTTATTTAAGAGACAAACT
** **
1605312 TTGATTCGATCAAAAACCATGGAAAGAAATTCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * * *
1605377 ATCCTAACGAAGGGAATATGTTTTTGGTTCCTAATCTTTTAAGGAATGGTGACAATTGCGAGAAT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * * * *
1605442 CGATTCTTCTCTTTTTTAAGGGATA-AACTTTGATTTCAATTAAAATTA-GGTAAAGAAAATATT
130 CGATGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAATTAAAA-TAGGGCAAAGAAAAGATT
* * *
1605505 TCCATCCAAAAGAAAATCATCAATATCATTTATTCTAATGAGGAGAATATGTTTATAGTGCCTAA
193 TTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAA
* * * *
1605570 TAACAAAATGAATGAAGATCATTGCTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGAC
258 TCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
* ** * * * ** ** ** ** *
1605635 TTTACAAAAGTTGGTGTTAAAGAAACCCTTATTGCAAAATGAAAGGGTCAATATAATGTATCCTA
323 TTTACAAAAATTGGTGGGAAA-AAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTT
* * * * *
1605700 ATGGGATGACTATGTTTATGGTGCCTAAGCGTGAAAAGAATGGGGATTTGTATGACTATTAATGT
387 ATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGT
1605765 TTGTCTT-TTTAAAGAGACAAACT
450 TTGTCTTATTT-AAGAGACAAACT
* * *
1605788 TTGATT-GAATAAAAAACGGAGGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATGTCATG
1 TTGATTCG-ATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* * * *
1605852 TAACCTAATGAAGGGAATGTGTTTTTGGTTCCTAATTTTTTAAAAAATGGAGACTGTTACGAGAA
65 TATCCTAATGAAGGGAATGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTATTACGAGAA
* * * * * * *
1605917 TCAATTCTTGCCTTGTTTAAAGGATGAACTTTGATTTTCAGA--AAAATAGGGTAAAGAAAAGA-
129 TCGATGCTTGTCTTATTTAAGGGAAGAACTTTGA-TTTCA-ATTAAAATAGGGCAAAGAAAAGAT
* * * *
1605979 TTTCTATGAAAAAGAAAATCATCAATATCATTTAACCTAATGAGGAGAAT-TATTTATAGTGCCG
192 TTTC-ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCT
* * * * * * **
1606043 AATCACATAACGTATGAAGATCATT-TTCGGAACCCATGTTTGTCTTATTTGAGGCACAAACTTA
256 AATCACAAAATGAATGAAGATCATTACT-AGAACCCATGTTTGTCTCATTTGAGGCATGAACTTA
* ** *** * * *
1606107 TACTTTGTAGCGATTGGTGCGAGAAAAGCCTTTCTTGTGAAACCAAGGCATCAATATCGTGCATC
320 GACTTTACAAAAATTGGTGGGA-AAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATC
* * *
1606172 CTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTGTGACTATTCA
384 CTTATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAA
* * *
1606237 TGTTTGTCTTATATATGACACAAACT
447 TGTTTGTCTTATTTAAGAGACAAACT
* * * * * * *
1606263 TTGATTCTATCAAAAATGGTGGAAGGAAAAGCTTTTCTTACGATACCAAAACATCAATGTCAAGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* ** *
1606328 ATCCTAATGAAGGGAATGTGTTTTTTGTTCCAATCTTGAAAAGAATGGAGACTATTACGAGAATT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTATTACGAGAATC
* * * ** *
1606393 AATGATTGTCGTATTTTAA-GGAAGAACTTTGATTTCAAGGAAAATAAGGCAAAGAAAAGATTTT
131 GATGCTTGTCTTA-TTTAAGGGAAGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATTTT
* * *
1606457 CATGCAAAAGAAAATCTTCAATATCATTTATCCTAATAAGGAGAATATGTTTATAGCGCCTAATC
195 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATC
* * *
1606522 ACATAATGAATGAAGATCATTACTAGAACCCTTGTTTGGCTCATTTGAGGCATGAACTTAGACTT
260 ACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGACTT
* * * * * * * *
1606587 TATAGAATTTGGTGGGAATAAAGCTTTTCTTATGAAACCAAGGCATCAATGTCGTGTATCCTTGT
325 TACAAAAATTGGTGGGAA-AAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTTAT
* * * * *
1606652 GAAAAAACTATGTTTATGGTGCC-TC-CGAAAAAGAATGGGGATTAGTATGACTCTTATTGTTTG
389 GAGAAGACTATGTTTATGGTGCCATCTTG-AAAAGAATGGGGATTAGTATGACTATTAATGTTTG
*
1606715 TCTTATTTAAAAGACAAACT
453 TCTTATTTAAGAGACAAACT
* * *
1606735 TTAATTCGATCAAAAACGATGGAAAGAAAAGCATTTCTTGCGACACCAAAGCATCAATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
** * * *
1606800 ATCCTAATGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTAAAAAATGGTGACTATTATGAGAAT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * *** *
1606865 CGATGCTTGTCTTCTTTAA-GGAATAAACTTTGATTTTTTTTTTAAAATAGGGCAAAGAAAATAT
130 CGATGCTTGTCTTATTTAAGGGAA-GAACTTTGA--TTTCAATTAAAATAGGGCAAAGAAAAGAT
* * * * * *
1606929 TTCCAAGCAAAAGAAAATCTTTAATATCATTTATCC---TCAGGAG----T-TTGA-A-TG--T-
192 TTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTA
* * * * * *
1606981 GTCACAAAATGAATGAACATCATTACTAGAATCCATGTTTGTCTCCTTTAAGGCACGAACTTAGA
257 ATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGA
* * * *
1607046 CTTTACAAAAATTGGTGGTAGAAATGCCTTTCTTGTGAAACCAAACCATCAATATCATGTATCCT
322 CTTTACAAAAATTGGTGGGA-AAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCT
* * * * * * * *
1607111 AATAAGAAAACT-TGTTTATCGTGGCTAATCTTGAAAAGAATGAGGATTTGTATGACTAGTAATG
386 TATGAGAAGACTATGTTTATGGT-GC-CATCTTGAAAAGAATGGGGATTAGTATGACTATTAATG
* * *
1607175 TTTATGTTGTTTAAGAGACAAACT
449 TTTGTCTTATTTAAGAGACAAACT
* * **
1607199 TCGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAGTGTCGCGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * * * * *
1607264 ATCCTAATAAAGGAAATGTATTTTTGGTTTGCAATCTTTTAAAGAGTGGAGGCTGTTACAAGAAT
66 ATCCTAATGAAGGGAATGTGTTTTTGG-TTCCAATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * ** * ** *
1607329 TGATTCTTGTCTTATTTAAGGGGTGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTC
130 CGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATTTT
* * ** *
1607394 CACAG-AAAAGAAAATCATCAATATCATTTATCCTAATAAGGAGAACGTGTTTATAGTGCCTAGT
195 CA-TGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAAT
* * * *
1607458 CACAAAATGAATGAAGATCATTACTGGAACCCAT-CTTATCTCATTAGAGGCATGAACTTAGACT
259 CACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGACT
* * * * * * * * *
1607522 TTGCAGAATTTAGTGTGAAAAAAACCTTTCTTGTGAAACCAAGGCAACAATATCATGTA-CCATT
324 TTACAAAAATTGGTG-GGAAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCC-TT
* *
1607586 ATGAGAATACTATGTTTATGG-GTCCTAATCTTGAAAAGTATGGGGATTAGTATGACTATTAATG
387 ATGAGAAGACTATGTTTATGGTG-CC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATG
*
1607650 TTTGTCTTATTTGAGAGA-AAACT
449 TTTGTCTTATTTAAGAGACAAACT
* * * * *
1607673 TTGATTTGATCATAAA-GCATGGAAAGAAAAGCTTTTCTTGTGACACCAAAGAATCAATGTCATG
1 TTGATTCGATCAAAAACG-GTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* ** * *
1607737 TATCCTAATGAAGGGAATATGTTTTTGGTTCCTAATCTTTTAGTGAATGGTGACTATTACAAGAA
65 TATCCTAATGAAGGGAATGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTATTACGAGAA
* * * *
1607802 TCGATTCTTCTCTTATTTAAGGGATA-AACTTTGATTTTAATTAAAATAGGGTAAAGAAAAGATT
129 TCGATGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATT
* * *
1607866 TCCATGCAAAA-AAAATTTATCAATATCATTTATCCTAATGCGGAGAATATGTTTATAGTGCCTA
193 TTCATGCAAAAGAAAA-TCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTA
* * ** * *
1607930 ATCACAAAATGAATGAAGGTTATTACTAGAGTCCATGTTTGCCTCATTTGAGGCATGAATTTAGA
257 ATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGA
* **
1607995 CTTTACAAAAATTGGCGGGAAAAAAG-CTCTTCTTGCAAAACCAAAGCATCAATAT-GATGTATC
322 CTTTACAAAAATTGGTGGG-AAAAAGCCT-TTCTTGTGAAACCAAAGCATCAATATCG-TGTATC
* * * * * * *
1608058 CTAATGAGAAGACTATGTTTATGGTGCCTAACCCTAAAAAAAATGGGGATTTGTATGGCTATTAA
384 CTTATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAA
*
1608123 TGTTTGTCGTT-TTTAGGAGACAAACT
447 TGTTTGTC-TTATTTAAGAGACAAACT
* ** *
1608149 TTGATTCAATCAAAAGTGGTGGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* *
1608214 ATCCTAATGAAGGGCATGTGTTTTTGGTTCCTAATCTTTTAAAGAATGGAGACTATTACAAGAAT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTTCC-AATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * * * ** * *
1608279 CAATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAAATAGGGTAAAGAGAAGATTT
130 CGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCAA-TTAAAATAGGGCAAAGAAAAGATTT
* * * * *
1608344 ACATGCAAAAAAAAATCATCAATATCATTTATCCTAATGAGAAGAAT-CGTTTATAGTGACTAAT
194 TCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAAT
* * * ** * * * * ** *
1608408 GACATAATGAGTGAAGATC-TTTGTCGGAAACCATATTTGTATCATTTGAGGCACAAACTTATAC
259 CACAAAATGAATGAAGATCATTACT-AGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
* * * * * * * * *
1608472 TTTATAAAAAGTGGTGCAGAAAAAGCCTTTCTTGCGAAACCAAGGAATCAATATCATGTATTCTA
323 TTTACAAAAATTGGTG-GGAAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTT
** * * * * *
1608537 ACAAGAAGACTATGTTTATGGTGCCTAATCTTAAAAAGAATAGGGATTAGTATTACTATTGATTT
387 ATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGT
*
1608602 TTGTCTTATATAAGACG-CAAACT
450 TTGTCTTATTTAAGA-GACAAACT
** ** * * * *
1608625 TTGATTATATCAAAAATAGTGGAAGGAAAAGCTTTTCTTGTGACA-CAAAACATCAATGTCAAGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * ** *
1608689 ATCCTAATGAAGGGAATGTGTTTTTCGTTCCAATATTGAAAAGAATGGAGACTATTACCAGAAT-
66 ATCCTAATGAAGGGAATGTGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTATTACGAGAATC
* * * * ** * *
1608753 TAGTGATTGTCTAATTTTAGGGAAGAACTTTGATTTCAAGGAAAATAAGGCGAAGAAAAGATTTT
131 GA-TGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATTTT
* * * *
1608818 CATGCAAAAGAAAATCTTCAATACCACTTATCCTAATGAGGAGAATATGTTTATAGCGCCTAATC
195 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATC
* * ** * * * * *
1608883 ACATAATGAATGAAGATAATTACCGGAACTCGTGTTTGTCTCGTTTGAGGCATTAACTTAGACTC
260 ACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGACTT
* * * ** ** * *
1608948 CATAAAATTTGGTGGGAATAAAGATTTTCTTGCCAAACCAAGGCATCAATATCGTGTATCCTTGT
325 TACAAAAATTGGTGGGAA-AAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTTAT
* * * * * *
1609013 GAAAAAACTATGTTTATGGTGCCTAATCCTAAAAAGAATAGGGATTAGTATGACTATTATTGTTT
389 GAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTT
*
1609078 GTCTTATTTAACAGACAAACT
452 GTCTTATTTAAGAGACAAACT
* * * * * *
1609099 TTAATTCGATAAAAAAAGGTGGAAAGAAAAGCTTTTCTTGTGACACAAAAGCATCGATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
** * *
1609164 ATCCTAATGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTAAAGAATGGTGACTGTTACGAGAAT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTATTACGAGAAT
** * * * * *
1609229 CGACACTTGTCTTCTTTAAGCGATA-AACTTTGATTTTAATTAAAATATGGTAAAGAAAAGATTT
130 CGATGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATTT
* * * * *
1609293 TCATGCAAAA-AAAATCATCAATATCATTTATCCTAAGGAAGAGAATGTTTTTATAATGCCTAAT
194 TCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAAT
* * * ** * * * * **
1609357 CAAAAAATAAATAAAGATTTTTGCTAGAATCAATGTTTGTCTCATTT-AGGGCA-CAAAATAGAC
259 CACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGA-GGCATGAACTTAGAC
* * * * ** * * * * *
1609420 TTTACAAAAATTGGTAGTAAAAGTGCCTGTCTTACGAAACCAAACCATTAATATCATGTATTCTA
323 TTTACAAAAATTGGTGGGAAAA-AGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTT
* ** * * *
1609485 ATGAGAAGACTATCTTTGCGGTGCCTAATCCTGAAAAGAATGGGGATTTGTATGACTATTATTGT
387 ATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGT
*
1609550 TTGTCTTATTTAAGGGACAAACT
450 TTGTCTTATTTAAGAGACAAACT
* * * * **
1609573 TTGATTCGGTCAACAACGATGGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCGGTGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * * * *
1609638 ATCCTAAAGAAGCGG-ATATGATTTTGGTTTCAATCTTTTAAAGAATGGTGACTATTATGGGAAT
66 ATCCTAATGAAG-GGAATGTGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * *
1609702 CGATGCTTGTCTTATTTAAAGGGTA-AACTTTGATATCAATTAAAATAGGGTAAAGAAAAGA-TT
130 CGATGCTTGTCTTATTT-AAGGGAAGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATTT
* * * *
1609765 TCAAAGCAAAAGAAAATCATCAATATCATTTATCCCAAGGGGGAG-A-ATG----T-GT--C---
194 TC-ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAA
* *** * * *
1609818 -C-CATAATGAGCAAAGATCATTAGTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGAC
258 TCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
* * * *
1609881 TTTACACAAAATTGGTGGAAAAAATGCCTTCCTTGTGAAACCAAACCATCAATATCATGTATCCT
323 TTTACA-AAAATTGGTGGGAAAAA-GCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCT
* *
1609946 AATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACT-TTAATG
386 TATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATG
*
1610010 TTTGTCTTATTGCAA-AGACAAACT
449 TTTGTCTTATT-TAAGAGACAAACT
** ***
1610034 TTGATTCGATCAAAAATAGTGGAAAGAAAAGCTTTTCTTGCGACACTGTAGCATCAATGTCA-GC
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG-
* * ** * ** * **
1610098 TATCTTAAAGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTTACTGTTGTGAGAA
65 TATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTATTACGAGAA
* * *
1610163 TCGATGCTTGTCTTAGTGAAGGGATA-AACTTTGATTTTAATTAAAATAGGGCAAAGAAAAG-TT
129 TCGATGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATT
* * * *
1610226 TTCCATGCAAAAGAAAATCATCAAAATCATTTATCCTGATGAGGGGAATATGTTTATGGTG-CTA
193 TT-CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCT-
* * * * *
1610290 AATCACAAAATGAATGAAGATCATTAC-AAAATCCGTGTTTGTCTCGTTTGAGGCATGAACATAG
256 AATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAG
* * * *
1610354 ACTTTATAAAAATTGGTAGGAAAATAGCCTTTCTTG-CAACGCCAAAGCATCAATA-CGATGTAT
321 ACTTTACAAAAATTGGTGGGAAAA-AGCCTTTCTTGTGAA-ACCAAAGCATCAATATCG-TGTAT
* * * * * *
1610417 CATAAAGAGAAGACTATGCTTATGGTGCATAATCTTGAAAAGAATGGGGATTTGTATGACTATTA
383 CCTTATGAGAAGACTATGTTTATGGTGC--CATCTTGAAAAGAATGGGGATTAGTATGACTATTA
*
1610482 ATGTTTGTCTTATTTAAGAGACAAACA
446 ATGTTTGTCTTATTTAAGAGACAAACT
* * * * *
1610509 TTGATTCGATCAAAAACAGTGGAATGAAAAGCTTTTCTTGCGACACCAAAGGATCCATGTTATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * * *
1610574 A-CCTAATGACGGGATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGGGACGAATACGAGAAT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * * *
1610638 CGATGCTTGTCTTATTTAGGGGATGAACTTTGATTTTAA-GAAAGATAGGGCAAAGAAAAGATTT
130 CGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCAATTAAA-ATAGGGCAAAGAAAAGATTT
* * *
1610702 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGTGGAGAATGTGTTTATAGTGCCTAAT
194 TCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAAT
* * * *
1610767 CACATAATGAATAAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAAGCACGAACTTAGACT
259 CACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGACT
* * * * *
1610832 TTGCAAAAATTAGTGCGAAAAAAGCCTTTCTTGTGAAACCAAGGCATCAATATCATGTATCCTTA
324 TTACAAAAATTGGTG-GGAAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTTA
*** * *
1610897 TGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTATTG-T
388 TGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTT
* * *
1610961 TATCTTATTTAAGAGATAATCT
451 TGTCTTATTTAAGAGACAAACT
* * * * * ** *
1610983 TCGATTCAATCAAAAACCGTGAAAAGAAAAGCTTTTCCTATGACACCAGAGCATCAATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * * * **
1611048 ATCCTAATGAAGGGACTATATTTTTTGTTCCCAATCTTTTAAAGAATGGTGACTGTTATAAGAAT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * * * * *
1611113 TGATGCTAGTTTTATTTAAGGGATA-AACTTTGATTTAAATTAAAAAAGGGCAAAGAAAAAATTT
130 CGATGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATTT
* * *
1611177 CCATGCAGAAA-AAAATCATCAATATCATTTACCCTAAGGAGGAGAATATGTTTATAGTGCCTAA
194 TCATGCA-AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAA
* *
1611241 TCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAAGCACGAACTTAGAC
258 TCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
* * * * *
1611306 TTTGCAAAAATTAGTGCGAAAAAAGCCTTTCTTGTGAAACCAAGGCATCAATATCATGTATCCTT
323 TTTACAAAAATTGGTG-GGAAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTT
*** * *
1611371 ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTATTG-
387 ATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGT
* * *
1611435 TTATCTTATTTAAGAGATAATCT
450 TTGTCTTATTTAAGAGACAAACT
* * * * * *
1611458 TTGATTCAATCAAAAACCGTGAAAAGAAAAGCTTTTCCTACGACACCAGAGCATCAATGTCATGT
1 TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * **
1611523 ATCCTAATGAAGGGACTATGTTTTTTGTTCCCAATCTTTTAAAGAATGGTGACTATTATAAGAAT
66 ATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * * * *
1611588 TGATGCTAGTTTTATTTAAGGGATA-AACTTTGATTTAAATTAAAAAAGGGCAAAGAAAAGATTT
130 CGATGCTTGTCTTATTTAAGGGA-AGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATTT
* * *
1611652 CCATGCAGAAA-AAAATCATCAATATCATTTACCCTAAGGAGGAGAATATGTTTATAGTGCCTAA
194 TCATGCA-AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAA
* * * *
1611716 TCACAAAATGAATGAAGATCATTACTAGAATCTATGTTTGTCTCATTTGAGGCACGGACTTAGAC
258 TCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
* ** * * * ** *
1611781 TTTACAAAAATTGGTGGTAAAAAGGGTTTTCTTGCGAAGCTAATCCATTAATATCGTGTAAT-CT
323 TTTACAAAAATTGGTGGGAAAAA-GCCTTTCTTGTGAAACCAAAGCATCAATATCGTGT-ATCCT
* * * *
1611845 AATGAGAAGACTATATTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTATTG
386 TATGAGAAGACTATGTTTATGGTGCC--ATCTTGAAAAGAATGGGGATTAGTATGACTATTAATG
* *
1611910 TTTGTCCTATTTAAGAGACAAATT
449 TTTGTCTTATTTAAGAGACAAACT
* * * * * **
1611934 TTGATTCGATC-AAAACAGGTGCACAGAAAAGCTTTTCCTGCAACACCAAGGCATCAATAACATG
1 TTGATTCGATCAAAAAC-GGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* ** * * ** *
1611998 TATCCTAATAAAGGGAAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAATGGTGATTGCTATGAGA
65 TATCCTAATGAAGGGAATGTGTTTTTGGTT-CCAATCTT-TTAAAGAATGGAGACTATTACGAGA
* * * *
1612062 ATCAATCCATGT-TTGATTTAAGGGATA-AACTTTGACTTT-AATTAAAATAGGGCAAAGAATAG
128 ATCGATGCTTGTCTT-ATTTAAGGGA-AGAACTTTGA-TTTCAATTAAAATAGGGCAAAGAAAAG
* * * * *
1612124 ATTTCCATGCAAAAGAAAATCATAAATATCATTTATCCTAATGAGAAAAATGTGTTTATAGTGCC
190 ATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCC
* * * * * *
1612189 TAATCACGAATTGAGTGAAGATCATTACTGGAACCCATGTTTGT-T-ATGTTCGAGGTACGAACT
255 TAATCACAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCAT-TT-GAGGCATGAACT
* * ** * *
1612252 TGGACTTTTCAAAAATTCTTGGGAAAAAAGCCTTTCTTGCGAAACCAAATCATCAATAT-GATGT
318 TAGACTTTACAAAAATTGGTGGG-AAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCG-TGT
* * * *
1612316 AT-CTTAAGGAGAAGACTATGTTTATGGTGCCTAATGGTGGAAAAGAATGGGGATTAGTATGAGT
381 ATCCTT-ATGAGAAGACTATGTTTATGGTGCC--AT-CTTGAAAAGAATGGGGATTAGTATGACT
* * * *
1612380 ATTCATGTTTGTCTTAATTAAGAGGCAAACA
442 ATTAATGTTTGTCTTATTTAAGAGACAAACT
* * * *
1612411 TTGGTT-GTATC-AAAATGGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAGCATCAATGTCATG
1 TTGATTCG-ATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* * ** ** **
1612474 TATCATAATAAAGGGAATGTGTTTTTGGTTTTAATCTTGAAAAGAATGGAGACTGCTACGAGAAT
65 TATCCTAATGAAGGGAATGTGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTATTACGAGAAT
* * *
1612539 CAATGCTTGTCTTATTTAAGGGACGAACTTTGATTTCAAGTAAAATAGGGCAAAGAAAAGATTTT
130 CGATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATTTT
* * * * *
1612604 AATGCAAAAGAAAATCGTCAATATCGTTTATCCTAATGAGGAGAATGTGTTTATGGTGCCTAATC
195 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATC
* * * * * *
1612669 ACAAAATGAGTGAAGATCAAT-CATAGAATCCACGTTTATCTCATTTGAGGCACGAACTTAGACT
260 ACAAAATGAATGAAGATCATTAC-TAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGACT
* * * * *
1612733 TTACAAAAATTGGTGGGAAAATGCCTTTCTTGCGAAAGCAAAACATCAATATCGTGTATCCTAAT
324 TTACAAAAATTGGTGGGAAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTTAT
*
1612798 GAAAAGACTATGTTTATGG
389 GAGAAGACTATGTTTATGG
1612817 CCCCAATCAT
Statistics
Matches: 18629, Mismatches: 3486, Indels: 1992
0.77 0.14 0.08
Matches are distributed among these distances:
457 7 0.00
458 10 0.00
459 108 0.01
460 223 0.01
461 377 0.02
462 636 0.03
463 155 0.01
464 267 0.01
465 140 0.01
466 136 0.01
467 116 0.01
468 150 0.01
469 166 0.01
470 443 0.02
471 849 0.05
472 1545 0.08
473 1733 0.09
474 3225 0.17
475 3694 0.20
476 2483 0.13
477 887 0.05
478 552 0.03
479 274 0.01
480 142 0.01
481 248 0.01
482 63 0.00
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.32
Consensus pattern (472 bp):
TTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
ATCCTAATGAAGGGAATGTGTTTTTGGTTCCAATCTTTTAAAGAATGGAGACTATTACGAGAATC
GATGCTTGTCTTATTTAAGGGAAGAACTTTGATTTCAATTAAAATAGGGCAAAGAAAAGATTTTC
ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCA
CAAAATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCATGAACTTAGACTTT
ACAAAAATTGGTGGGAAAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTGTATCCTTATGA
GAAGACTATGTTTATGGTGCCATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCT
TATTTAAGAGACAAACT
Found at i:1598262 original size:473 final size:474
Alignment explanation
Indices: 1597092--1600815 Score: 4041
Period size: 473 Copynumber: 7.9 Consensus size: 474
1597082 AGGATGAACA
* * * * * ** * * *
1597092 TTGATTCTATAAAAAACGGTGGAAAGAAAAGCTTTTTTTGAAACACCCACGCATCAATGTTATGC
1 TTGATTCAATCAAAAACAGTGAAAAGAAAAGCTTTTCTTGCGACA-CCAAGCATCAATGTCATGT
* * * * *** * *
1597157 ATCCTAACGAAGTGAATGTGTTTTTAGTTCCCAATCTTGAAAAGAATGGAGACTAG-TACGAGAA
65 ATCCTAAAGAAGGGAATATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTGACT-GTTATGAGAA
* * *
1597221 TCAATGCTTGTCTTATTTAAGGGATGAACTTTTATTTT-ATGAAAAATAGGGCAAAGAAAAGATT
129 TCAATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAAT-TAAAATAGGGCAAAGAAAAGATT
* * * * * *
1597285 TCAATGC-AAAGAAAATCATCAGTAATCATTTACCCTATTGAAGAGAATGTGTTTTTATAATG-C
193 TCCATGCAAAAGAAAATCATCAAT-ATCATTTATCCTAATGAGGAGAATGTG--TTTATAGTGCC
* * * * * *
1597348 TGGATCAC-AAATGAATTAAGATCATTATTGGAATCCTTGTTTGTCTCATTT-AGAGCATAAACT
255 T-AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAG-GCATGAACT
* * * * * *
1597411 TAGACTTTACAAAAATTGTTGGTACAAATCCTTTCTTGTGAAACCAAA-CATCAATATCGTGTAT
318 TAGACTTTACAAAAATTGGTGGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTAT
* * * *
1597475 CATTATGAGAAGACTATGTTTATGG-GCCTTAATCTTGAAAAGTATAGGGATTAGTATGACTATT
383 CCTAATGAGAAGACTATGTTTATGGTGCC-TAATCTTGAAAAGAATGGGGATTAGTATGACTATT
** * *
1597539 ACCGTTTGTCTTATTTGATAG-CAAACT
447 AATGTTTGTCTTATTTAAGAGACAAACT
* * *
1597566 TTGATTCGATCAAAACCAAG-G-AAAGAAATTGCTTTTCTTGCGACACCCAAGCATCAATGTCAT
1 TTGATTCAATCAAAAAC-AGTGAAAAGAAA-AGCTTTTCTTGCGACA-CCAAGCATCAATGTCAT
* * * * ** *
1597629 GTATCCTAACGAAGGGAATATG-TTTTGGTACCTAAGCTCTTTTAAGGAATGGTGACAATTACGA
63 GTATCCTAAAGAAGGGAATATGTTTTTGGTTCCCAATCT-TTTTAA-GAATGGTGACTGTTATGA
* * * * * *
1597693 GAATCGATTCTTCTCTTATTT-AGGGAATAAACTTTGATTTTAATTAAAATAAGGTAAA-AAAAT
126 GAATCAATGCTTGTCTTATTTAAGGG-ATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAG
* * *
1597756 ATTTCCATCCAAAAGAAAATCATCAATATCATTTATCCTAATGAGAAGAATATGTTTATAGTGCC
190 ATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCC
* *
1597821 TAATCACAAAATGAATGAAGATCATTGCTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTA
255 TAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTA
* * * * *
1597886 GAC-TTACAAAAGTTGGTGGAAAAGATGCCTTCCTTGTGAAACCAAACCATCAATATCATGTATC
320 GACTTTACAAAAATTGGTGGAAAA-AAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATC
* * *
1597950 CTAATGAGAAAATTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACT-TTAA
384 CTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAA
*
1598014 TG-TTGTCTTATTGCAA-AGACAAACT
449 TGTTTGTCTTATT-TAAGAGACAAACT
* * * **
1598039 TTGATTCGATCAAAAACAGTGAAAAAAAAAGCTTTTCTTGCGACACTATAGCATCAATGTCAACT
1 TTGATTCAATCAAAAACAGTGAAAAGAAAAGCTTTTCTTGCGACACCA-AGCATCAATGTCATGT
* * *
1598104 ATCCTAAAGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTTACTGTTGTGAGAAT
65 ATCCTAAAGAAGGGAATATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTGACTGTTATGAGAAT
* * * * *
1598169 CGAGGCTTGTCTTAATGAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAGTTTTC
130 CAATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAGATTTC
* * * * * *
1598234 TATGCAAAAGAAAATCATCAAAATCATTTATCCTGATGAGGGGAATGTGTTTATGGTGCCAAATC
195 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC
* * *
1598299 ACAAAATGAATGAAGATCATTAC-AAAATCCGTGTTTGTCTCATTTGAGGCATGAACATAGACTT
260 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGACTT
* ** * * *
1598363 TACAAAAATTGGTAGGAAAAGAGCCTTTCTTGC-AATGGCAAAGCGTC-ATATGATGTATCGTAA
325 TACAAAAATTGGT-GGAAAAAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAA
* * * * *
1598426 AGAGAAGACTATGCTTATGGTGCATAATCCTGAAAAGAATGGGGATTTGTATGACTATTAATGTT
388 TGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTT
*
1598491 TGTCTTATTTAAGAGACAAACA
453 TGTCTTATTTAAGAGACAAACT
* * * * * *
1598513 CTGATTCAATCAAAAACAGTGGAATGAAAAGCTTTTCTTGCGACACCAAAGGATCCATGTTATGT
1 TTGATTCAATCAAAAACAGTGAAAAGAAAAGCTTTTCTTGCGACACC-AAGCATCAATGTCATGT
* * * * * * * * *
1598578 AT-CTAATGACGGGATTGTGTTTTTGGTTCCCAATCTTTTAAATAATGGGGAC-GAATACGAGAA
65 ATCCTAAAGAAGGGAATATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTGACTG-TTATGAGAA
* * **
1598641 TCAATGCTTGTCTTATTTAGGGGATGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTT
129 TCAATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAGATTT
* * *
1598706 CCATGCATAAGAAAATTATCAATATCA-TTATCCTAATGTGGAGAATGTGTTTATAGTGCCTAAT
194 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAAT
* * * * * *
1598770 CACATAATGAATAAAGATCATTACTAGAACCCATATTTGTCTCATTTGAAGCATGAACATAGACT
259 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGACT
* * *
1598835 TTATAAAAATTAGTGCGAAAAAAGCCTTT-TTGCGAAACCAAGGCATCAATATCATGTATCCCT-
324 TTACAAAAATTGGTG-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTAT-CCTA
*** * *
1598898 ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTATTG-
387 ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGT
* * *
1598962 TTATCTTATTTAAGAGATAATCT
452 TTGTCTTATTTAAGAGACAAACT
* * * * *
1598985 TTGATTCAATCAAAAACCGTGAAAAGAAAAGCTTTTCCTACAACACTAGAGCATCAATGTCATGT
1 TTGATTCAATCAAAAACAGTGAAAAGAAAAGCTTTTCTTGCGACACCA-AGCATCAATGTCATGT
* * *
1599050 ATCCTAATGAAGGGACTATGTTTTTTGTTCCCAATC-TTTTAAGGAATGGTGACTGTTATGAGAA
65 ATCCTAAAGAAGGGAATATGTTTTTGGTTCCCAATCTTTTTAA-GAATGGTGACTGTTATGAGAA
** * * *
1599114 TTGATGCTAGT-TTTTTTAAGGGATAAACTTTGA-TTTAATTAAAAAAGGGCAAAGAAAAGATTT
129 TCAATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAGATTT
* * *
1599177 CCATGCAGAAGAAAATTATCAATATCA-TTATCCTAATGTGGAGAATGTGTTTATAGTGCCTAAT
194 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAAT
* * * * * *
1599241 CACATAATGAATAAAGATCATTACTAGAACCCATATTTGTCTCATTTGAAGCATGAACATAGACT
259 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGACT
* * * *
1599306 TTATAAAAATTAGTGCGAAAAAAGCCTTTTTTGCGAAACCAAGGCATCAATATCATGTATCCCT-
324 TTACAAAAATTGGTG-GAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTAT-CCTA
*** * *
1599370 ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTATTG-
387 ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGT
* * *
1599434 TTATCTTATTTAAGAGATAATCT
452 TTGTCTTATTTAAGAGACAAACT
* * * * *
1599457 TTGATTCAATC-AAAACCGTGAAAAGAAAAGCTTTTCCTACAACACTAGAGCATCAATGTCATGT
1 TTGATTCAATCAAAAACAGTGAAAAGAAAAGCTTTTCTTGCGACACCA-AGCATCAATGTCATGT
* * *
1599521 ATCCTAATGAAGGGACTATGTTTTTTGTTCCCAATC-TTTTAAGGAATGGTGACTGTTATGAGAA
65 ATCCTAAAGAAGGGAATATGTTTTTGGTTCCCAATCTTTTTAA-GAATGGTGACTGTTATGAGAA
** * * * * *
1599585 TTGATGCTAGTTTTTTTTAAGGGATAAACTTTGATTTAAATTAAAAAAGGGCAAAGAAAAGATTT
129 TCAATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAGATTT
* * *
1599650 CCATGCAGAAA-AAAAACATCAATATCATTTACCCTAA-GAAGGAGAATATGTTTATAGTGCCTA
194 CCATGCA-AAAGAAAATCATCAATATCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTA
* * *
1599713 ATCACAAAATGAATGAAGATCATTACTAGAATCTATGTTTGTC-CAATTTGAGGCACGGACTTAG
257 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTC-ATTTGAGGCATGAACTTAG
* ** * * ** *
1599777 ACTTTACAAAAATTGGTGGTAAAAAGGGTTTTTCTTGCGAAGCTAATCCATTAATATCGA-GTAA
321 ACTTTACAAAAATTGGTGG-AAAAA-AGCCTTTCTTGCGAAACCAAAGCATCAATATC-ATGT-A
* *
1599841 T-CTAATGAGAAGACTATATTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATT
382 TCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT
* * * *
1599905 ATTGTTTGTCCTATTTAAAAGACAAATT
447 AATGTTTGTCTTATTTAAGAGACAAACT
* * * * * **
1599933 TTGATTCGATC-AAAACAGGTGCACAGAACAGCTTTTCTTGCAACACCAAGGCATCAATAACATG
1 TTGATTCAATCAAAAACA-GTGAAAAGAAAAGCTTTTCTTGCGACACCAA-GCATCAATGTCATG
* * * *
1599997 TATCCTAATA-AAGGGAAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAATGGTGATTGCTATGAG
64 TATCCTAA-AGAAGGGAATATGTTTTTGGTTCCCAATCTT-TTTAAGAATGGTGACTGTTATGAG
* * * *
1600060 AATCAATCCATGT-TTGATTTAAGGGATAAACTTTGACTTTAATTAAAATAGGGCAAAGAATAGA
127 AATCAATGCTTGTCTT-ATTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAGA
* * * *
1600124 TTTCCATGCAAAAGAAAATCATAAATATCATTTATTCTAATGAGAAGAAGGTGTTTATAGTGCCT
191 TTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCT
* * * ** * * *
1600189 AATCACGAAATGAATGAAGATCATTACTGGAACCCATGTTTGTCTTGTTCGAGGTACGAACTTAG
256 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAG
* ** * * *
1600254 ACTTTTCAAAAATTCTTGGAAAAAAGCCTTTCTTGCGAAACCAAATCATCAATATGATGTATCTT
321 ACTTTACAAAAATTGGTGGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCT
* ** * * *
1600319 AAGGAGAAGACTATGTTTATGGTGCCTAATGGTGAAAATGAACGGGGATTAGTATGAGTATTCAT
386 AATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAA-GAATGGGGATTAGTATGACTATTAAT
* *
1600384 GTTTGTCTTAATTAAGAGGCAAACT
450 GTTTGTCTTATTTAAGAGACAAACT
* * ** * * * *
1600409 TTGGTTCTATCAAAAATGGTGGAAAGGAAAGTTTTTCTTGCGACACCAAAGCATTAATGTCATGT
1 TTGATTCAATCAAAAACAGTGAAAAGAAAAGCTTTTCTTGCGACACC-AAGCATCAATGTCATGT
* * * *** *
1600474 ATCATAATA-AAGGGAATGTGTTTTTGGTTCTCAATCTTGAAAAGAATGGAGACTGTTATGAGAA
65 ATCCTAA-AGAAGGGAATATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTGACTGTTATGAGAA
* * *
1600538 TCAATGCTTGTCTTATTTAAGGGATGAACTTTGATTTCAAGTAAAATAGGGCAAAGAAAAGATTT
129 TCAATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAGATTT
** ** *
1600603 TAATGCAAAAGAAAATTGTCAATATCGTTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAAT
194 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAAT
* * * * *
1600668 CACAAAATGAGTGAAGATCACT-CATAGAATCCACGTTTATCTCATTTGAGGCATGAACTTAGAA
259 CACAAAATGAATGAAGATCATTAC-TAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
* * * * * *
1600732 TTTAAAAAAATTGGTGGGAAAATGCCTTT-TTGCGAAAGCAAAACATCAATATCGTGTATCCTAA
323 TTTACAAAAATTGGTGGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
*
1600796 TGAAAAGACTATGTTTATGG
388 TGAGAAGACTATGTTTATGG
1600816 CCCCAATCAT
Statistics
Matches: 2781, Mismatches: 400, Indels: 137
0.84 0.12 0.04
Matches are distributed among these distances:
471 313 0.11
472 523 0.19
473 654 0.24
474 381 0.14
475 268 0.10
476 368 0.13
477 269 0.10
478 5 0.00
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.32
Consensus pattern (474 bp):
TTGATTCAATCAAAAACAGTGAAAAGAAAAGCTTTTCTTGCGACACCAAGCATCAATGTCATGTA
TCCTAAAGAAGGGAATATGTTTTTGGTTCCCAATCTTTTTAAGAATGGTGACTGTTATGAGAATC
AATGCTTGTCTTATTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGCAAAGAAAAGATTTCC
ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCA
CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGACTTT
ACAAAAATTGGTGGAAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA
GAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGT
CTTATTTAAGAGACAAACT
Found at i:1599072 original size:158 final size:156
Alignment explanation
Indices: 1598877--1599543 Score: 426
Period size: 158 Copynumber: 4.2 Consensus size: 156
1598867 CGAAACCAAG
*
1598877 GCATCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAAT
1 GCATCAATATCATGTAT-CCTAATGAG-GGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAAT
*
1598941 GT-ATTAGTATGACTATTATTGTTATCTTATTTAAGAGATAATCTTTGATTCAATCAAAAACCGT
64 GTCATTAGTATGACTATTA-TGTTATCTTATTTAAGAGATAATCTTTGATTCAATCAAAAACAGT
1599005 GAAAAGAAAAGCTTTTCCTACAACACTAGA
128 GAAAAGAAAAGCTTTTCCTACAA-ACTAGA
* * * * * ** *
1599035 GCATCAATGTCATGTATCCTAATGAAGGGACTATGTTTTTTGTTCCCAATCTT-TTAAG-GAATG
1 GCATCAATATCATGTATCCTAATG-AGGGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAAT-
* * ** * * * * * *
1599098 GTGACT-GTTATGAGAATTGATGCTAGT-TTTTTTAAGGGATAAACTTTGATTTAATTAAAAA-A
64 GTCATTAG-TATGACTATT-ATGTTA-TCTTATTTAAGAGATAATCTTTGATTCAATCAAAAACA
* * * * ** *
1599160 GGGCAAAGAAAAG-ATTTCCATGCAGAAGAAAA
126 GTGAAAAGAAAAGCTTTTCC-TACA-AACTAGA
** * * * * ** *
1599192 TTATCAATATCAT-TATCCTAATGTGGAGAATGTGTTTATAGTGCCTAATC-ACATAATGAATAA
1 GCATCAATATCATGTATCCTAATGAGG-GACTATGTTTATGGTGCCTAATCTTGA-AAAGAA-AA
* * * * * * * * *
1599255 AGATCATTACTA-GAACCCA-TAT-TTGTCTCATTTGAAG-CATGAA-CATAGACTT-TAT-AAA
63 TG-TCATTAGTATG-A-CTATTATGTTATCTTATTT-AAGAGAT-AATCTTTGA-TTCAATCAAA
* ** * * *
1599313 AATTAGTGCGAA-AAAAGCCTTTT-TTGCGAAACCA-A
122 AA-CAGTGAAAAGAAAAG-CTTTTCCTAC-AAACTAGA
*
1599348 GGCATCAATATCATGTATCCCT-ATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAA
1 -GCATCAATATCATGTAT-CCTAATGAG-GGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAA
*
1599412 TGT-ATTAGTATGACTATTATTGTTATCTTATTTAAGAGATAATCTTTGATTCAATC-AAAACCG
63 TGTCATTAGTATGACTATTA-TGTTATCTTATTTAAGAGATAATCTTTGATTCAATCAAAAACAG
1599475 TGAAAAGAAAAGCTTTTCCTACAACACTAGA
127 TGAAAAGAAAAGCTTTTCCTACAA-ACTAGA
*
1599506 GCATCAATGTCATGTATCCTAATGAAGGGACTATGTTT
1 GCATCAATATCATGTATCCTAATG-AGGGACTATGTTT
1599544 TTTGTTCCCA
Statistics
Matches: 374, Mismatches: 89, Indels: 93
0.67 0.16 0.17
Matches are distributed among these distances:
154 2 0.01
155 11 0.03
156 67 0.18
157 136 0.36
158 137 0.37
159 20 0.05
160 1 0.00
ACGTcount: A:0.36, C:0.14, G:0.16, T:0.33
Consensus pattern (156 bp):
GCATCAATATCATGTATCCTAATGAGGGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAATGT
CATTAGTATGACTATTATGTTATCTTATTTAAGAGATAATCTTTGATTCAATCAAAAACAGTGAA
AAGAAAAGCTTTTCCTACAAACTAGA
Found at i:1608308 original size:159 final size:158
Alignment explanation
Indices: 1607541--1612668 Score: 743
Period size: 158 Copynumber: 32.5 Consensus size: 158
1607531 TTAGTGTGAA
* * * * * *
1607541 AAAAACCTTTCTTGTGAAACCAAGGCAACAATATCATGTA-CCATTATG-A-GAATACTATGTTT
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC-TAATGAAGGGA-A-TATGTTT
* * * * * ** ** * * *
1607603 ATGG-GTCCTAATCTTGAAAAGTATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTGAGAG
63 ATGGTG-CCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGG
* * *
1607667 A-AAACTTTGATTTGATCATAAA-GCATGGAAAG
127 ATAAACTTTGACTTAATCA-AAATG-GTGGAAAG
* * * * * *
1607699 AAAAGCTTTTCTTGTGACACCAAAGAATCAATGTCATGTATCCTAATGAAGGGAATATGTTTTTG
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTATG
* * ** * * *
1607764 GTTCCTAATCTTTTAGTGAATGGTGACTATTACAAGAATCGAT-TCTTCTCTTATTTAAGGGATA
66 GTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGT-TTGTCTTATTTAAGGGATA
* * *
1607828 AACTTTGATTTTAATTAAAATAGG-GTAAAG
130 AACTTTGA-CTTAATCAAAAT-GGTGGAAAG
* * ** ** * *
1607858 AAAAGA-TTTCCATGC-AAAAAAAATTTATCAATATCATTTATCCTAATG-CGGAGAATATGTTT
1 AAAA-ACTTTTCTTGCGAAACCAAA-GCATCAATATCATGTATCCTAATGAAGG-GAATATGTTT
* ** * ** * * * * * * *
1607920 ATAGTGCCTAATC-ACAAAATGAATGAAGGTTATTACTAGAGTCCATGTTTGCCTCATTTGAGGC
63 ATGGTGCCTAATCTTTAAAA-GAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGG
* * * *
1607984 ATGAA-TTTAGACTTTA-CAAAAATTGGCGGGAA-
127 ATAAACTTT-GACTTAATC-AAAA-TGGTGGAAAG
* * * * * *
1608016 AAAAGCTCTTCTTGCAAAACCAAAGCATCAATATGATGTATCCTAATG-AGAAGACTATGTTTAT
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATATGTTTAT
* * * * * * ** * *
1608080 GGTGCCTAACCCTAAAAAAAATGGGGA-TTTGTA-TGGCTATTAATGTTTGTCGTT-TTT-AGGA
65 GGTGCCTAATCTTTAAAAGAATGGAGACTAT-TACAAG-AATCAATGTTTGTC-TTATTTAAGG-
*
1608141 GACAAACTTTGA-TTCAATCAAAAGTGGTGGAAAG
126 GATAAACTTTGACTT-AATCAAAA-TGGTGGAAAG
* * * * *
1608175 AAAAACTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGCATGTGTTTTTG
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTATG
* * *
1608240 GTTCCTAATCTTTTAAAGAATGGAGACTATTACAAGAATCAAT-TCTTGTCTTATTTAAGGGATG
66 GTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGT-TTGTCTTATTTAAGGGATA
* ** *
1608304 AACTTTGATTTTAAGAAAAAATAGG-GTAAAG
130 AACTTTGA-CTTAA-TCAAAAT-GGTGGAAAG
* * * * ** * * * *
1608335 AGAAGA-TTTACATGCAAAAAAAAATCATCAATATCATTTATCCTAATG-AGAAGAAT-CGTTTA
1 A-AAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATATGTTTA
* * * * * * * * * * * * * *
1608397 TAGTGACTAATGAC-AT-AATGAGTGAAGATCT-TTGTC-GGAAACCATATTTGTATCATTTGAG
64 TGGTGCCTAAT--CTTTAAAAGAATGGAGA-CTATT-ACAAGAATCAATGTTTGTCTTATTTAAG
* * * * *
1608458 GCACAAACTTAT-ACTTTATAAAAAGTGGT-G-CAG
125 GGATAAACTT-TGACTTAATCAAAA-TGGTGGAAAG
* * * * * * *
1608491 AAAAAGCCTTTCTTGCGAAACCAAGGAATCAATATCATGTATTCTAA-CAAGAAGACTATGTTTA
1 AAAAA-CTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATATGTTTA
* * * ** ** ** * * *
1608555 TGGTGCCTAATCTTAAAAAGAATAGG-GATTAGTATTACTATTGATTTTTGTCTTATATAAGACG
64 TGGTGCCTAATCTTTAAAAGAAT-GGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAG-GG
* * *
1608619 -CAAACTTTGA-TTATATCAAAAATAGTGGAAGG
127 ATAAACTTTGACTTA-ATC-AAAATGGTGGAAAG
* * * * * * * * *
1608651 AAAAGCTTTTCTTGTGACA-CAAAACATCAATGTCAAGTATCCTAATGAAGGGAATGTGTTTTTC
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTATG
* * * * * * * * *
1608715 GTTCC-AATATTGAAAAGAATGGAGACTATTACCAGAATTAGTGATTGTCTAATTTTAGGGA-AG
66 GTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGGATA-
* ** *
1608778 AACTTTGATTTCAAGGAAAATAAGG-CG-AAG
130 AACTTTGACTT-AATCAAAAT--GGTGGAAAG
* * ** * * *
1608808 AAAAGA-TTTTCATGCAAAAGAAAATCTTCAATACCACT-TATCCTAATG-AGGAGAATATGTTT
1 AAAA-ACTTTTCTTGCGAAACCAAAGCATCAATATCA-TGTATCCTAATGAAGG-GAATATGTTT
* * ** * * ** * ** *
1608870 ATAGCGCCTAATC-ACATAATGAATGAAGA-TAATTACCGGAACTC-GTGTTTGTCTCGTTTGAG
63 ATGGTGCCTAATCTTTA-AAAGAATGGAGACT-ATTACAAGAA-TCAATGTTTGTCTTATTTAAG
* * * ** * *
1608932 GCATTAACTTAGACTCCAT-AAAATTTGGTGGGAAT
125 GGATAAACTTTGACTTAATCAAAA--TGGTGGAAAG
* * * * ** **
1608967 AAAGA-TTTTCTTGCCAAACCAAGGCATCAATATCGTGTATCCTTGTGAA-AAAACTATGTTTAT
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAA-TATGTTTAT
* * * * ** ** * * ** *
1609030 GGTGCCTAATCCTAAAAAGAATAGG-GATTAGTATGACTATTATTGTTTGTCTTATTTAACAGAC
65 GGTGCCTAATCTTTAAAAGAAT-GGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGGAT
* * * *
1609094 AAACTTT-AATTCGATAAAAAAAGGTGGAAAG
129 AAACTTTGACTT-AAT-CAAAATGGTGGAAAG
* * * * * * * *
1609125 AAAAGCTTTTCTTGTGACACAAAAGCATCGATGTCATGTATCCTAATGAAGGGAAAATGTTTTTG
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTATG
* * * * * * * *** * *
1609190 GTTCCCAATCTTTTAAAGAATGGTGACTGTTACGAGAATCGACACTTGTCTTCTTTAAGCGATAA
66 GTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGGATAA
* * *
1609255 ACTTTGATTTTAATTAAAAT-ATGGTAAAG
131 ACTTTGA-CTTAATCAAAATGGTGG-AAAG
* ** * * * * * *
1609284 AAAAGA-TTTTCATGC-AAAAAAAATCATCAATATCATTTATCCTAAGGAAGAGAATGTTTTTAT
1 AAAA-ACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTAT
** ** * ** * * * * *
1609347 AATGCCTAATC-AAAAAATAAATAAAGATTTTTGCTAGAATCAATGTTTGTCTCATTT-AGGGCA
65 GGTGCCTAATCTTTAAAA-GAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGG-A
* * * * * *
1609410 CAAA-ATAGACTTTA-CAAAAATTGGTAGTAA-
128 TAAACTTTGACTTAATC-AAAA-TGGTGGAAAG
*** * * * * * * * * * **
1609440 AAGTGCCTGTCTTACGAAACCAAACCATTAATATCATGTATTCTAATG-AGAAGACTATCTTTGC
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATATGTTTAT
* * * ** * * *
1609504 GGTGCCTAATCCTGAAAAGAATGGGGA-T-TTGTATGACTATTATTGTTTGTCTTATTTAAGGGA
65 GGTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGA--ATCAATGTTTGTCTTATTTAAGGGA
* ** * *
1609567 CAAACTTTGA-TTCGGTCAACAACGATGGAAAG
128 TAAACTTTGACTT-AATCAA-AATGGTGGAAAG
* * * ** * *
1609599 AAAAGCTTTTCTTGTGACACCAAAGCATCGGTGTCATGTATCCTAAAGAAGCGG-ATATGATTT-
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATATG-TTTA
** * * *** * *
1609662 TGGTTTC-AATCTTTTAAAGAATGGTGACTATTATGGGAATCGATGCTTGTCTTATTTAAAGGG-
64 TGGTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTT-AAGGGA
* *
1609725 TAAACTTTGA-TATCAATTAAAATAGG-GTAAAG
128 TAAACTTTGACT-T-AATCAAAAT-GGTGGAAAG
** * ** * * * *
1609757 AAAAGA--TTTCAAAGCAAAAGAAAATCATCAATATCATTTATCCCAA-G-GGGGAGA-ATG---
1 AAAA-ACTTTTC-TTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGA-ATATGTTT
* * ** * ** * * * *
1609814 -T-GTCCCATAA---TGAGCA-AA--GA-TC-ATTAGTAGAATCCATGTTTGTCTCATTTGAGGC
63 ATGGTGCC-TAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGG
** *
1609869 ACGAACTTAGACTTTACA-CAAAATTGGTGGAAA-
127 ATAAACTTTGAC-TTA-ATCAAAA-TGGTGGAAAG
** * * * * * *
1609902 AAATGCCTTCCTTGTGAAACCAAACCATCAATATCATGTATCCTAATG-AGAAGACTATGTTTAT
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATATGTTTAT
* * ** * * * * *
1609966 GGTGCCTAATCTTGAAAAGAATGGGGA-T-TTGTATGACTTTAATGTTTGTCTTATTGCAA-AGA
65 GGTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGA-ATCAATGTTTGTCTTATT-TAAGGGA
* * *
1610028 CAAACTTTGA-TTCGATCAAAAATAGTGGAAAG
128 TAAACTTTGACTT-AATC-AAAATGGTGGAAAG
* * *** * * * * *
1610060 AAAAGCTTTTCTTGCGACACTGTAGCATCAATGTCA-GCTATCTTAAAGAAGGGAAAATGTTTTT
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATG-TATCCTAATGAAGGGAATATGTTTAT
* * ** ** * *** * * * *
1610124 GGTTCCCAATCTTTTTAAGAATGGTTACTGTTGTGAGAATCGATGCTTGTCTTAGTGAAGGGATA
65 GGTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGGATA
* * *
1610189 AACTTTGATTTTAATTAAAATAGG-GCAAAG
130 AACTTTGA-CTTAATCAAAAT-GGTGGAAAG
* * * ** * * * * *
1610219 -AAAAGTTTTCCATGCAAAAGAAAATCATCAAAATCATTTATCCTGATGAGGGGAATATGTTTAT
1 AAAAACTTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTAT
** * ** ** * *
1610283 GGTG-CTAAATC-ACAAAATGAATGAAGA-TCATTACAA-AATCCGTGTTTGTCTCGTTTGAGGC
65 GGTGCCT-AATCTTTAAAA-GAATGGAGACT-ATTACAAGAATCAATGTTTGTCTTATTTAAGGG
* * * * *
1610344 ATGAACATAGACTTTATAAAAATTGGTAGG-AA-
127 ATAAACTTTGACTTAATCAAAA-TGGT-GGAAAG
* * * * * * * * *
1610376 AATAGCCTTTCTTGC-AACGCCAAAGCATCAATA-CGATGTATCATAAAG-AGAAGACTATGCTT
1 AAAAACTTTTCTTGCGAA-ACCAAAGCATCAATATC-ATGTATCCTAATGAAG-GGAATATGTTT
* * * ** * * *
1610438 ATGGTGCATAATCTTGAAAAGAATGGGGA-T-TTGTATGACTATTAATGTTTGTCTTATTTAAGA
63 ATGGTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGA--ATCAATGTTTGTCTTATTTAAGG
* * * ** *
1610501 GACAAACATTGA-TTCGATCAAAAACAGTGGAATG
126 GATAAACTTTGACTT-AATC-AAAATGGTGGAAAG
* * * * * * * * * *
1610535 AAAAGCTTTTCTTGCGACACCAAAGGATCCATGTTATGTA-CCTAATGACGGGATTGTGTTTTTG
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTATG
* * * * * * * * * * * *
1610599 GTTCCCAATCTTTTAAATAATGGGGACGAATACGAGAATCGATGCTTGTCTTATTTAGGGGATGA
66 GTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGGATAA
* * *
1610664 ACTTTGATTTTAA-GAAAGATAGG-GCAAAG
131 ACTTTGA-CTTAATCAAA-AT-GGTGGAAAG
* * * ** * * * *
1610693 AAAAGA-TTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATG-TGGAGAATGTGTTTA
1 AAAA-ACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGG-GAATATGTTTA
* ** * ** * * * *
1610756 TAGTGCCTAATC-ACATAATGAATAAAGA-TCATTACTAGAACCCATGTTTGTCTCATTTGAA-G
64 TGGTGCCTAATCTTTA-AAAGAATGGAGACT-ATTACAAGAATCAATGTTTGTCTTATTT-AAGG
* ** * *
1610818 CACGAACTTAGACTT--TGCAAAAATTAGTGCG-AA-
126 GATAAACTTTGACTTAAT-C-AAAA-TGGTG-GAAAG
* * * * * * *
1610851 AAAAGCCTTTCTTGTGAAACCAAGGCATCAATATCATGTATCCTTATG-AGAAGACTATGTTTAT
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATATGTTTAT
* * * * * * * *
1610915 GGTGCCTAATCTTGAAAAGAA---A-ATGTATTAGTATGACTATTATTG-TTATCTTATTTAAGA
65 GGTGCCTAATCTTTAAAAGAATGGAGA-CTATTA-CAAGA--ATCAATGTTTGTCTTATTTAAGG
* * ** *
1610975 GATAATCTTCGA-TTCAATCAAAAACCGTGAAAAG
126 GATAAACTTTGACTT-AATC-AAAATGGTGGAAAG
* * ** * * * * * * *
1611009 AAAAGCTTTTCCTATGACACCAGAGCATCAATGTCATGTATCCTAATGAAGGGACTATATTTTTT
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTATG
* * * * * * ** * * *
1611074 GTTCCCAATCTTTTAAAGAATGGTGACTGTTATAAGAATTGATGCTAGTTTTATTTAAGGGATAA
66 GTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGGATAA
* * * *
1611139 ACTTTGATTTAAATTAAAAAAGG-GCAAAG
131 ACTTTGACTT-AA-TCAAAATGGTGGAAAG
* * * * * * * *
1611168 AAAAAATTTCCATGCAGAAA-AAAATCATCAATATCATTTACCCTAA-GGAGGAGAATATGTTTA
1 AAAAACTTTTCTTGC-GAAACCAAAGCATCAATATCATGTATCCTAATGAAGG-GAATATGTTTA
* ** * * * * *
1611231 TAGTGCCTAATC-ACAAAATGAATGAAGA-TCATTACTAGAACCCATGTTTGTCTCATTTGAA-G
64 TGGTGCCTAATCTTTAAAA-GAATGGAGACT-ATTACAAGAATCAATGTTTGTCTTATTT-AAGG
* ** * *
1611293 CACGAACTTAGACTT--TGCAAAAATTAGTGCG-AA-
126 GATAAACTTTGACTTAAT-C-AAAA-TGGTG-GAAAG
* * * * * * *
1611326 AAAAGCCTTTCTTGTGAAACCAAGGCATCAATATCATGTATCCTTATG-AGAAGACTATGTTTAT
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATATGTTTAT
* * * * * * * *
1611390 GGTGCCTAATCTTGAAAAGAA---A-ATGTATTAGTATGACTATTATTG-TTATCTTATTTAAGA
65 GGTGCCTAATCTTTAAAAGAATGGAGA-CTATTA-CAAGA--ATCAATGTTTGTCTTATTTAAGG
* ** *
1611450 GATAATCTTTGA-TTCAATCAAAAACCGTGAAAAG
126 GATAAACTTTGACTT-AATC-AAAATGGTGGAAAG
* * * * * * * * *
1611484 AAAAGCTTTTCCTACGACACCAGAGCATCAATGTCATGTATCCTAATGAAGGGACTATGTTTTTT
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTATG
* * * * * ** * * *
1611549 GTTCCCAATCTTTTAAAGAATGGTGACTATTATAAGAATTGATGCTAGTTTTATTTAAGGGATAA
66 GTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGGATAA
* * * *
1611614 ACTTTGATTTAAATTAAAAAAGG-GCAAAG
131 ACTTTGACTT-AA-TCAAAATGGTGGAAAG
* * * * * * *
1611643 AAAAGA-TTTCCATGCAGAAA-AAAATCATCAATATCATTTACCCTAA-GGAGGAGAATATGTTT
1 AAAA-ACTTTTCTTGC-GAAACCAAAGCATCAATATCATGTATCCTAATGAAGG-GAATATGTTT
* ** * * * * *
1611705 ATAGTGCCTAATC-ACAAAATGAATGAAGA-TCATTACTAGAATCTATGTTTGTCTCATTTGAGG
63 ATGGTGCCTAATCTTTAAAA-GAATGGAGACT-ATTACAAGAATCAATGTTTGTCTTATTTAAGG
* *** * * *
1611768 CACGGACTTAGACTTTA-CAAAAATTGGTGGTAA-
126 GATAAACTTTGACTTAATC-AAAA-TGGTGGAAAG
*** * * ** * * * * *
1611801 AAAGGGTTTTCTTGCGAAGCTAATCCATTAATATCGTGTAAT-CTAATG-AGAAGACTATATTTA
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGT-ATCCTAATGAAG-GGAATATGTTTA
* * ** * * * * *
1611864 TGGTGCCTAATCTTGAAAAGAATGGGGA-T-TTGTATGACTATTATTGTTTGTCCTATTTAAGAG
64 TGGTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGA--ATCAATGTTTGTCTTATTTAAGGG
* * * * * *
1611927 ACAAATTTTGA-TTCGATCAAAACAGGTGCACAG
127 ATAAACTTTGACTT-AATCAAAA-TGGTGGAAAG
* * * * * * *
1611960 AAAAGCTTTTCCTGC-AACACCAAGGCATCAATAACATGTATCCTAATAAAGGGAAAATGTTTTT
1 AAAAACTTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTAT
* * * * * ** ** ***
1612024 GGTTCCCAAT-TTGTTAAAGAATGGTGATTGCTATGAGAATCAATCCATGT-TTGATTTAAGGGA
65 GGTGCCTAATCTT-TAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTT-ATTTAAGGGA
* *
1612087 TAAACTTTGACTTTAATTAAAATAGG-GCAAAG
128 TAAACTTTGAC-TTAATCAAAAT-GGTGGAAAG
* * * * ** * * * ** *
1612119 AATAGA-TTTCCATGCAAAAGAAAATCATAAATATCATTTATCCTAATG-AGAAAAATGTGTTTA
1 AA-AAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATATGTTTA
* *** ** * * ** * * *
1612182 TAGTGCCTAATCACGAATTGAGTGAAGA-TCATTACTGGAACCCATGTTTG--TTATGTTCGAGG
64 TGGTGCCTAATCTTTAAAAGAATGGAGACT-ATTACAAGAATCAATGTTTGTCTTAT-TT-AAGG
* ** * * ** *
1612244 TACGAACTTGGACTT-TTCAAAAATTCTTGGGAA-
126 GATAAACTTTGACTTAATC-AAAA-TGGTGGAAAG
* * * * * * * *
1612277 AAAAGCCTTTCTTGCGAAACCAAATCATCAATATGATGTATCTTAA-GGAGAAGACTATGTTTAT
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATATGTTTAT
* ** * * * ** * *
1612341 GGTGCCTAATGGTGGAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTGTCTTAATTAAGAGG
65 GGTGCCTAAT-CTTTAAAAGAATGGAGACTATTACAAG-AATCAATGTTTGTCTTATTTAAG-GG
* * * *
1612405 -CAAACATTG-GTTGTATCAAAATGGTGGAAAG
127 ATAAACTTTGACTT-AATCAAAATGGTGGAAAG
* ** * * * * * *
1612436 GAAAGTTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCATAATAAAGGGAATGTGTTTTTG
1 AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTATG
** * ** * * **
1612501 GT-TTTAATCTTGAAAAGAATGGAGACTGCTACGAGAATCAATGCTTGTCTTATTTAAGGGACGA
66 GTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGGATAA
* *
1612565 ACTTTGATTTCAAGT-AAAATAGG-GCAAAG
131 ACTTTGACTT-AA-TCAAAAT-GGTGGAAAG
** * ** * * * * *
1612594 AAAAGA-TTTTAATGCAAAAGAAAATCGTCAATATCGTTTATCCTAATG-AGGAGAATGTGTTTA
1 AAAA-ACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGG-GAATATGTTTA
1612657 TGGTGCCTAATC
64 TGGTGCCTAATC
1612669 ACAAAATGAG
Statistics
Matches: 3417, Mismatches: 1226, Indels: 653
0.65 0.23 0.12
Matches are distributed among these distances:
144 3 0.00
145 65 0.02
146 13 0.00
147 7 0.00
149 2 0.00
150 2 0.00
151 7 0.00
152 5 0.00
153 2 0.00
154 6 0.00
155 26 0.01
156 60 0.02
157 414 0.12
158 1385 0.41
159 1213 0.35
160 168 0.05
161 37 0.01
162 2 0.00
ACGTcount: A:0.36, C:0.13, G:0.18, T:0.32
Consensus pattern (158 bp):
AAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATATGTTTATG
GTGCCTAATCTTTAAAAGAATGGAGACTATTACAAGAATCAATGTTTGTCTTATTTAAGGGATAA
ACTTTGACTTAATCAAAATGGTGGAAAG
Found at i:1614372 original size:475 final size:473
Alignment explanation
Indices: 1613440--1616924 Score: 3822
Period size: 475 Copynumber: 7.4 Consensus size: 473
1613430 TGAAGAGAAA
* * * ** *
1613440 ATCATTATTGGAATCCTTGTTTGTCTCATTT-AGAGCATAAACTTAGACTTTACAAAAATTGCTG
1 ATCATTACTAGAATCCATGTTTGTCTCATTTGAG-GCACGAACTTAGACTTTACAAAAATTGGTG
* ** * * * * * * *
1613504 GTATAAATGCCTTTCTTGTGAAACCAAACCATCAATATCGTGTATCATTACGAGAAGACTACGTT
65 GGA-AAAAACCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTT
* * * * *
1613569 TATGG-GCCTTAATCTTGAAAAGTATAGGGATTAGTATGACTATTACTGTTTGTCTTATTTGATA
129 TATGGTGCC-TAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGA
* * *
1613633 GACAAACTTTGATTCGATCAAAAAC-CATGGAAAGAAATGA-TTTTCTTGCAACACCAAAGCATC
193 GACAAACTTTGATTCGATCAAAAACGGA-GGAAAGAAA-AACTTTTCTTGCGACACCAAAGCATC
* * * * *
1613696 AATGTCATGTATCCTAACGAAGGGAATATGTTTTCGGTTCCTAATCTTTTAAGGAATGGTGACAA
256 AATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCTAATCTTTTAA-AAATGGAGACTA
* * ** *
1613761 TT-CGAGAATCGATTCTTCTCTTATTTAAGGGATAAACTTTGATTTTAATTAAAATAAGGTAAAG
320 TTACGAGAATCGATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGGTAAAG
* **
1613825 AAAATATTTCCATCCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATA
385 AAAAGATTTCCATGAAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT-TGTTTATA
*
1613890 TTGCCTAATCACAAAATGAATGAAG
449 GTGCCTAATCACAAAATGAATGAAG
* *
1613915 ATCATTGCTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTGT
1 ATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTGG
* * * ** *
1613980 TAAAGAAACCCTTCTTGCAAAACCAAAGTGTCAATATAATGTATCCTAATGAGAAGACTATGTTT
66 GAAA-AAACCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTTT
* * * *
1614045 ATGGTGCGTAAGCGTGAAAAGAATGGGGATTGGTATGACTATTAATGTTTGTCTT-TTTAAAGAG
130 ATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTT-AAGAG
** * *
1614109 ACAAACTTTGATTTAATAAAAAACGGAGGAAAGAAAAACTTTTCTTGCGACAGCAAAGCATCAAT
194 ACAAACTTTGATTCGATCAAAAACGGAGGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAAT
* * *
1614174 GTCATGTAACCTAATGAAGGGAATGTGTTTTTGGTTCCTAATTTTTTTAAAAATGGAGACTATTA
259 GTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCTAA-TCTTTTAAAAATGGAGACTATTA
* * * *
1614239 CGAGAATCAATTCTTGTCTTGTTTAAAGGATGAACTTTGATTTTCAGAAAAATAGGGTAAAGAAA
323 CGAGAATCGATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGGTAAAGAAA
* *
1614304 AGATTTCTATGAAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATTATTTATAGTGC
388 AGATTTCCATGAAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATTGTTTATAGTGC
*
1614369 CTAATCACATAATGAATGAAG
453 CTAATCACAAAATGAATGAAG
* * * * * * * **
1614390 ATCATTTC-CGCAACCCATGTTTGTCTTATTTGAGGCACAAACTTATACTTTATAGCAATTGGTG
1 ATCATTACTAG-AATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTG
* * * * * *
1614454 CGAGAAAAGCCTTTCTTGTGAAACCAAGGCATCAATATCGTGCATCCTAATGAGAAGACTATGTT
65 GGA-AAAAACCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTT
* * * * *
1614519 TATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTGTGACTATTCATGTTTGTCTTATATATGAC
129 TATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGAG
* * * * * * * *
1614584 ACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGCTTTTCTTACGATACCAAAACATCAAT
194 ACAAACTTTGATTCGATCAAAAACGGAGGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAAT
* * * **
1614649 GTCAAGTATCCTAATGAAGGGAATTTGTTTTTTGTTCC-AATCTTGAAAAGAATGGAGACTATTA
259 GTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCTAATCTTTTAAA-AATGGAGACTATTA
* ** ** * * * * *
1614713 TGAGAATTAATGATTGTCGTGT-TTTAA-GGAAGAACTTTGATTTCAAGGAAAATAAGGCAAAGA
323 CGAGAATCGATTCTTGTC-T-TATTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGGTAAAGA
* * * *
1614776 AAAGATTTTCATGCAAAAGAAAATCTTCAATATCATTTATCCTAATAAGGAGAATATGTTTATAG
386 AAAGATTTCCATGAAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT-TGTTTATAG
** * *
1614841 CACCAAATCACATAATGAATGAAG
450 TGCCTAATCACAAAATGAATGAAG
* * * * *
1614865 ATCATTACTAGAACCCTTGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAGAATTTGGTGG
1 ATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTGG
* * * ** * * * * * *
1614930 GAATGAAGCTTTTCTTATGAAACCAAGGCATCAATGTCGTGTATCCTTATGAAAAAACTATGTTT
66 GAA-AAAACCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTTT
* * * *
1614995 ATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTCTTATTGTTTGTCTTATTTAA-AGG
130 ATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGA-G
* * * * * *
1615059 ACAAACTTTAATTCGATAAAAAAC-GATGGAAAGAAACACATTTCTTGCAACACCAAAGCATTAA
194 ACAAACTTTGATTCGATCAAAAACGGA-GGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAA
* * *
1615123 TGTCATGTATCCTAATGAAGGGAAAATG-TTTTGGTTCCCAATCTTTTAAAAAATGGTGACTATT
258 TGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCTAATCTTTT-AAAAATGGAGACTATT
* * * * **** *
1615187 ATGAGAATCGATGCTTGTCTTCTTTAAGGGATAAACTTTGATTTTTTTTTTAAAATAGGGCAAAG
322 ACGAGAATCGATTCTTGTCTTATTTAAGGGATGAACTTTGA--TTTTAAGAAAAATAGGGTAAAG
* * *
1615252 AAAAGATTTCCAAGAAAAAGAAAATCATTAATATCATTTATCC---TCAGGAG--TTAG---A-A
385 AAAAGATTTCCATGAAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATT-GTTTATA
* *
1615308 -TG--T-GTCACAAAATGAATGAAC
449 GTGCCTAATCACAAAATGAATGAAG
* *
1615329 ATCATTACTAGAATCCATGTTTGTCTCTTTTAAGGCACGAACTTAGACTTTACAAAAATTGGTGG
1 ATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTGG
* ** * * * * *
1615394 TAGAAATGCCTTTCTTGTGAATCCAAACCATCAATATCATGTATCCCAATGAGAAAACT-TGTTT
66 GA-AAAAACCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTTT
* * * * * * *
1615458 ATCGTGGCTAATCTTGAAAAGAATGAGGATTTGTATGCCTACTAATGTTTGTCTTGTTTAAGAGA
130 ATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGAGA
* * * *
1615523 CAAACTTCGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAGTG
195 CAAACTTTGATTCGATCAAAAACGGAGGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATG
** * * * * * *
1615588 TCGCGTATCCTAATGAAGGAAATGTATTTTTAGTTTGC-AATCTTTTAAAGAGA-GGAGACTGTT
260 TCATGTATCCTAATGAAGGGAATATGTTTTT-GGTTCCTAATCTTTTAAA-A-ATGGAGACTATT
* * * *
1615651 ACAAGAATTGATTCTTGTCTTATTTAAGGGGTGAACTTTGATTTTAAGAAAAATAGGGCAAAGAA
322 ACGAGAATCGATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGGTAAAGAA
* * *
1615716 AAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATAAGGAGAACGTGTTTATAGT
387 AAGATTTCCATGAAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAA-TTGTTTATAGT
*
1615781 GCCTAGTCACAAAATGAATGAAG
451 GCCTAATCACAAAATGAATGAAG
* * * * * *
1615804 ATCATTACT-GAAACCCATGTTTATCTCATTTGAGGCATGAACTTAGACTTTGCAAAATTTTGTG
1 ATCATTACTAG-AATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTG
* * * * * *
1615868 TGAAAAAAACCTTTCTTGCAAAACCAAGGCATCAATATCATGTA-CCATTATGGGAATACTATGT
65 -GGAAAAAACCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC-TAATGAGAAGACTATGT
* * * * *
1615932 TTATGG-GTCCTAATCTTGAAAAGTATGGGGATTAGTATGACTATTATTGTTTATCTTCTTTGAG
128 TTATGGTG-CCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAG
* * *
1615996 AGA-AAACTTTGATTCGATCACAAA-GCATGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
192 AGACAAACTTTGATTCGATCAAAAACGGA-GGAAAGAAAAACTTTTCTTGCGACACCAAAGCATC
* * ** *
1616059 AATGTCATGTATCCTAAAGAAGGGAATATGTTTTTGGTTCCCAATCTTTTAGTGAATGGTGACTA
256 AATGTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCTAATCTTTTA-AAAATGGAGACTA
* * * * **
1616124 TCACAAGAATCGATTCTTCTCTTATTTAAGGGATAAACTTTGATTTTAATTAAAATAGGGTAAAG
320 TTACGAGAATCGATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGGTAAAG
* *
1616189 AAAAGATTTCCATGCAAAAA-AAAATTATCAATATCATTTATCCTAATGCGGAGAATATGTTTAT
385 AAAAGATTTCCATG-AAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT-TGTTTAT
1616253 AGTGCCTAATCACAAAATGAATGAAG
448 AGTGCCTAATCACAAAATGAATGAAG
* * * * *
1616279 ATCATTACTAGAGTCCATGTTTGCCTCATTTGAGGCATGAATTTAGACTTTACAAAAATTGGCGG
1 ATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTGG
* * *
1616344 GAAAAAAGCTCTTCTTGCAAAACCAAAGCATCAATATGATGTATCCTAATGAGAAGACTATGTTT
66 GAAAAAACCT-TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTTT
* * * * * *
1616409 ATGGTGCCTAACCCT-AAAAAAATGGGGATTTGTATGGCTATTAATGTTTGTCGTT-TTTAGGAG
130 ATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTC-TTATTTAAGAG
* ** *
1616472 ACAAACTTTGATTCAATCAAAAGTGGAGGAAAGAAAAACTTTTCTTGCAACACCAAAGCATCAAT
194 ACAAACTTTGATTCGATCAAAAACGGAGGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAAT
*
1616537 GTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCTAATCTTTTAAAGAATGGAGACTATTA
259 GTCATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCTAATCTTTTAAA-AATGGAGACTATTA
* * *
1616602 CAAGAATCAATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGGTAAAGAGA
323 CGAGAATCGATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGGTAAAGAAA
* * * *
1616667 AGATTTACATGCAAAAAAAAAATCATCAATATCATTTATCCTAATGAGAAGAATCGTTTATAGTG
388 AGATTTCCATG-AAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATTGTTTATAGTG
* * * *
1616732 ACTAATGACATAATGAGTGAAG
452 CCTAATCACAAAATGAATGAAG
* * ** * * * * * * * *
1616754 ATCTTTGCCGGAAACCATATTTGTATCATTTGAGGCACAAACTTATACTTTATAGAAAGTGGTGC
1 ATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTG-
* * * * * **
1616819 AGAAAAAGCCTTTCTTGCGAAACCAAGGAATCAATATCATGTATTCTAACAAGAAGACTATGTTT
65 GGAAAAAACCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTTT
* * *
1616884 ATGGTGCCTAATCTTAAAAAGAATAGGGATTAGTATTACTA
130 ATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTA
1616925 CTGAGTTTTG
Statistics
Matches: 2524, Mismatches: 417, Indels: 137
0.82 0.14 0.04
Matches are distributed among these distances:
462 58 0.02
463 133 0.05
464 174 0.07
465 12 0.00
467 1 0.00
468 2 0.00
469 1 0.00
470 1 0.00
471 2 0.00
472 4 0.00
473 7 0.00
474 198 0.08
475 1621 0.64
476 256 0.10
477 54 0.02
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.32
Consensus pattern (473 bp):
ATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTGG
GAAAAAACCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTATGTTTA
TGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAGAGAC
AAACTTTGATTCGATCAAAAACGGAGGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAATGT
CATGTATCCTAATGAAGGGAATATGTTTTTGGTTCCTAATCTTTTAAAAATGGAGACTATTACGA
GAATCGATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGGTAAAGAAAAGA
TTTCCATGAAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATTGTTTATAGTGCCTA
ATCACAAAATGAATGAAG
Found at i:1618484 original size:13 final size:13
Alignment explanation
Indices: 1618466--1618491 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
1618456 TACACAAAGT
1618466 ATGTATCGATACA
1 ATGTATCGATACA
1618479 ATGTATCGATACA
1 ATGTATCGATACA
1618492 CAAAAAATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:1618489 original size:32 final size:33
Alignment explanation
Indices: 1618448--1618511 Score: 103
Period size: 32 Copynumber: 2.0 Consensus size: 33
1618438 TAGCTAAACT
**
1618448 TGTATCGATACACAAAGTA-TGTATCGATACAA
1 TGTATCGATACACAAAAAATTGTATCGATACAA
1618480 TGTATCGATACACAAAAAATTGTATCGATACA
1 TGTATCGATACACAAAAAATTGTATCGATACA
1618512 TTGGCTTGTA
Statistics
Matches: 29, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
32 17 0.59
33 12 0.41
ACGTcount: A:0.42, C:0.16, G:0.14, T:0.28
Consensus pattern (33 bp):
TGTATCGATACACAAAAAATTGTATCGATACAA
Found at i:1620198 original size:475 final size:471
Alignment explanation
Indices: 1619263--1625550 Score: 6467
Period size: 475 Copynumber: 13.3 Consensus size: 471
1619253 ATAAGCTTTC
* * * *
1619263 ATGAATGAAGATCATTGCTAGAATCCATGTTTGTCTCACTTAAGGCACGAACTTAGACTTTACAA
1 ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
* * * * * *
1619328 AAATTGGTGTTAAAGAAACCCTTCTTGCAAAACCAAAGCGTCAATATAATGTATCCTAATGAGAA
66 AAATTGGTG-GAAA-AAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAA
* * *
1619393 GACTATGTTTATGGTGCCTAAGCGTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCTT
129 GACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTCTT
** * * *
1619458 -TTTAAAGAGACAAACTTTGATTTAATAAAAAACGGAGGAAAGAAAAACTTTTCTTGCGACACCA
193 ATTT-AAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCA
* * * *
1619522 AAGCATCAATGTCATGTAACCTAATGAAGGGAATGTGTTTTTGGTTCCTAATTTTTTAAAAAATG
257 AAGCATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTTCC-AATCTTTTAAAGAATG
* * * * * *
1619587 GAGACTGTTACGAGAATCAATTCTTGCCTTGTTTAAAGGATGAACTTTGATTTTCAGAAAAATAG
321 GAGACTGTTACGAGAATCAATGCTTGTCTTATTT-AAGGAAGAACTTTGATTTTAAGTAAAATAG
* * *
1619652 GGTAAAGAAAAGA-TTTCTATGAAAAAGAAAATCATCAATATCATTTAACCTAATGAGGAGAAT-
385 GGCAAAGAAAAGATTTTC-ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATG
* * *
1619715 TATTTATAGTGCCGAATCACATA
449 TGTTTATAGTGCCTAATCACAAA
* * * * * * * **
1619738 ACGTATGAAGATCATT-TTCGGAACCCATGTTTGTCTTATTTGAGGCACAAACTTATACTTTGTA
1 ATGAATGAAGATCATTACT-AGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACA
** * * * *
1619802 GCAATTGGTGTGAGAAAAGCCTTTCTTGTGAAACCAAGGCATCAATATCGTGCATCCTAATGAGA
65 AAAATTGGTG-GA-AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA
*
1619867 AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTGTGACTATTCATGTTTGTCT
128 AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTCT
* * * * * * * *
1619932 TATATATGACACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGCTTTTCTTACGATACCA
192 TATTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCA
* * * **
1619997 AAACATCAATGTCAAGTATCCTAATGAAGGGAAAGTGTTTTTTGTTCCAATCTTGAAAAGAATGG
257 AAGCATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTTCCAATCTTTTAAAGAATGG
* * * * * * *
1620062 AGACTATTACGAGAATTAATGATTGTCGTATTTTAAGGAAGAACTTTGATTTCAAGGAAAATAAG
322 AGACTGTTACGAGAATCAATGCTTGTCTTA-TTTAAGGAAGAACTTTGATTTTAAGTAAAATAGG
* * *
1620127 GCAAAGAAAAGATTTTCATGCAAAAGAAAATCTTCAATATCATTTATCCTAATAAGGAGAATATG
386 GCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTG
* *
1620192 TTTATAGCGCCTAATCACATA
451 TTTATAGTGCCTAATCACAAA
* * *
1620213 ATGAATGAAGATCATTACTAGAACCCTTGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAG
1 ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
* * ** * * * * ** *
1620278 AATTTGGTGGGAATAAAGCTTTTCTTATGAAACCAAGGCATCAATGTCGTGTATCGTTGTGAAAA
66 AAATTGGT-GGAA-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAA
* * * *
1620343 AACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTCTTATTGTTTGTCTT
129 GACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTCTT
* * ** *
1620408 ATTTAAAAGACAAACTTTAATTCGATCAAAAACAATGGAAAGAAAAGCATTTCTTGCGACACCAA
193 ATTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAA
* * *
1620473 AGCATCAATGTCATGTATCCTAATGAAGGGAAAATGATTTTGGTTCCCAATCTTTTAAAAAATGG
258 AGCATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTT-CCAATCTTTTAAAGAATGG
* * * * * ***
1620538 TGACTATTATGAGAATCGATGCTTGTCTTTTTTAAGTGATA-AACTTTGATTTTTTTTAAAATAG
322 AGACTGTTACGAGAATCAATGCTTGTCTTATTTAAG-GA-AGAACTTTGATTTTAAGTAAAATAG
* * * **
1620602 GGCAAAGAAAAGATTTCCAAGCAAAAGAAAATCATTAATATCATTTATCC----GCCG-G-A---
385 GGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGT
* * *
1620658 G-TTAGAATG--T-GTCACAAA
450 GTTTATAGTGCCTAATCACAAA
* * * *
1620676 ATGAATGAACATCATTACTAGAATCCATGTTTGTCTCTTTTAAGGCACGAACTTAGACTTTACAA
1 ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
* * *
1620741 AAATTGGTGGTAGAAATGCCTTTCTTGTGAAACCAAACCATCAATATCATGTATCCTAATGAGAA
66 AAATTGGTGG-A-AAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAA
* * * * * *
1620806 AACT-TGTTTATCGTGGCTAATCTTGAAAAGAATGAGGATTTGTATGACTACTAATGTTTGTCTT
129 GACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTA-TTATGTTTGTCTT
* *
1620870 GTTTAAGAGACAAACTTCGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAA
193 ATTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAA
* ** * * * *
1620935 AGCATCAGTGTCGCGTATCCTAATGAA-GGAAATGTATTTTTAGATTGCAATCTTTTAAAGAGTG
258 AGCATCAATGTCATGTATCCTAATGAAGGGAAA-GTGTTTTT-GGTTCCAATCTTTTAAAGAATG
* ** * ** *
1620999 GAGACTGTTACAAGAATTGATTCTTGTCTTATTTAAGGGGTGAACTTTGATTTTAAGAAAAATAG
321 GAGACTGTTACGAGAATCAATGCTTGTCTTATTTAA-GGAAGAACTTTGATTTTAAGTAAAATAG
** * * *
1621064 GGCAAAGAAAAGA-TTTCACACAAAAGAAAATCATCAATATCATTTATCCTGATAAGGAGAACGT
385 GGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGT
*
1621128 GTTTATAGTGCCTAGTCACAAA
450 GTTTATAGTGCCTAATCACAAA
* * * * *
1621150 ATGAATGAAGATCATTACTGGAACCTATGTTTATCTCATTTGAGGCATGAACTTAGACTTTGCAA
1 ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
* * * * * *
1621215 AATTTTGTGTGAAAAAAACCTTTCTTGCGAAACCAAGGCATCAATATCATGT-GCCATTATGAGA
66 AA-ATTG-GTGGAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC-TAATGAGA
* *
1621279 ATACTATGTTTATGG-GTCCTAATCTTGAAAAGTATGGGGATTAGTATGACTATTATTGTTTGTC
128 AGACTATGTTTATGGTG-CCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTC
* * * *
1621343 TTATTTGAGAGA-AAACTGTGATTCGATCACAAA-GCATGGAAAGAAAAGCTTTTCTTGCGACAC
191 TTATTTAAGAGACAAACTTTGATTCGATCAAAAACG-GTGGAAAGAAAAGCTTTTCTTGCGACAC
* *
1621406 CAAAGCATCAATGTCATGTATCCTAATGAAGGGTATGTGTTTTTGGTTCCTAATCTTTTAAAGAA
255 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTTCC-AATCTTTTAAAGAA
* * * * * * *
1621471 TCGAGACTATTACAAGAATTAATTCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAAT
319 TGGAGACTGTTACGAGAATCAATGCTTGTCTTATTTAA-GGAAGAACTTTGATTTTAAGTAAAAT
* * * * * *
1621536 AGGGTAAAGAGAAGATTTACATGCAAAAAAAAATCATCAATATCTTTTATCCTAATGAGAAGAAT
383 AGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
* * * *
1621601 -CGTTTATAGTGACTAATGACATA
448 GTGTTTATAGTGCCTAATCACAAA
* * * ** * * * * * * * * *
1621624 ATGCATGAAGATCTTTGCCGGAAACCATATTTGTATCATTGGAGGCACAAACTTATACTTAATAG
1 ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
* * * * **
1621689 AAAGTGGTGCAGAAAAAGCCTTTCTTGCGAAACCAAGGAATCAATATCATGTATTCTAACAAGAA
66 AAATTGGTG--GAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAA
* * *
1621754 GACTATGTTTATGGTGCCTAATCTTAAAAAGAATAGGGATTAGTATTACTATTGA-GATTTGTCT
129 GACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATG-TTTGTCT
* ** ** * *
1621818 TATATAAGACG-CAAACTTTGATTATATCAAAAATAGTGGAAGGAAAAGCTTTTCTTGTGACA-C
192 TATTTAAGA-GACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACC
* * * ** **
1621881 AAAACATCAATGTCAAGTATCCTAATGAAGGGAATGTGTTTTTCATTCCAATCTTGAAAAGAATG
256 AAAGCATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTTCCAATCTTTTAAAGAATG
* * * * * * * * * *
1621946 GAGACTATTACCAAAATTAGTGATTGTCTTATTTTAGGGAAGAACTTTGATTTCAAGGAAAATAA
321 GAGACTGTTACGAGAATCAATGCTTGTCTTA-TTTAAGGAAGAACTTTGATTTTAAGTAAAATAG
* * * * *
1622011 GGCAAAGAAAAGATTTTCATGTAAAAGAAAATCTTCAATACCACTTATCCTAATGAGGAGAATAT
385 GGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGT
* *
1622076 GTTTATAGCGCCTAATCACATA
450 GTTTATAGTGCCTAATCACAAA
** * * * * ** * *
1622098 ATGAATGAAGATCATTACCGGAACTCGTGTTTGTCTCATTTAAGGCATGAACTTAGACTCGATAG
1 ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
* ** * * * * ** *
1622163 AATTTGGTGGGAATAAAGATTTTCTTGCCAAACCAAGGCGTCAATATCGTGTATCCTTGTGAAAA
66 AAATTGGT-GGAA-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAA
* * *
1622228 AACTATGTTTATAGTGCCTAAT-TCTAAAAAGAATGGGGATTAGTATGACTATTATTGTTTGTCT
129 GACTATGTTTATGGTGCCTAATCT-TGAAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTCT
* * * *
1622292 TATTTAAGAGACAAACTTTAATTCGATAAAAAAAGGTGGAAAGAAAAGCTTTTCTTGTGACACCA
192 TATTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCA
* * *
1622357 AAGCATCGATGTCATGTATCCTAATGAAGGGAAAATGTTTTTGGTTCCCAACCTTTTAAAGAATG
257 AAGCATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTT-CCAATCTTTTAAAGAATG
* * ** * *
1622422 GTGACTGTTACGAGAATCGACACTTGTCTTCTTTAAGTGATA-AACTTTGATTTTAATTAAAATA
321 GAGACTGTTACGAGAATCAATGCTTGTCTTATTTAAG-GA-AGAACTTTGATTTTAAGTAAAATA
* * * * *
1622486 TGGTAAAGAAAAGATTTTTATGC-AAA-AAAATCATAAATATCATTTATCCTAAGGAGGAGAATG
384 GGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATG
* *
1622549 TTTTTATAATGCCTAATCA-AAA
449 TGTTTATAGTGCCTAATCACAAA
* * ** * * * * *
1622571 ATAAATAAAGATTTTTGCTAGAATCCATGTTTGTCTTATTT-AGGGCCCAAACTTAGACTTTACA
1 ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGA-GGCACGAACTTAGACTTTACA
* * * * * * * *
1622635 AAAATTGGTAGTAAAAGTGGCTGTCTTACGAAACCAAACCATTAATATCATGTATTCTAATGAGA
65 AAAATTGGT-GGAAAA-AGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA
* *** *
1622700 AGACTATCTTTGCAGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTATTGTTTGTCT
128 AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTCT
* * * * * *
1622765 TATTTAAGGGACAAACTTTGATTCGGTTAAGAACGATGGAAAGAAAAGCTTTTCTTGTGACACCA
192 TATTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCA
** * * *
1622830 AAGCATCGGTGTCATGTATCCTAAAGAAGGGAATA-TGATTTTGGTTTCAATCTTTTAAAGAATG
257 AAGCATCAATGTCATGTATCCTAATGAAGGGAA-AGTGTTTTTGGTTCCAATCTTTTAAAGAATG
* * * * * * * * *
1622894 GTGACCGTTATGGGAATCGATGCTTGTCTTATTTAAGG-GGTAAACTTTGATATCAATTAAAATA
321 GAGACTGTTACGAGAATCAATGCTTGTCTTATTTAAGGAAG--AACTTTGATTTTAAGTAAAATA
* * * * *
1622958 TGGTAAAGAAAAGATTTCCAAGCAAAAGAAAATCATCAATATCATTTATCCTAAGGAGGAGAA--
384 GGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATG
*
1623021 TG----T-GT--C----C-CATA
449 TGTTTATAGTGCCTAATCACAAA
*** * * *
1623032 ATGAGCAAAGATCATTAGTAGAATCCATGTTTGTCTCATTTGAGGCACAAACTTAGACTTTACAA
1 ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
* * * * *
1623097 AAATTGGCGGAAAAGATGCCTTCCTTGTGAAACCAAACCATCAATATCATGTTTCCTAATGAGAA
66 AAATTGGTGGAAAA-A-GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAA
* *
1623162 GACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACT-TAATGTTTGTCTTA
129 GACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATGTTTGTCTTA
* * * * *
1623226 TTGCAA-AGACAAACTTTGATTCGATCAAAAACAGTGGAAAAAAAAGCTTTTCTTGCGACACTAT
194 TT-TAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAA
** * * *
1623290 AGCATCAATGTCAACTATCCTAAAGAAGGGAAAATGTTTTTGGTTCCCAATCTTTTTAAGAATGG
258 AGCATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTT-CCAATCTTTTAAAGAATGG
** * * * * * *
1623355 TTACTATTATGAGAATCGATGCTTGTCTTAATGAAGGGATA-AACTTTGATTTTAATTAAAATAG
322 AGACTGTTACGAGAATCAATGCTTGTCTTATTTAA-GGA-AGAACTTTGATTTTAAGTAAAATAG
* * *
1623419 GGCAAAGAAAAG-TTTTCCATGCAAAAGAAAATCATCAAAATCATTTATCCTGATGAGGGGAATG
385 GGCAAAGAAAAGATTTT-CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATG
* *
1623483 TGTTTATGGTGCCAAATCACAAA
449 TGTTTATAGTGCCTAATCACAAA
* ** * * *
1623506 ATGAATGAAGATCATTAC-AAAATTCGTGTTTGTCTCATTTGAGGCATGAACATAGACTTTACAA
1 ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
* * * * *
1623570 AAATTGGTAGGAAAAGAGCCTTTCTT-CCAACGCCAAAGCATCAATATGATGTATCGTAAAGAGA
66 AAATTGGT-GGAAAA-AGCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATGAGA
* * * *
1623634 AGACTATGCTTATGGTGCATAATCCTGAAAAGAATGGGGATTTGTATGACTATTAATGTTTGTCT
128 AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATT-ATGTTTGTCT
* * *
1623699 TATTTAAGAGACAAACATTGATTCGATCAAAAACAGTGGAATGAAAAGCTTTTCTTGCGACACCA
192 TATTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCA
* * * * * ** * *
1623764 AAGGATCCATGTTATGTAT-CTCATGACGGGATTGTGTTTTTGGTTCCCAATCTTTTGAATAATG
257 AAGCATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTT-CCAATCTTTTAAAGAATG
* * * * *
1623828 GGGAC-GAATACGAGAATCAATGCTTGTCTTATTTAGGGGATGAACTTTGATTTTAAGAAAAATA
321 GAGACTG-TTACGAGAATCAATGCTTGTCTTATTTA-AGGAAGAACTTTGATTTTAAGTAAAATA
* * *
1623892 TGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGTGGAGAATG
384 GGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATG
*
1623957 TGTTTATAGTGCCTAATCACATA
449 TGTTTATAGTGCCTAATCACAAA
* * * *
1623980 ATGAAT-AATGATCATTACTATAACCCATGTTTGTCTCATTTGAAGCAGGAACTTAGACTTTGCA
1 ATGAATGAA-GATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACA
* * * * *
1624044 AAAATTAGTGCGAAGAAAGCCTTTTTTGTGAAACCAAGGCATCAAAATCATGTATCCCT-ATGAG
65 AAAATTGGTG-GAA-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTAT-CCTAATGAG
*** * *
1624108 AAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAAATGTATTAGTATGACTATTAT-TGTTATC
127 AAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATGT-TTGTC
* * ** * * *
1624172 TTATTTAAGAGATAAACTTTGATTCAATCAAAAACCATGAAAAGAAAAGCTTTTCCTACGACACC
191 TTATTTAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACC
* * * * *
1624237 ATAGCATCAATGTCATGTATCCTAATGAAGGTACTA-TGTTTTTTGTTCCCAATGTTTTAAAGAA
256 AAAGCATCAATGTCATGTATCCTAATGAAGGGA-AAGTGTTTTTGGTT-CCAATCTTTTAAAGAA
* * ** * * * *
1624301 TGGTGACTGTTATGAGAATTGATGCTAGTTTTATTTAAGGGATA-AACTTTGATTTAAATTAAAA
319 TGGAGACTGTTACGAGAATCAATGCTTGTCTTATTTAA-GGA-AGAACTTTGATTTTAAGTAAAA
* * * * *
1624365 AAGGCCAAAGAAAAGATTTCCATGCAGAAA-AAAATCATCAATATCATTTACCCTAAGGAGGAGA
382 TAGGGCAAAGAAAAGATTTTCATGCA-AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGA
*
1624429 ATATGTTTATAGTGCCTAATCACAAA
446 ATGTGTTTATAGTGCCTAATCACAAA
* * * * *
1624455 ATGAATAAAGATCATTACTAGAATCTACGTTTGTCTCATTTGAGGCACGGACTTAGACTTTACAA
1 ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
* ** * * ** * *
1624520 AAATTGATGGTAAAAAGGGTTTTCTTGCGAAGCTAATCCATTAATATCGTGTAAT-CTAATGAGA
66 AAATTGGTGG-AAAAA-GCCTTTCTTGCGAAACCAAAGCATCAATATCATGT-ATCCTAATGAGA
* * *
1624584 AGACTATATTTATGGTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTATTGTTTGTCC
128 AGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTA-TGTTTGTCT
* * * *
1624649 TATTTAAGAGACAAATTTTGATTCGATC-AAAACAGGTGCACAGAAAAGCTTTTCTTGCAACACC
192 TATTTAAGAGACAAACTTTGATTCGATCAAAAAC-GGTGGAAAGAAAAGCTTTTCTTGCGACACC
* ** * *
1624713 AAGGCATCAATAACATGTATCCTAATAAAGGGAAAATGTTTTTGGTTCCCAAT-TTGTTAAAGAA
256 AAAGCATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTT-CCAATCTT-TTAAAGAA
* * * * * * *
1624777 TGGTGATTGCTATGAGAATCAATCCATGT-TTGATTTAAGGGATA-AACTTTGATTTTAATTAAA
319 TGGAGACTGTTACGAGAATCAATGCTTGTCTT-ATTTAA-GGA-AGAACTTTGATTTTAAGTAAA
* * * * *
1624840 ATAGGGCAAAGAATAGATTTCCATGCAAAAGAAAATCATAAATATCATTCATCCTAATGAGAAGA
381 ATAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGA
*
1624905 ATGTGTTTATAGTGCCTAATCACGAA
446 ATGTGTTTATAGTGCCTAATCACAAA
* ** * *
1624931 ATGAATGAAGATCATTACTGGAACCCATGTTTGTCTTGTTTGAGGTACGAACTTAGACTTTGCAA
1 ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
** * * * * *
1624996 AAATTCTTGGGAAAAAAGCCTTTCTTGCGAAACCAAATCATCAATATGATGTATCTTAAGGGGAA
66 AAATTGGT-GG-AAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAA
* *
1625061 GACTATGTTTATGGTGCCTAATGGTGGAAAAGAATGGGGATTAGTATGAGC-ATTCATGTTTGTC
129 GACTATGTTTATGGTGCCTAAT-CTTGAAAAGAATGGGGATTAGTATGA-CTATT-ATGTTTGTC
* * * * * * *
1625125 TTAATTAAGAGGCAAACTTTGGTT-GTATCAAAAATGGTGGAAAGGAAAGTTTTTCTTGCGACAG
191 TTATTTAAGAGACAAACTTTGATTCG-ATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACAC
* * * * * **
1625189 CAAAGCATCAATGTCTTGTATCATAATAAAGGGAATGTGTTTTTGGTTCTTAATCTTGAAAAGAA
255 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTTC-CAATCTTTTAAAGAA
* *
1625254 TGGAGACTGTTACGAGAATCAATGCTTGTCTTATTTAAGGGACGAACTTTGATTTCAAGTAAAAT
319 TGGAGACTGTTACGAGAATCAATGCTTGTCTTATTTAA-GGAAGAACTTTGATTTTAAGTAAAAT
* * *
1625319 AGGGCAAAGAAAAGATTTTAATGCAAAAGAAAATCGTCAATATCGTTTATCCTAATGAGGAGAAT
383 AGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
1625384 GTGTTTATAGTGCCTAATCACAAA
448 GTGTTTATAGTGCCTAATCACAAA
* * * * *
1625408 ATGAGTGAAGATCAAT-CATAGAATCCACGTTTATCTCATTTGAGGCACGAACTTAGACTTTACA
1 ATGAATGAAGATCATTAC-TAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACA
* * * *
1625472 AAAATTGGTGGGAAAATGCCTTTCTTGCGAAAGCAAAACATCAATATCATGTATCCTAATGAAAA
65 AAAATTGGT-GGAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAA
1625537 GACTATGTTTATGG
129 GACTATGTTTATGG
1625551 CCCCAATCAT
Statistics
Matches: 4833, Mismatches: 837, Indels: 285
0.81 0.14 0.05
Matches are distributed among these distances:
458 1 0.00
459 102 0.02
460 127 0.03
461 189 0.04
462 218 0.05
463 122 0.03
464 2 0.00
465 2 0.00
466 7 0.00
467 5 0.00
468 1 0.00
469 1 0.00
470 2 0.00
471 8 0.00
472 97 0.02
473 516 0.11
474 1210 0.25
475 1267 0.26
476 613 0.13
477 333 0.07
478 10 0.00
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.32
Consensus pattern (471 bp):
ATGAATGAAGATCATTACTAGAACCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAA
AAATTGGTGGAAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGA
CTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTATGTTTGTCTTATT
TAAGAGACAAACTTTGATTCGATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGC
ATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTTCCAATCTTTTAAAGAATGGAGAC
TGTTACGAGAATCAATGCTTGTCTTATTTAAGGAAGAACTTTGATTTTAAGTAAAATAGGGCAAA
GAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTAT
AGTGCCTAATCACAAA
Found at i:1626439 original size:16 final size:16
Alignment explanation
Indices: 1626420--1626454 Score: 52
Period size: 16 Copynumber: 2.2 Consensus size: 16
1626410 TGATTCGATC
1626420 AAAAATGGTGGAAAGA
1 AAAAATGGTGGAAAGA
* *
1626436 AAAACTTGTGGAAAGA
1 AAAAATGGTGGAAAGA
1626452 AAA
1 AAA
1626455 GCTTGTCTTG
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
16 17 1.00
ACGTcount: A:0.57, C:0.03, G:0.26, T:0.14
Consensus pattern (16 bp):
AAAAATGGTGGAAAGA
Found at i:1626459 original size:16 final size:16
Alignment explanation
Indices: 1626427--1626460 Score: 59
Period size: 16 Copynumber: 2.1 Consensus size: 16
1626417 ATCAAAAATG
1626427 GTGGAAAGAAAAACTT
1 GTGGAAAGAAAAACTT
*
1626443 GTGGAAAGAAAAGCTT
1 GTGGAAAGAAAAACTT
1626459 GT
1 GT
1626461 CTTGTGACAC
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
16 17 1.00
ACGTcount: A:0.44, C:0.06, G:0.29, T:0.21
Consensus pattern (16 bp):
GTGGAAAGAAAAACTT
Found at i:1629799 original size:13 final size:13
Alignment explanation
Indices: 1629781--1629829 Score: 56
Period size: 13 Copynumber: 4.2 Consensus size: 13
1629771 TACATGTACC
1629781 TTGTATCGATACA
1 TTGTATCGATACA
1629794 TTGTATCGATACA
1 TTGTATCGATACA
1629807 -TG-AT-GAT---
1 TTGTATCGATACA
1629814 TTGTATCGATACA
1 TTGTATCGATACA
1629827 TTG
1 TTG
1629830 CTTCTAACGG
Statistics
Matches: 30, Mismatches: 0, Indels: 12
0.71 0.00 0.29
Matches are distributed among these distances:
8 2 0.07
9 2 0.07
10 6 0.20
11 2 0.07
12 2 0.07
13 16 0.53
ACGTcount: A:0.29, C:0.12, G:0.18, T:0.41
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:1635222 original size:42 final size:42
Alignment explanation
Indices: 1635167--1635285 Score: 193
Period size: 42 Copynumber: 2.8 Consensus size: 42
1635157 TTCTTCTCTC
* *
1635167 CTCCTCCTGTCATCCCTCCTCTCTCTATTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
*
1635209 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
* *
1635251 CTCCTCCTATCATCCCTCCTCTCTCTTCTTTCTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCT
1635286 TTGAGGGCTA
Statistics
Matches: 71, Mismatches: 6, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
42 71 1.00
ACGTcount: A:0.08, C:0.46, G:0.03, T:0.43
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
Found at i:1635226 original size:12 final size:11
Alignment explanation
Indices: 1635200--1635275 Score: 52
Period size: 12 Copynumber: 6.9 Consensus size: 11
1635190 TCTATTATCT
*
1635200 CTCCTGTCTCTC
1 CTCCTATCTC-C
1635212 CTCCTATCATCC
1 CTCCTATC-TCC
1635224 CTCCTATCT--
1 CTCCTATCTCC
*
1635233 CTACTATCT--
1 CTCCTATCTCC
*
1635242 CTCCTGTCTCTC
1 CTCCTATCTC-C
1635254 CTCCTATCATCC
1 CTCCTATC-TCC
*
1635266 CTCCTCTCTC
1 CTCCTATCTC
1635276 TTCTTTCTCT
Statistics
Matches: 53, Mismatches: 6, Indels: 11
0.76 0.09 0.16
Matches are distributed among these distances:
9 15 0.28
11 3 0.06
12 31 0.58
13 4 0.08
ACGTcount: A:0.09, C:0.49, G:0.03, T:0.39
Consensus pattern (11 bp):
CTCCTATCTCC
Found at i:1635227 original size:24 final size:24
Alignment explanation
Indices: 1635191--1635276 Score: 85
Period size: 24 Copynumber: 3.8 Consensus size: 24
1635181 CCTCCTCTCT
* *
1635191 CTATTATCTCTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
* *
1635215 CTATCATCCCTCC--TATCT-CTA
1 CTATCATCCCTCCTGTCTCTCCTC
1635236 CTATC-T--CTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
*
1635257 CTATCATCCCTCCTCTCTCT
1 CTATCATCCCTCCTGTCTCT
1635277 TCTTTCTCTT
Statistics
Matches: 49, Mismatches: 7, Indels: 12
0.72 0.10 0.18
Matches are distributed among these distances:
18 4 0.08
20 5 0.10
21 14 0.29
22 5 0.10
24 21 0.43
ACGTcount: A:0.10, C:0.45, G:0.02, T:0.42
Consensus pattern (24 bp):
CTATCATCCCTCCTGTCTCTCCTC
Found at i:1635251 original size:18 final size:18
Alignment explanation
Indices: 1635182--1635252 Score: 52
Period size: 18 Copynumber: 3.6 Consensus size: 18
1635172 CCTGTCATCC
* *
1635182 CTCCTCTCTCTATTATCT
1 CTCCTGTCTCTACTATCT
*
1635200 CTCCTGTCTCTCCTCCTATCAT
1 CTCCTG--TCT-CTACTATC-T
*
1635222 CCCTCCTATCTCTACTATCT
1 --CTCCTGTCTCTACTATCT
1635242 CTCCTGTCTCT
1 CTCCTGTCTCT
1635253 CCTCCTATCA
Statistics
Matches: 41, Mismatches: 6, Indels: 12
0.69 0.10 0.20
Matches are distributed among these distances:
18 15 0.37
20 4 0.10
21 13 0.32
22 4 0.10
24 5 0.12
ACGTcount: A:0.10, C:0.44, G:0.03, T:0.44
Consensus pattern (18 bp):
CTCCTGTCTCTACTATCT
Done.