Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold2740
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 449113
ACGTcount: A:0.34, C:0.16, G:0.19, T:0.31
File 1 of 2
Found at i:3046 original size:13 final size:13
Alignment explanation
Indices: 3026--3063 Score: 58
Period size: 13 Copynumber: 2.9 Consensus size: 13
3016 CAGCATTCTT
*
3026 TGTATCGATACAT
1 TGTATCGATACAC
*
3039 TTTATCGATACAC
1 TGTATCGATACAC
3052 TGTATCGATACA
1 TGTATCGATACA
3064 GGGGGATTAT
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
13 22 1.00
ACGTcount: A:0.32, C:0.18, G:0.13, T:0.37
Consensus pattern (13 bp):
TGTATCGATACAC
Found at i:5358 original size:20 final size:20
Alignment explanation
Indices: 5333--5382 Score: 64
Period size: 20 Copynumber: 2.5 Consensus size: 20
5323 ACCCTAAAAA
*
5333 GTATCGATACACATTTAATT
1 GTATCGATACACATTGAATT
** *
5353 GTATCGATACATGTTGCATT
1 GTATCGATACACATTGAATT
5373 GTATCGATAC
1 GTATCGATAC
5383 TTGAAAAAGA
Statistics
Matches: 26, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
20 26 1.00
ACGTcount: A:0.30, C:0.16, G:0.16, T:0.38
Consensus pattern (20 bp):
GTATCGATACACATTGAATT
Found at i:5474 original size:13 final size:13
Alignment explanation
Indices: 5456--5480 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
5446 ACACATAGTA
5456 TGTATCGATACAT
1 TGTATCGATACAT
5469 TGTATCGATACA
1 TGTATCGATACA
5481 CCATAAAATG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:5477 original size:32 final size:33
Alignment explanation
Indices: 5436--5503 Score: 111
Period size: 33 Copynumber: 2.1 Consensus size: 33
5426 GTAGCTAAAC
**
5436 TTGTATCGATACA-CATAGTATGTATCGATACA
1 TTGTATCGATACACCATAAAATGTATCGATACA
5468 TTGTATCGATACACCATAAAATGTATCGATACA
1 TTGTATCGATACACCATAAAATGTATCGATACA
5501 TTG
1 TTG
5504 GCTTCTAATG
Statistics
Matches: 33, Mismatches: 2, Indels: 1
0.92 0.06 0.03
Matches are distributed among these distances:
32 13 0.39
33 20 0.61
ACGTcount: A:0.35, C:0.16, G:0.15, T:0.34
Consensus pattern (33 bp):
TTGTATCGATACACCATAAAATGTATCGATACA
Found at i:7679 original size:651 final size:651
Alignment explanation
Indices: 6386--7689 Score: 1429
Period size: 651 Copynumber: 2.0 Consensus size: 651
6376 AAGAATCAAT
* *
6386 GCTTACCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAAGAAACATTTCCATG
1 GCTTACCTTATTTAAGCGATGAACTTTAATTTTAAGGAAAATAGGGCAAAAGAAACATTTCCATG
* **
6451 CAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACAA
66 CAAAATAAAATCATCAATATCATTTATCCTAATGACGAGAATGTGTTTACAGTGCCTAATCACAA
* * * * * *
6516 AATGGATGAAGATCACTACTAGAATCCATGTTTCACTCATTTGAGGCACAAACTTACACTTTACT
131 AATGAATAAAGATCAATACTAGAATCCATGTTTCACTCATTTGAGGCACAAACCTACACTATACA
* * *
6581 AAAATTGGTGGGAAAACAGCCTTTCTTGGGAAACCAAAGCATCAATATCGTGTATCCTTGTGAGA
196 AAAATTGGTGGGAAAACAGCCTTTCGTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGA
* * * *
6646 AAACTATGTTTACGTTGCTAGATCCTGAAAAAGAATGGGGATTAGAATGACTATTCATGTTTGTC
261 AAACTATGTTTACGGTGCTAGATCATGAAAAAGAATGGGGACTAGAATAACTATTCATGTTTGTC
** * * * *
6711 CTATTTAAGAGACAAACTTGTATTATAGCAAAAACGGTTGAAATAAAAGCTTTTTTTGCGACCCC
326 CTATTTAAGAGACAAACTTGTATTATAGCAAAAACAATGGAAATAAAAGCTTTTCTTACGACACC
* * *
6776 AAAGCATCAATGTTAGGTATCCTATTGAAGGGAATGTGTTTTTAGTTCCCAATCTTGAAAAGAAT
391 AAAGCATCAATGTCACGTATCCTAATGAAGGGAATGTGTTTTTAGTTCCCAATCTTGAAAAGAAT
* * * *
6841 GGAGACTGTTACAAGAATCCACGTTTGACTTATTTGAGTCACAAACTTACACTTTATAAAAATTG
456 GGAGACTGTTACAAGAATCCACGCTGGACATATTTGAGGCACAAACTTACACTTTATAAAAATTG
* * * * * ** ** * *
6906 CTAGGAAAAAGGCCTTTCTTGCGAAACCCAACCATCAATATCATCTATCCTTGTGAGAAGACTGC
521 CAAAGAAAAAGGACTTTCATGCAAAACAAAACCATCAATATCATCTATCCTAATAAGAAGAATGC
** * ** * ** * *
6971 GTGTATAGCACCTAATCTTGAAAAGACTGGGGATTAGTATCACTGTTCAAGTTTGACTTAATTAA
586 GTGTATAGCACCTAATCTACAAAAGAATGAAGATCAGTATCACAATCCAAGTTTGACTCAATTAA
7036 G
651 G
* * *
7037 GCTTGCCTTATTTAAGCGATGAACTTTAATTTTAAGGAAAATAGGGCGAAAA-AAAGATTTTCAT
1 GCTTACCTTATTTAAGCGATGAACTTTAATTTTAAGGAAAATAGGGC-AAAAGAAACATTTCCAT
* *
7101 GTAAACA-AAAATCATCAATATCATTTATCCTAATGACGAGAATGTGTTTACAGTGTCTAATCAC
65 GCAAA-ATAAAATCATCAATATCATTTATCCTAATGACGAGAATGTGTTTACAGTGCCTAATCAC
* ** * * *
7165 AAAATGAATAAAGATCAATAGTAGAATCCATGTTTGTCTC-TATTGAGGCGCGAACCTAGACTAT
129 AAAATGAATAAAGATCAATACTAGAATCCATGTTTCACTCAT-TTGAGGCACAAACCTACACTAT
* *
7229 ACAAAAATTGGTGGGAGGAA-AGCCTTTCGTGCGAAACCAAATCATCAATATCGTGTATCCTTAT
193 ACAAAAATTGGTGGGA-AAACAGCCTTTCGTGCGAAACCAAAGCATCAATATCGTGTATCCTTAT
* **
7293 GA-AAAGACTATGTTTATGGTGCCTA-ATCATG-AAAAGAATGGGGACTAGTTTAACTATTCATG
257 GAGAAA-ACTATGTTTACGGTG-CTAGATCATGAAAAAGAATGGGGACTAGAATAACTATTCATG
* * *
7355 TTTGTCTTATTTAAGAGACAAACTT-TGATTATATCAAAAATAATGGAACA-AAAAGCTTTTCTT
320 TTTGTCCTATTTAAGAGACAAACTTGT-ATTATAGCAAAAACAATGGAA-ATAAAAGCTTTTCTT
* * * * *
7418 ATGACACCAAAGCATCAATGTCACGTATCCTAATGAATGGATTGT-TTTCTTGGTTCTCAATCTT
383 ACGACACCAAAGCATCAATGTCACGTATCCTAATGAAGGGAATGTGTTT-TTAGTTCCCAATCTT
* * * * * ** * **
7482 GAAAAGAGTGGAGACTGTTACAAGAATCGATGCTGGTCATATTT-AGGGGATGAATTTTGA-TTT
447 GAAAAGAATGGAGACTGTTACAAGAATCCACGCTGGACATATTTGA-GGCACAAACTTACACTTT
* * *
7545 -TAAGGAATATTGGGCAAAG-AAAA-GATTTTCATGCAAAAGAAAATCATCAATATCAT-TAATC
511 ATAA--AA-ATT--GCAAAGAAAAAGGACTTTCATGCAAAACAAAACCATCAATATCATCT-ATC
* * * * ** * * *
7606 CTAATAAGGAGAATGTGTTTATTGTGCCTAATC-ACAAAATGAATGAAGATCATTATTAGAATCC
570 CTAATAAGAAGAATGCGTGTATAGCACCTAATCTACAAAA-GAATGAAGATCAGTATCACAATCC
*
7670 ACA-TTTGACTCATTTAAG
634 A-AGTTTGACTCAATTAAG
7688 GC
1 GC
7690 ACGAACCTAC
Statistics
Matches: 536, Mismatches: 99, Indels: 36
0.80 0.15 0.05
Matches are distributed among these distances:
648 3 0.01
649 8 0.01
650 184 0.34
651 322 0.60
652 15 0.03
653 4 0.01
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (651 bp):
GCTTACCTTATTTAAGCGATGAACTTTAATTTTAAGGAAAATAGGGCAAAAGAAACATTTCCATG
CAAAATAAAATCATCAATATCATTTATCCTAATGACGAGAATGTGTTTACAGTGCCTAATCACAA
AATGAATAAAGATCAATACTAGAATCCATGTTTCACTCATTTGAGGCACAAACCTACACTATACA
AAAATTGGTGGGAAAACAGCCTTTCGTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGA
AAACTATGTTTACGGTGCTAGATCATGAAAAAGAATGGGGACTAGAATAACTATTCATGTTTGTC
CTATTTAAGAGACAAACTTGTATTATAGCAAAAACAATGGAAATAAAAGCTTTTCTTACGACACC
AAAGCATCAATGTCACGTATCCTAATGAAGGGAATGTGTTTTTAGTTCCCAATCTTGAAAAGAAT
GGAGACTGTTACAAGAATCCACGCTGGACATATTTGAGGCACAAACTTACACTTTATAAAAATTG
CAAAGAAAAAGGACTTTCATGCAAAACAAAACCATCAATATCATCTATCCTAATAAGAAGAATGC
GTGTATAGCACCTAATCTACAAAAGAATGAAGATCAGTATCACAATCCAAGTTTGACTCAATTAA
G
Found at i:8095 original size:477 final size:475
Alignment explanation
Indices: 7043--8128 Score: 1392
Period size: 476 Copynumber: 2.3 Consensus size: 475
7033 TAAGGCTTGC
* * *
7043 CTTATTTAAGCGATGAACTTTAATTTTAAGGAAAATAGGGCGAAA-AAAAGATTTTCATGTAAAC
1 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGC-AAAGAAAAGATTTTCATGCAAA-
* ** *
7107 AAAAATCATCAATATCATTTATCCTAATGACGAGAATGTGTTTACAGTGTCTAATCACAAAATGA
64 AAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGA
* ** * * * *
7172 ATAAAGATCAATAGTAGAATCCATGTTTGTCTCTATTGAGGCGCGAACCTAGACTATACAAAAAT
129 ATGAAGATCAATAGTAGAATCCACATTTGACTCTATTAAGGCACGAACCTACACTATACAAAAAT
* ** * * * *
7237 TGGTGGGAGGAAAGCCTTTCGTGCGAAACCAAATCATCAATATCGTGTATCCTTATGAAAAGACT
194 TAGTGGGAACAAAGCCTTTCGTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAAAAAACT
* ** * *
7302 ATGTTTATGGTGCCTAATCATGAAAAGAATGGGGACTAGTTTAACTATTCATGTTTGTCTTATTT
259 ATGTTTATGGGGCCTAATCATGAAAAGAATGGGGACTAGCATAACTATTCAAGTTTGACTTATTT
* * * *
7367 AAGAGACAAACTTTGATTATATCAAAAATAATGGAACAAAAAGCTTTTCTTATGACACCAAAGCA
324 AAGAGACAAACTTTGACTATAGCAAAAACAATCGAACAAAAAGCTTTTCTTATGACACCAAAGCA
* * * * * * *
7432 TCAATGTCACGTATCCTAATGAATGGATTGTTTTCTTGGTTCTCAATCTTGAAAAGAGTGGAGAC
389 TCAATGTCACGAATCCTAATGAAGGGAATGATTTCTTGGTACCCAATCTTGAAAAGAATGGAGAC
* *
7497 TGTTACAAGAATCGATGCTGGT
454 TGTTACAAGAATCAATGCTGAT
* * * * *
7519 CATATTTAGGGGATGAATTTTGATTTTAAGGAATATTGGGCAAAGAAAAGATTTTCATGCAAAAG
1 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCAAAA-
* *
7584 AAAATCATCAATATCATTAATCCTAATAAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAA
65 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAA
* * *
7649 TGAAGATCATTATTAGAATCCACATTTGACTC-ATTTAAGGCACGAACCTACACTTTACAAAAAT
130 TGAAGATCAATAGTAGAATCCACATTTGACTCTA-TTAAGGCACGAACCTACACTATACAAAAAT
* * *
7713 TAGTGGGAACAAAGCTTTTCTTGTGAAACCAAAGCATCAATATCGTCTATCCTAAT-AACAAAAC
194 TAGTGGGAACAAAGCCTTTCGTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAA-AAAAC
* * * * *
7777 TATGTTTATGGGGCCTAATCCTGAAAAGAATGGGGATTAGCATGATTGTTCAAGTTTGACTTATT
258 TATGTTTATGGGGCCTAATCATGAAAAGAATGGGGACTAGCATAACTATTCAAGTTTGACTTATT
* * * **
7842 TAAGAGAGTAAACTTTGACTCTAGCAGAAACGGTCGAA-AGAAAAGCTTTTCTTGA-GACACCAA
323 TAAGAGA-CAAACTTTGACTATAGCAAAAACAATCGAACA-AAAAGCTTTTCTT-ATGACACCAA
* * *
7905 AGCATCAATGTTATGAATCCTAATGAAGGGAATGCATTT-TTGGTACCCAATCTTGGAAAGAATG
385 AGCATCAATGTCACGAATCCTAATGAAGGGAATG-ATTTCTTGGTACCCAATCTTGAAAAGAATG
*
7969 GAGACTGTTACAAGAATCAATGCTTAT
449 GAGACTGTTACAAGAATCAATGCTGAT
* * *
7996 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAT
1 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCAAAA-
* * *
8061 AAAATCATCAATATCATTTATCCCAATGAGGAGAATGTGTTTATTGTGCCTAATCCCAAAATGGA
65 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAA
8126 TGA
130 TGA
8129 GAATACAACC
Statistics
Matches: 522, Mismatches: 80, Indels: 15
0.85 0.13 0.02
Matches are distributed among these distances:
475 7 0.01
476 276 0.53
477 235 0.45
478 4 0.01
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.30
Consensus pattern (475 bp):
CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCAAAAA
AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAAT
GAAGATCAATAGTAGAATCCACATTTGACTCTATTAAGGCACGAACCTACACTATACAAAAATTA
GTGGGAACAAAGCCTTTCGTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAAAAAACTAT
GTTTATGGGGCCTAATCATGAAAAGAATGGGGACTAGCATAACTATTCAAGTTTGACTTATTTAA
GAGACAAACTTTGACTATAGCAAAAACAATCGAACAAAAAGCTTTTCTTATGACACCAAAGCATC
AATGTCACGAATCCTAATGAAGGGAATGATTTCTTGGTACCCAATCTTGAAAAGAATGGAGACTG
TTACAAGAATCAATGCTGAT
Found at i:8489 original size:410 final size:410
Alignment explanation
Indices: 7729--8538 Score: 1126
Period size: 410 Copynumber: 2.0 Consensus size: 410
7719 GAACAAAGCT
* * **
7729 TTTCTTGTGAAACCAAAGCATCAATATCGTCTATCCTAATAACAAAACTATGTTTATGGGGCCTA
1 TTTCTTGGGAAACCAAAGCATCAATATCATCTATCCTAATAACAAAACTATGTTTACCGGGCCTA
* * * * * *
7794 ATCCTGAAAAGAATGGGGATTAGCATGATTGTTCAAGTTTGACTTATTTAAGAGAGTAAACTTTG
66 ATCCTGAAAAGAATGGGGATTAGAATGACTATTCAAGTTTGACCTATTTAAAAGAGCAAACTTTG
* * *
7859 ACTCTAGCAGAAACGGTCGAAAGAAAAGCTTTTCTTGAGACACCAAAGCATCAATGTTATGAATC
131 ACTATAGCAAAAACGGTCGAAAGAAAAGCTTTTCTTGAGACACCAAAGCATCAATGTTAGGAATC
* *
7924 CTAATGAAGGGAATGCATTTTTGGTACCCAATCTTGGAAAGAATGGAGACTGTTACAAGAATCAA
196 CTAATGAAGGGAATGCATTTTTCGTACCCAATCTTGAAAAGAATGGAGACTGTTACAAGAATCAA
* *
7989 TGCTTATCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAT
261 TGCTTACCTTATTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAT
* * *
8054 GCAAAATAAAATCATCAATATCATTTATCCCAATGAGGAGAATGTGTTTATTGTGCCTAATCCCA
326 GCAAAATAAAATCATCAATATCATTTATCCCAATGAGGAGAATGTGGTTATTATGCCTAATCACA
*
8119 AAATGGATGAGAATACAACC
391 AAATGAATGAGAATACAACC
* * * * * * **
8139 TTTCTTGGGAAACCAAAGCGTCAATATCATGTATCCTTATGAGAATACTATGTTTACCTTG-CTA
1 TTTCTTGGGAAACCAAAGCATCAATATCATCTATCCTAATAACAAAACTATGTTTACCGGGCCT-
* **
8203 AATCCTGAAAAAGAATGGGGATTAGAATGACTATTCATGTTTTTCCTATTTAAAAGA-CAAA-TT
65 AATCCTG-AAAAGAATGGGGATTAGAATGACTATTCAAGTTTGACCTATTTAAAAGAGCAAACTT
* * * * * *
8266 TGTATTATAGCAAAAATGGTTGAAATAAAAGCTTTTCTT-ACGACCCCAAAGCATCAAT-TTCGG
129 TG-ACTATAGCAAAAACGGTCGAAAGAAAAGCTTTTCTTGA-GACACCAAAGCATCAATGTT-AG
* ** * *
8329 GTATCCTAATGAAGGGAATGTGTTTTTCGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGA
191 GAATCCTAATGAAGGGAATGCATTTTTCGTACCCAATCTTGAAAAGAATGGAGACTGTTACAAGA
* *
8394 ATCAATGCTTGCCTTATTTAAGGGATGAACTTTAATTTTAAGGAAAATCGGGCAAAGGAAACATT
256 ATCAATGCTTACCTTATTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGGAAACATT
*
8459 TCCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGGTTATTATGCCTAA
321 TCCATGCAAAATAAAATCATCAATATCATTTATCCCAATGAGGAGAATGTGGTTATTATGCCTAA
8524 TCACAAAATGAATGA
386 TCACAAAATGAATGA
8539 AGATCATTAC
Statistics
Matches: 349, Mismatches: 46, Indels: 10
0.86 0.11 0.02
Matches are distributed among these distances:
409 9 0.03
410 299 0.86
411 41 0.12
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.30
Consensus pattern (410 bp):
TTTCTTGGGAAACCAAAGCATCAATATCATCTATCCTAATAACAAAACTATGTTTACCGGGCCTA
ATCCTGAAAAGAATGGGGATTAGAATGACTATTCAAGTTTGACCTATTTAAAAGAGCAAACTTTG
ACTATAGCAAAAACGGTCGAAAGAAAAGCTTTTCTTGAGACACCAAAGCATCAATGTTAGGAATC
CTAATGAAGGGAATGCATTTTTCGTACCCAATCTTGAAAAGAATGGAGACTGTTACAAGAATCAA
TGCTTACCTTATTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAT
GCAAAATAAAATCATCAATATCATTTATCCCAATGAGGAGAATGTGGTTATTATGCCTAATCACA
AAATGAATGAGAATACAACC
Found at i:9673 original size:477 final size:475
Alignment explanation
Indices: 8137--31081 Score: 26069
Period size: 477 Copynumber: 48.2 Consensus size: 475
8127 GAGAATACAA
* * * * ***
8137 CCTTTCTTGGGAAACCAAAGCGTCAATATCATGTATCCTTATGAGAATACTATGTTTACCTTG-C
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * ** * *
8201 TAAATCCTGAAAAAGAATGGGGATTAGAATGACTATTCATGTTTTTCCTATTTAAAAGACAAA-T
66 T-AATCCTG-AAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACT
* * * * * * * * * **
8265 TTGTATTATAGCAAAAATGGTTGAAATAAAAGCTTTTCTTACGACCCCAAAGCATCAATTTCGGG
129 TTG-ATTCTATCAAAAA-CGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* *
8330 TATCCTAATGAAGGGAATGTGTTTTTCGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
192 TATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
* * * * * *
8395 TCAATGCTTGCCTTATTTAAGGGATGAACTTTAATTTTAAGGAAAATCGGGCAAAGGAAACATTT
257 TCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
* * *
8460 CCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGGTTATTATGCCTAAT
322 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
* *
8525 CACAAAATGAATGAAGATCATTACCAGAATCCATGTTTGACTCATTTGAGGCACGGACTTACACT
387 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACT
8590 TTACAAAAATTGGTGGGAAGAAAG
452 TTACAAAAATTGGTGGGAAGAAAG
* * * * * * *
8614 CCTTTCTTGAGAAACCAAACCATCAATATAGTCTATCC-TAGCGAGAAGACTATGTTTATAGCGC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTA-TGAGAAGACTATGTTTATGGTGC
* *
8678 CTAATCTTGAAAAGAATGGGGATTAGTATCACTGA-TCAAGTTTGACTTATTTAA-AGGAGCAAA
65 CTAATCCTGAAAAGAATGGGGATTAGTATGACT-ATTCAAGTTTGACTTATTTAAGA-GA-CAAA
* * * * **
8741 CTTTGATTTTATGAAAAA-TAGTGGTAAGAAAACCTTTTCTTGCGACACCAAAATATCAATGTCA
127 CTTTGATTCTATCAAAAACGA-TGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
* * ** * **
8805 TGTATCCTAATGAAGGGAATGTGGTT-TCGGATGTCAATCTTGAAAAGAATGGAGACTGCTGTGA
190 TGTATCCTAATGAAGGGAATGT-GTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGA
* * * * * *
8869 GAATTAAGGCTTGCCTTATTTAAGCGAT-AACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGA
254 GAATCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGA
* * * * **
8933 TTTTCATGCAAAA-AAAACCGTCAATATCATTTATTCTAATGAGGAGAATGTGTTTACAGTGCCT
319 TTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCT
* * * * * * * *
8997 CATCACAAAATGAATAAAGATCAATACTAGAATCCATTTTTGTCTC-TATTGAGGCGCAAACCTA
384 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT-TTGAGGCACGAACTTA
* * * *
9061 GACTATACAAAATTTGGTGGGAGGAAAG
448 CACTTTACAAAAATTGGTGGGAAGAAAG
* * * * *
9089 CCTTTCGTGCAAAAACCAAAGCGTCAATATCGTGTATCCTTATTAAAAGACTATGTTTATGGTGC
1 CCTTTCTTGC-GAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGC
* * * *
9154 CTAATCCTGAAAAGAATGGCGATTAGTTTGACTATTCATGTTTGTCTTATTTAAGAGACAAACTT
65 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTT
** * *
9219 TGATTCTATCAAAAACGATGGAATGAAAAGCTTTTCTTATGACACAAAAGCATTAATGTCATGTA
130 TGATTCTATCAAAAACGATGGAA-GAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
* * * * * * * *
9284 TTCTAATGAATGGATTGTGTTCTTGGTTCTCAATCATGAAAAGAATGGAGACTATTACAAGAATT
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
* * * * * *
9349 GATGCTGGTCATATTTAAGGGATGAATTTTGATTTTAAGGAATATTGGGCAAAGAAAAGATTTTC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
9414 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCA
324 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCA
* *
9479 CAAAAT-AGATGAAAATCATTACTAGAATCCATGTTTCACTCATTTGAGGCACGAACTTACACTT
389 CAAAATGA-ATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTT
*
9543 TACGAAAATTGGTGGGAA-AATAG
453 TACAAAAATTGGTGGGAAGAA-AG
* * * * * * *
9566 CCTTTCTTGGGAAACCAAAGCGTCAATATCATGTATCCTTACGAGAATACTATGTTTACGTTG-C
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * * *
9630 TAAATCCTGAAAAAAAATAGGGATTAGAATGACTATTCATGTTTGTCCTATTTAAGAGACAAAC-
66 T-AATCCTG-AAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACT
* * * * ** * *
9694 TTGTATTATAGCAAAAATGGTTAAAATAAAAGCTTTTCTTGCGAC-CCTAAAGCATCAATGTCAG
129 TTG-ATTCTATCAAAAA-CGATGGAAGAAAAGCTTTTCTTGCGACACC-AAAGCATCAATGTCAT
* * *
9758 GTATCCTAATGAAGGAAATGTGTTTTTGGTTCCCAATCTTGAAAAGAGTGGAGACTGTTACGAGA
191 GTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGA
* ** * * * * * *
9823 ATTAATGCTTACCTTATTTAAGGGATGAACTTTAATTTTAAGAAAAATCGGGCAAA-AGTAACAT
256 ATCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA-AAAGAT
* ** *
9887 TTCCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGCATTTGTTGTGCCTA
320 TTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTA
* * **
9952 ATCACAGAATCAATGAAGATCATTACTAGAATCCGCGTTTGACTCATTTGAGGCACGAACTTACA
385 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACA
* * *
10017 CTTTACAAAAGTTGCTAGGAAGAAAG
450 CTTTACAAAAATTGGTGGGAAGAAAG
* * * * ** * *
10043 CCTTTCTTGC-AAAGCCAAACCATCAATATCATCTAT-CATA-GCAAGAAGACTGCGTTTATAGC
1 CCTTTCTTGCGAAA-CCAAAGCATCAATATCGTGTATCCTTATG--AGAAGACTATGTTTATGGT
* * * * * * * *
10105 GCCTAATCTTGAAAAGATTGGGGATTAGTATCACTGTTCAAGTTTGATTTATTTTAGGGAGTAAA
63 GCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAA
* * * * *
10170 CTTTGATTCTATGAAAAA-TAGTGGTAAGAAAAGCTTTTCTTGCCACACCAAAACATCAATGTCT
127 CTTTGATTCTATCAAAAACGA-TGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
10234 TGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAG
190 TGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAG
* * * * * *
10299 AATCGAGGCTTGTCATACTTT-AGTGATGAATTTTCATTTTAAGGAAAATAAGGCAAAGAAAAGA
255 AATCAATGCTTGTCATA-TTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGA
* * **
10363 TTTTCATGCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAGAATGTGTTTACAGTGCCT
319 TTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCT
* * * *
10428 AATCACAAAATGATTGAAGATCATTGCTAGAATCCATGTTTGTCTC-TATTGAGGCACGAACCTA
384 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT-TTGAGGCACGAACTTA
* * * *
10492 GACTATAAAAAAATTGGCGGGAAGAAAG
448 CACTTTACAAAAATTGGTGGGAAGAAAG
* ** *
10520 CCTTTCGTGCGAAACCAAAGCATCGGTATCGTGTATCCTTATGAGAAGACTATGTATATGGTGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * *
10585 TAATCTTGAAAAGAATAGGGATTAGTTTGACTATTCACGTTTGTCTTATTTAAGAGACAAACTTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTTT
* ** * *
10650 GATTCTATCAAAAACAATGGAACGAAAAGCTTTTCTTATGACACTAAAGCATCAATGTCACGTAT
131 GATTCTATCAAAAACGATGGAA-GAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTAT
* * * * *
10715 CCTAATGAATGGAACGTGTTCCTGGTTCTCAATCTTGAAAAGAATGGAGACTGTTGC-ACGAATC
195 CCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGA-GAATC
* * * *
10779 AATGCTGGTCATATTTAAGGGATGAATTTTGATTTTAAAGAAAATTGGGCAAAGAAAAGACTTT-
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGA-TTTC
* *
10843 -ATGCAAAAGAAAATTATCAATATCATTTATCCTAATGAAGAGAATGTGTTTGA-TGTGCCTAAT
323 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTT-ATTGTGCCTAAT
*
10906 CACAAAATGAATGAAGATCATTACTAGAATCTATGTTTGACTCATTTGAGGCACGAACTTACACT
387 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACT
* *
10971 TTGCAAAAATTGGTGGGAACAAAG
452 TTACAAAAATTGGTGGGAAGAAAG
* * * * * ** *
10995 CCTTT-TT-CTGAAACCAAAGCATCAATATCATCTATCCTAATAAGAAGGCTACATTTATGGGGC
1 CCTTTCTTGC-GAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGC
* * * * * *
11058 CAAATCTTGAAAAGAA-GGAGGATTAGTATGATTGTTCAAGTTTGACTTATTTAAGAAAGTAAAC
65 CTAATCCTGAAAAGAATGG-GGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAAC
* * * * ** * *
11122 TTTGACTCTAACAAAAATGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTTACG
128 TTTGATTCTATCAAAAA-CGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* * * * * * *
11187 AATCCTAAAGAAGGGAATGCGTTTTTGGTACCCAATCTTGAAAAGAATGGAGGCTGTTACAAGAA
192 TATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
** * *
11252 TCAATGCTTACCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAA-AGAAACATT
257 TCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA-AAAGATT
* *
11316 TCCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTTACCTA
321 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTG-TGCCTA
** * *
11381 ATCACAAAATGGTTGAAGATCCTTACTAGAATCCATGTTTGACTCATTTGAGCCACGAACTTACA
385 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACA
11446 CTTTACAAAAATTGGTGGGAA-AATAG
450 CTTTACAAAAATTGGTGGGAAGAA-AG
* * * * ***
11472 CCTTTCTTGGGAAACCAATGCATCAATATCATGTATCCTTATGAGAATACTATGTTTACATTG-C
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * * *
11536 TAAATCCTGAAAAAGAATGGAGATTAGAATGACTATTCATGTTTGTCCTACTTAAGAGACAAAC-
66 T-AATCCTG-AAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACT
* * * * * * * * * * *
11600 TTGTATTATAGCAAAAACGGTTGAAATAAAAGCTTTTCTTACGACCCCAAATCATAAATGTTAGG
129 TTG-ATTCTATCAAAAAC-GATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* * *
11665 TATCCTAATGAAGGGAATTTGTTTTTGGTTCCCAATCTTGAAAAAAATGGAGACTGTTACGAGAA
192 TATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
* * * * * * * *
11730 TCAATGCCTGCCTTATTTAAGGGATCAACTTTAATTTTAA-GAAAAGTCGGGCAAAGGAAACATT
257 TCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAA-TAGGGCAAAGAAAAGATT
* *
11794 TCCATGCAAAATAAAACCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAA
321 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAA
* * * * *
11859 TCATAGAATGAATGAAGATCATTACAAGGATCCATGTTTGACTCATTTGAGGCATGAACTTACAC
386 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACAC
* *
11924 TTTACAAAAGTTGCTGGGAAGAAAG
451 TTTACAAAAATTGGTGGGAAGAAAG
* * * * * * *
11949 CCTTTCTTGCAAAACCAAACCATCAATATCGTTTATCC-TAGCGAGAAGACTGTGTTTATAGCGC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTA-TGAGAAGACTATGTTTATGGTGC
** * * *
12013 CTAATATTGAAAAGATTGGGGATTAGTATCACTGTTCAAGTTTGACTTATTTAAGAGACCAAACT
65 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACT
* ** * * * *
12078 TTGATTCTATGAAAATATTA-GTAAGAAAAGCTTTTCTTGCCACACCAAAACATCAATGTCTTGT
129 TTGATTCTATCAAAA-ACGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* *
12142 ATCCTAATGAAGAGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATAGAGACTGTTACGAGAAT
193 ATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAAT
* * * *
12207 CGA-GCCTTGTCATACTTAAGTGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
258 CAATG-CTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
* * * **
12271 TCATGCAAAAAAAAATCATCAATATCATTTATCCTAATGAGGAGAACGTGTTTACAGTGCCTAAT
322 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
* * ** * *
12336 CACAAAATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTC-TATTGAGGTGCGAACCTAGAC
387 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT-TTGAGGCACGAACTTACAC
* *
12400 TATACAAAAATTGGTGAGAAGAAAG
451 TTTACAAAAATTGGTGGGAAGAAAG
* *
12425 CCTTTCGTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATCTTTATGGTGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * *
12490 TAATCCTGAAAAAAATGGGGATTAGTTTGATTATTCATGTTTGTCTTATTTAAGAGACAAACTTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTTT
* * ** * *
12555 GATTCTATCAAAAATGATGGAACAAAAAGCCTTTT-TTATGACACGAAAGCATCAATGTCACGTA
131 GATTCTATCAAAAACGATGGAA-GAAAAG-CTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
* * * *
12619 TCCTAATGAATGGAATGTGTTCTTGGTTCTCAATCTTGAAAAGAATGGAGACTGTTGCAAGAATC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
* * ** * * * *
12684 GATGCTGGTCATATTTAAGGGATGATTTTTGTTTTTAAGGAAAATTGGGCAAAAAAAAGATTTTC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
* ***
12749 ATGTAAAAGAAAATCATCAATATCATTTATCCTACCAAGGAGAATGTGTTTATTGTGCCTAATCA
324 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCA
* *
12814 CAAAATGATTGAAGATCATTGCTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTT
389 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTT
*
12879 ACAAAAATTGGTGGGAACAAAG
454 ACAAAAATTGGTGGGAAGAAAG
* * * * * *
12901 CCTTTCTTGCGAAACCAATGCATCAATATTGTCTATCCTAATGAGAGGACTATGTTTATGGGGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * **
12966 TAATCCTGAAAAGAAT-GGG-TTAGTATGATTGTTCAAGTTTGACTTATTTAAGAGGGTAAACTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGA-GACAAACTT
* * * * * ** *
13029 TGACTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTTTTGAA
130 TGATTCTATCAAAAA-CGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
** * * * *
13094 TCCTAATGAAGGGAATGCATTATTGGTACCCAATCTTGAAAAGAGTGGAGACTGTTACAAGAATC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
** * * *
13159 AATGCTTACCTTATTTAAGAGATGAACTTTGATTTTAAGGAAAATAGGGCAAA-AGAAACATTTC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA-AAAGATTTC
* * *
13223 CATGCAAAATAAAATCATCAATATCATTTATCCTAATAAGGAGAATGCGTTTATTGTGCCTAATC
323 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATC
* * * *
13288 ACAAAAATGGATGAAGATCATTACTAGAATCCATGTTTGAATAATTTGAGTCACGAACTTACACT
388 AC-AAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACT
13353 TTACAAAAATTGGTGGGAA-AACAG
452 TTACAAAAATTGGTGGGAAGAA-AG
* * ** * ***
13377 CCTTTCTTGGGAAACCAAAGCATCAATATCATGTATCCTTACAAGAATACTATGTTTACATTG-C
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * * *
13441 TAAATCCTGAAAACGAATGGAGATTAGAATGACTATTCATGTTTGTCCTACTTAAGAGACAAAC-
66 T-AATCCTGAAAA-GAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACT
* * * * * * * * * *
13505 TTGTATTATAGCAAAAACGGTTGAAATAAAAGCTTTTCTTGCGACCCCAAATCATAAATGTGAGG
129 TTG-ATTCTATCAAAAAC-GATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* * * *
13570 TATCCTAATGAAGGGAATTTGTTTTTGATTCCCAATCTTGAAAAGAATGAAGACTGTTACGAGAA
192 TATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
* * * * *
13635 TCAATGCTTGCCTTATTTAAGGGATGAACTTTAATTTTAAGGAAAATCGGGCAAAG-GAAGCATT
257 TCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAG-ATT
* * *
13699 TCCATGCAAAATAAAATCATCAATATCATTTATCCTAACGAGGAGAATGTGTTTATTGTGTCTAA
321 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAA
* * *
13764 TCACCAAATGAATGAAGATCATTACTAGAATCCATGTTTAACTCATTTGAGACACGAACTTACAC
386 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACAC
*
13829 TTTACAAAAATTGCTGGGAAGAAAG
451 TTTACAAAAATTGGTGGGAAGAAAG
* * * * * * * * *
13854 CCTTTCTTGTGAAACCAAACCATCGATATCGTCTATCC-TAGTCAGAACACTACGTTTATAGCGC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTA-TGAGAAGACTATGTTTATGGTGC
* * * * ** *
13918 CTAATCTTGAAAAAAATGGGGATTAGTATCACTGTTCAAGTTTGACTTATTTTCGGGAGCAAACT
65 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACT
* * * * * * * *
13983 TTGATTCTATGAAAAA-TAGTGGTAACAAATGCTTTTCTTGCGACACCAAAACGTCAATATCTTG
129 TTGATTCTATCAAAAACGA-TGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
** * *
14047 TATCCTACCGAAGGAAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATAGAGACTGTTACGAGAA
192 TATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
* * * *
14112 TCGAA-GCTTGTCATACTTT-AGTGATGAATTTTCATTTTAAGGAAAATAGGGCAAACAAAAGAT
257 TC-AATGCTTGTCATA-TTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGAT
* * * * *
14175 TTTCATGCAAAAGAAAATCATCAGTATCACTTATCCTAATGAGGAGAATGTGTTTATAGTGCATA
320 TTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTA
* * * *
14240 ATCACAAAATGATTGAAGATCATTACTAGAATCCATGTTTGTCTC-TATTGAGGCACGAACCTAG
385 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT-TTGAGGCACGAACTTAC
* **
14304 ACTATACAAAAATTGGCAGGAAGAAAG
449 ACTTTACAAAAATTGGTGGGAAGAAAG
* * *
14331 CCTTTCGTACGAAACCAAAGCATCAATATCGTGTATCCTAATGAGAAGACTATGTTTATGGTGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * *
14396 TAATCTTCAAAAGAATGGGGATTAGTTTGACTATTCACGTTTGTCTTATTTAAGAGACAAACTTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTTT
* ** * *
14461 GATTCTATCAAAAACCATGGAACGAAAAGCTTTTCTTATGACACTAAAGCATCAATGTCACGTAT
131 GATTCTATCAAAAACGATGGAA-GAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTAT
* * *
14526 CCTAATGAATGGAATGTGTTCTTGGTTCTCAATCTTGAAAAGAATGGAGACTATTAC-ACGAATC
195 CCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGA-GAATC
* ** * * * *
14590 GATGCCGGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATTGGGCAAATAAAAGATTTTC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
* * *
14655 ACGCAAAAGAAAATCATCAATATAATTTATCCTGATGAGGAGAATGTGTTTATTGTGCCTAATCA
324 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCA
* * *
14720 CAAAATGAATGAAGATCATTACTTGAATCCATGTTTGACTCATTTGGGGCACGAACTTACAGTTT
389 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTT
* * * *
14785 ACGAAAATTGGTAGGAACATA-
454 ACAAAAATTGGTGGGAAGAAAG
* * *
14806 CCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGGGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * *
14871 TAATCCTGAAAAGAATGGGGATTAGTATGATTGTTCAAGTTTGACTTATTTAAGAAAGTAAACTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACTT
* * * * * * * *
14936 TGACTCTAACAAAAAAGGTTGAAAGAAAAGGTTTTCTTGCGACACCAAAGCATCAATGTTATGAA
130 TGATTCTATC-AAAAACGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
** * * * *
15001 TCCTAATGAAGGGAATGCATTTTTGGTACCCAATCTTGAAAAGAATGGAGACTATTACAAGAATC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
** * * ** *
15066 AATGCTTACCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAATAGGATAAA-AGAAATATTTC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA-AAAGATTTC
* * * *
15130 CATGCAAAATAAAATCTTCAATATCATTTATCCTGATGAGGAGAATGCGTTTATTGTGCCTAATC
323 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATC
* *
15195 ACAAAAATGGATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTATACT
388 AC-AAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACT
15260 TTACAAAAATTGGTGGGAA-AACAG
452 TTACAAAAATTGGTGGGAAGAA-AG
* * * * * * *** *
15284 CTTTTCTTGGGAAACCAAAGCGTCAATATCGTGCATCCTTACGAGAATACTATGTTTACATTG-T
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * * **
15348 TAAATCCCGAAAAAGAATGGGGATTAGAATGACTATTCATGTTTTGTCCTACGTAAGAGACAAAC
66 T-AATCCTG-AAAAGAATGGGGATTAGTATGACTATTCAAG-TTTGACTTATTTAAGAGACAAAC
* * * * * * * * *
15413 -TTGTATTATAGCAAAAATTGTTGAAATAAAAGCTTTTCTTGCGACCCCAAAGCATAAATGTCAG
128 TTTG-ATTCTATCAAAAA-CGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* * *
15477 GTATCCTAATGAAGGGAATGCGTTTTTGGTTCGCAATCTTGAAAAGAATGGAGACTGTTACGAGA
191 GTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGA
* * * * *
15542 ATCAATGCTTGCCTTATTTAAGGGATGAACTTTAATTTTAATGAAAATCA-GGCAAAG-GAAGCA
256 ATCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAAT-AGGGCAAAGAAAAG-A
* * * *
15605 TTTCCATGCAAAAATAAAATCATCAATATCATTTATCCTAACGAGAAGAATGTGTTTATTGTGTC
319 TTTCCATGC-AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCC
*
15670 TAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGACACGAACTTA
383 TAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTA
*
15735 CACTTTACAAAAATTGCTGGGAAGAAAG
448 CACTTTACAAAAATTGGTGGGAAGAAAG
* * * * ** * **
15763 CCTTTCTTGTGAAACCAAACCATCAATATCATCTATCC-TAGTGAGAAGACTACATTTATAGCAC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTA-TGAGAAGACTATGTTTATGGTGC
* * * * ** *
15827 CTAATCTTGAAAAAAATGGGGATTAGTATCACTGTTCAAGTTTGACTTATTTTCGGGAGCAAACT
65 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACT
* * * * *
15892 TTGATTCTATGAAAAA-TAGTGGTAAGAAATGCTTTTCTTGCGACACCAAAACATCAATGTCTTG
129 TTGATTCTATCAAAAACGA-TGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* *
15956 TATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATAGAGACTATTACGAGAA
192 TATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
* * ** * * *
16021 TCGAGGCTTGTCATACATAAGTGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAGGATTT
257 TCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
* * * **
16086 CCATGCAAAAAAAAATCATCAATATCATTCATCCTAATAAGGAG-ATGTGTTTACAGTGCCTAAT
322 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
* * * * *
16150 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCT-TTATTGAGGCGCGAACCTAGAC
387 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT-TTGAGGCACGAACTTACAC
*
16214 TATACAAAAATTGGTGGGAAGAAA-
451 TTTACAAAAATTGGTGGGAAGAAAG
*
16238 ----------G-AAGCAAAGGC-TCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGC
1 CCTTTCTTGCGAAACCAAA-GCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGC
* * * * * **
16291 CTAAACCTGAAAAGAAGGGGGATTAGTATGACTATTCATGTTAGTCAAATTTAAGAGACAAACTT
65 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTT
* ** * *
16356 TGATACTATCAAAAATTATGGTAAGAAAAGCTTTTCTTGCGGCACCAAAGCATCAATGTCGTGTA
130 TGATTCTATCAAAAACGATGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
* * * * *
16421 TCCAAATGAAGGGAATGTGTTCTTGGTTCCCAACCTTGGAAAGAATGGAGACAGTTACAAGAATC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
* * * * * *
16486 GAGGCTTGTCATACTTT-AGTGATGAATTTTCATTTTAAGGAAAATAGGGCAAAGAAAAGATTTT
259 AATGCTTGTCATA-TTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTC
* * **
16550 CATGCAAAAGAAAATCATTAGTATCATTTATCCTAATGAGGAGAATGTGTTTACAGTGCCTAATC
323 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATC
* * * * * * *
16615 ATAAAATGATTGAAGATCATTACTAGAATCGATGTTTGTCTC-TATTGAGGAACGAACCTAGACT
388 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT-TTGAGGCACGAACTTACACT
* * *
16679 ATACAAAAATTGGCGAGAAGAAAG
452 TTACAAAAATTGGTGGGAAGAAAG
* * * *
16703 CCTTTCGTGCGAAACTAAAGAATTAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * * * *
16768 TAATCTTGAAAAGAATGGGGATTAGTTTGATTGTTCATGTTTGTCTAATTTAAGAGACAAACTTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTTT
* * **
16833 AATTCTATTAAAAACCG-TGGAACGAAAAGCTTTTCTTATGACACCAAAGCATCAATGTCATGTA
131 GATTCTATCAAAAA-CGATGGAA-GAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
** * * * * *
16897 TCCTTGTGAATGGAATGTGTTCTTGGTTCTCAATCTTGAAAAGAATGGAGATTGTTGCAAGAATC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
* ** * * * *
16962 GATGCCGGTCATATTTAAGGAATGAATTTTGATTTTAAGGAAAATTGGGCAAAGAAAAGATTTTC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
* ** * * * * *
17027 ACGCAAAAGAAAATTGTCAATATCATTTATCCTAATAAGGAGAATGTGTTTGTTATGACGAATCA
324 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCA
*
17092 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACGCTTT
389 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTT
*
17157 ACAAAAATTGGTGGGAATAAAG
454 ACAAAAATTGGTGGGAAGAAAG
* * * * * * * * ** *
17179 CCTTTTTTCCGAAACCAAAACATCAATATCCTCTATCCTAATAAGAAGGCTACATTTATGGGGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * *
17244 TAATCCTGAAAAGAA-GGAGGATTAGTATGATTGTTCAAGTTTGACTTATTTAAGAAAGTAAACT
66 TAATCCTGAAAAGAATGG-GGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACT
* * * * ** *
17308 TTGACTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTTTTGA
129 TTGATTCTATCAAAAAC-GATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
** * * * * *
17373 ATCCTAATGAAGGGAATGCATTTTTGGTACCCAATCTTGAAAAGAATGGAGGCTATTACAAGAAT
193 ATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAAT
** * * *
17438 CAATGCTTACCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAAGGCAAA-AGAAACATTT
258 CAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA-AAAGATTT
* * * *
17502 CCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTCACTATGCCTAAT
322 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
* * * *
17567 CACAAAATGGATGAAGATCCTTACTAGAATCCGTGTTTGACTCGTTTGAGGCACGAACTTACACT
387 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACT
17632 TTACAAAAATTGGTGGGAA-AATAG
452 TTACAAAAATTGGTGGGAAGAA-AG
* * * *
17656 CCTTTCTTGGGAAACCAAAGCATCAATATTGTGTATCCTTATGAGAATACTAT-TTT-TGCATTG
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATG--GTG
* * * * **
17719 -CTAAATCCTGAAAAAGAATGGGGATTAGAATGACTATTCATGTTTGTCCTATTTAAGAGATGAA
64 CCT-AATCCTG-AAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAA
* * * * * * *
17783 C-TTGTATTATAGCAAAAACGGTCGAAATAAAAGCTTTTCTTGCGACCCCAAAGCATCAGTGTCA
127 CTTTG-ATTCTATCAAAAACGAT-GGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
* * *
17847 GGTATCCTAATGAAGGGAATGTGTTTTTGGTTCGCAATCTTGAAAAGAATGGAGACTGTTACGAG
190 TGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAG
* * * * * *
17912 AATCAATGCTTGCCTTATTTAAGGGATAAACTTTAATTTTAAGGAAAATCA-GGCAAAGGAAACA
255 AATCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAAT-AGGGCAAAGAAAAGA
* * *
17976 TTTCCATGCAGAATAAAATCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATTGTGCCT
319 TTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCT
* *
18041 AATCTCAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTGC
384 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTAC
** *
18106 ACTTTACAAAAATTACTGGAAAGAAAG
449 ACTTTACAAAAATTGGTGGGAAGAAAG
* * * * * * *
18133 CCTTTCTTGTGAAACCAAA-CTGTCAATATCGTCTATCC-TAGCGAGAAGACTACGTTTATAGCG
1 CCTTTCTTGCGAAACCAAAGC-ATCAATATCGTGTATCCTTA-TGAGAAGACTATGTTTATGGTG
* * * *
18196 CTTAATCTTGAAAAGAATGGGGATTAGTATCACTGTTCAAGTTTGACTTATTTAACG-GAGCAAA
64 CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAA-GAGA-CAAA
* * * * *
18260 CTTTGATTCTATGAAAAA-TAGTGGTAAGAAAAGCTTTTCTTGCAACACCAAAACATCAATGTCT
127 CTTTGATTCTATCAAAAACGA-TGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
* ** * *
18324 TGTATCCTAATGAAGGGAATGTGTTCTTAGTTATCAATCTTAAAAAGAATAGAGACTGTTACGAG
190 TGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAG
* * * * * * *
18389 AATCTAGGCTTCTCATACTTAAGTGATGAATTTTGGTTTTAAGGAAAATAGGGCAAAGAAAAGAT
255 AATCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGAT
* **
18454 TTCCATGCAAAAGAAAATCATCAATATCATTCATCCTAAT-ATGGAGAATGTGTTTACAGTGCCT
320 TTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGA-GGAGAATGTGTTTATTGTGCCT
* * * *
18518 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTC-TACTGAGGCGCGAACCTA
384 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT-TTGAGGCACGAACTTA
* * *
18582 GACTATACAAATATTGGTGGGAAGAAAG
448 CACTTTACAAAAATTGGTGGGAAGAAAG
* * * * * * *
18610 CCTTTCTTGTGAAACCAAACCATCAATATCGTCTATCC-TAGCGAGAAGACTACGTTTATAGCGC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTA-TGAGAAGACTATGTTTATGGTGC
* * * *
18674 CTAATCTTGAAAAGAATGGGGATTAGTATCACTGTTCAAGTTTGACTTATTTAAGGGAGCAAACT
65 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACT
* * * * *
18739 TTGATTCTATGAAAAA-TAGTGGTAAGAAAAGCTTTTCTTGCAACACCAAAACATCAATGTCTTG
129 TTGATTCTATCAAAAACGA-TGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* ** * * *
18803 TATCCTAATGAAGGGAATGTGTTCTTAGTTATCAATCTTAAAAAGAATAGAGACTGTTATGAGAA
192 TATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
* * * * * * *
18868 TCTAGGCTTCTCATACTTAAGTGATGAATTTTGGTTTTAAGGAAAATAGGGCAAAGAAAAGATTT
257 TCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
* **
18933 CCATGCAAAAGAAAATCATCAATATCATTCATCCTAAT-ATGGAGAATGTGTTTACAGTGCCTAA
322 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGA-GGAGAATGTGTTTATTGTGCCTAA
* * * * *
18997 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTC-TACTGAGGCGCGAACCTAGA
386 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT-TTGAGGCACGAACTTACA
*
19061 CTATACAAAAATTGGTGGGAAGAAAG
450 CTTTACAAAAATTGGTGGGAAGAAAG
* * * * * * *
19087 CCTTTCTTGTGAAACCAAACCATCAATATCGTCTATCC-TAGCGAGAAGACTACGTTTATAGCGC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTA-TGAGAAGACTATGTTTATGGTGC
* * * *
19151 CTAATCTTGAAAAGAATGGGGATTAGTATCACTGTTCAAGTTTGACTTATTTAAGGGAGCAAACT
65 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACT
* * * *
19216 TTGATTCTATGGAAAATA-G-TGGTAAGAAAAGCTTTTCTTGCAACACCAAAACATCAATGTCCT
129 TTGATTCTAT-CAAAA-ACGATGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* ** * *
19279 GTATCCTAATGAAGGGAATGTGTTCTTAGTTATCAATCTTAAAAAGAATAGAGACTGTTACGAGA
191 GTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGA
* * * * * * *
19344 ATCTAGGCTTCTCATACTTAAGTGATGAATTTTGGTTTTAAGGAAAATAGGGCAAAGAAAAGATT
256 ATCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATT
* **
19409 TCCATGCAAAAGAAAATCATCAATATCATTCATCCTAAT-ATGGAGAATGTGTTTACAGTGCCTA
321 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGA-GGAGAATGTGTTTATTGTGCCTA
* * * * *
19473 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTC-TACTGAGGCGCGAACCTAG
385 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT-TTGAGGCACGAACTTAC
*
19537 ACTATACAAAAATTGGTGGGAAGAAAG
449 ACTTTACAAAAATTGGTGGGAAGAAAG
* ** * * *
19564 CCTTTCTTGGGAAACCAAAGTGTCAATATCGTGTGTCCTTATGAGAAGGCTATGTTAATGGTGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * *
19629 TAATCCTGAAAAGAATGGGGATTAGTTTAACTATTCATGTTT-ATCTTATTTAAGAGATAAACTA
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGA-CTTATTTAAGAGACAAACTT
* * * ** *
19693 TGATTCTATCAAAAACGATAGAACAAAAACCTTTTCTTATGACACCAGAGCATCAATGTCATGTA
130 TGATTCTATCAAAAACGATGGAA-GAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
* * * * * * *
19758 TCCTAGTGAATGGAATGTGTTCTTGGTTCTCAATCTTCAAAAGAATGGAGACTATTGCAAGAATC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
* * * * * * *
19823 GATGCTGGTCATATTTATGGGATGAATTTTGATTTTAAGAAAAATTGGGCAAAGAAAAGATTTTC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
* * * * *
19888 ATGCAAAAAAAAATCATCAATATCGTTTATCCCAATGAGGAGAATGCGTTTATTGTGCCTAATTA
324 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCA
* * * * *
19953 CAAAATGAATGATGATCATTACTAGAATCTATGTTTGACTCATTTAAGGTACGAATTTACACTTT
389 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTT
**
20018 ACAAAAATTGGTGGGAACTAAG
454 ACAAAAATTGGTGGGAAGAAAG
* * * * * * * * * * *
20040 CCTTTGTTGCGAAACTAATGCATCAATATTGTCTATCCTAATGAAAAGAATACGTTTTTGGGGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * *
20105 TAATCCTGAAAAGAATGGGGATTAGTATGATTGTTCAAGTTTGACTTATTTAAGGGAATAAACTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAG-ACAAACTT
* * * * * * * *
20170 TGACTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGTGACACTAAAGCATCAATGTTATGAA
130 TGATTCTATCAAAAAC-GATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
* ** * * * * *
20235 TCCTAAAGAAGGGAATGCCTTTTTGGTACCCAATCGTGAAAAGAATGAAGACTGTTACAAGAATC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
* * *
20300 AATGCTTAG-CTTATTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAA-AGAAACATTT
259 AATGCTT-GTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA-AAAGATTT
*
20363 CCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
322 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
* *
20428 CACAAAATGGATGAAGATCATTACTAGAATCCATGTTTGACTTATTTGAGGCACGAACTTACACT
387 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACT
*
20493 TTACAAAAATTGGTGGCAA-AACAG
452 TTACAAAAATTGGTGGGAAGAA-AG
* * * * * * *
20517 CCTTTCTTGGGAAAACCAAAGCATAAATATCATGTATCCCTATGAGAATACTATGTTTACGTTG-
1 CCTTTCTTGCG-AAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGC
* * * * * *
20581 CTAAATCCTGAAAAAGAATGGGGATTAGAATAACTATTCATGTTTGTCCTATTTATGAGACAAAC
65 CT-AATCCTG-AAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAAC
* * * * * * * * *
20646 -TTGTATTATAGCAAAAATGGTTGAAATAAAAGCTTTTCTTGCGTCCCCAAAGCATCAATGTCAG
128 TTTG-ATTCTATCAAAAA-CGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* * * **
20710 GTATCCTAATGAAGGGAATGCGTTTTTGGTTTCCAATCTTGAAAAGAATGGAGACTGTTAAAAGA
191 GTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGA
* * * * * *
20775 ATCAATGCTTGCCTTATTTTAGGGATGAACTTTAATTTTAAGGAAAATTGGGCAAAAGAAACG-T
256 ATCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGC-AAAGAAAAGAT
* * *
20839 TTCCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTATGCTTA
320 TTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTA
* * ** *
20904 ATTACAAAATGAATGAAGATCATTACTAGAATCCATATTTGACTCATTTGAGGCATTAACTTATA
385 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACA
* *
20969 CTTTACAAAAATTGCTGGAAAGAAAG
450 CTTTACAAAAATTGGTGGGAAGAAAG
* * * * * * * *
20995 CCTTTCTTGTGAGACCAAACCATCAATATCATCTATCC-TAGCGAGAAGACTACT-TTTATAGCG
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTA-TGAGAAGACTA-TGTTTATGGTG
* * * *
21058 CCTAATCTTGAAAAGAATGGGGATTAGTATCACTGTTCAAGTTTGACTTATTTAAGGGAACAAAC
64 CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAG-ACAAAC
* * * *
21123 TTTGATTCTATGAAAAA-TAGTGGTAAGAAAAGCTTTTCTTGCGACACCAAAACATCAATGTCCT
128 TTTGATTCTATCAAAAACGA-TGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* * *
21187 GTATCCTAATAAAGGGAATGTGTTCTTGGTTCCCAATCATGAAAAGAATAGAGACTGTTACGAGA
191 GTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGA
* * * * * * *
21252 ATCAAGGCTTGTCATACTTGAGTGATGAATTTTCATTTTAAGGAAAATAGGGCAAAGAAAATATT
256 ATCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATT
* * * *
21317 TTCATGTAAAAGAAAATCATCAATATCATTTTTCCTAATGAGGAGAATGTGTTTATAGTGCCTAA
321 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAA
* * * *
21382 TCACAAAAAGAATGAAGATCATTACTAGAATCCATGTTTGTCTC-TATTGAGGCGCGAACCTACA
386 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT-TTGAGGCACGAACTTACA
*
21446 CTATACAAAAATTGGTGGGAAGAAAG
450 CTTTACAAAAATTGGTGGGAAGAAAG
* * *
21472 CCTTTCATGCGAAAACAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * *
21537 TAATCCTGAAAAGAATGGGGATTAGTTTAACTATTCATGTTTGTCTTATTT-A-AGACAAACTTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTTT
* * ** * *
21600 GATTCTATTAAAATCGATGGAACGAAAAGCTTTTCTTATGACAGCAAAGCATCAATGTCACGTAT
131 GATTCTATCAAAAACGATGGAA-GAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTAT
* * * * *
21665 CTTAATGAATGGAATGTGTTCTTGGTTCTCAATCTT-AAATGGAATGGAGACTGTTACAAGAATC
195 CCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAA-AGAATGGAGACTGTTACGAGAATC
* * * * * *
21729 GATGCTGGTCATATTTAAGGGATGGATTTTGATTTTAAGGAAAATTGGGCAAAGAAAAGATTTTC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
*
21794 GTGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCA
324 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCA
* * *
21859 CAAAATGAATTAAGATCTTTACTAGAATCCATGTTTGACTCATTTGAGGCATGAACTTACACTTT
389 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTT
21924 ACAAAAATTGGTGGGAACG-AAG
454 ACAAAAATTGGTGGGAA-GAAAG
* * * * * * ** *
21946 CCTTTCTTGCAAAACCAAAGCATTAATATCGTCTATCCTAATAAGAAGACCACATTTATGGGGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * *
22011 TAATCCTGAAAAGAATGGGGATTAGTATGATTGTTGAAGTTTGACTTATTTAAGAGAGTAAACTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACTT
* ** * * * * * *
22076 TGACTCTAAGAAAAATGGCTGAAAGAAAAGCTTATCTTGCGACACCAAAGCATCAATGTTATGAA
130 TGATTCTATCAAAAA-CGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
** * * *
22141 TCCTAATGAAGGGAATGCATTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACAAGAATC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
** * * * * *
22206 AATGCTTACCTTATTTAAGGGATGAACTTTGAGTTTAAGGAAAATCGGGCAAAGGAAACATTTCC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
* * *
22271 ATGCAAAATAAAATCATCAATATCATTTATCCTAAAGAGAAGAATGTGTTTATTGTGCCTAATCA
324 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCA
22336 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTT
389 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTT
* *
22401 ACAAAAATTGCTGAGAAGAAAG
454 ACAAAAATTGGTGGGAAGAAAG
* * * * * * * *
22423 ACTTTCTTGTGAAACCAAACCATCAACATCGTCTATCC-TAGCGAGAAGACT-TCATTTATAGTG
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTA-TGAGAAGACTAT-GTTTATGGTG
* * *
22486 CCTAATCTTGAAAAGAATGGGGATTAGTATCG-CTGTTCAAGTTTGACTTATTTAAGGGAGCAAA
64 CCTAATCCTGAAAAGAATGGGGATTAGTAT-GACTATTCAAGTTTGACTTATTTAAGAGA-CAAA
* * * * * *
22550 CTGTGATTCTATGAAAAA-TAGTGGTAAGAAAAGCTTTTCTTGTGACACCAAAACATCAATGTCT
127 CTTTGATTCTATCAAAAACGA-TGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA
* * * * *
22614 TGTATCCTAATGAAGAGAATGTGTTCTTTGTTCCCAATCTTGAAAAGAATAGAGACTATTATGAG
190 TGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAG
* * * * * *
22679 AATCGAGGCTTGTCATACTTAAGTGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAATAT
255 AATCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGAT
* * ** *** *
22744 TTCCATGCAAAAAAAAATCATCAATATCATTCATCCTAACAAGGAGAATGTGTTTACAATGACTA
320 TTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTA
* * * * * *
22809 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTC-TATTGAAGCGCCAACCTAG
385 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT-TTGAGGCACGAACTTAC
*
22873 ACTGTACAAAAATTGGTGGGAAGAAAG
449 ACTTTACAAAAATTGGTGGGAAGAAAG
** *
22900 CCTTTCGAGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACCATGTTTATGGTGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * *
22965 TAATCCTGAAAAGAATGGGGATTAGTATGACCATTCATGTTTGTCTTATTTAAGAGACAAACTTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTTT
** * * **
23030 GACACTATC-AAAACTTG-TGGTAAGAAATGCTTTTCTTG-TAGTTCCAAAGCATCAATGTCATG
131 GATTCTATCAAAAAC--GATGG-AAGAAAAGCTTTTCTTGCGA-CACCAAAGCATCAATGTCATG
* * * *
23092 TATCCAAATGAAGGGAATGTGTTCTTGGTTTCCAATCTTAAAAAGAATGGAGATTGTTACGAGAA
192 TATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
** * * * * ** * * *
23157 TTGAGGCTTGTCATACTT-AGGTGATCAATTTTGATTTTGGGGAAAATAGGGTAAAGGAAACATT
257 TCAATGCTTGTCATATTTAAGG-GATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATT
* * * *
23221 TCCA--CAAAAAAAAATCATCAATATCCTTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAA
321 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAA
* * ** * * **
23284 TCACAAAATGAAAGAAGATAATTACTAGAATCCATAATTGTCTCATTTGAGGCACAAACTTAGGC
386 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACAC
* * *
23349 CTTATAAAAATTGGTGGGAAAAAAG
451 TTTACAAAAATTGGTGGGAAGAAAG
* * * * *
23374 CCTTTCTTGTGAAACAAAAGCTTCAATATCGTGTATCCTTATGAGAAAACTATGTTTATAGTGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* *
23439 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTTT
* * * ** * *
23504 GATTTTATCAAAAATGATGGAACGAAAAGCTTTTTTTATGACACCAAGGCATCAATGTCACGTAT
131 GATTCTATCAAAAACGATGGAA-GAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTAT
* * * * * * * **
23569 CCTAATGAATGGAAAGTTTTCTTGGTTCTCAATCTTGAAAAGAATGGAGAGTATTACAAGAATTG
195 CCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCA
* * * * * *
23634 ATGCTGGTCATAATTAAGGGATGAATTTTGATTTTAAGGAAAATTGGGCAAAGAAAGGATCTCCA
260 ATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCA
*
23699 TGCAAAAGAAAATCATCAATATCATTTAT-CTGAATGAGGGGAATGTGTTTATTGTGCCTAATCA
325 TGCAAAAGAAAATCATCAATATCATTTATCCT-AATGAGGAGAATGTGTTTATTGTGCCTAATCA
* *
23763 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTGCTCTTT
389 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTT
*
23828 ACAAAAATTGGTGGGAACAAAG
454 ACAAAAATTGGTGGGAAGAAAG
* * * * **
23850 CCTTTCTTGCGAAACCAAAGCATCAGTATCGTCTATCCTAATGAGAATACTACATTTATGG-GAC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTG-C
* * * * * *
23914 CTAATCCTGAAAAAAATAGGGATTAGTGTGATTGTTCAAGTTTGACTTATTTAAGAGAGTAAACT
65 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACT
* * *
23979 TTGATTCTAACAAAAGCGAT-------AAGCTTTTCTTGCGACACCAAAGCATCAATGTCGTGTA
129 TTGATTCTATCAAAAACGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
* * * * * *
24037 TCCTAATGAAGAGAATGTGTTTTTGGTGCCCAATCTTGAAAAGAATGGAGACTATTATGAGAGTC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
** * * * *
24102 AATGCTTACCTTATTTAAGGGATGATGAACTTTGATTTTAAAG-AAATAGGGCAAAGGAAACATT
259 AATGCTTGTCATATTTAA-GG--GATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATT
* * * *
24166 TTCATACAAAATG-AAATCATCAATATCATTTATCCTAATGAAGAGAATGTATTTATTGTGCCTA
321 TCCATGCAAAA-GAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTA
* *
24230 ATCACAAAATGGATGAAGATCATTACTAGAATCCATGTTCGACTCATTTGAGGCACGAACTTACA
385 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACA
* *
24295 CTTTACAAAAATTGGTGGCAAAAAAG
450 CTTTACAAAAATTGGTGGGAAGAAAG
* * * * *
24321 CCTTTCTTGGGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAATACAATGTTTACGGTG-C
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * *
24385 TAAATCCTGAAAATAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTT
66 T-AATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTT
* * * * * *
24450 T-ATTCTAGCAAAAACAGTTGAAATAAAAGCTTTTCTTAG-GACCCCAAAGCATCAATGTCAGGT
130 TGATTCTATCAAAAAC-GATGGAAGAAAAGCTTTTCTT-GCGACACCAAAGCATCAATGTCATGT
24513 ATCCTAATGAAGGGAATGTGGTT-TTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
193 ATCCTAATGAAGGGAATGT-GTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
* * * * * *
24577 TCAATGCTTGCCTTATTTAAGGGATGAACATTGATTTTAAGGAAAAT-GGGGAAAAAGAAACATT
257 TCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA-AAAGATT
* *
24641 TCCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTAATGTGCCTAA
321 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAA
* * * *
24706 TCACAAAATGAATGAAGCTCACTACTAGAATCCGTGTTTGACTCATTTGAGGCACAAACTTACAC
386 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACAC
* *
24771 TTTATAAAAATTGCTGGGAAGAAAG
451 TTTACAAAAATTGGTGGGAAGAAAG
* * * * * * *
24796 CCTTTCTTGCAAAACCAAACCATCAATAT-GATCTATCCTAACGAGAAGACTACGTTTTTAGG-G
1 CCTTTCTTGCGAAACCAAAGCATCAATATCG-TGTATCCTTATGAGAAGACTATGTTTAT-GGTG
* *
24859 CCTAATCTTGAAAAGAATGGGGATTAGTATGACTGTTCAAGTTTGACTTATTTAAGAGAGCAAAC
64 CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAAC
* * * * *
24924 TTTGATTCTATAAAAAACGGTGGTAAGAAAAGCTTTTCTTTCAACACCAAAGCATCAATGTCCTG
128 TTTGATTCTATCAAAAACGATGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* * * * * *
24989 TATCCTAACGAAGGGAAAGTGTTCTTGGTTCCCAATCTTGAATAGAGTAGAGACTGTTATGAGAA
192 TATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
* * * ** * * * *
25054 TCGAGGCTTATCATACCTAAGTGATGAATTTTGATTTTAAGGAAAAT-TGGCAAAGAATAGATTT
257 TCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
* *
25118 CCATGCAAATGAAAATCATCAATATCATTCATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
322 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
* * * *
25183 CACAAAATGAATGAAGATCATTACTAGAATCCACGATTGACTCATTTGAGGCACAAACTTAGACT
387 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACT
*
25248 TTACAAAAATTGGTAGGAACG-AAG
452 TTACAAAAATTGGTGGGAA-GAAAG
* * * * * * * * *
25272 CTTTTCTTACGAAACCAACGCATCAATATTGTCTATCCTAAAGAGAAGACTACGTTTATGGGGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * *
25337 TAATCCAGAAAAGAATGGGGATTAGTAAGATTGTTCAAGTTTGAC-TATTTTAAGAGAGCAAACT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTA-TTTAAGAGA-CAAACT
* * * * * * * *
25401 TTGATACTAACAAAAAAGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGCCGTAT
129 TTGATTCTATC-AAAAACGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * *
25466 ATCCTAATGAAGAGAATGTGTTTTTGGTGCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAGT
193 ATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAAT
** * * * *
25531 CAATGCTTACCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAAGGCAAAGGAAACATTTC
258 CAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTC
* * * * *
25596 CAAGCAAAATAAAA--A-C---ATCA-ATATCCTAATGAGGAGAATGTTTTTGTTGTGCCTAATC
323 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATC
* *
25654 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTCGACTCATTTGAGGCACAAACTTACACTT
388 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTT
25719 TACAAAAATTGGTGGGAAGAAAG
453 TACAAAAATTGGTGGGAAGAAAG
* * * * * *
25742 CCTTTCTTGCGAAACCAAACCATCAATATCGTTTATCCTAACGAGGAGACTATGTTTATGG-GAT
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTG-C
* * * *
25806 CTAATCTTGAAAAGAATGGGGATTAGTATGACTGTTCAAGTTTGACTTATTTAAAAGAGCAAACA
65 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACT
* * * * *
25871 TTGATTCTATCAAAAACGGTGGTAAGTAAAGCATTTCATGCGACACAAAAGCATCAATGTCATGT
129 TTGATTCTATCAAAAACGATGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * * * *
25936 ATCCTAATGAAGGAAATGTGTTTTTGGTTTCCAATCTTAAAAAGAATAGAGATTGTTATGAGAAT
193 ATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAAT
* * ** * * *
26001 CGAGGCTTGTCATGCTTAAGTGATGAATTTTGATTTTAAGGAAAATAGGGCGAAGAAAAGATTTC
258 CAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTC
* * * * *
26066 CATGTAAATGAAAATCATCAATATCCTTTATCCTAATAAGGAGAATGTGTTTATAGTGCCTAATC
323 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATC
* ** * * * *
26131 ACAAAATGAGTGAAGATCATTACTAGAATCCATGTTTCTCTCTTTTGAGGCACGAACCTAGACTA
388 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTT
* **
26196 TACAAAAATGGGTCAGAAGAAAG
453 TACAAAAATTGGTGGGAAGAAAG
* *
26219 CCTTTCTTTCGAAACCAAAGCATCAATATCG-GTATCCTTATGAGAAGACTACGTTTATGGTGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * *
26283 TAATCCTGAAAA-AATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGATAAACTTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTTT
* **
26347 GATTCTATAAAAAACGATGGAAAGAAAAGCTTTTCTTATGACACCAAAGCAT-AATTGTCATGTA
131 GATTCTATCAAAAACGATGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAA-TGTCATGTA
* *
26411 TCCTAACGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
* ** * * * *
26476 GATGCTTACCTTATTTAAGGGATAAACTTTGATTTTAAGGAAAATAGGGTAAA-AGAAACATTTC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA-AAAGATTTC
* * * ** *
26540 CATGGAAAATAAAATCATCAATATGC-TATA-CCTTAATGAGGAGAATGTGTTTATACTACCTAA
323 CATGCAAAAGAAAATCATCAATAT-CATTTATCC-TAATGAGGAGAATGTGTTTATTGTGCCTAA
** * * *
26603 TCACAAAATGAAAAAAGATAATTATTAGAATCCATCATTAT-A-TCATTTGAGGCACGAACTTAC
386 TCACAAAATGAATGAAGATCATTACTAGAATCCAT-GTT-TGACTCATTTGAGGCACGAACTTAC
26666 ACTTTACAAAAATTGGTGGGAAGAAAG
449 ACTTTACAAAAATTGGTGGGAAGAAAG
* * *
26693 CCTTTCTTGCGAAACTAAAGCATCAATATTGTGTATCCTTATGAGAAGACTATGTTTATGGTGTC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * *
26758 TAATCCTGAAAAGAATGGGGATTAGTATGATTTTTCAAGTTGGACTTATTTGAGAGAGTAAACTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACTT
* * * * *
26823 TGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGCAACACCAAAGCATCAATGTCATGTA
130 TGATTCTATCAAAAA-CGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
* * * *
26888 TCCTAATGAAGGGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTATGAGAGTC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
** * * * * *
26953 AATGCTTACCTTATTTAAGGGATGAACTTTGATTTTGAGGAAAATAGGGCAAAGGAAACATTTCT
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
* *
27018 AAGCAAAATG-AAATCATCAATATCATTTATCGTAATGAGGAGAATGTGTTTATTGTGCCTAATC
324 ATGCAAAA-GAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATC
* * *
27082 ACAAAATGGATGAAGATCATTAGTAGAATCCATGTTTGACTCATTTGAGGCAAGAACTTACACTT
388 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTT
* * *
27147 TATAAAAATTGGTGAGAAAAAAG
453 TACAAAAATTGGTGGGAAGAAAG
* * * * *
27170 CCTTTCTTGGGAAACTAAAGCGTCAATATCGTGTATCCTTATAAGAATACTATGTTTATGGTG-C
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
** * * * *
27234 TAAATCCTGAAAA-AATTTGGATTAGTATGACTATTCATGTTTGTCTTATTTGAGAGACAAAC-C
66 T-AATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTT
* * ** * * ** * *
27297 TGTATTCTAGCAAAAACGGTCAAAATAAAAGCTTTTCTTACGA-ACGCAAAGCATCAACCTTAAG
130 TG-ATTCTATCAAAAACGAT-GGAAGAAAAGCTTTTCTTGCGACAC-CAAAGCATCAATGTCATG
* * *
27361 TATCCTAATGAAGGGAATGTGGTT-TTGGTTCCAAATCTTGAAAAAAATGGAGACTGTTACAAGA
192 TATCCTAATGAAGGGAATGT-GTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGA
* * * *
27425 ATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATT
256 ATCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATT
* *
27490 TCCATGCAAAATAAAATCATCAATATCATTTATCCTAACGAGGAGAATGTGTTTATTGTGCCTAA
321 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAA
* * **
27555 TCAAAAAATGAATGAAGCTCATTACTAGAATCCATGTTTGACTCATTTGAGGCATAAACTTACAA
386 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTAC-A
* * * *
27620 CTTTATAAAAATTGCTCGGAACAAAG
450 CTTTACAAAAATTGGTGGGAAGAAAG
* * * * *
27646 CCTTTCTTGCGAAACCAAAACATCAATATCGTCTATCCTAACGAGAAGACTACGTTTATAGGT-C
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTAT-GGTGC
* * *
27710 CTAATCTTAAAAAGAATGGGGATTAGTATGACTGTTCAAGTTTGACTTATTTAAGAGAGCAAACT
65 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACT
* * *
27775 TTGATTCTATCAAAAACGGTGGTAAGAAAAGCTTTTCTTGCGACAGCAAAGCATCAATGTCTTGT
129 TTGATTCTATCAAAAACGATGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* **
27840 ATCCTAACGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATAGG-GACTGTTGTGAGAA
193 ATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAAT-GGAGACTGTTACGAGAA
** * * * * * *
27904 TTGAGGCTTGTCATACTTAAGTGATGAATTTTGATTTTAAGGAAAATGGGGCAAAGAATAGATTT
257 TCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
* ** * *
27969 TCATGCAATTGAGAATCATCAATATCATTCATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
322 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
* * *
28034 CACAAAATGAATGAAGATCTTTACTAAAATCCACGTTTGACTCATTTGAGGCACGAACTTACACT
387 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACT
* * *
28099 TTACAAAAATTAGTAGGAACAAAG
452 TTACAAAAATTGGTGGGAAGAAAG
* * * * ** * * *
28123 CATTTCTTGCGAAACCAAAGCATCAATATTGTCTATCCTAACAAGAAGACTACGTATATGGGGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * *
28188 TAATCTTGAAAAGAATGGGGATTAGTATGATTGTTCAAGTGTGACTTATTTAAGAGAGTAAACTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACTT
* * * * * *
28253 TGATTCTAACAAAAATGGTTGAAAAAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCACGTA
130 TGATTCTATCAAAAA-CGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
* * * * ** * *
28318 TCCTAATGAAGGGAATGTGTTTTTGATACCCAATCTTGAAAACAATAAAGACTGTTATGAGAGTC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
** * * * * * * * *
28383 AATGCTTACCTTATTAAAGAGATGAACTTTGATTTTAAGAAAAATAGAGTAAAGGAAACA-TTCG
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTC-
*
28447 CATGCAAAATG-AAATCATCAATATCATTTATCCTAATGAGAAGAATGTGTTTATTGTGCCTAAT
323 CATGCAAAA-GAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
* * *
28511 CACAAAAT-AGATAAAGGTCATTACTAGAATCCATGTTTGACTCATTTGAGGCACAAACTTACAC
387 CACAAAATGA-ATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACAC
28575 TTTACAAAAATTGGTGGG-AGAAAAG
451 TTTACAAAAATTGGTGGGAAG-AAAG
* * * * * * *
28600 CTTTTCTTGGGAAACCTAAGCGTCAATATCGTATATCCTTATGATAATACTATGTTTATGGTG-C
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * * * *
28664 TAAATCCTGAAAAGAATAGGGATTAATATGGCTATTCATGTTTGTCTTATTTAAGAGATAAAC-T
66 T-AATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTT
* * * * * * *
28728 TGTATTCTAGCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACCCCAAGGCATCACTGTCAGGT
130 TG-ATTCTATCAAAAAC-GATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* ** * * *
28793 ATCCTAACGAAGAAAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAATGTTATGAGAAT
193 ATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAAT
* * * **
28858 CAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTATGGAAAATAGGGCACAAG-AAACTTTT
258 CAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCA-AAGAAAAGATTT
* * * * * * * *
28922 CCATGCAAAGGAATATTATCAATATCCTTTACCCTAAGGAGAAGAATGTGTTTATAGTGCCTAAT
322 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAAT
* * * * * *
28987 CACAAAATGAAAGAAGATAATTACTAGAATCGATGATTGTCTCATTTGAGGCACGAACTTAGACT
387 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACT
* *
29052 TTATAAAAAATTGGTGGGAAAAAAG
452 TTA-CAAAAATTGGTGGGAAGAAAG
* ***
29077 CCTTTCTTGCAAAACCAAAGCATCAATATCACATATCCTTATGAGAAGACTATGTTTATGGTGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * *
29142 TAATCCTAAAAAGAATGGGGATTAGTAAGACTATT-AATGTTTGCCTTATTTAAAAGACAAACTT
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAA-GTTTGACTTATTTAAGAGACAAACTT
* ***
29206 TGATTCTATCAAAAACTATGGAAAGAAAAGCTTTTCTTATAACACCAAAGCATCAATGTCATGTA
130 TGATTCTATCAAAAACGATGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
* ** * *
29271 TCCTAATGAATGGAATGTGTTCTTGGTTCTTATTCTTGAAAAGAATGCAGACTGTTACGAGAATC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
* * *
29336 ATTGCTAGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
* * *
29401 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGACAATGTGTTTTTTGTGCCTAATGA
324 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCA
* * *
29466 CAAAATGAATGAAGATCATGACTAGAATCCATATTTGGCTCATTTGAGGCACGAACTTACACTTT
389 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTT
29531 ACAAAAATTGGTGGGAAGAAAG
454 ACAAAAATTGGTGGGAAGAAAG
* * * * * * *
29553 CCTCTCTTGCGAAACCAACGCATCAATATCATCTATCCTAATGAGAAGACTACGTTTATGGGGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * *
29618 TAACCCT-AAGAAGAATGGGGATTAGTATGACTGTTCAAGTTTGACTTATTTGAGAGAGCAAACT
66 TAATCCTGAA-AAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAACT
** * * * * * * *
29682 TTGATTGAAGCGAAAACGGTTGAAAGAAAAGCTTTTCTTGCAACGCCAATGCATCAATGTCATGT
129 TTGATTCTATCAAAAAC-GATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGT
* * * * * * *
29747 AGCCTAATAAAGGGAATGTGTTTTTGGTACCCAATCTTGAAAATATTGGAGACTGTTATGAGAAT
193 ATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAAT
* * * * * * * * * *
29812 CAAGGCTTATCTTATTTAAGGAATAAACTTTGATTTTAGGGATAATAAGGCAAAGGAAACATTTC
258 CAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTC
* **
29877 CATGC-AAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTAACTAATC
323 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATC
*
29941 ACAAAATGGATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTT
388 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTT
* *
30006 TACAAAAATTGGTTGGAAAAAAG
453 TACAAAAATTGGTGGGAAGAAAG
** * * * * *
30029 CCTTTCTTATGAAACCAAAGCGTCAATATCATGTATCCTTACGAGAATACTAGGTTTATGGTG-C
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* * * ** *
30093 TAAATCCTTAAAAGAATGGGTATTAGTATGACCATTCGTGTTTGTCTTATTTAAGAGACAAACTT
66 T-AATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTT
* * * * * * * * * *
30158 GGATTTTAGCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACCCCAAAGTATCAAAGTTAGGTA
130 TGATTCTATCAAAAAC-GATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
* * * * * * *
30223 TCCTAGTGAAGGGAATATGTTTTTGGTTCCAAATCTTGAAAGGAATGGGGGCTGTTACGAGAATC
194 TCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC
* * * * * * *
30288 AATGCTTGCCTTATTTAAGTGATGAACTTTGATTTTAAAGAAAATAAGGCAAAGGAAATATTTCC
259 AATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
* * * * *
30353 ATCCAAAATAAAAGCATCAATATCATTTATCCTGAA-GAGGAGAATATGTTTATTGTACCTAATC
324 ATGCAAAAGAAAATCATCAATATCATTTATCCT-AATGAGGAGAATGTGTTTATTGTGCCTAATC
* * * * * *
30417 AGAAAATGAATGAAGATCAATACTAGATTCCAAGTTTGACTCATTTGAGGCA-TAAGCTTGCACT
388 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAA-CTTACACT
*
30481 TTATAAAAATTGGTGGGAAGAAAG
452 TTACAAAAATTGGTGGGAAGAAAG
* * * *
30505 CCTTTCTTGCAAAACCGAAGCATCAATAAT-GTCTATCCTAATGAGAAGACTATGTTTATAGG-G
1 CCTTTCTTGCGAAACCAAAGCATCAAT-ATCGTGTATCCTTATGAGAAGACTATGTTTAT-GGTG
* * * *
30568 CCTAATCCTGAAAAGACTGGGGTTTAGTATGACTGTTCAAGTTTGACTTATTTATGAGAGCAAAC
64 CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-CAAAC
* * *
30633 TTTGATTCTATCAAAAACGGTGGTAAGAAAAGCTTTTCTTGCAACACCAAAGCATTAATGTCATG
128 TTTGATTCTATCAAAAACGATGG-AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG
* * * ** *
30698 TATCCTAATGAAGAGAATGTGTTTTTGGTTCCCAATATTGAAAAGAATAAAGACTGTTATGAGAA
192 TATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA
* * * ** * * * * *
30763 TCGAGGCTTGTCATACTTAAGTAAAG-ATTTTGATTTTAATGAAAATAGGGCAAAGGAAATATTT
257 TCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
* * *
30827 TCATGCAAAATG-AAATCATCAATATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGCCTAA
322 CCATGCAAAA-GAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAA
** * * * * *
30891 TCACAAAATGAAAAAAAATCATTATTAGAATGCATGTTT-ATCTCCA-TTGAGGCATGAACTTAG
386 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGA-CT-CATTTGAGGCACGAACTTAC
* *
30954 ACATTACAAAAATTGGTAGGAAGAAAG
449 ACTTTACAAAAATTGGTGGGAAGAAAG
* * * *
30981 CCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATAAGAAGATTATGTTTATGGTGCC
1 CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* *
31046 TAATCCTGAAAAGAATTGGGATTAGTGTGACTATTC
66 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTC
31082 TTAAGTGAAA
Statistics
Matches: 19168, Mismatches: 2909, Indels: 783
0.84 0.13 0.03
Matches are distributed among these distances:
463 216 0.01
464 185 0.01
465 4 0.00
469 119 0.01
470 398 0.02
471 262 0.01
472 23 0.00
473 16 0.00
474 1282 0.07
475 1776 0.09
476 5207 0.27
477 7612 0.40
478 1546 0.08
479 446 0.02
480 76 0.00
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.31
Consensus pattern (475 bp):
CCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGACAAACTTT
GATTCTATCAAAAACGATGGAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATC
CTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAA
TGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCAT
GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACA
AAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTTAC
AAAAATTGGTGGGAAGAAAG
Found at i:31388 original size:351 final size:351
Alignment explanation
Indices: 30736--31422 Score: 911
Period size: 351 Copynumber: 2.0 Consensus size: 351
30726 TTCCCAATAT
* * * *
30736 TGAAAAGAATAAAGACTGTTATGAGAATCGAGGCTTGTCATACTTAAGTAAAGATTTTGATTTTA
1 TGAAAAGAATAAAGACTGTTACGAGAATCGAGGCCTATCATACTTAAGTAAAAATTTTGATTTTA
* * * * * *
30801 ATGAAAATAGGGCAAAGGAAATATTTTCATGCAAAATGAAATCATCAATATCATTTATCCTAATG
66 AGGAAAATAGGACAAAGAAAAGATTTCCATGCAAAATGAAATCATCAATATCATTTATCCTAATA
* * *
30866 AGGAGAATGTTTTTATAGTGCCTAATCACAAAATGAAAAAAAATCATTATTAGAATGCATGTTTA
131 AGGAGAATGTTTTTACAGTGCCTAATCACAAAATGAAAAAAAATCATTACTAGAATCCATGTTTA
* * *
30931 TCTCCATTGAGGCATGAACTTAGACATTACAAAAATTGGTAGGAAGAAAGCCTTTCTTGCGAAAC
196 TCTCCATTGAGGCACGAACTTAGACATTACAAAAAGTGGTAGGAACAAAGCCTTTCTTGCGAAAC
* * *
30996 CAAAGCATCAATATCGTCTATCCTAATAAGAAGATTATGTTTATGGTGCCTAATCCTGAAAAGAA
261 CAAAGCATCAATATCATCTATCCTAATAAGAAGACTATGTTTATGGTGCCAAATCCTGAAAAGAA
31061 TTGG-GATTAGTGTGACTATTCTTAAG
326 -TGGCGATTAGTGTGACTATTCTTAAG
*
31087 TGAAAAGAATAGAGACTGTTACGAGAATCGAGGCCTATCA-ACTTAAGTGAAGAAATTTT-ATTT
1 TGAAAAGAATAAAGACTGTTACGAGAATCGAGGCCTATCATACTTAAGT-AA-AAATTTTGATTT
* * *
31150 TAGGGAAAATAGGACAAAGAAAAGATTTCCATGC-AAATGAAAATCCTGAATATCATTTATCCTA
64 TAAGGAAAATAGGACAAAGAAAAGATTTCCATGCAAAATG-AAATCATCAATATCATTTATCCTA
** * *
31214 ATAAGGAGAAT-TTGTTTACAGTGCCTAATCACAAAATGAATGAAGATCCTTACTAGAATCCATG
128 ATAAGGAGAATGTT-TTTACAGTGCCTAATCACAAAATGAAAAAAAATCATTACTAGAATCCATG
** * * *
31278 TTTATCTCTTTTGAGGCACGAACTTA-CCTTTTACAAAAAGTGGT-GAGAACAAAGCCTTTTTTG
192 TTTATCTCCATTGAGGCACGAACTTAGAC-ATTACAAAAAGTGGTAG-GAACAAAGCCTTTCTTG
* ** * * * *
31341 TGAAACCAAAGTGTCAATATCATGTATCTTTATGAGAAGACTATGTTTATGGTGCCAAATCCTGA
255 CGAAACCAAAGCATCAATATCATCTATCCTAATAAGAAGACTATGTTTATGGTGCCAAATCCTGA
31406 AAAGAATGGCGATTAGT
320 AAAGAATGGCGATTAGT
31423 ATGCTTTTCA
Statistics
Matches: 290, Mismatches: 39, Indels: 14
0.85 0.11 0.04
Matches are distributed among these distances:
350 20 0.07
351 264 0.91
352 6 0.02
ACGTcount: A:0.38, C:0.13, G:0.18, T:0.30
Consensus pattern (351 bp):
TGAAAAGAATAAAGACTGTTACGAGAATCGAGGCCTATCATACTTAAGTAAAAATTTTGATTTTA
AGGAAAATAGGACAAAGAAAAGATTTCCATGCAAAATGAAATCATCAATATCATTTATCCTAATA
AGGAGAATGTTTTTACAGTGCCTAATCACAAAATGAAAAAAAATCATTACTAGAATCCATGTTTA
TCTCCATTGAGGCACGAACTTAGACATTACAAAAAGTGGTAGGAACAAAGCCTTTCTTGCGAAAC
CAAAGCATCAATATCATCTATCCTAATAAGAAGACTATGTTTATGGTGCCAAATCCTGAAAAGAA
TGGCGATTAGTGTGACTATTCTTAAG
Found at i:31894 original size:826 final size:826
Alignment explanation
Indices: 30302--31903 Score: 2324
Period size: 826 Copynumber: 1.9 Consensus size: 826
30292 CTTGCCTTAT
* * * *
30302 TTAAGTGATGAACTTTGATTTTAAAGAAAATAAGGCAAAGGAAATATTTCCATCCAAAATAAAAG
1 TTAAGTGAAGAAATTTGATTTTAAAGAAAATAAGGCAAAGAAAAGATTTCCATCCAAAATAAAAG
* ** *
30367 CATCAATATCATTTATCCTGAAGAGGAGAATATGTTTATTGTACCTAATCAGAAAATGAATGAAG
66 CATCAATATCATTTATCCTGAAAAGGAGAATATGTTTACAGTACCTAATCACAAAATGAATGAAG
* * * * * *
30432 ATCAATACTAGATTCCAAGTTTGACTCATTTGAGGCATAAGCTTGCACTTTATAAAAATTGGTGG
131 ATCAATACTAGAATCCAAGTTTGACTCATTTGAGGCAGAAGCTTACACTTTACAAAAAGTGGTGA
* *
30497 GAAGAAAGCCTTTCTTGCAAAACCGAAGCATCAATAATGTCTATCCTAATGAGAAGACTATGTTT
196 GAACAAAGCCTTTCTTGCAAAACCAAAGCATCAATAATG-CTATCCTAATGAGAAGACTATGTTT
* * * * * *
30562 ATAGGGCCTAATCCTGAAAAGACTGGGGTTTAGTATGACTGTTCAAGTTTGACTTATTTATGAGA
260 ATAGGGCCAAATCCTGAAAAGAATGGCGATTAGTATGACTGTTCAAGTTCGACTTATTTAAGAGA
* * * * * * *
30627 GCAAACTTTGATTCTATCAAAAACGGTGGTAAGAAAAGCTTTTCTTGCAACACCAAAGCATTAAT
325 GCAAACTTGGATACTAGCAAAAACGATGGAAAGAAAAACTTTTCTTGCAACACCAAAGCATCAAT
* * *
30692 GTCATGTATCCTAATGAAGAGAATGTGTTTTTGGTTCCCAATATTGAAAAGAATAAAGACTGTTA
390 GCCAGGTATCCTAATGAAGAGAATGTGTTTTTGGTTCCCAATATTGAAAAGAATAAAAACTGTTA
30757 TGAGAATCGAGGCTTGTCATACTTAAGTAAAGATTTTGATTTTAATGAAAATAGGGCAAAGGAAA
455 TGAGAATCGAGGCTTGTCATACTTAAGTAAAGATTTTGATTTTAATGAAAATAGGGCAAAGGAAA
* * *
30822 TATTTTCATGCAAAATGAAATCATCAATATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGC
520 TATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAAAGTGTTTATAGTGC
*
30887 CTAATCACAAAATGAAAAAAAATCATTATTAGAATGCATGTTTATCTCCATTGAGGCATGAACTT
585 CTAATCACAAAATGAAAAAAAATCATTATTAGAATGCATGTTTATCTCCATTGAGGCACGAACTT
* *
30952 AGACATTACAAAAATTGGTAGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTAT
650 AGACATTACAAAAATTGGTAGGAAGAAAGCCTTTATTACGAAACCAAAGCATCAATATCGTCTAT
* *
31017 CCTAATAAGAAGATTATGTTTATGGTGCCTAATCCTGAAAAGAATTGGGATTAGTGTGACTATTC
715 CCTAATAAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATTGGGATTAGTATGACTATTC
31082 TTAAGTGAAAAGAATAGAGACTGTTACGAGAATCGAGGCCTATCAAC
780 TTAAGTGAAAAGAATAGAGACTGTTACGAGAATCGAGGCCTATCAAC
* ** *
31129 TTAAGTGAAGAAATTTTATTTTAGGGAAAAT-AGGACAAAGAAAAGATTTCCATGC-AAATGAAA
1 TTAAGTGAAGAAATTTGATTTTAAAGAAAATAAGG-CAAAGAAAAGATTTCCATCCAAAAT-AAA
* * * * *
31192 ATCCTGAATATCATTTATCCT-AATAAGGAGAATTTGTTTACAGTGCCTAATCACAAAATGAATG
64 AGCATCAATATCATTTATCCTGAA-AAGGAGAATATGTTTACAGTACCTAATCACAAAATGAATG
** * *
31256 AAGATCCTTACTAGAATCCATGTTT-ATCTCTTTTGAGGCACGAA-CTTAC-CTTTTACAAAAAG
128 AAGATCAATACTAGAATCCAAGTTTGA-CTCATTTGAGGCA-GAAGCTTACAC-TTTACAAAAAG
* ** ** * *
31318 TGGTGAGAACAAAGCCTTTTTTGTGAAACCAAAGTGTCAATATCATG-TATCTTTATGAGAAGAC
190 TGGTGAGAACAAAGCCTTTCTTGCAAAACCAAAGCATCAATA--ATGCTATCCTAATGAGAAGAC
* * *
31382 TATGTTTAT-GGTGCCAAATCCTGAAAAGAATGGCGATTAGTATG-CTTTTCATGTTCGTCTTAT
253 TATGTTTATAGG-GCCAAATCCTGAAAAGAATGGCGATTAGTATGACTGTTCAAGTTCGACTTAT
* *
31445 TTAAGAG-GCAAACTTGGATACTAGCAAAAACGATTGAAAGAAAAACTTTTCTTGCAACTCCAAA
317 TTAAGAGAGCAAACTTGGATACTAGCAAAAACGATGGAAAGAAAAACTTTTCTTGCAACACCAAA
* * *
31509 GCATCAATGCCGGGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATAAA
382 GCATCAATGCCAGGTATCCTAATGAAGAGAATGTGTTTTTGGTTCCCAATATTGAAAAGAATAAA
* * *
31574 AATTGTTATGAGAATCGAGGCTTGTCATGCTTAAGTGAAGAATTTTGATTTTAATGAAAATAGGG
447 AACTGTTATGAGAATCGAGGCTTGTCATACTTAAGTAAAG-ATTTTGATTTTAATGAAAATAGGG
* *
31639 CAAAGGAAATATTTTCATGCAAAATAAAATCATCGATATCATTTATCCTAATGATGAGAAAGTGT
511 CAAAGGAAATATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAAAGTGT
* *
31704 TTATAGTGCCTAATCACAAAATGAAAAAAGATCATTATTAGAATGCATGTTTGTCTCCATTGAGG
576 TTATAGTGCCTAATCACAAAATGAAAAAAAATCATTATTAGAATGCATGTTTATCTCCATTGAGG
*
31769 CACGAACTTAGACATTACAAAAATTGGTAGGAAGAAAGCCTTTATTACGAAACCAAAGCATTAAT
641 CACGAACTTAGACATTACAAAAATTGGTAGGAAGAAAGCCTTTATTACGAAACCAAAGCATCAAT
* * *
31834 ATTGTTTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATTGGGATTAGTA
706 ATCGTCTATCCTAATAAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATTGGGATTAGTA
31899 TGACT
771 TGACT
31904 GTTCATGTTT
Statistics
Matches: 686, Mismatches: 79, Indels: 21
0.87 0.10 0.03
Matches are distributed among these distances:
825 144 0.21
826 307 0.45
827 230 0.34
828 2 0.00
829 3 0.00
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.31
Consensus pattern (826 bp):
TTAAGTGAAGAAATTTGATTTTAAAGAAAATAAGGCAAAGAAAAGATTTCCATCCAAAATAAAAG
CATCAATATCATTTATCCTGAAAAGGAGAATATGTTTACAGTACCTAATCACAAAATGAATGAAG
ATCAATACTAGAATCCAAGTTTGACTCATTTGAGGCAGAAGCTTACACTTTACAAAAAGTGGTGA
GAACAAAGCCTTTCTTGCAAAACCAAAGCATCAATAATGCTATCCTAATGAGAAGACTATGTTTA
TAGGGCCAAATCCTGAAAAGAATGGCGATTAGTATGACTGTTCAAGTTCGACTTATTTAAGAGAG
CAAACTTGGATACTAGCAAAAACGATGGAAAGAAAAACTTTTCTTGCAACACCAAAGCATCAATG
CCAGGTATCCTAATGAAGAGAATGTGTTTTTGGTTCCCAATATTGAAAAGAATAAAAACTGTTAT
GAGAATCGAGGCTTGTCATACTTAAGTAAAGATTTTGATTTTAATGAAAATAGGGCAAAGGAAAT
ATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAAAGTGTTTATAGTGCC
TAATCACAAAATGAAAAAAAATCATTATTAGAATGCATGTTTATCTCCATTGAGGCACGAACTTA
GACATTACAAAAATTGGTAGGAAGAAAGCCTTTATTACGAAACCAAAGCATCAATATCGTCTATC
CTAATAAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATTGGGATTAGTATGACTATTCT
TAAGTGAAAAGAATAGAGACTGTTACGAGAATCGAGGCCTATCAAC
Found at i:32163 original size:477 final size:477
Alignment explanation
Indices: 31087--33404 Score: 2893
Period size: 477 Copynumber: 4.9 Consensus size: 477
31077 TATTCTTAAG
* *
31087 TGAAAAGAATAGAGACTGTTACGAGAATCGAGGCCTATCA-ACTTAAGTGAAGAAATTTT-ATTT
1 TGAAAAGAATAGAGACTGTTACGAGAATCGAGGCTTGTCATACTTAAGTGAAG-AATTTTGATTT
* * * * * * *
31150 TAGGGAAAATAGGACAAAGAAAAGATTTCCATGCAAATGAAAATCCTGAATATCATTTATCCTAA
65 TAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAA
* * *
31215 TAAGGAGAATTTGTTTACAGTGCCTAATCACAAAATGAATGAAGATCCTTACTAGAATCCATGTT
130 TGAGGAGAATTTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTT
* ** * * * * *
31280 TATCTCTTTTGAGGCACGAACTTAC-CTTTTACAAAAAGTGGTGAGAACAAAGCCTTTTTTGTGA
195 TGTCTCCATTGAGGCACGAACTTACAC-TTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGA
** * * * * * *
31344 AACCAAAGTGTCAATATCATGTATCTTTATGAGAAGACTATGTTTATGGTGCCAAATCCTGAAAA
259 AACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAA
* * * * *
31409 GAA-TGGCGATTAGTATG-CTTTTCATGTTCGTCTTATTTAAGAG-GCAAACTTGGATACTAGCA
324 GAATTGG-GATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAGCAAACTTTGATTCTAACA
* * * * * *
31471 AAAACGATTGAAAGAAAAACTTTTCTTGCAACTCCAAAGCATCAATGCCGGGTATCCTAATGAAG
388 AAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACTAAAGCATCAATGCCAGGTATCCTAATGAAG
31536 GGAATGTGTTTTTGGTTCCCAATCT
453 GGAATGTGTTTTTGGTTCCCAATCT
* * * * *
31561 TGAAAAGAATAAAAATTGTTATGAGAATCGAGGCTTGTCATGCTTAAGTGAAGAATTTTGATTTT
1 TGAAAAGAATAGAGACTGTTACGAGAATCGAGGCTTGTCATACTTAAGTGAAGAATTTTGATTTT
* * * * *
31626 AATGAAAATAGGGCAAAGGAAATATTTTCATGCAAAATAAAATCATCGATATCATTTATCCTAAT
66 AAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAAT
* ** ** * *
31691 GATGAGAAAGTGTTTATAGTGCCTAATCACAAAATGAAAAAAGATCATTATTAGAATGCATGTTT
131 GAGGAGAATTTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * * * *
31756 GTCTCCATTGAGGCACGAACTTAGACATTACAAAAATTGGTAGGAAGAAAGCCTTTATTACGAAA
196 GTCTCCATTGAGGCACGAACTTACACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAA
* * * *
31821 CCAAAGCATTAATATTGTTTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGA
261 CCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGA
* * *
31886 ATTGGGATTAGTATGACTGTTCATGTTTGTCTTATTTAAAAGAGCAAACTTTGATTCTAACAGAA
326 ATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAGCAAACTTTGATTCTAACAAAA
* * *
31951 ACGGTTGAAAGAAAAGCTTTTCTTGCGATACTAAAGCATCAATGCCATGTATCTTAATGAAGGGA
391 ACGGTTGAAAGAAAAGCTTTTCTTGCGACACTAAAGCATCAATGCCAGGTATCCTAATGAAGGGA
* *
32016 ATGTGTTTTTGGTACCCAATCG
456 ATGTGTTTTTGGTTCCCAATCT
* * * * ** ** * * * * *
32038 TGAAAAGATTGGAGACTGTTAGGAGAATCAATACTTACCTTATTTAAGGGATGAAATTTGATTTT
1 TGAAAAGAATAGAGACTGTTACGAGAATCGAGGCTTGTCATACTTAAGTGAAGAATTTTGATTTT
* * * * *
32103 AAGGAGAGTAAGGCAAAGGAAACATTTCCGTGCAAAAGAAAATCATTAATATCATTTATCCTAAT
66 AAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAAT
* * * ** *
32168 GAAGAGAATGTGTTTATTGTAACTAATCACAAAATGGATGAAGATCATTACTAGAATCCATGTTT
131 GAGGAGAATTTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * *
32233 GACT-CATTTGAGGCACGAACTTACACTTTACAAAAATTGATGGGAAAAAAGCCTTTCTTGC-AG
196 GTCTCCA-TTGAGGCACGAACTTACACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGA-
* * * *
32296 AACCGAAGCATCAATTTTGTCTATCCTAATGATAAGACTATGTTTATAGG-GCCTAATCTTGAAA
259 AACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTAT-GGTGCCTAATCTTGAAA
* * * * * * *
32360 AGAATGGGGATTAGTATGACTGTTCAAGTTTGACATATTTAAGAGAGCAAACTTTGATTTTATCA
323 AGAATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAGCAAACTTTGATTCTAACA
* * * * * * **
32425 AAAACGGTGGTAAGAAAAGCTTTTCTTGTGACACCAAAGCATTAATGTCATATATCCTAATGAAG
388 AAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACTAAAGCATCAATGCCAGGTATCCTAATGAAG
* *
32490 GGAATGTGTTCTTGGTTCCCAATAT
453 GGAATGTGTTTTTGGTTCCCAATCT
* *
32515 TAAAAAGAATAGAGATTGTTACGAGAATCGAGGCTTGTCATACTTAAGTGAAGAATTTTGATTTT
1 TGAAAAGAATAGAGACTGTTACGAGAATCGAGGCTTGTCATACTTAAGTGAAGAATTTTGATTTT
* * * *
32580 AGGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAATGAAAATCATCAATATCATTTATCCTAAT
66 AAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAAT
* *
32645 GAGGAGAATTTATTTACAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
131 GAGGAGAATTTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* ** * *
32710 GTGTCTTTTGAGGCACAAACTTACACTTTACAAAAATTGGTGGGAAGAAATCCTTTCTTGCGAAA
196 GTCTCCATTGAGGCACGAACTTACACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAA
** * *
32775 CCAAAGTGTCAATATCGTTTATCCTTATGAGAAGACTATGTTTATGGTGCC-AAGTCTTGAAAAG
261 CCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAA-TCTTGAAAAG
* * * * * *
32839 AA-TGGCGATTAGTATGACTATTTATGTTTGTCTTATTTAAAAG-GTAAACTTGGATACTAGCAA
325 AATTGG-GATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAGCAAACTTTGATTCTAACAA
* *
32902 AAACGGTTGAAAGAAATGCTTTTCTTGCGACCAC-AAAGCATCAATGCCAGGTATCCTAATGAAA
389 AAACGGTTGAAAGAAAAGCTTTTCTTGCGA-CACTAAAGCATCAATGCCAGGTATCCTAATGAAG
*
32966 AGAATGTGTTTTTGGTTCCCAATCT
453 GGAATGTGTTTTTGGTTCCCAATCT
**
32991 TGAAAAGAATAGAGACTGTGTTACGAGAATCGAGGCTTGTCATACTTAAGCAAAGAATTTTGATT
1 TGAAAAGAATAGAGAC--TGTTACGAGAATCGAGGCTTGTCATACTTAAGTGAAGAATTTTGATT
** * * * *
33056 TTAATAAAAATAGGGTAAAGGAAACTTTTCCATGTAAAATAAAATCATCAATATCATTTATCCTA
64 TTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTA
* *
33121 ATGAGGAGAATTTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATAT
129 ATGAGGAGAATTTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGT
* ** * * *
33186 TTGACT-CATTTGAGATAAGAACTTACATTTTACAAAAATTAGTGGGAAGAAAGCCTTTCTTGCG
194 TTGTCTCCA-TTGAGGCACGAACTTACACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTGCG
* *
33250 AAACCAAAGCATCAATATCGTCAAT-CTAATGAGAAGACTATGTTTACGGTGCCTAATCTTGAAA
258 AAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTG-AA
* *
33314 AAGAATTGGGATTAGTGTGACTATTCTTGTTTGTCTTATTTAAGAGAGCAAACTTTGATTCTAAC
322 AAGAATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAGCAAACTTTGATTCTAAC
**
33379 AAAAATAGTTGAAAGAAAAGCTTTTC
387 AAAAACGGTTGAAAGAAAAGCTTTTC
33405 CAATCTTGAA
Statistics
Matches: 1565, Mismatches: 257, Indels: 39
0.84 0.14 0.02
Matches are distributed among these distances:
474 40 0.03
475 243 0.16
476 138 0.09
477 825 0.53
478 279 0.18
479 40 0.03
ACGTcount: A:0.37, C:0.14, G:0.19, T:0.31
Consensus pattern (477 bp):
TGAAAAGAATAGAGACTGTTACGAGAATCGAGGCTTGTCATACTTAAGTGAAGAATTTTGATTTT
AAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAAT
GAGGAGAATTTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
GTCTCCATTGAGGCACGAACTTACACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAA
CCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGA
ATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAGCAAACTTTGATTCTAACAAAA
ACGGTTGAAAGAAAAGCTTTTCTTGCGACACTAAAGCATCAATGCCAGGTATCCTAATGAAGGGA
ATGTGTTTTTGGTTCCCAATCT
Found at i:33787 original size:418 final size:418
Alignment explanation
Indices: 33049--34239 Score: 1877
Period size: 418 Copynumber: 2.9 Consensus size: 418
33039 AGCAAAGAAT
* * * * * **
33049 TTTGATTTTAATAAAAATAGGGTAAAGGAAACTTTTCCATGTAAAATAAAATCATCAATATCATT
1 TTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAATAAAATCATCAATATTGTT
* *
33114 TATCCTAATGAGGAGAATTTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAA
66 TATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAGTGAAGATCATTACTAGAA
* * *
33179 TCCATATTTGACTCATTTGAGATAAGAACTTACATTTTACAAAAATTAGTGGGAAGAAAGCCTTT
131 TCCATGTTTGACTCATTTGAGACAAGAACTTACATTTTACAAAAATTGGTGGGAAGAAAGCCTTT
*
33244 CTTGCGAAACCAAAGCATCAATATCGTCAATCTAATGAGAAGACTATGTTTACGGTGCCTAATCT
196 CTTGCGAAACCAAAGCATCAATATCGTCAATCTAATGAGAAGACTATGTTTACGGTGCCTAATCC
33309 TGAAAAAGAATTGGGATTAGTGTGACTATTCTTGTTTGTCTTATTTAAGAGAGCAAACTTTGATT
261 TGAAAAAGAATTGGGATTAGTGTGACTATTCTTGTTTGTCTTATTTAAGAGAGCAAACTTTGATT
*
33374 CTAACAAAAATAGTTGAAAGAAAAGCTTTTCCAATCTTGAAAAGAATGGAGACTGTTACGAGAAT
326 CTAACAAAAATAGTTGAAAGAAAAGCTTTTCCAATCTTAAAAAGAATGGAGACTGTTACGAGAAT
33439 CAATTCTTACCTTATTTAAGGGTTGAAC
391 CAATTCTTACCTTATTTAAGGGTTGAAC
* *
33467 TTTGATTTTAATGAAAATAGAGCAAAGGAAACATTTCCAAGCAAAATAAAATCGTCAATATTGTT
1 TTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAATAAAATCATCAATATTGTT
33532 TATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAGTGAAGATCATTACTAGAA
66 TATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAGTGAAGATCATTACTAGAA
* *
33597 TCCATGTTTGACTCATTTGAGACAAGAACTTACATTTTACAAAAATTGGTGGGCAGAGAGCCTTT
131 TCCATGTTTGACTCATTTGAGACAAGAACTTACATTTTACAAAAATTGGTGGGAAGAAAGCCTTT
*
33662 CTTGCGAAACCAAGGCATCAATATCGTCAATCTAATGAGAAGACTATGTTTACGGTGCCTAATCC
196 CTTGCGAAACCAAAGCATCAATATCGTCAATCTAATGAGAAGACTATGTTTACGGTGCCTAATCC
* *
33727 TGAAAAAGAATTGGGATTAGTGTGACTATTCTTGTTTGTCTCATTTAAGAGAGAAAACTTTGATT
261 TGAAAAAGAATTGGGATTAGTGTGACTATTCTTGTTTGTCTTATTTAAGAGAGCAAACTTTGATT
* *
33792 CTAACAAAAACAATTGAAAGAAAAGCTTTTCCAATCTTAAAAAGAATGGAGACTGTTACGAGAAT
326 CTAACAAAAATAGTTGAAAGAAAAGCTTTTCCAATCTTAAAAAGAATGGAGACTGTTACGAGAAT
*
33857 CAATTCTTACCTTATTTAAGGGTTGAGC
391 CAATTCTTACCTTATTTAAGGGTTGAAC
33885 TTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAATAAAATCATCAATATTGTT
1 TTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAATAAAATCATCAATATTGTT
*
33950 TATCCTACTGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAGTGAAGATCATTACTA-AG
66 TATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAGTGAAGATCATTACTAGA-
* * * * * **
34014 ATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTTATAAAAATTGCTGGGTTGAAAGCCTT
130 ATCCATGTTTGACTCATTTGAGACAAGAACTTACATTTTACAAAAATTGGTGGGAAGAAAGCCTT
* * ** * * * *
34079 TCTTGCGAAACCAAAGTATCAATATCATGTATGCTTATGAGAAAACTATGTTTATGGTGTCTAAT
195 TCTTGCGAAACCAAAGCATCAATATCGTCAAT-CTAATGAGAAGACTATGTTTACGGTGCCTAAT
* * * * **
34144 CCTG-AAAAGAA-TGAGGATTAGTATGATTATTCATGTTTGTCTTATTTTAGAGA-CAAACTCAG
259 CCTGAAAAAGAATTG-GGATTAGTGTGACTATTCTTGTTTGTCTTATTTAAGAGAGCAAACTTTG
* * * *
34206 ATTCTATCAAAAATGGTGGAAAGAAAAGTTTTTC
323 ATTCTAACAAAAATAGTTGAAAGAAAAGCTTTTC
34240 TTGTGACACC
Statistics
Matches: 712, Mismatches: 58, Indels: 7
0.92 0.07 0.01
Matches are distributed among these distances:
417 37 0.05
418 643 0.90
419 32 0.04
ACGTcount: A:0.37, C:0.14, G:0.17, T:0.32
Consensus pattern (418 bp):
TTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAATAAAATCATCAATATTGTT
TATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAGTGAAGATCATTACTAGAA
TCCATGTTTGACTCATTTGAGACAAGAACTTACATTTTACAAAAATTGGTGGGAAGAAAGCCTTT
CTTGCGAAACCAAAGCATCAATATCGTCAATCTAATGAGAAGACTATGTTTACGGTGCCTAATCC
TGAAAAAGAATTGGGATTAGTGTGACTATTCTTGTTTGTCTTATTTAAGAGAGCAAACTTTGATT
CTAACAAAAATAGTTGAAAGAAAAGCTTTTCCAATCTTAAAAAGAATGGAGACTGTTACGAGAAT
CAATTCTTACCTTATTTAAGGGTTGAAC
Found at i:34448 original size:159 final size:155
Alignment explanation
Indices: 34262--35240 Score: 417
Period size: 159 Copynumber: 6.2 Consensus size: 155
34252 AACATCAACG
* *
34262 TCATGTATCCTAATGAAGGGAATGTGTTTTTGGTACCCAATCTTGAAATGAATAGAGATTGTTAC
1 TCATTTATCCTAATGAAGAGAATGTGTTTTTGGTACCCAATCTTGAAATGAATAGAGATTGTTAC
*
34327 GAGAATCGATGTTGGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
66 GAGAATCAATGTT-GTC-TATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGG-AAAG-AAA
34392 GATTTCCATGCAAAAGAAAATCATCAATA
127 GATTTCCATGCAAAAGAAAATCATCAATA
* * * * * * * *** *
34421 TCTTTTATCCTAATGACGAAAATGTGTTTATAGTGCCTAATCACAAAATGAA-AGAAGA-TCTTA
1 TCATTTATCCTAATGAAGAGAATGTGTTTTTGGTACCCAATCTTGAAATGAATAG-AGATTGTTA
** * * * * * * **** *
34484 TTAGAATCCATGTTTTCTCCTTTGAGGCACGAACTTACCCTTTACA--AAAATTGGTTGAAAGAA
65 CGAGAATCAATGTTGTCT-ATTTAAGGGATGAACTTTGATTTTA-AGGAAAATAGG--GAAAGAA
* * * ** *
34547 AGCCTTTCC-TGCGACACCAAATCATCAATG
126 AG-ATTTCCATGCAAAAGAAAATCATCAATA
* * * * * *
34577 TCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATTTTGAAAAGAATGGAGATTGTTAC
1 TCATTTATCCTAATGAAGAGAATGTGTTTTTGGTACCCAATCTTGAAATGAATAGAGATTGTTAC
* * * * *
34642 GTGAATCAATGCTTGCCTTATTTAAGGGATAAACATTGATTTTAAGGAAAATAGGGTAGAGGAAA
66 GAGAATCAATG-TTGTC-TATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGG-A-AAGAAA
* * * *
34707 CATTTTCAAGCAAAAGAAAATCATAAATA
127 GATTTCCATGCAAAAGAAAATCATCAATA
* * * * * * * *** * **
34736 TCATTCATCCAAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA-AGAAAATAATTA
1 TCATTTATCCTAATGAAGAGAATGTGTTTTTGGTACCCAATCTTGAAATGAATAG-AGATTGTTA
* * * * * * * *
34800 CTAGAATCCATGATTGTCTCATATAAGGCACGAACTTAGACTTTATAA--AAAATGGTGGGAAGA
65 CGAGAATCAATG-TTGTCT-ATTTAAGGGATGAACTTTGA-TTT-TAAGGAAAATAG-GGAAAGA
* * * * *
34863 AAGCCTTT-CTTGCAAAACCAAAGT-GTCAATA
125 AAG-ATTTCCATGCAAAA-GAAAATCATCAATA
* * * * * * * * * * * * *
34894 TCGTGTATCCTTATG-AGAGGACTATGATTATGGTGCCTAATCCTGAAATGAATGGGGATTAATT
1 TCATTTATCCTAATGAAGA-GAATGTGTTTTTGGTACCCAATCTTGAAATGAATAGAGATT--GT
* * ** * * *
34958 TA--AGTATTCATAT-TTGTCTTATTTAAGAGACAAACTTGGATTCT-AGCAAAA-ACGGCTGAA
63 TACGAG-AATCA-ATGTTGTC-TATTTAAGGGATGAACTTTGATTTTAAGGAAAATA-GG--GAA
* * * * ** * ** * *
35018 AGAACTGCTTTTCTTGTGACACCAAAGCATCAATG
122 AGAA-AGATTTCCATGCAAAAGAAAATCATCAATA
* * ** * *
35053 TCATGTT-TCCTAATGTAGGGAATGCATTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTA
1 TCAT-TTATCCTAATGAAGAGAATGTGTTTTTGGTACCCAATCTTGAAATGAATAGAGATTGTTA
* ** * *
35117 TGAGAATCAATGCTTACCTTATTTAAGAGATGAACTTTGATTTTAATGAAAATAGGGCAAAGGAA
65 CGAGAATCAATG-TTGTC-TATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGG-AAA-GAA
* * *
35182 ACATTTTCATGCAAAATAAAATCATCAATA
126 AGATTTCCATGCAAAAGAAAATCATCAATA
* *
35212 TCATTTATCCTAATGAGGAGAATGCGTTT
1 TCATTTATCCTAATGAAGAGAATGTGTTT
35241 ATAGTGCGTA
Statistics
Matches: 579, Mismatches: 193, Indels: 96
0.67 0.22 0.11
Matches are distributed among these distances:
155 1 0.00
156 71 0.12
157 57 0.10
158 141 0.24
159 282 0.49
160 23 0.04
161 4 0.01
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (155 bp):
TCATTTATCCTAATGAAGAGAATGTGTTTTTGGTACCCAATCTTGAAATGAATAGAGATTGTTAC
GAGAATCAATGTTGTCTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGAAAGAAAGATT
TCCATGCAAAAGAAAATCATCAATA
Found at i:34785 original size:315 final size:316
Alignment explanation
Indices: 34213--34871 Score: 901
Period size: 315 Copynumber: 2.1 Consensus size: 316
34203 CAGATTCTAT
** * *
34213 CAAAAATGGTGGAAAGAAAAGTTTTTCTTGTGACACCAAAACATCAACGTCATGTATCCTAATGA
1 CAAAAATGGTGGAAAG-AAAGCCTTTCCTGCGACACCAAAACATCAACGTCATGTATCCTAATGA
* * *
34278 AGGGAATGTGTTTTTGGTACCCAATCTTGAAATGAATAGAGATTGTTACGAGAATCGATGTTGGT
65 AGGGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATAGAGATTGTTACGAGAATCAATGTTGGC
* * * *
34343 CATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
130 CATATTTAAGGGATAAACATTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCAAGCAAAAG
* * * *
34408 AAAATCATCAATATCTTTTATCCTAATGACGAAAATGTGTTTATAGTGCCTAATCACAAAATGAA
195 AAAATCATAAATATCATTCATCCAAATGACGAAAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * * * * *
34473 AGAAGAT-CTTATTAGAATCCATG-TTTTCTCCTTTGAGGCACGAACTTACCCTTTA
260 AGAAAATAATTACTAGAATCCATGATTGTCTCATATAAGGCACGAACTTACACTTTA
* * *
34528 CAAAAATTGGTTGAAAGAAAGCCTTTCCTGCGACACCAAATCATCAATGTCATGTATCCTAATGA
1 CAAAAA-TGGTGGAAAGAAAGCCTTTCCTGCGACACCAAAACATCAACGTCATGTATCCTAATGA
* * * *
34593 AGGGAATGTGTTTTTGGTTCCCAATTTTGAAAAGAATGGAGATTGTTACGTGAATCAATGCTT-G
65 AGGGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATAGAGATTGTTACGAGAATCAATG-TTGG
* * * * *
34657 CCTTATTTAAGGGATAAACATTGATTTTAAGGAAAATAGGGTAGAGGAAACATTTTCAAGCAAAA
129 CCATATTTAAGGGATAAACATTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCAAGCAAAA
* *
34722 GAAAATCATAAATATCATTCATCCAAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
194 GAAAATCATAAATATCATTCATCCAAATGACGAAAATGTGTTTATAGTGCCTAATCACAAAATGA
*
34787 AAGAAAATAATTACTAGAATCCATGATTGTCTCATATAAGGCACGAACTTAGACTTTA
259 AAGAAAATAATTACTAGAATCCATGATTGTCTCATATAAGGCACGAACTTACACTTTA
* *
34845 TAAAAAATGGTGGGAAGAAAGCCTTTC
1 -CAAAAATGGTGGAAAGAAAGCCTTTC
34872 TTGCAAAACC
Statistics
Matches: 298, Mismatches: 41, Indels: 8
0.86 0.12 0.02
Matches are distributed among these distances:
315 224 0.75
316 25 0.08
317 44 0.15
318 5 0.02
ACGTcount: A:0.38, C:0.14, G:0.19, T:0.30
Consensus pattern (316 bp):
CAAAAATGGTGGAAAGAAAGCCTTTCCTGCGACACCAAAACATCAACGTCATGTATCCTAATGAA
GGGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATAGAGATTGTTACGAGAATCAATGTTGGCC
ATATTTAAGGGATAAACATTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCAAGCAAAAGA
AAATCATAAATATCATTCATCCAAATGACGAAAATGTGTTTATAGTGCCTAATCACAAAATGAAA
GAAAATAATTACTAGAATCCATGATTGTCTCATATAAGGCACGAACTTACACTTTA
Found at i:36203 original size:476 final size:476
Alignment explanation
Indices: 34537--36643 Score: 2421
Period size: 476 Copynumber: 4.4 Consensus size: 476
34527 ACAAAAATTG
* * *
34537 GTTGAAAG-AAAGCCTTTCCTGCGACACCAAATCATCAATGTCA-TGTATCCTAATGAAGGGAAT
1 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAGT-TATCCTAATGAAGGGAAT
* * *
34600 GTGTTTTTGGTTCCCAATTTTGAAAAGAATGGAGATTGTTACGTGAATCAATGCTTGCCTTATTT
65 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTT
* * * * *
34665 AAGGGATAAACA-TTGATTTTAAGGAAAATAGGGTAGAGGAAACATTTTCAAGCAAAAGAAAATC
130 AAGAGATAAA-ATTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTTCATGCAAAATAAAATC
* * * * *
34729 ATAAATATCATTCATCCAAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAAA
194 ATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
* * * * *
34794 TAATTACTAGAATCCATGATTGTCTCATATAAGGCACGAACTTAGACTTTATAAAAAATGGTGGG
259 TAATTACTAGAATCCATGTTTGACTCAT-TAAGGCACGAACTTACACTTTACAAAAATTGGTGGG
** * * * * *
34859 AAGAAAGCCTTTCTTGCAAAACCAAAGTGTCAATATCGTGTATCCTTATGAGAGGACTATGATTA
323 AAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTACGTTTA
* * * * * *
34924 TGGTGCCTAATCCTGAAATGAATGGGGATTAATTTAAGTATTCATA-TTTGTCTTATTTAAGAGA
388 TGGTGCCTAATCCTGAAAAGAATGAGGATTAGTATAACTATTCA-AGTTTGACTTATTTAAGAGA
*
34988 -CAAACTTGGATTCTAGCAAAAACG
452 GCAAACTTGGATTCTAGCAAAAACA
* ** * *
35012 GCTGAAAGAACTGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTT-TCCTAATGTAGGGAAT
1 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA-GTTATCCTAATGAAGGGAAT
** * * * *
35076 GCATTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTATGAGAATCAATGCTTACCTTATTT
65 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTT
* * *
35141 AAGAGATGAACTTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTTCATGCAAAATAAAATCA
130 AAGAGATAAAATTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTTCATGCAAAATAAAATCA
* *
35206 TCAATATCATTTATCCTAATGAGGAGAATGCGTTTATAGTGCGTAATCACAAAATGAAAT-AAGA
195 TCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG-AATGAAGA
* * * * *
35270 TAATTATTCGAATCCATGTTTG-----TTGAGGCATGAACTTACACTTTACAAAAATTGGTGAGA
259 TAATTACTAGAATCCATGTTTGACTCATTAAGGCACGAACTTACACTTTACAAAAATTGGTGGGA
* * * *
35330 AGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATTGTCTATCCGAACGAGAAGACTACATTTAT
324 AGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTACGTTTAT
* * * *
35395 GG-GCCTTATTCTTGAAAAGAAT-AGGGATTAGTATTACTGTTCAAGTTTGACTTATTTAAGAGA
389 GGTGCC-TAATCCTGAAAAGAATGA-GGATTAGTATAACTATTCAAGTTTGACTTATTTAAGAGA
* * * *
35458 GCAAACTTTGATTCTAACAGAAACG
452 GCAAACTTGGATTCTAGCAAAAACA
* * * **
35483 GTTGAGAGAAACGCTTTTCTTGCGACACCAAAGCATCAATGTCACG-TATCCTAATAAAGCAAAT
1 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA-GTTATCCTAATGAAGGGAAT
* * * * * *
35547 GTGTTTTTAGTACACAAGCTTGAAAAGATTGGAGACTATTACGAGAATCAA-----GCCTTATTT
65 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTT
* * * * *
35607 AAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCATAATAAAATCA
130 AAGAGATAAAATTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTTCATGCAAAATAAAATCA
* * *
35672 TCAATATCACTTATCCTAATGAGGAGAATGTGTTTATCGTGCCTAATCACAAAATGGATGAAGAT
195 TCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* * *
35737 CATTACTAGAATCCATGTTTGACTCATTCAAGGCACGAACTTATACTTTACAAAAATTGGAGGGA
260 AATTACTAGAATCCATGTTTGACTCATT-AAGGCACGAACTTACACTTTACAAAAATTGGTGGGA
* * * * * ** * *
35802 AAAAAGCCTTTCTTACAAAACCAAAGCGTCAATATCGTGTATCCTTATGAGACTACTATGTTTGT
324 AGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTACGTTTAT
* ** *
35867 GGTGCTTAATCCTGAAAAGAATGAGGATTAGTATAACTATTCATTTTTGTCTTATTTAAGAGA-C
389 GGTGCCTAATCCTGAAAAGAATGAGGATTAGTATAACTATTCAAGTTTGACTTATTTAAGAGAGC
* *
35931 AAACTTGGATTCTAGCAAGAATA
454 AAACTTGGATTCTAGCAAAAACA
* * *
35954 GTTGAAGGAAAAGCTTTTCTTGCGACCCCAAAGCATCATTGTCAGTTATCCTAATGAAGGGAATG
1 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAGTTATCCTAATGAAGGGAATG
* * * * *
36019 CGTTTTTGGTTCCCAATCTTGAAATGAATGGAGATTGTTACAAGAATCAATGCTTGCCTTACTTA
66 TGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTA
* * * * *
36084 TGAGATAAAATTTCATTTTAAGGAAAATCGGGCAAAGGAAACA-TTTCTATGCAAAACAAAATCC
131 AGAGATAAAATTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTTC-ATGCAAAATAAAATCA
*
36148 TCAATATCATTTATCCTAATGAGGAGAATGTGTTTATCGTGCCTAATCACAAAATGAATGAAGAT
195 TCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* * *
36213 AATTATTAGAATCCATGTTTGACTCATTTGAGGCACAAACTTACACTTTACAAAAATTGGTGGGA
260 AATTACTAGAATCCATGTTTGACTCA-TTAAGGCACGAACTTACACTTTACAAAAATTGGTGGGA
* * *
36278 AGAAAGCCTTTCTTGCGAAAGCAAAGCATCAATATCGTCTATCCTAATGAGAAGACAACGTTTAT
324 AGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTACGTTTAT
* * * * * *
36343 GGGGCCTAATCCTAAAAACAATGGGGATTAGTATGACTGTTCAAGTTTGACTTATTTAAGAGAGC
389 GGTGCCTAATCCTGAAAAGAATGAGGATTAGTATAACTATTCAAGTTTGACTTATTTAAGAGAGC
* * *
36408 AAACTTTGATTCTATCAAAAACG
454 AAACTTGGATTCTAGCAAAAACA
* * * * * * **
36431 GTGGTAAGAAAGGCTTTTCTGGCAACACCAAAGCATCAATGTCAAG-TATCTTAATGAAAAGAAT
1 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC-AGTTATCCTAATGAAGGGAAT
* * * * ** ***
36495 GTGTTCTTGATTCCCAATCTTGAAAAGAATAGAGACTATTATAAGAATCGGGGCTTG--TTATAC
65 GTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTAT--
* * * * * * * * * *
36558 TTAAGTGATGAATTTTGATTTTAAAGAAAATATGGTAAAGAAAAGATTTCCATGC-AAATGAAAT
128 TTAAGAGATAAAATTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTTCATGCAAAAT-AAAA
* *
36622 TCATTAACATCATTTATCCTAA
192 TCATCAATATCATTTATCCTAA
36644 AGAAGACAAT
Statistics
Matches: 1366, Mismatches: 233, Indels: 64
0.82 0.14 0.04
Matches are distributed among these distances:
465 2 0.00
466 144 0.11
469 4 0.00
470 133 0.10
471 231 0.17
472 133 0.10
473 3 0.00
475 13 0.01
476 516 0.38
477 181 0.13
478 6 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.30
Consensus pattern (476 bp):
GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAGTTATCCTAATGAAGGGAATG
TGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTA
AGAGATAAAATTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTTCATGCAAAATAAAATCAT
CAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATA
ATTACTAGAATCCATGTTTGACTCATTAAGGCACGAACTTACACTTTACAAAAATTGGTGGGAAG
AAAGCCTTTCTTGCAAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTACGTTTATGG
TGCCTAATCCTGAAAAGAATGAGGATTAGTATAACTATTCAAGTTTGACTTATTTAAGAGAGCAA
ACTTGGATTCTAGCAAAAACA
Found at i:38087 original size:476 final size:473
Alignment explanation
Indices: 37336--38870 Score: 2004
Period size: 476 Copynumber: 3.2 Consensus size: 473
37326 GGCAACCTTG
* ** *
37336 GATCATTACTAGAATTCATGTTTGAATCATTTGAGGCACGAA-TCTAGACTATACAAAAATTGGT
1 GATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACT-TAGACTTTACAAAAATTGGT
* *
37400 GGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATTGTGTA--CTTATGAGAAGACTATGT
65 GGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGT
** *
37463 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGAAGATTCATGTTTATCTTATTTAAGA
130 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGA
* * *
37528 GACAAACTTGGATTCTAGCAAAAATGGTTGAAAGAAAAGCTTTTCCTACGACCCCAAAGCATCAA
195 GACAAACTTGGATTCTAGCAAAAATGGTTGAAAG-AAAGCTTTTCTTGCGACACCAAAGCATCAA
* * *
37593 TGTCAAGAATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATAGAGAATATT
259 TGTCAAGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATC-TGAAAAGAATAGAGACTGTT
* *
37658 ACGAGAATCAATGCTTGTCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
323 ATGAGAATCAATGCTTATCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
* * * *
37723 AAGATTTTCATACAAAAGAAAATCATCAATATCATCTATCCTAATGAGGAAAATGTGTTTATAAT
388 AA-ATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAAAATGTGTTTATAGT
37788 GCCTAATCACAAAATGAAAGAA
452 GCCTAATCACAAAATGAAAGAA
* * * * **
37810 GATCATTACTAGAATCCAGGTTTATCTCTTTTAAGGCACGAACTTACCCTTTACAAAAATTGGTG
1 GATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTG
* **
37875 GGAAGAAAGCCTTTCTTGTGAAACCAAAGTGTCAATATCGTGTATCCTTATGAGAAGACTATGTT
66 GGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTT
* ** * *
37940 TATGGTGCCAAATCTTGAAAAGAATGGTTATTAGTATGACTATTCATGTTCGTCTCATTTAAGAG
131 TATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAG
* * * * *
38005 GCAAACTTGGATGCTAGCAAAAATGGTTGAAAGAGAAGCTTTTCTTGTGACTCCAAAGCATCAAC
196 ACAAACTTGGATTCTAGCAAAAATGGTTGAAAGA-AAGCTTTTCTTGCGACACCAAAGCATCAAT
* *
38070 GCCAAGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCCTGAAAAGAATAAAGACTGTTA
260 GTCAAGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAAT-CTGAAAAGAATAGAGACTGTTA
* ** * * * * * * *
38135 TGACAATTGAGGCTTATCATACTTAAGTGAAGAATTTTGATTTTAACGAAAATTGGGCAAAGCAA
324 TGAGAATCAATGCTTATCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAG-AA
* * *
38200 ATATTTTCATGCAAAATAAAATCATCAATATAATTTATCCTAATGAGGAGAATGTGTTTATAGTG
388 AAATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAAAATGTGTTTATAGTG
*
38265 CCTAATCACAAAATGAAAAAA
453 CCTAATCACAAAATGAAAGAA
* * * * **
38286 GATCATTATTAGAATGCATGTTTGTCCCCA-TTGAGGCACAAACTTAGACAATACAAAAATTGGT
1 GATCATTACTAGAATCCATGTTTGT-CTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* * * * *
38350 GGGAAGAAAGCCTGTCTTGCGAAACCAAAGCATCATTATCATCTATCCTAATGAGAAGACTATGT
65 GGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGT
* * *
38415 TTATGGTGCCTAATCTAGAAAAGAATGGGGATTAGTATGACTATTTATGTTTGTCTTATTTTAGA
130 TTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGA
* * * * * *
38480 GAAAAACTTTGATTCTAAC-AAAACGGTTGAAAGAAACACTTTTCTTGCGACACCAAACCATCAA
195 GACAAACTTGGATTCTAGCAAAAATGGTTGAAAGAAA-GCTTTTCTTGCGACACCAAAGCATCAA
* * * *
38544 TGTCATA-TATCCTAATGAAGAGACTGTATTTTTGGTTCCCAATCTAGAAAAGAATGGAGACTGT
259 TGTCA-AGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCT-GAAAAGAATAGAGACTGT
* * * * *
38608 TATGAGAATCAATGCTTACCTTATTTAAGGGATAAACTTTGATTTTAAGGAAATTAGGGCAAAGG
322 TATGAGAATCAATGCTTATCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGA
* * * *
38673 AAACTTTTCCATGCAAAATAAAATCATCAATATCATTTATCCTAATAAGGAGAACT-TGTTTATT
387 AAAATTTT-CATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGA-AAATGTGTTTATA
* *
38737 GTGCCCAATCACAAAATGAATGAA
450 GTGCCTAATCACAAAATGAAAGAA
* * * * *
38761 GATCATTACTAAAATCCATGATTGTCTCATTTGGGGCACGAACTTAGACTTTATAAAAATTGGCG
1 GATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTG
* * * *
38826 GGAAGAAAGCCTTTCTTGCGACACCAAAGCTTCAATGTCATGTAT
66 GGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTAT
38871 GCTAATGAAG
Statistics
Matches: 906, Mismatches: 142, Indels: 25
0.84 0.13 0.02
Matches are distributed among these distances:
474 105 0.12
475 298 0.33
476 497 0.55
477 6 0.01
ACGTcount: A:0.37, C:0.15, G:0.18, T:0.30
Consensus pattern (473 bp):
GATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAAATTGGTG
GGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTT
TATGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAG
ACAAACTTGGATTCTAGCAAAAATGGTTGAAAGAAAGCTTTTCTTGCGACACCAAAGCATCAATG
TCAAGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTGAAAAGAATAGAGACTGTTATG
AGAATCAATGCTTATCATATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAA
TTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAAAATGTGTTTATAGTGCCT
AATCACAAAATGAAAGAA
Found at i:38631 original size:158 final size:158
Alignment explanation
Indices: 38364--38651 Score: 346
Period size: 158 Copynumber: 1.8 Consensus size: 158
38354 AGAAAGCCTG
* * * * *
38364 TCTTGCGAAACCAAAGCATCATTATCATCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAAT
1 TCTTGCGAAACCAAACCATCAATATCATATATCCTAATGAGAAGACTATATTTATGGTGCCCAAT
* * * ** * ** *
38429 CTAGAAAAGAATGGGGATTAGTATGACTATTTATGTTTGTCTTATTTTAGAGAAAAACTTTGATT
66 CTAGAAAAGAATGGAGACTAGTATGACAATCAATGCTTACCTTATTTAAGAGAAAAACTTTGATT
38494 CTAACAAAACGGTTGAAAGAAACACTTT
131 CTAACAAAACGGTTGAAAGAAACACTTT
* * * * *
38522 TCTTGCGACACCAAACCATCAATGTCATATATCCTAATGA-AGAGACTGTATTTTTGGTTCCCAA
1 TCTTGCGAAACCAAACCATCAATATCATATATCCTAATGAGA-AGACTATATTTATGGTGCCCAA
* * *
38586 TCTAGAAAAGAATGGAGACT-GTTATGAGAATCAATGCTTACCTTATTTAAGGGATAAACTTTGA
65 TCTAGAAAAGAATGGAGACTAG-TATGACAATCAATGCTTACCTTATTTAAGAGAAAAACTTTGA
38650 TT
129 TT
38652 TTAAGGAAAT
Statistics
Matches: 106, Mismatches: 22, Indels: 4
0.80 0.17 0.03
Matches are distributed among these distances:
157 2 0.02
158 104 0.98
ACGTcount: A:0.35, C:0.15, G:0.17, T:0.33
Consensus pattern (158 bp):
TCTTGCGAAACCAAACCATCAATATCATATATCCTAATGAGAAGACTATATTTATGGTGCCCAAT
CTAGAAAAGAATGGAGACTAGTATGACAATCAATGCTTACCTTATTTAAGAGAAAAACTTTGATT
CTAACAAAACGGTTGAAAGAAACACTTT
Found at i:38968 original size:317 final size:316
Alignment explanation
Indices: 38520--39187 Score: 880
Period size: 317 Copynumber: 2.1 Consensus size: 316
38510 AAGAAACACT
* * * * * *
38520 TTTCTTGCGACACCAAACCATCAATGTCATATATCCTAATGAAGAGACTGTATTTTTGGTTCCCA
1 TTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGAGAATGGATTTATGGTACCCA
* *
38585 ATCTAGAAAAGAATGGAGACTGTTATGAGAATCAATGCTTACCTTATTTAAGGGATAAACTTTGA
66 ATCTAGAAAAGAATGGAGACTGTTATAAGAATCAATCCTTACCTTATTTAAGGGATAAACTTTGA
* * * * * *
38650 TTTTAAGGAAATTAGGGCAAAGGAAACTTTTCCATG-CAAAATAAAATCATCAATATCATTTATC
131 TTTTAAAGAAAATAAGGCAAAGGAAACATTTCCA-GACAAAATAAAAGCACCAATATCATTTATC
38714 CTAATAAGGAGAACT-TGTTTATTGTGCCCAATCACAAAATGAATGAAGATCATTACTAAAATCC
195 CTAATAAGGAGAA-TGTGTTTATTGTGCCCAATCACAAAATGAATGAAGATCATTACTAAAAT-C
* * * * *
38778 ATGATTGTCTCATTTGG-GGCACGAACTTAGACTTTATAAAAATTGGCGGGAAGAAAGCC
258 ATGATTGACT-AATTGGAGGCACGAACTTACACTTTACAAAAATTGGCAGGAAGAAAGCC
* * *
38837 TTTCTTGCGACACCAAAGCTTCAATGTCATGTATGCTAATGAAG-GAAATGGGTTTATGGTACCC
1 TTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGAG-AATGGATTTATGGTACCC
** *
38901 AATCTTA-AAATTAATGGAGACTGTTATAAGAATCAATACCTT-CCTTATTTAAGGGATGAACTT
65 AATC-TAGAAAAGAATGGAGACTGTTATAAGAATCAAT-CCTTACCTTATTTAAGGGATAAACTT
* * *
38964 TGATTTTAAAGAAAATAAGGTAAAGGAAACATTTCTAGACAGAATAAAAGCACCAATATCATTTA
128 TGATTTTAAAGAAAATAAGGCAAAGGAAACATTTCCAGACAAAATAAAAGCACCAATATCATTTA
* * * *
39029 TCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCCCAAAATGAATGAAGATCATTACTAGAATC
193 TCCTAATAAGGAGAATGTGTTTATTGTGCCCAATCACAAAATGAATGAAGATCATTACTAAAATC
* * *
39094 ATGTTTGACTAATTGGAGGCACGGACTTACACTTTACAAAAATTGGTAGGAAGAAAGCC
258 ATGATTGACTAATTGGAGGCACGAACTTACACTTTACAAAAATTGGCAGGAAGAAAGCC
** * *
39153 TTTCTTATGAAACCAAAGCATCAATATCATGTATC
1 TTTCTTGCGACACCAAAGCATCAATGTCATGTATC
39188 ATTATGAGAA
Statistics
Matches: 304, Mismatches: 41, Indels: 13
0.85 0.11 0.04
Matches are distributed among these distances:
315 5 0.02
316 78 0.26
317 216 0.71
318 5 0.02
ACGTcount: A:0.37, C:0.16, G:0.17, T:0.30
Consensus pattern (316 bp):
TTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGAGAATGGATTTATGGTACCCA
ATCTAGAAAAGAATGGAGACTGTTATAAGAATCAATCCTTACCTTATTTAAGGGATAAACTTTGA
TTTTAAAGAAAATAAGGCAAAGGAAACATTTCCAGACAAAATAAAAGCACCAATATCATTTATCC
TAATAAGGAGAATGTGTTTATTGTGCCCAATCACAAAATGAATGAAGATCATTACTAAAATCATG
ATTGACTAATTGGAGGCACGAACTTACACTTTACAAAAATTGGCAGGAAGAAAGCC
Found at i:39567 original size:788 final size:791
Alignment explanation
Indices: 38214--39658 Score: 2128
Period size: 788 Copynumber: 1.8 Consensus size: 791
38204 TTTCATGCAA
* *
38214 AATAAAATCATCAATATAATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
1 AATAAAAGCACCAATATAATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * *
38279 GAAAAAAGATCATTATTAGAATGCATGTTTGTCCCCATTGAGGCACAAACTTAGACAATACAAAA
66 GAAAAAAGATCATTACTAGAATGCATGTTTGTACCAATTGAGGCACAAACTTACACAATACAAAA
* * * *
38344 ATTGGTGGGAAGAAAGCCTGTCTTGCGAAACCAAAGCATCATTATCATCTATCCTAATGAGAAGA
131 ATTGGTAGGAAGAAAGCCTGTCTTACGAAACCAAAGCATCAATATCATCTATCATAATGAGAAGA
* * *
38409 CTATGTTTATGGTGCCTAATCTAGAAAAGAATGGGGATTAGTATGACTATTTATGTTTGTCTTAT
196 CTATGTTTATGGTACCTAATCCAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTAT
* * * *
38474 TTTAGAGAAAAACTTTGATTCTAACAAAACGGTTGAAAGAAACACTTTTCTTGCGACACCAAACC
261 TTAAAAGAAAAACTTGGATTCTAACAAAACGGTTGAAAG-AACACTTTTCTTACGACACCAAACC
* * *
38539 ATCAATGTCATATATCCTAATGAAGAGACTGTATTTTTGGTTCCCAATCTAGAAAAGAATGGAGA
325 ATCAATATCATATATCCTAATGAAGAGAATGTATTTTTGGTTCCCAATCTAGAAAAGAAAGGAGA
* *
38604 CTGTTATGAGAATCAATGCTTACCTTATTTAAGGGATAAACTTTGATTTTAAGGAAATTAGGGCA
390 CTGTTATGAGAATCAATGCTTACCTTATTTAAGGGATAAACTTTCATTTTAAGGAAAATAGGGCA
* * * * *
38669 AAGGAAACTTTTCCATGCAAAATAAAATCATCAATATCATTTATCCTAATAAGGAGAACTTGTTT
455 AAAGAAACATTTCCATGCAAAAGAAAAACATCAATATCATTTACCCTAATAAGGAGAACTTGTTT
* * * *
38734 ATTGTGCCCAATCACAAAATGAATGAAGATCATTACTAAAATCCATGATTGTCTCATTTGGGGCA
520 ATAGTGCCCAATCACAAAATGAAAGAAGATAATTACTAAAATCCATGATTGTCTCATTTGAGGCA
* * * *
38799 CGAACTTAGACTTTATAAAAATTGGCGGGAAGAAAGCCTTTCTTGCGACACCAAAGCTTCAATGT
585 CGAACATAGACATTATAAAAATTGGCGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATGT
38864 CATGTATGCTAATGAAGGAAATGGGTTTATGGTACCCAATCTTAAAATTAATGGAGACTGTTATA
650 CATGTATGCTAATGAAGGAAATGGGTTTATGGTACCCAATCTTAAAATTAATGGAGACTGTTATA
38929 AGAATCAATACCTTCCTTATTTAAGGGATGAACTTTGATTTTAAAGAAAATAAGGTAAAGGAAAC
715 AGAATCAATACCTTCCTTATTTAAGGGATGAACTTTGATTTTAAAGAAAATAAGGTAAAGGAAAC
38994 ATTTCTAGACAG
780 ATTTCTAGACAG
* * *
39006 AATAAAAGCACCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCCCAAAAT
1 AATAAAAGCACCAATATAATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
** * ** **
39071 GAATGAAGATCATTACTAGAAT-CATGTTTG-ACTAATTGGAGGCACGGACTTACACTTTACAAA
66 GAAAAAAGATCATTACTAGAATGCATGTTTGTACCAATT-GAGGCACAAACTTACACAATACAAA
* * * *
39134 AATTGGTAGGAAGAAAGCCTTTCTTATGAAACCAAAGCATCAATATCATGTATCATTATGAGAAG
130 AATTGGTAGGAAGAAAGCCTGTCTTACGAAACCAAAGCATCAATATCATCTATCATAATGAGAAG
* *
39199 ACTATGTTTTTGGTACCTAATCCAGAAAGGAATGGGGATTAGTATGACTATTCATGTTTGTCTTA
195 ACTATGTTTATGGTACCTAATCCAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTA
* * * *
39264 TTTAAAAGACAAACTTGGATTCTAGCAAAAACGGTTGAAAG-A-GC-TTTCTTACGACACCAAAG
260 TTTAAAAGAAAAACTTGGATTCTAAC-AAAACGGTTGAAAGAACACTTTTCTTACGACACCAAAC
* * * * * *
39326 CATCAATATCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTTCCAATTTTGAAAAGAAAGGAG
324 CATCAATATCATATATCCTAATGAAGAGAATGTATTTTTGGTTCCCAATCTAGAAAAGAAAGGAG
* * *
39391 ACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTCATTTTAATGAAAATAGGGC
389 ACTGTTATGAGAATCAATGCTTACCTTATTTAAGGGATAAACTTTCATTTTAAGGAAAATAGGGC
* * *
39456 AAAAGAAACATTTCCATGCGAAAGAAAAACATCAATATCATTTACCCTAATGAGGATAA-TGTGT
454 AAAAGAAACATTTCCATGCAAAAGAAAAACATCAATATCATTTACCCTAATAAGGAGAACT-TGT
* * * * **
39520 TTATAGTGCCTAATCAGAAAATTAAAGAAGATAATTTCTTGAATCCATGATTGTCTCATTTGAGG
518 TTATAGTGCCCAATCACAAAATGAAAGAAGATAATTACTAAAATCCATGATTGTCTCATTTGAGG
* *
39585 CACGAACATAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAGT
583 CACGAACATAGACATTATAAAAATTGGCGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAAT
*
39650 GTCGTGTAT
648 GTCATGTAT
39659 CCTTATGAGA
Statistics
Matches: 574, Mismatches: 76, Indels: 10
0.87 0.12 0.02
Matches are distributed among these distances:
787 1 0.00
788 308 0.54
789 1 0.00
790 5 0.01
791 166 0.29
792 93 0.16
ACGTcount: A:0.37, C:0.15, G:0.18, T:0.30
Consensus pattern (791 bp):
AATAAAAGCACCAATATAATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
GAAAAAAGATCATTACTAGAATGCATGTTTGTACCAATTGAGGCACAAACTTACACAATACAAAA
ATTGGTAGGAAGAAAGCCTGTCTTACGAAACCAAAGCATCAATATCATCTATCATAATGAGAAGA
CTATGTTTATGGTACCTAATCCAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTAT
TTAAAAGAAAAACTTGGATTCTAACAAAACGGTTGAAAGAACACTTTTCTTACGACACCAAACCA
TCAATATCATATATCCTAATGAAGAGAATGTATTTTTGGTTCCCAATCTAGAAAAGAAAGGAGAC
TGTTATGAGAATCAATGCTTACCTTATTTAAGGGATAAACTTTCATTTTAAGGAAAATAGGGCAA
AAGAAACATTTCCATGCAAAAGAAAAACATCAATATCATTTACCCTAATAAGGAGAACTTGTTTA
TAGTGCCCAATCACAAAATGAAAGAAGATAATTACTAAAATCCATGATTGTCTCATTTGAGGCAC
GAACATAGACATTATAAAAATTGGCGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATGTC
ATGTATGCTAATGAAGGAAATGGGTTTATGGTACCCAATCTTAAAATTAATGGAGACTGTTATAA
GAATCAATACCTTCCTTATTTAAGGGATGAACTTTGATTTTAAAGAAAATAAGGTAAAGGAAACA
TTTCTAGACAG
Found at i:39921 original size:476 final size:475
Alignment explanation
Indices: 38831--40610 Score: 2118
Period size: 476 Copynumber: 3.8 Consensus size: 475
38821 TGGCGGGAAG
* * * * * *
38831 AAAGCCTTTCTTGCGACACCAAAGCTTCAATGTCATGTATGCTAATGAAGGAAATGGGTTTATGG
1 AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGG
* ** * *
38896 TACCCAATCTT-AAAATTAATGGAGACTGTTATAAGAATCAATACCTT-CCTTATTTAAGGGATG
66 TACCCAATCTTGAAAA-GAATGGAGACTGTTACGAGAATCAAT-GCTTACATTATTTAAGGGATG
* * * * * * * * *
38959 AACTTTGATTTTAAAGAAAATAAGGTAAAGGAAACATTTCTA-GACAGAATAAAAGCACCAATAT
129 AACTTTGATTTTAATGAAAATAGGGCAAAAGAAACATTTCCATG-CAAAAGAAAATCATCAATAT
* * *
39023 CATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCCCAAAATGAATGAAGATCATTACT
193 CATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGATCATTACT
* * * * *
39088 AGAAT-CATGTTTGACTAATTGGAGGCACGGACTTACACTTTACAAAAATTGGTAGGAAGAAAGC
258 AGAATCCATGATTGACTCATTTGAGGCACGAACTTACACATTACAAAAATTGGTAGGAAGAAAGC
** * * *
39152 CTTTCTTATGAAACCAAAGCATCAATATCATGTATCATTATGAGAAGACTATGTTTTTGGTACCT
323 CTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTTTATGGTGCCT
* * * *
39217 AATCCAGAAAGGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAAAGACAAACTTGG
388 AATCCTGAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAAAGACAAACTTTG
** *
39282 ATTCTAGCAAAAACGGTT---GA
453 ATTCTAAAAAAAATGGTTAAAGA
* *
39302 AAGAGC-TTTCTTACGACACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTGTTTTTG
1 AA-AGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTG
** * * * * *
39366 GTTTCCAATTTTGAAAAGAAAGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGA
65 GTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTACATTATTTAAGGGATGA
* * *
39431 ACTTTCATTTTAATGAAAATAGGGCAAAAGAAACATTTCCATGCGAAAGAAAAACATCAATATCA
130 ACTTTGATTTTAATGAAAATAGGGCAAAAGAAACATTTCCATGCAAAAGAAAATCATCAATATCA
* * * * * * *
39496 TTTACCCTAATGAGGATAATGTGTTTATAGTGCCTAATCAGAAAATTAAAGAAGATAATTTCTTG
195 TTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGATCATTACTAG
* * * * *
39561 AATCCATGATTGTCTCATTTGAGGCACGAACATAGACATTATAAAAATTGGTGGGAAGAAAGCCT
260 AATCCATGATTGACTCATTTGAGGCACGAACTTACACATTACAAAAATTGGTAGGAAGAAAGCCT
* * * *
39626 TTCTTGCGAAACCAAAGCATCAGTGTCGTGTATCCTTATGAGAGGACTATGTTTATGGTGCCTAA
325 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAA
* * * * * * * * *
39691 TCTTGAAAAGACTAAGGATTAATTTGAGTATTCGTGTTTGTCTTATTTTAGAGACAAACTTTGAT
390 TCCTGAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAAAGACAAACTTTGAT
* *
39756 TCTAATAAAATTGGTTAAAAGA
455 TCTAAAAAAAATGGTT-AAAGA
*
39778 AAAGCTTTTCTTGCGACACCAAAGCATCAATCTCATGTATCCTAATGAAGGGAATGTGTTTTTGG
1 AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGG
*
39843 TACCCAATCTTGAAATGAATGGAGACTGTTACGAGAATCAATGCTTACATTATTTAAGGGATGAA
66 TACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTACATTATTTAAGGGATGAA
* * *
39908 CTTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATAAAATCATCAATGTCAT
131 CTTTGATTTTAATGAAAATAGGGCAAAAGAAACATTTCCATGCAAAAGAAAATCATCAATATCAT
* * * *
39973 TTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGGATGAAGATCATTTCTAGA
196 TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGATCATTACTAGA
* * * **
40038 ATCCATGTTTGACACATTTGAGGCAAGAACTTACATTTTACAAAAATTGGTAGGAAGAAAGCCTT
261 ATCCATGATTGACTCATTTGAGGCACGAACTTACACATTACAAAAATTGGTAGGAAGAAAGCCTT
* * * * *
40103 TCTTGCGTAACCAAAGCATCGATATCGTCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAAT
326 TCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAAT
* * * * * *
40168 CCTGAAAAGAATTGGGATTAGTGTGACAATTCTTGTTTGTCTTATTTAACAGAGCAAACTTTGGT
391 CCTGAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAAAGA-CAAACTTTGAT
40233 TCTATCAAAAACAATGG--AAAGA
455 TCTA--AAAAA-AATGGTTAAAGA
** * * * * *
40255 ATTGCTTTTCTTGCGACCCCAAAGCATCAATGTCATGTATACTAATGAATGGATTGTGTTCTTGG
1 AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGG
* * * * * * *
40320 TTCCGAATCTTGAAAAGAATGGAGTCTGCTACGAGAATCAATACTTATCA-TATTTGAGTGATGA
66 TACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTA-CATTATTTAAGGGATGA
* * *
40384 ACATTGA-TTTAAGGAAAATAGGGC-AAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATC
130 ACTTTGATTTTAATGAAAATAGGGCAAAAG-AAACATTTCCATGCAAAAGAAAATCATCAATATC
* * * *
40447 ATTTATCCTAATGAGGAAAATGTGTTTACAATGCCTAATTACAAAATG-AAGAAGATCATTACTA
194 ATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGATCATTACTA
** * * *
40511 GAATCCAT-ATTTTTCTCCTTTGAGGCACGAACTTACA-TTATACAAAAATTGGTTGGAAGAAAG
259 GAATCCATGA-TTGACTCATTTGAGGCACGAACTTACACAT-TACAAAAATTGGTAGGAAGAAAG
* * *
40574 CCTTT-TCTGCGACACCAAATCATCAATGTCATGTATC
322 CCTTTCT-TGCGAAACCAAAGCATCAATATCATGTATC
40611 TAATGAAGGG
Statistics
Matches: 1120, Mismatches: 170, Indels: 34
0.85 0.13 0.03
Matches are distributed among these distances:
470 3 0.00
471 212 0.19
472 179 0.16
474 3 0.00
475 100 0.09
476 478 0.43
477 135 0.12
478 2 0.00
479 4 0.00
480 4 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (475 bp):
AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGG
TACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTACATTATTTAAGGGATGAA
CTTTGATTTTAATGAAAATAGGGCAAAAGAAACATTTCCATGCAAAAGAAAATCATCAATATCAT
TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGATCATTACTAGA
ATCCATGATTGACTCATTTGAGGCACGAACTTACACATTACAAAAATTGGTAGGAAGAAAGCCTT
TCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAAT
CCTGAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAAAGACAAACTTTGATT
CTAAAAAAAATGGTTAAAGA
Found at i:40747 original size:315 final size:316
Alignment explanation
Indices: 40259--40909 Score: 882
Period size: 315 Copynumber: 2.1 Consensus size: 316
40249 GAAAGAATTG
* * * * *
40259 CTTTTCTTGCGACCCCAAAGCATCAATGTCATGTATACTAATGAATGGATTGTGTTCTTGGTTCC
1 CTTTTCTTGCGACACCAAAGCATCAATGTCATGTATACTAATGAAGGGAATGGGTTCTTGGTACC
* * * * * *
40324 GAATCTTGAAAAGAATGGAGTCTGCTACGAGAATCAATACTTATCATATTTGAGTGATGAACATT
66 CAATCTTGAAAAGAATAGAGACTGCTACGAGAATCAATACTTACCATATTTAAGGGATGAACATT
* *
40389 GATTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATC
131 GATTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTGACC
* * *
40454 CTAATGAGGAAAATGTGTTTACAATGCCTAATTACAAAATG-AAGAAGATCATTACTAGAATCCA
196 CTAATGAGGAAAATGTGTTTACAATGCCTAATCACAAAATGAAAGAAGATAAATACTAGAATCCA
* * * * *
40518 T-ATTTTTCTCCTTTGAGGCACGAACTT-ACATTATACAAAAATTGGTTGGAAGAAAGC
261 TGA-TTGTCTCATTTGAGGCACAAACTTAACATTATA-AAAAA-TGGTGGGAAAAAAGC
* *
40575 CTTTTC-TGCGACACCAAATCATCAATGTCATGTAT-CTAATGAAGGGAATGGGTTTTTGGTACC
1 CTTTTCTTGCGACACCAAAGCATCAATGTCATGTATACTAATGAAGGGAATGGGTTCTTGGTACC
* * * * *
40638 CAATCTTGAAAATAATAGAGACTGCTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTT
66 CAATCTTGAAAAGAATAGAGACTGCTACGAGAATCAATACTTACCATATTTAAGGGATGAACATT
* * *
40703 GATTTGAAGGAAAATAGGGCAAAGTAAATATTTCCATGCAAAAGACAATCATCAATATCATTGAC
131 GATTT-AAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTGAC
* * * *
40768 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGTTAAATACTAGAATCC
195 CCTAATGAGGAAAATGTGTTTACAATGCCTAATCACAAAATGAAAGAAGATAAATACTAGAATCC
*
40833 ATGATTGTCTCATTTGAGGCACAAACTTAGACTTTATAAAAAATGGTGGGAAAAAAGC
260 ATGATTGTCTCATTTGAGGCACAAACTTA-ACATTATAAAAAATGGTGGGAAAAAAGC
*
40891 C-TTTCTTGCGAAACCAAAG
1 CTTTTCTTGCGACACCAAAG
40910 TGTTAGGATC
Statistics
Matches: 291, Mismatches: 38, Indels: 12
0.85 0.11 0.04
Matches are distributed among these distances:
314 82 0.28
315 123 0.42
316 73 0.25
317 6 0.02
318 7 0.02
ACGTcount: A:0.37, C:0.15, G:0.18, T:0.29
Consensus pattern (316 bp):
CTTTTCTTGCGACACCAAAGCATCAATGTCATGTATACTAATGAAGGGAATGGGTTCTTGGTACC
CAATCTTGAAAAGAATAGAGACTGCTACGAGAATCAATACTTACCATATTTAAGGGATGAACATT
GATTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTGACC
CTAATGAGGAAAATGTGTTTACAATGCCTAATCACAAAATGAAAGAAGATAAATACTAGAATCCA
TGATTGTCTCATTTGAGGCACAAACTTAACATTATAAAAAATGGTGGGAAAAAAGC
Found at i:41222 original size:20 final size:20
Alignment explanation
Indices: 41199--41263 Score: 72
Period size: 20 Copynumber: 3.6 Consensus size: 20
41189 ACACCCAGAA
41199 GTATCGATACATTATGCCTT
1 GTATCGATACATTATGCCTT
41219 GTATCGATACA--A-----T
1 GTATCGATACATTATGCCTT
41232 GTATCGATACATTATGCCTT
1 GTATCGATACATTATGCCTT
*
41252 ATATCGATACAT
1 GTATCGATACAT
41264 GGACAATTGT
Statistics
Matches: 37, Mismatches: 1, Indels: 14
0.71 0.02 0.27
Matches are distributed among these distances:
13 12 0.32
15 1 0.03
18 1 0.03
20 23 0.62
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (20 bp):
GTATCGATACATTATGCCTT
Found at i:41236 original size:13 final size:13
Alignment explanation
Indices: 41218--41242 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
41208 CATTATGCCT
41218 TGTATCGATACAA
1 TGTATCGATACAA
41231 TGTATCGATACA
1 TGTATCGATACA
41243 TTATGCCTTA
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:41241 original size:33 final size:33
Alignment explanation
Indices: 41199--41262 Score: 119
Period size: 33 Copynumber: 1.9 Consensus size: 33
41189 ACACCCAGAA
*
41199 GTATCGATACATTATGCCTTGTATCGATACAAT
1 GTATCGATACATTATGCCTTATATCGATACAAT
41232 GTATCGATACATTATGCCTTATATCGATACA
1 GTATCGATACATTATGCCTTATATCGATACA
41263 TGGACAATTG
Statistics
Matches: 30, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
33 30 1.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (33 bp):
GTATCGATACATTATGCCTTATATCGATACAAT
Found at i:41339 original size:20 final size:20
Alignment explanation
Indices: 41314--41351 Score: 58
Period size: 20 Copynumber: 1.9 Consensus size: 20
41304 TATCACTGTT
*
41314 TGTATCGATACATGGTATAA
1 TGTATCAATACATGGTATAA
*
41334 TGTATCAATACATTGTAT
1 TGTATCAATACATGGTAT
41352 CGATACATGA
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
20 16 1.00
ACGTcount: A:0.34, C:0.11, G:0.16, T:0.39
Consensus pattern (20 bp):
TGTATCAATACATGGTATAA
Found at i:41350 original size:33 final size:33
Alignment explanation
Indices: 41313--41379 Score: 109
Period size: 33 Copynumber: 2.0 Consensus size: 33
41303 CTATCACTGT
*
41313 TTGTATCGATACATGGT-ATAATGTATCAATACA
1 TTGTATCGATACATGATGA-AATGTATCAATACA
41346 TTGTATCGATACATGATGAAATGTATCAATACA
1 TTGTATCGATACATGATGAAATGTATCAATACA
41379 T
1 T
41380 AGCTTGTAAC
Statistics
Matches: 32, Mismatches: 1, Indels: 2
0.91 0.03 0.06
Matches are distributed among these distances:
33 31 0.97
34 1 0.03
ACGTcount: A:0.37, C:0.12, G:0.15, T:0.36
Consensus pattern (33 bp):
TTGTATCGATACATGATGAAATGTATCAATACA
Found at i:47551 original size:13 final size:13
Alignment explanation
Indices: 47533--47557 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
47523 CAACATTCCT
47533 TGTATCGATACAA
1 TGTATCGATACAA
47546 TGTATCGATACA
1 TGTATCGATACA
47558 TTGGGTACTA
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:48136 original size:22 final size:20
Alignment explanation
Indices: 48063--48136 Score: 59
Period size: 22 Copynumber: 3.8 Consensus size: 20
48053 TTTACATTTG
48063 ATTAAGGGGGAGAAATGCTTT
1 ATTAAGGGGGAGAAAT-CTTT
48084 GATTAAGGGGGAG-AA--TTT
1 -ATTAAGGGGGAGAAATCTTT
* *
48102 -TTAA-GAGAAGAAATTCTTT
1 ATTAAGGGGGAGAAA-TCTTT
48121 AATTAAGGGGGAGAAA
1 -ATTAAGGGGGAGAAA
48137 AACAAAAACT
Statistics
Matches: 41, Mismatches: 4, Indels: 14
0.69 0.07 0.24
Matches are distributed among these distances:
15 4 0.10
16 6 0.15
18 3 0.07
19 3 0.07
21 6 0.15
22 19 0.46
ACGTcount: A:0.39, C:0.03, G:0.31, T:0.27
Consensus pattern (20 bp):
ATTAAGGGGGAGAAATCTTT
Found at i:48700 original size:13 final size:13
Alignment explanation
Indices: 48682--48706 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
48672 CATTATGCCT
48682 TGTATCGATACAA
1 TGTATCGATACAA
48695 TGTATCGATACA
1 TGTATCGATACA
48707 TGTTTATTGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:48737 original size:20 final size:20
Alignment explanation
Indices: 48691--48747 Score: 64
Period size: 20 Copynumber: 3.0 Consensus size: 20
48681 TTGTATCGAT
48691 ACAA-TGTATCGATACAT-G
1 ACAATTGTATCGATACATGG
***
48709 TTTATTGTATCGATACATGG
1 ACAATTGTATCGATACATGG
*
48729 ACAATTGTATCAATACATG
1 ACAATTGTATCGATACATG
48748 AGATTGGCAG
Statistics
Matches: 30, Mismatches: 7, Indels: 2
0.77 0.18 0.05
Matches are distributed among these distances:
18 1 0.03
19 13 0.43
20 16 0.53
ACGTcount: A:0.35, C:0.14, G:0.16, T:0.35
Consensus pattern (20 bp):
ACAATTGTATCGATACATGG
Found at i:50330 original size:172 final size:172
Alignment explanation
Indices: 50012--50357 Score: 462
Period size: 172 Copynumber: 2.0 Consensus size: 172
50002 GTTTTACAAA
*
50012 AATTGGTGGGAAAAAAGCCTTTCTCGCGAAACCAAAGCATCAATATCACCTATCCTAATGAGAAG
1 AATTGGTGGGAAAAAAGCCTTTCTCGCAAAACCAAAGCATCAATATCACCTATCCTAATGAGAAG
* ** * * *
50077 ACTATGTTTATGGTGCCTAATCTTGAAAAGAATTGGGATTAGTGTTACTGTTCTTGTTTGTCTTA
66 ACTACGTTTATGGTGCCTAATCTTGAAAAGAATAAGGATTAATGTTACTATTCGTGTTTGTCTTA
*
50142 TTTAAAAGAGCAAACTTTGATTTGATTAAAAATGGTGGAAAG
131 TTTAAAAGAGCAAACTTTGATTTGAATAAAAATGGTGGAAAG
* * * *** *
50184 AATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAATGCATCAATATCGTGTATCCTTATGAGAAG
1 AATTGGTGGGAAAAAAGCCTTTCTCGCAAAACCAAAGCATCAATATCACCTATCCTAATGAGAAG
* *
50249 ACCTACGTTTATGGTGCCTAATCTTGAAAAGACTAAGGATTAAT-TTGAGTATTCGTGTTTGTCT
66 A-CTACGTTTATGGTGCCTAATCTTGAAAAGAATAAGGATTAATGTT-ACTATTCGTGTTTGTCT
* * * * *
50313 TATTTTAGAGA-CAAACTTTGATTTTAATAAAATTGGTTGAAAG
129 TATTTAAAAGAGCAAACTTTGATTTGAATAAAAATGGTGGAAAG
50356 AA
1 AA
50358 AAGCTTTTCT
Statistics
Matches: 150, Mismatches: 22, Indels: 4
0.85 0.12 0.02
Matches are distributed among these distances:
172 90 0.60
173 60 0.40
ACGTcount: A:0.34, C:0.13, G:0.20, T:0.34
Consensus pattern (172 bp):
AATTGGTGGGAAAAAAGCCTTTCTCGCAAAACCAAAGCATCAATATCACCTATCCTAATGAGAAG
ACTACGTTTATGGTGCCTAATCTTGAAAAGAATAAGGATTAATGTTACTATTCGTGTTTGTCTTA
TTTAAAAGAGCAAACTTTGATTTGAATAAAAATGGTGGAAAG
Found at i:50498 original size:159 final size:158
Alignment explanation
Indices: 50326--58343 Score: 1619
Period size: 159 Copynumber: 50.7 Consensus size: 158
50316 TTTAGAGACA
* * *
50326 AACTTTGATTTTAATAAAATTGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGAATCAATCTC
1 AACTTTGATTTTAATAAAATTGG-TGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC
* *
50391 ATGTATCCTAATGAAGGGAATGTGTTTTTGGTACCTAATCTTGAAATGAATGGAGACTATTACGA
65 ATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTACGA
* *
50456 GAATCAATGCTTACGTTATTTAAGGGATG
130 GAATCAATGTTTTCGTTATTTAAGGGATG
* * * * * ** *
50485 AACTTTGATTTTAATGAAAATAGG-GCAAAGCAAA-CATTTCCATGCAAAATAAAATCATCAATA
1 AACTTTGATTTTAAT-AAAATTGGTG-AAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATA
* * * * *** * *
50548 TCTTTTATCCTAAT-TAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGGATGAAGA-TCATT
63 TCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-ATT
* * * * * * * *
50611 TCTAAAATCCATGTTTGAC-TCATTTAAGGCAAG
126 ACGAGAATCAATGTTT-TCGTTATTTAAGGGATG
** ** * * *
50644 AACTTACACATTACA-AAAATTGGTGGGAA-TAAAGCCTTTCTTGCGAAACCAAAG---------
1 AACTTTGATTTTA-ATAAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * * * * * * * * *
50698 --TGCATCCTTATG-AGACGACTATGTTTATGGTGCCAAATCCTGAAAAGAATGGCGATTAGTAT
64 CATGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTAC
* *
50760 GACTATTC-ATGTTTGTC-TTATTTAAGAGGCA--
128 GA-GAATCAATGTTT-TCGTTATTTAAG-GG-ATG
* ** ** ** ** **
50791 AACTTGGATACTAGCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACCCCAAAGCATCAATGCC
1 AACTTTGATTTTAATAAAATTGG-TGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC
* * * * * * * * *
50856 AAGTATCCGAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATAGAGTCTGTGTTAC
65 ATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGAC--TATTAC
* * * * * * *
50921 GAGAATCGAGGCTTGTC-ATACTTAAGTGAAG
128 GAGAATCAATG-TTTTCGTTATTTAAGGGATG
* * * * * ** ** *
50952 AATTTTGATTTTAACGAAAATAGG-GCAAAGTAAA-CTTTTCCATGTAAAATAAAATCATCAATA
1 AACTTTGATTTTAA-TAAAATTGGTG-AAAGAAAAGCTTTT-CTTGCGAAACCAAAGCATCAATA
* * * ** *
51015 TCATTTATCCTAATG-AGGAGAATTTGTTTATTGTGCCTAATC-ACAGAATGAATGAAGA-TCAT
63 TCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGA-AATGAATGGAGACT-AT
* * * * * * * **
51077 TCCTAGAATCCATGATTGTC-TCATTTGAGGCACA
125 TACGAGAATCAATG-TTTTCGTTATTTAAGGGATG
* * * * * * *
51111 AACTTAGACTTT-ATAAAAATTGGTGGGAAG-AAAGCCTTTCTTGTGACACCAAAGCATCAATGT
1 AACTTTGATTTTAAT-AAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * *
51174 CATGTAT-CTAATGAAGGGAATGGGTTTTTGGTACCCAATCTTGAAAAT-AATGGAGACTATTAT
64 CATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTG-AAATGAATGGAGACTATTAC
* *
51237 GAGAATCAATGTTTGCCTTATTTAAGGGATG
128 GAGAATCAATGTTTTCGTTATTTAAGGGATG
* * * * ** *
51268 AACTTTGATTTTAATGAAAATAGG-GCAAAGGAAA-CATTTCTATGCAAAATAAAATCATCAATA
1 AACTTTGATTTTAAT-AAAATTGGTG-AAAGAAAAGCTTTTCT-TGCGAAACCAAAGCATCAATA
* * *** * * * *
51331 TCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATCACAAAATTAAAGAAG-TTCATT
63 TCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-ATT
* * ** *
51394 TCTG-GAATCCATGTTTGTC-TCCTTTGAA-GTATG
126 AC-GAGAATCAATGTTT-TCGTTATTT-AAGGGATG
** * * * * *
51427 AACTTACATCTT-ACAAAATTGGTGGGAAG-CAAGCCTTTCTTGCGAAACCAAAGCATCAATATC
1 AACTTTGATTTTAATAAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC
* * * * * * * * * *
51490 GTCTATCCTAATGAGAAGG-CTATGTTTATGGTGCCTAATCCTGAAAAAGAATTGG-GATTAGTG
65 ATGTATCCTAATGA-AGGGAATGTGTTTATGGTGCCTAATCTTG-AAATGAA-TGGAGACTATTA
* * * * *
51553 TGACTATTC-TTGTTTGTC-TTATTTAAGAGA-G
127 CGA-GAATCAATGTTT-TCGTTATTTAAGGGATG
* * ** * * * * *
51584 CAAACTTTGATTCTAACAAAAACAGTTGAAAGAAAAGCTTTTCTTGCGACACCAATGCCTCAATG
1 --AACTTTGATTTTAA-TAAAATTGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATA
* * * * * * * * *
51649 TCTTGTATCCTAACGAAGGGAATGTATTTTTGGTTCCCAATATTGAAAAGAATGGAGACTGTTAC
63 TCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTAC
* * * *
51714 GAGAATCAATGCTTACCTTATTTAAGGGTTG
128 GAGAATCAATGTTTTCGTTATTTAAGGGATG
* * * * ** * *
51745 AACTTTGATTTTAATGAAAATAGG-GCAAAGGAAA-CATTTCCAT--GAAAATAAATCGTCAATA
1 AACTTTGATTTTAAT-AAAATTGGTG-AAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATA
* * * * * * * *
51806 TCGTTTATCCAAATG-AGAAGAATGTGTTTATTGTGCCTAATCATAAAATGAATGAAGA-TCATT
63 TCATGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-ATT
* * * * * *
51869 ACTAGAATCCATG-TTTGGCTCATTTGAGGCATG
126 ACGAGAATCAATGTTTTCG-TTATTTAAGGGATG
** * * * **
51902 AACTTACACTTT-ATAAAAATTGGTTGGAAG-AAAGCTTTGCTTGCGAAA-CAGAAGTGTCAATA
1 AACTTTGATTTTAAT-AAAATTGG-TGAAAGAAAAGCTTTTCTTGCGAAACCA-AAGCATCAATA
* * * * * * * *
51964 TCGTGTATCCTTATG-AGAAGACTATGTTTATGGTGCCTAATCCTGAAGA-GAAT-GAGGATTAG
63 TCATGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCTAATCTTGAA-ATGAATGGA-GACTAT
* * * * * **
52026 TATGACTATTC-ATGTTTGTC-TTATTTTAGAGACA
125 TACGA-GAATCAATGTTT-TCGTTATTTAAGGGATG
* * ** * * *
52060 AACTCTGATTCT-ATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGC-AACACCAAAACCTCAACA
1 AACTTTGATTTTAAT-AAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATA
* * * * * * * *
52123 TCATGTATTCTAATGAAGGTAATGTATTTTTGGTACCCAATCTTGAAATGAATGGAGATTGTTAC
63 TCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTAC
* * * *
52188 GAGAATCGATGCTGGTT--ATATTTATGGGATG
128 GAGAATCAATG-T-TTTCGTTATTTAAGGGATG
* * * ** * * ** *
52219 AATTTTGATTTTAACCAAAATAGG-GCAAAGAAAATATTTTCATGCAAAAAAAAAATCATCAATA
1 AACTTTGATTTTAA-TAAAATTGGTG-AAAGAAAAGCTTTTCTTGC-GAAACCAAAGCATCAATA
* * * * *** * *
52283 TCGTTTATCCTAATG-AGGAGAATGTGTTTATAGTACCTAATCACAAAATAAATAGAGA-TCATT
63 TCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-ATT
* * * * *
52346 ACTAGAATCTATGTTTTTC-TTCTTTGAGGGACG
126 ACGAGAATCAATG-TTTTCGTTATTTAAGGGATG
** * * * * * *
52379 AACTTACACTTTACA-AAAATTGGTTGGAAG-AAAGCCTTTCTTGCGACACCAAAGCTTCAATGT
1 AACTTTGATTTTA-ATAAAATTGG-TGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * *
52442 CATGTAT-CTAATGAAGGGCATGGGTTTTTGGTACCCAATCTTGAAAAT-AATGGAGACTATTAC
64 CATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTG-AAATGAATGGAGACTATTAC
* * * *
52505 AAGAATCAATGCTTGCCTTATTTAAGGGATG
128 GAGAATCAATGTTTTCGTTATTTAAGGGATG
* * * * * ** *
52536 AACTTT-ATTTTAAGGAAAATAGG-GCAATAG-AAA-CATTTCCATGCAAAAGAAAATCATCAAT
1 AACTTTGATTTTAA-TAAAATTGGTG-AA-AGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAAT
* * * *** * * * *
52597 ATCATTTACCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAG-TTAAA
62 ATCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-AT
* * * * * * *
52660 TACTAGAATCCATGATTGT-GTCATTTGAGGCACG
125 TACGAGAATCAATG-TTTTCGTTATTTAAGGGATG
* * * *
52694 AACTTAG-TCTTT-ATAAAAATTGGTGGGAAG-AAAGCCTTTCTTGCG-ACCCAAAGCATCAATA
1 AACTTTGAT-TTTAAT-AAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATA
* ** * * * * * * * * *
52755 TCATTTATCCTTCT-AAGAAGACTATGTTTATGTTACCTAATCCTGAAAGGAATGGGGATTAATT
63 TCATGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-ATT
* * * **
52819 -TGAGTATTC-ATGTTTGT-GTTATTTAAGAGACA
126 ACGAG-AATCAATGTTT-TCGTTATTTAAGGGATG
* * * * * *
52851 AACTTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTC
1 AACTTTGATTTTAATAAAATTGG-TGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC
* * * * * *
52916 ATGTATTCTAATGAGGGGAATGTGTTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTACGA
65 ATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTACGA
* *
52981 GAATCAATGTTTACCTTATTT-AGAGGATG
130 GAATCAATGTTTTCGTTATTTAAG-GGATG
* * * * * * ** * *
53010 AACTTTGA-TTT--T-AAATAGG-GCAAAGGAAA-CAATTCCATGCAAAATAAAATCATCAGTAT
1 AACTTTGATTTTAATAAAATTGGTG-AAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATAT
* * * ** *
53069 TATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATC-AAAAATTGAATGAAGA-TCATT
64 CATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAA-TGAATGGAGACT-ATT
* * * * * * * *
53131 ACCAAAATCCATGATTGTC-TCATTTGAGGCACG
126 ACGAGAATCAATG-TTTTCGTTATTTAAGGGATG
* * * * * * * *
53164 AACTTAGACTTT-ATAAAAATTGGTGGGAA-AAATGCTGTTCTTGCGAATCGAAAACATCAATAT
1 AACTTTGATTTTAAT-AAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * * * * * *
53227 -AGTATATCCTTATG-AGAAGACTATG-TTATGGTGCCTAATCCTGAAAAGAATGCAGAATAATT
64 CA-TGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-ATT
* * * *
53289 -TGAGTATTC-ATGTTTGTC-TTTTTTAAGAGA-G
126 ACGAG-AATCAATGTTT-TCGTTATTTAAGGGATG
* * ** * * * * * *
53320 AAACTTTGATTCTAACAAAAACAGTTGAAAGAAAAGCTTTTCTTGTGACATCAAAGAATCAACAT
1 -AACTTTGATTTTAA-TAAAATTGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * *
53385 CATGTATCCTAATGAAGGGAACGTGTTT-TGGGTACCCAATCTTGAATTGAATGGAGACTATTAC
64 CATGTATCCTAATGAAGGGAATGTGTTTAT-GGTGCCTAATCTTGAAATGAATGGAGACTATTAC
* *
53449 GAGAATCAATGCTTACGTTATTTACA-GGATG
128 GAGAATCAATGTTTTCGTTATTTA-AGGGATG
* * * * * * ** * **
53480 AACTTTGATTTTAATGAAAATAGG-GCGAAGGAAA-CATTTCCATGCAAAATAAAATCATTTATA
1 AACTTTGATTTTAAT-AAAATTGGTG-AAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATA
* * * ** ** *
53543 ACATTTATCCTAATG-AGGACAATGTGTTTATTATGCCTAATC-ACAAACTGAATGAAGA-TCAT
63 TCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAA-TGAATGGAGACT-AT
** * * * * *
53605 TATTAGAATCCATGTTTAACTCATT-TTTTAGGCACG
125 TACGAGAATCAATGTTT---TCGTTATTTAAGGGATG
* ** * * * ** *
53641 AACATACATTTTACA-AAAATTGGTGGGAAG-AAAGCCTTTCTAGCGAAACCAAAGTGTCAAAAT
1 AACTTTGATTTTA-ATAAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * * * * * * *
53704 CATGTATCCTTATG-AGAAGACTATGTTTACGGTGCCTAATCCTAAAAAGAAT-GAGGATTAGTA
64 CATGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGA-GACTATTA
* * * * * * **
53767 TGACTATTC-ACGTTTGTC-TTATTTTAGAGACA
127 CGA-GAATCAATGTTT-TCGTTATTTAAGGGATG
* * ** * * * *
53799 AACTCTGATTCT-ATCAAAAACGGAGGAAAGAAAAGCTTTTCTTAG-GACACCAAAACATCAATG
1 AACTTTGATTTTAAT-AAAATTGG-TGAAAGAAAAGCTTTTCTT-GCGAAACCAAAGCATCAATA
* * *
53862 TCATGTATCCTAATGAAGGGAATGTGTTTTTGGTATCC-AATCTTGAAATGAATGGAGACTGTTA
63 TCATGTATCCTAATGAAGGGAATGTGTTTATGGT-GCCTAATCTTGAAATGAATGGAGACTATTA
* * * *
53926 CGAGAATCGATGTTGGTC-ATATTTATGGGATG
127 CGAGAATCAATGTT-TTCGTTATTTAAGGGATG
* * * * * ** *
53958 AATTTTGATTTTAACTAAAATAGG-GCAAAGAAAAGATTTTCATGCAAAAAAAAATCATCAATAT
1 AACTTTGATTTTAA-TAAAATTGGTG-AAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * *** * * *
54022 CATTTATCCTAATGACGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATTATTACT
64 CATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTACG
* ** * * *
54087 AAAATCCTTGTTTGAC-TTATTTGAGGCATG
129 AGAATCAATGTTT-TCGTTATTTAAGGGATG
** * * * * *
54117 AACTTACACTTTACA-AAAATTGGTGGGAAG-AAAGCCTTTCTTGCAAAACCAAAGCCTCAATAT
1 AACTTTGATTTTA-ATAAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * ** ** * * *
54180 CGTCTATCCTAACTAGAA--GACTACGTTTATGGTGAATAATCTTGAAAAGAATAGG-GATTAGT
64 CATGTATCCTAA-T-GAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAAT-GGAGACTATT
* * * *
54242 ATGA-ATATTCAA-GTTTGAC-TTATTTACGAGAGA-A
126 ACGAGA-A-TCAATGTTT-TCGTTATTTA--AGGGATG
* * ** * * * ** * * * *
54276 AACTTTGATTCTAACAAAGACAGTTAAAAGAAAAGTTTTTCTTATGACACTAATGCATCAATGTC
1 AACTTTGATTTTAATAAA-ATTGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC
* * * ** * * * * *
54341 TTGTATCATAAAGAACAGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGA
65 ATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTACGA
* * * *
54406 GAATCAATGCTTACCTTATTTAAGGGTTG
130 GAATCAATGTTTTCGTTATTTAAGGGATG
* * * * ** * ** * *
54435 AACTTTGATTTTAATGAAAATAGG-GCAGAGGAAA-CATTTCCACGCAAAATAAAATCGTCAATA
1 AACTTTGATTTTAAT-AAAATTGGTG-AAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATA
* * * * *** * *
54498 TCGTTTATCCTAAT-AAGGAGAATATGTTTATTGTGCCTAATCACAAAATGAATGAATA-TCATT
63 TCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-ATT
** * * * * *
54561 AATAGAATCCATG--TTCGACTCATTTGAGGCACG
126 ACGAGAATCAATGTTTTCG--TTATTTAAGGGATG
** * * * **
54594 AACTTAAACTTT-ATAAAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAACCAAAGTGTCAATAT
1 AACTTTGATTTTAAT-AAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * ** * * * * * *
54657 CGTGTCTCCTTAA-G-AGAAGACTACGTTTGTGGTGCCTAATCCTGAAAAGAAT-AAGGATTAGT
64 CATGTATCC-TAATGAAG-GGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGA-GACTATT
* * * * * **
54719 ATGACTATTC-ATGTTTGTC-TTATTTTAGAGACA
126 ACGA-GAATCAATGTTT-TCGTTATTTAAGGGATG
* * * * * * ** **
54752 AACTCTGATTCTATAAGAAACAGT-G-GAAAGAAAAGCTTTACTTGCGACACCAAAACATTTACG
1 AACTTTGATT-T-TAATAAA-ATTGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATA
* * * * * * * *
54815 TCATGTATCCTAATGAAAGGAATGAGTTTTTGGTACCCAATCTTGAAATTAATGGAGATTGTTAC
63 TCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTAC
** * **
54880 GAGAATCAATGCTGGTC-ATATTTGTGGGATG
128 GAGAATCAATG-TTTTCGTTATTTAAGGGATG
* * * * * * * ** *
54911 AATTTTGATTTTAACTAAAATAAGG-CAAAGAAAAGATTTCCATGCAAAAAAAAAATCATCAATA
1 AACTTTGATTTTAA-TAAAAT-TGGTGAAAGAAAAGCTTTTCTTGC-GAAACCAAAGCATCAATA
* * *** ** *
54975 TCATTTATCCTAAT-AAGGAGAATGTGTTTATAGTGCCTAATCAAAAAATGAATAAAGA-TCGTT
63 TCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-ATT
* * ** * * * *
55038 ACTAAAATCCTTGTTTGAC-TCATTTGAGGCATG
126 ACGAGAATCAATGTTT-TCGTTATTTAAGGGATG
** * * *
55071 AACTTACACTTTACA-AAAATTGGTGGCAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATAT
1 AACTTTGATTTTA-ATAAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * ** * *
55134 CATCTATCCTAACTAGAA--GACTACGTTTATGGTGCCTAATCTTGTAAA-GAATAGG-GATTAG
64 CATGTATCCTAA-T-GAAGGGAATGTGTTTATGGTGCCTAATCTTG-AAATGAAT-GGAGACTAT
* * * *
55195 TATGACTATTCAA-GTTTGAC-TTATTT-AGGAGA-G
125 TACGA-GAATCAATGTTT-TCGTTATTTAAGG-GATG
* * * * * * *
55228 CAAACTTTGATTCTAACAAAAATAGTTGAAAAAAAAGCTTTTCTTGCGACACCAATGCATCAATA
1 --AACTTTGATTTTAA-TAAAATTGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATA
* * * * * * * *
55293 TCTTGTATCCTAGA-GAAGGAAAAGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTA
63 TCATGTATCCTA-ATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTA
* * *
55357 CGAGAATCAACGCTTATC-TTATTTAAGGGTTG
127 CGAGAATCAATG-TTTTCGTTATTTAAGGGATG
* * * * *
55389 AACTTTGATTTTAATGAAAATAGG-GCAAAGGAAA-CATTTCCATGCAAAACCAAAGCATCAATA
1 AACTTTGATTTTAAT-AAAATTGGTG-AAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATA
** * * * ** * * * * *
55452 TTGTGTATCCTTTAT-AAGAAGACTACGTTTATGGTGCCTAATCCTAAAAAGAAT-GACGATTAG
63 TCATGTATCC-TAATGAAG-GGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGA-GACTAT
* ** ** ** **
55515 TATG-GCTGTTTATGTTTGTC-TTATTTAAAAGACA
125 TACGAG-AATCAATGTTT-TCGTTATTTAAGGGATG
* * * * *
55549 AACTCTGATTCT-ATCGAAAA-CGATGGAAAGAAAAGCTTTTCTTG-TAACACCAAAGCATCAAT
1 AACTTTGATTTTAAT--AAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAAT
* * * * * * *
55611 GTCATATATCCTAAT-----G--TGTCTTTA--GTTCCCAATCTTGAAAAT-AATGGGGACTCTT
62 ATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTG-AAATGAATGGAGACTATT
* * * *
55666 ACGAGAGTCAATGCTTGCCTTATTTAAGGGATG
126 ACGAGAATCAATGTTTTCGTTATTTAAGGGATG
* * * * ** *
55699 AACTTTGATTTTAAGGAAAATAGG-GCAAACG-AAA-CATTTCCATT-CAAAAGAAAATCATCAA
1 AACTTTGATTTTAA-TAAAATTGGTG-AAA-GAAAAGC-TTTTC-TTGCGAAACCAAAGCATCAA
* * * * * ** * *
55760 TATCATTTACCCTAATG-TGGAGAATGTGTTTATAGTG-TTAATCACGAACTGAATGGGGA-TCA
61 TATCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-A
* * * * * *
55822 TTATTG-GAGTCCATGATTGTC-TCT-TTTAAGGCACG
124 TTA-CGAGAATCAATG-TTTTCGT-TATTTAAGGGATG
* * * * * *
55857 AACTTAGACTTT-ATAAAAATTAGAGAGAAG-AAAGCCTTTCTTGTGAAACCAAAGCATCAATAT
1 AACTTTGATTTTAAT-AAAATTGGTGA-AAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * ** ** * *
55920 CATGTATCCTTATG-AGAAGACTTTGTTTATGGTGAATAATCTTGAAATGTTTGGGGATTCATT-
64 CATGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-ATTA
* * * * * * **
55983 TGAGTATTC-AGGTTTGTC-CTATTTGAGAGACA
127 CGAG-AATCAATGTTT-TCGTTATTTAAGGGATG
* ** * * * * * *
56015 AACTTTGATTCTAATAAAAAACAGTTGAAAGAAAAGCATTTCTTGTGACATCAAAGCATCAAT-G
1 AACTTTGATTTTAAT--AAAATTGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * *
56079 CATTGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC-AATCTTGAAATGAATAGAGACTGTTAC
64 CA-TGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTAC
* * * * *
56143 GAGAATCAATGCTTACCTTCTTTAAGGGTTG
128 GAGAATCAATGTTTTCGTTATTTAAGGGATG
* * * * * * * * * ** * *
56174 AACTTTGATTCTAAAGAAAATAAGG-CAGAGGAAA-CATTTCCATGCAAAATAAAATCGTCAATA
1 AACTTTGATT-TTAATAAAAT-TGGTGAAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATA
** * *** *
56237 TCAT-TCATCCTAGCG-AGGAGAATGTGTTTATTGTGCCTAATCACAAAATAAAT-GATGA-TCA
63 TCATGT-ATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGA-GACT-A
** * * * * *
56298 TTAATAGAATCCATGTTTGAC-TCT-TTTGAGGCACG
124 TTACGAGAATCAATGTTT-TCGT-TATTTAAGGGATG
* ** * * * * *
56333 AACATACA-CTTACA-AAAATTGGTGGGAAGAAACGC-TTTCTTGTGAAACCAAAGCGTCAATAT
1 AACTTTGATTTTA-ATAAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * * * * * * * * * *
56395 CGTGAATCCTTATG-AGAAGACTATGTTTGTGGTGCCTAATCCTGAAAAGAATGGGGATTAGTAT
64 CATGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTAC
* * **
56459 GACG-ATCCATGTTTGTC-TTATTTAAGAGACA
128 GA-GAATCAATGTTT-TCGTTATTTAAGGGATG
* * ** * * ** * *
56490 AACTTGGATTCTAGCA-AAAACAGTTAAAAGAAAAGCTTTTCTTGCGACCCCAGAGCATCAATGT
1 AACTTTGATTTTA--ATAAAATTGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * * *
56554 CA-GCTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAATGTTAC
64 CATG-TATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTAC
* * *
56618 GAGAATCAATGCTTCCCTTATTTAAGGGATG
128 GAGAATCAATGTTTTCGTTATTTAAGGGATG
* * * * ** ** * *
56649 AACTTTGATTTTAAGGAAAATATGG-CAAAGGAAA-CATTTCCAAGC-AAAAAAAATCACCAATA
1 AACTTTGATTTTAA-TAAAAT-TGGTGAAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATA
* * * *** *
56711 TCATTTACCCTAAT-AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA-TCATT
63 TCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-ATT
* * * * * * *
56774 ACTAGAATCCATGTTTGTC-TCATCTGAGGCACG
126 ACGAGAATCAATGTTT-TCGTTATTTAAGGGATG
* * * * * * *
56807 AACTTAGACATTATAA-AAAA-TGGTGGGAA-CAAATCCTTTCTTGCGAAACCAAAGTGAT-AAT
1 AACTTTG--ATTTTAATAAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAG-CATCAAT
* * ** * * * * * * * *
56868 ATCGTGTATCCTTATGAAAAG-A-CTGTTTATGGCGCCTAATCCTAAAAAGAATGGGGATTACTA
62 ATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTA
* * * * * **
56931 TGACTATTC-ATGTTTGTC-TTATTAAAGAGACA
127 CGA-GAATCAATGTTT-TCGTTATTTAAGGGATG
* ** *
56963 AACTTTGATTCT-ATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC-AACACCAGAGCATCAATA
1 AACTTTGATTTTAAT-AAAATTGG-TGAAAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATA
* * * * * * * ** *
57026 TCATGTATCATAATGAAGGGAATGCGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGGTAT
63 TCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTAC
* ** * *
57091 GAGAATCAACGCATGCCTTATTTAAGGGATG
128 GAGAATCAATGTTTTCGTTATTTAAGGGATG
* * * * * * * * ** *
57122 AA-TATTGATTTCAAGGAAAATAAGG-CAAAGGAAA-CATTTCCGTGCAAAAGAAAATCATCAAT
1 AACT-TTGATTTTAA-TAAAAT-TGGTGAAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAAT
* * * * *** * * *
57184 ATCATTTACCCTCATG-AGGAGAATGTGTTTATAGTGCCTAATCACAAAATTAATGAAGACCATT
62 ATCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATT
* ** * * * **
57248 ACTAGAATCCTTGTTTGTC-TCATTTGAGGCACA
126 ACGAGAATCAATGTTT-TCGTTATTTAAGGGATG
* ** * * ** *
57281 AACTTAGACATT-ATAAAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAACCAAAGTGTCAGTAT
1 AACTTTGATTTTAAT-AAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * * * ** * * *
57344 CATGTATCCTTACGTGAA--GACTATGTTTACGATGCCTAATCCTGAAAACAATGGGGATTAGTA
64 CATGTATCC-TA-ATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTA
* * * * * * **
57407 TGACTATTCATAT-TTGTC-TTATTAAAGAGACA
127 CGA-GAATCA-ATGTTTTCGTTATTTAAGGGATG
* ** * * * * * *
57439 AACTTTGATTCT-ATCAAAAACAGTTGAAAGAAAAGCTTTTCTTACGACACCAAAGGATCAGTGT
1 AACTTTGATTTTAAT--AAAATTGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * ** * *
57503 CATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCAAGAAAAGAATGGAGACTGTTACG
64 CATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTACG
* * ** * *
57568 AGAATCAACGCTGGCCTTATTTAAGTGATG
129 AGAATCAATGTTTTCGTTATTTAAGGGATG
* ** * * * ** *
57598 AAATTTGATTTTGAGGAAAATAGG-GCAAAGGAAACA-C-TTTCATGCAAAAGAAAATCATCAAT
1 AACTTTGATTTT-AATAAAATTGGTG-AAA-GAAA-AGCTTTTCTTGCGAAACCAAAGCATCAAT
* * * * * * *** *
57660 ATCATTTACCCTAATTGCAGAGAATGTGTTTAT-ATCACCTAATCACAAAATGAATGAAGATCT-
62 ATCATGTATCCTAA-TGAAGGGAATGTGTTTATGGT-GCCTAATCTTGAAATGAATGGAGA-CTA
* * * * * *
57723 TTACTAGAATCCATGTTTGTC-TCATTTGAGGCACG
124 TTACGAGAATCAATGTTT-TCGTTATTTAAGGGATG
* ** * * * *
57758 AACTTAGACATT-ATAAAAATTGGTGGGAAG-AAAGCCTTTATT-CTGAAACCAAAGCGTCAATA
1 AACTTTGATTTTAAT-AAAATTGGT-GAAAGAAAAGCTTTTCTTGC-GAAACCAAAGCATCAATA
* ** * * * * ** * *
57820 TCATGTATCCTTATG-AGAAAACTATGTTTATGATGCCTAATCCTAAAAACAAT-GAGGATTAGT
63 TCATGTATCCTAATGAAGGGAA-TGTGTTTATGGTGCCTAATCTTGAAATGAATGGA-GACTATT
* * * * * **
57883 ATGACTATTC-ATGTTTATC-TTATTCAAGAGACA
126 ACGA-GAATCAATGTTT-TCGTTATTTAAGGGATG
* * * **
57916 AACTTTGATTCT-ATCAAAAGTGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGC
1 AACTTTGATTTTAAT-AAAATTGG-TGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * *
57980 CATGTATCCTAATGAAGGGAATGTGTTCT-TGGTTCCCAATCTTGAAAAGATTGGAGACTGTTAC
64 CATGTATCCTAATGAAGGGAATGTGTT-TATGGTGCCTAATCTTGAAATGAATGGAGACTATTAC
* * *
58044 GAGAATCAATGCTTACCTTATTTAAGGGATG
128 GAGAATCAATGTTTTCGTTATTTAAGGGATG
* * * * * * ** *
58075 AACTTTGATTTTAAGGAAAATAGG-GCAAAGGAAA-CATTTCCATGCAAAATAAAATCATCAATA
1 AACTTTGATTTTAA-TAAAATTGGTG-AAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATA
* * * *** *
58138 TCATTTTTCCTAATG-AGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAATGAAGA-TCATT
63 TCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACT-ATT
* * * * **
58201 ACTAGAATCTATGTTTGAC-TTATTTAAGGCACA
126 ACGAGAATCAATGTTT-TCGTTATTTAAGGGATG
** * * * *
58234 AACTTACACTTTACA-AAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAACTAAAGCATCAATAT
1 AACTTTGATTTTA-ATAAAATTGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATAT
* * * * * *
58297 CGTCTATCCTAATG-AGAAGACTATGTTTATGGGGCCTAATCTTGAAA
64 CATGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCTAATCTTGAAA
58344 AGATTGGGGA
Statistics
Matches: 5503, Mismatches: 1865, Indels: 983
0.66 0.22 0.12
Matches are distributed among these distances:
147 75 0.01
148 27 0.00
149 4 0.00
150 82 0.01
151 12 0.00
152 5 0.00
153 9 0.00
154 95 0.02
155 20 0.00
156 113 0.02
157 715 0.13
158 1335 0.24
159 1994 0.36
160 797 0.14
161 207 0.04
162 13 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (158 bp):
AACTTTGATTTTAATAAAATTGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCA
TGTATCCTAATGAAGGGAATGTGTTTATGGTGCCTAATCTTGAAATGAATGGAGACTATTACGAG
AATCAATGTTTTCGTTATTTAAGGGATG
Found at i:51131 original size:467 final size:465
Alignment explanation
Indices: 50235--51164 Score: 1249
Period size: 467 Copynumber: 2.0 Consensus size: 465
50225 AATATCGTGT
* * * * *
50235 ATCCTTATGAGAAGACCTACGTTTATGGTGCCTAATCTTGAAAAGACTAAGGATTAATTTGAGTA
1 ATCCTTATGAGAAGACCTACGTTTATGGTGCCAAATCCTGAAAAGAATAAGGATTAATATGACTA
* * * ** * **
50300 TTCGTGTTTGTCTTATTTTAGAGACAAACTTTGATTTTAATAAAATTGGTTGAAAGAAAAGCTTT
66 TTCATGTTTGTCTTATTTAAGAGACAAACTTGGATACTAACAAAAACGGTTGAAAGAAAAGCTTT
* * *
50365 TCTTGCGACACCAAAGAATCAATCTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTACCTAAT
131 TCTTGCGACACCAAAGAATCAATCTCAAGTATCCGAATGAAGGGAATGTGTTTTTGGTACCCAAT
* * * * *
50430 CTTGAAATGAATGGAGACTATTACGAGAATCAATGCTTACGTTATTTAAGGGATGAACTTTGATT
196 CTTGAAAAGAATAGAGACTATTACGAGAATCAAGGCTTA-GTTACTTAAGGGAAGAACTTTGATT
* *
50495 TTAATGAAAATAGGGCAAAGCAAACATTTCCATGCAAAATAAAATCATCAATATCTTTTATCCTA
260 TTAACGAAAATAGGGCAAAGCAAACATTTCCATGCAAAATAAAATCATCAATATCATTTATCCTA
* * * *
50560 ATTAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGGATGAAGATCATTTCTAAAATCCATGT
325 ATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTCCTAAAATCCATGA
*
50625 TTGACTCATTTAAGGCAAGAACTTACACATTACAAAAATTGGTGGGAATAAAGCCTTTCTTGCGA
390 TTGACTCATTTAAGGCAAGAACTTACACATTACAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGA
50690 AACCAAAGTGC
455 AACCAAAGTGC
* * * *
50701 ATCCTTATGAGACGA-CTATGTTTATGGTGCCAAATCCTGAAAAGAAT-GGCGATTAGTATGACT
1 ATCCTTATGAGAAGACCTACGTTTATGGTGCCAAATCCTGAAAAGAATAAG-GATTAATATGACT
* *
50764 ATTCATGTTTGTCTTATTTAAGAGGCAAACTTGGATACTAGCAAAAACGGTTGAAAGAAAAGCTT
65 ATTCATGTTTGTCTTATTTAAGAGACAAACTTGGATACTAACAAAAACGGTTGAAAGAAAAGCTT
* * *
50829 TTCTTGCGACCCCAAAGCATCAATGC-CAAGTATCCGAATGAAGGGAATGTGTTTTTGGTTCCCA
130 TTCTTGCGACACCAAAGAATCAAT-CTCAAGTATCCGAATGAAGGGAATGTGTTTTTGGTACCCA
* * * * *
50893 ATCTTGAAAAGAATAGAGTCTGTGTTACGAGAATCGAGGCTT-GTCATACTTAAGTGAAGAATTT
194 ATCTTGAAAAGAATAGAGAC--TATTACGAGAATCAAGGCTTAGT--TACTTAAGGGAAGAACTT
* * *
50957 TGATTTTAACGAAAATAGGGCAAAGTAAACTTTTCCATGTAAAATAAAATCATCAATATCATTTA
255 TGATTTTAACGAAAATAGGGCAAAGCAAACATTTCCATGCAAAATAAAATCATCAATATCATTTA
* * * *
51022 TCCTAATGAGGAGAATTTGTTTATTGTGCCTAATCACAGAATGAATGAAGATCATTCCTAGAATC
320 TCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTCCTAAAATC
* * * * *
51087 CATGATTGTCTCATTTGAGGCACA-AACTTAGACTTTATAAAAATTGGTGGGAAGAAAGCCTTTC
385 CATGATTGACTCATTTAAGGCA-AGAACTTACACATTACAAAAATTGGTGGGAAGAAAGCCTTTC
* *
51151 TTGTGACACCAAAG
449 TTGCGAAACCAAAG
51165 CATCAATGTC
Statistics
Matches: 401, Mismatches: 56, Indels: 13
0.85 0.12 0.03
Matches are distributed among these distances:
464 1 0.00
465 168 0.42
466 15 0.04
467 216 0.54
468 1 0.00
ACGTcount: A:0.35, C:0.15, G:0.19, T:0.32
Consensus pattern (465 bp):
ATCCTTATGAGAAGACCTACGTTTATGGTGCCAAATCCTGAAAAGAATAAGGATTAATATGACTA
TTCATGTTTGTCTTATTTAAGAGACAAACTTGGATACTAACAAAAACGGTTGAAAGAAAAGCTTT
TCTTGCGACACCAAAGAATCAATCTCAAGTATCCGAATGAAGGGAATGTGTTTTTGGTACCCAAT
CTTGAAAAGAATAGAGACTATTACGAGAATCAAGGCTTAGTTACTTAAGGGAAGAACTTTGATTT
TAACGAAAATAGGGCAAAGCAAACATTTCCATGCAAAATAAAATCATCAATATCATTTATCCTAA
TGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTCCTAAAATCCATGAT
TGACTCATTTAAGGCAAGAACTTACACATTACAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAA
ACCAAAGTGC
Found at i:52530 original size:791 final size:784
Alignment explanation
Indices: 51608--53209 Score: 2125
Period size: 791 Copynumber: 2.0 Consensus size: 784
51598 AACAAAAACA
* * * *
51608 GTTGAAAGAAAAGCTTTTCTTGCGACACCAATGCCTCAATGTCTTGTATCCTAACGAAGGGAATG
1 GTTGGAAG-AAAGCCTTTCTTGCGACACCAAAGCCTCAATGTCATGTATCCTAACGAAGGGAATG
* * * *
51673 TATTTTTGGTTCCCAATATTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTACCTTATTTA
65 GATTTTTGGTACCCAATATTGAAAAGAATGGAGACTATTACAAGAATCAATGCTTACCTTATTTA
* * * *
51738 AGGGTTGAACTTTGATTTTAATGAAAATAGGGCAA-AGGAAACATTTCCATG-AAAA-TAAATCG
130 AGGGATGAACTTT-ATTTTAAGGAAAATAGGGCAATA-GAAACATTTCCATGCAAAAGAAAATCA
* * * * *
51800 TCAATATCGTTTATCCAAATGAGAAGAATGTGTTTATTGTGCCTAATCATAAAATGAATGAAGAT
193 TCAATATCATTTACCCAAATGAGAAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGAT
* * * * *
51865 CATTACTAGAATCCATGTTTG-GCTCATTTGAGGCATGAACTTACACTTTATAAAAATTGGTTGG
258 AAATACTAGAATCCATGATTGTG-TCATTTGAGGCACGAACTTACACTTTATAAAAATTGGTGGG
** * *
51929 AAGAAAG-CTTTGCTTGCGAAACAGAAGTGTCAATATCGTGTATCCTTATGAGAAGACTATGTTT
322 AAGAAAGCCTTT-CTTGCGAAACA-AAGCATCAATATCATGTATCCTTATAAGAAGACTATGTTT
* * *
51993 ATGGTGCCTAATCCTG-AAGAGAATGAGGATTAGTATGACTATTCATGTTTGTCTTATTTTAGAG
385 ATGGTACCTAATCCTGAAAG-GAATGAGGATTAATATGACTATTCATGTTTGTCTTATTTAAGAG
* *
52057 ACAAACTCTGATTCTATCAAAAACGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAACCTCAAC
449 ACAAACTCTGATTCTAACAAAAACGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAACATCAAC
* *
52122 ATCATGTATTCTAATGAAGGTAATGTATTTTTGGTACCCAATCTTGAAATGAATGGAGATTGTTA
514 ATCATGTATTCTAATGAAGGGAATGTATTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTA
* *
52187 CGAGAATCGATGCTGGTTA-TATTTATG-GGATGAATTTTGATTTTAACCAAAATAGGGCAAAGA
579 CGAGAATCAATG-T--TTACTATTTA-GAGGATGAACTTTGATTTT-----AAATAGGGCAAAGA
* * * *
52250 AAATATTTTCATGCAAAAAAAAAATCATCAATATCGTTTATCCTAATGAGGAGAATGTGTTTATA
635 AAACAATTCCATGC-AAAAAAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATA
* * * * * *
52315 GTACCTAATCACAAAA-TAAAT-AGAGATCATTACTAGAATCTATGTTTTTCTTC-TTTGAGGGA
699 GTACCTAATCA-AAAATTAAATGA-AGATCATTACCAAAATCCATGATTGTC-TCATTTGAGGCA
52377 CGAACTTACACTTTACAAAAATTG
761 CGAACTTACACTTTACAAAAATTG
* * *
52401 GTTGGAAGAAAGCCTTTCTTGCGACACCAAAGCTTCAATGTCATGTAT-CTAATGAAGGGCATGG
1 GTTGGAAGAAAGCCTTTCTTGCGACACCAAAGCCTCAATGTCATGTATCCTAACGAAGGGAATGG
* * * *
52465 GTTTTTGGTACCCAATCTTGAAAATAATGGAGACTATTACAAGAATCAATGCTTGCCTTATTTAA
66 ATTTTTGGTACCCAATATTGAAAAGAATGGAGACTATTACAAGAATCAATGCTTACCTTATTTAA
52530 GGGATGAACTTTATTTTAAGGAAAATAGGGCAATAGAAACATTTCCATGCAAAAGAAAATCATCA
131 GGGATGAACTTTATTTTAAGGAAAATAGGGCAATAGAAACATTTCCATGCAAAAGAAAATCATCA
* * *
52595 ATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGTTAAA
196 ATATCATTTACCCAAATGAGAAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGATAAA
**
52660 TACTAGAATCCATGATTGTGTCATTTGAGGCACGAACTTAGTCTTTATAAAAATTGGTGGGAAGA
261 TACTAGAATCCATGATTGTGTCATTTGAGGCACGAACTTACACTTTATAAAAATTGGTGGGAAGA
** * * *
52725 AAGCCTTTCTTGCGACCCAAAGCATCAATATCATTTATCCTTCTAAGAAGACTATGTTTATGTTA
326 AAGCCTTTCTTGCGAAACAAAGCATCAATATCATGTATCCTTATAAGAAGACTATGTTTATGGTA
* * * *
52790 CCTAATCCTGAAAGGAATGGGGATTAATTTGAGTATTCATGTTTGTGTTATTTAAGAGACAAACT
391 CCTAATCCTGAAAGGAATGAGGATTAATATGACTATTCATGTTTGTCTTATTTAAGAGACAAACT
* * * ** * **
52855 TTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGT
456 CTGATTCTAACAAAAACGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAACATCAACATCATGT
* *
52920 ATTCTAATGAGGGGAATGTGTTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTACGAGAAT
521 ATTCTAATGAAGGGAATGTATTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTACGAGAAT
*
52985 CAATGTTTACCTTATTTAGAGGATGAACTTTGATTTTAAATAGGGCAAAGGAAACAATTCCATGC
586 CAATGTTTA-C-TATTTAGAGGATGAACTTTGATTTTAAATAGGGCAAAGAAAACAATTCCATGC
* * * *
53050 AAAATAAAATCATCAGTATTATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAAAAA
649 AAAAAAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAAAAA
* * *
53115 TTGAATGAAGATCATTACCAAAATCCATGATTGTCTCATTTGAGGCACGAACTTAGACTTTATAA
714 TTAAATGAAGATCATTACCAAAATCCATGATTGTCTCATTTGAGGCACGAACTTACACTTTACAA
53180 AAATTG
779 AAATTG
*
53186 GTGGGAA-AAATG-CTGTTCTTGCGA
1 GTTGGAAGAAA-GCCT-TTCTTGCGA
53210 ATCGAAAACA
Statistics
Matches: 709, Mismatches: 85, Indels: 38
0.85 0.10 0.05
Matches are distributed among these distances:
784 11 0.02
785 128 0.18
786 25 0.04
788 3 0.00
790 36 0.05
791 322 0.45
792 172 0.24
793 12 0.02
ACGTcount: A:0.35, C:0.14, G:0.19, T:0.32
Consensus pattern (784 bp):
GTTGGAAGAAAGCCTTTCTTGCGACACCAAAGCCTCAATGTCATGTATCCTAACGAAGGGAATGG
ATTTTTGGTACCCAATATTGAAAAGAATGGAGACTATTACAAGAATCAATGCTTACCTTATTTAA
GGGATGAACTTTATTTTAAGGAAAATAGGGCAATAGAAACATTTCCATGCAAAAGAAAATCATCA
ATATCATTTACCCAAATGAGAAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGATAAA
TACTAGAATCCATGATTGTGTCATTTGAGGCACGAACTTACACTTTATAAAAATTGGTGGGAAGA
AAGCCTTTCTTGCGAAACAAAGCATCAATATCATGTATCCTTATAAGAAGACTATGTTTATGGTA
CCTAATCCTGAAAGGAATGAGGATTAATATGACTATTCATGTTTGTCTTATTTAAGAGACAAACT
CTGATTCTAACAAAAACGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAACATCAACATCATGT
ATTCTAATGAAGGGAATGTATTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTACGAGAAT
CAATGTTTACTATTTAGAGGATGAACTTTGATTTTAAATAGGGCAAAGAAAACAATTCCATGCAA
AAAAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAAAAATT
AAATGAAGATCATTACCAAAATCCATGATTGTCTCATTTGAGGCACGAACTTACACTTTACAAAA
ATTG
Found at i:52845 original size:315 final size:316
Alignment explanation
Indices: 50822--52763 Score: 979
Period size: 315 Copynumber: 6.1 Consensus size: 316
50812 GGTTGAAAGA
* * ** * * *
50822 AAAGCTTTTCTTGCGACCCCAAAGCATCAATGCCAAGTATCCGAATGAAGGGA-ATGTGTTTTTG
1 AAAGCCTTTCTTGCGACACCAAAGCATCAATATCATGTAT-CTAATGAA-GGACATG-GTTTATG
* * * * * * * * * * * * *
50886 GTTCCCAATCTTGAAAAGAATAGAGTCTGTGTTACGAGAATCGAGGCTTGTCATACTTAAGTGAA
63 GTACCCAATCCTGAAAAGAATGGAGAC--TATTACAAGAATCAATGCTTGCCTTATTTAAGGGAT
* * * * * *
50951 GAATTTTGATTTTAACGAAAATAGGGCAAAGTAAACTTTTCCATG-TAAAATAAAATCATCAATA
126 GAACTTTGATTTTAACCAAAATAGGGCAAAGAAAACATTTCCATGCAAAAAAAAAATCATCAATA
* * * * * * * * *
51015 TCATTTATCCTAATGAGGAGAATTTGTTTATTGTGCCTAATCACAGAATGAATGA-AGATCATTC
191 TCATTTACCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACAAAAT-AAAGAGAGATAAATA
* * *
51079 CTAGAATCCATGATTGTC-TCATTTGAGGCACAAACTTAGACTTTATAAAAATTGGTGGGAAG
255 CTAGAATCCATGATTGTCGTC-TTTGAGGCACGAACTTACACTTTACAAAAATTGGTGGGAAG
* * *
51141 AAAGCCTTTCTTGTGACACCAAAGCATCAATGTCATGTATCTAATGAAGGGA-ATGGGTTTTTGG
1 AAAGCCTTTCTTGCGACACCAAAGCATCAATATCATGTATCTAATGAA-GGACAT-GGTTTATGG
* * ** *
51205 TACCCAATCTTGAAAATAATGGAGACTATTATGAGAATCAATGTTTGCCTTATTTAAGGGATGAA
64 TACCCAATCCTGAAAAGAATGGAGACTATTACAAGAATCAATGCTTGCCTTATTTAAGGGATGAA
** * * *
51270 CTTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCTATGC-AAAATAAAATCATCAATATCA
129 CTTTGATTTTAACCAAAATAGGGCAAAGAAAACATTTCCATGCAAAAAAAAAATCATCAATATCA
* * * * * * *
51334 TTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATTAAAGA-AGTTCATTTCTG
194 TTTACCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACAAAA-TAAAGAGAGATAAATACTA
* * * *
51398 GAATCCATGTTTGTC-TCCTTTGAAGTATGAACTTACA-TCTTAC-AAAATTGGTGGGAAG
258 GAATCCATGATTGTCGT-CTTTGAGGCACGAACTTACACT-TTACAAAAATTGGTGGGAAG
* * * *
51456 CAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGG-CTAT-GTTTAT
1 AAAGCCTTTCTTGCGACACCAAAGCATCAATATCATGTAT-CTAAT--GAAGGAC-ATGGTTTAT
* * * * * * * *
51519 GGTGCCTAATCCTGAAAAAGAATTGG-GATTAGTGTGAC--TATTC-TTGTTTGTCTTATTTAAG
62 GGTACCCAATCCTG-AAAAGAA-TGGAGACTA-T-T-ACAAGAATCAATGCTTGCCTTATTTAAG
* * * * * * * * * **
51580 AGA-GCAAACTTTGATTCTAACAAAAACAGTTG-AAAGAAAAGC-TTTTCTTGC--GACACCAAT
122 GGATG--AACTTTGATTTTAACCAAAATAG-GGCAAAGAAAA-CATTTCCATGCAAAAAAAAAAT
* * * * * * * * * * * *
51640 GCCTCAATGTC-TTGTATCCTAACGAAGG-GAATGTATTTTTGGTTCCCAAT-ATTGAAAAGAAT
183 -CATCAATATCATT-TACCCTAATG-AGGAGAATGTGTTTATAGTACCTAATCA--CAAAATAAA
** * * * ** * * * *** ** *
51702 G-GAGACT-GTTACGAGAATCAATGCTTACCTTATTTAAGGGTTGAACTTTGATTTTA-ATGAAA
243 GAGAGA-TAAATACTAGAATCCATGATTGTCGTCTTTGAGGCACGAACTTACACTTTACA--AAA
* **
51764 ATAGG-GCAAAGG
305 ATTGGTGGGAA-G
* * * ** * * * * * *
51776 AAA-CATTTCCAT--GAAAATAAATCGTCAATATCGTTTATCCAAATGAGAAGA-ATGTGTTTAT
1 AAAGCCTTT-CTTGCGACACCAAAGCATCAATATCATGTAT-CTAATGA-AGGACATG-GTTTAT
* * * * * * * * * * * *
51837 TGTGCCTAATCAT-AAAATGAATGAAGA-TCATTACTAGAATCCATGTTTGGCTCATTTGAGGCA
62 GGTACCCAATCCTGAAAA-GAATGGAGACT-ATTACAAGAATCAATGCTTGCCTTATTTAAGGGA
** * * * * * * * * * * *
51900 TGAACTTACACTTTATA--AAAATTGGTTG-GAAGAAAGC-TTTGCTTGCGAAACAGAAGT-GTC
125 TGAACTTTGATTTTA-ACCAAAATAGG--GCAAAGAAAACATTTCCATGCAAAAAAAAAATCATC
* * * * * * * * * * * *
51960 AATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CTGAAGAGAATGAG-GAT
187 AATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTACCTAATCAC--AAAATAAAGAGAGAT
* * * * * * * * * *
52023 TAGTA-T-GACTATTCATGTTTGTCTTATTTTAGAG-ACAAACTCT-GA-TTCTATCAAAAA-CG
250 AAATACTAGA--ATCCATGATTGTCGTCTTTGAG-GCACGAACT-TACACTT-TA-CAAAAATTG
*
52082 GTGGAAAG
309 GTGGGAAG
* * * * * * *
52090 AAAAGCTTTTCTTGCAACACCAAAACCTCAACATCATGTATTCTAATGAAGGTA-ATGTATTTTT
1 -AAAGCCTTTCTTGCGACACCAAAGCATCAATATCATGTA-TCTAATGAAGG-ACATG-GTTTAT
* * * * * * ** *
52154 GGTACCCAATCTTGAAATGAATGGAGATTGTTACGAGAATCGATGC-TGGTTATATTTATGGGAT
62 GGTACCCAATCCTGAAAAGAATGGAGACTATTACAAGAATCAATGCTTGCCT-TATTTAAGGGAT
* * *
52218 GAATTTTGATTTTAACCAAAATAGGGCAAAGAAAATATTTTCATGCAAAAAAAAAATCATCAATA
126 GAACTTTGATTTTAACCAAAATAGGGCAAAGAAAACATTTCCATGCAAAAAAAAAATCATCAATA
* * * * *
52283 TCGTTTATCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACAAAATAAATAGAGATCATTAC
191 TCATTTACCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACAAAATAAAGAGAGATAAATAC
* * * * * *
52348 TAGAATCTATGTTTTTCTTCTTTGAGGGACGAACTTACACTTTACAAAAATTGGTTGGAAG
256 TAGAATCCATGATTGTCGTCTTTGAGGCACGAACTTACACTTTACAAAAATTGGTGGGAAG
* * * *
52409 AAAGCCTTTCTTGCGACACCAAAGCTTCAATGTCATGTATCTAATGAAGGGCATGGGTTTTTGGT
1 AAAGCCTTTCTTGCGACACCAAAGCATCAATATCATGTATCTAATGAAGGACAT-GGTTTATGGT
* *
52474 ACCCAATCTTGAAAATAATGGAGACTATTACAAGAATCAATGCTTGCCTTATTTAAGGGATGAAC
65 ACCCAATCCTGAAAAGAATGGAGACTATTACAAGAATCAATGCTTGCCTTATTTAAGGGATGAAC
** *
52539 TTT-ATTTTAAGGAAAATAGGGCAATAG-AAACATTTCCATGC-AAAAGAAAATCATCAATATCA
130 TTTGATTTTAACCAAAATAGGGCAA-AGAAAACATTTCCATGCAAAAAAAAAATCATCAATATCA
* *
52601 TTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGA-AGTTAAATACTA
194 TTTACCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACAAAAT-AAAGAGAGATAAATACTA
** *
52665 GAATCCATGATTGT-GTCATTTGAGGCACGAACTTAGTCTTTATAAAAATTGGTGGGAAG
258 GAATCCATGATTGTCGTC-TTTGAGGCACGAACTTACACTTTACAAAAATTGGTGGGAAG
*
52724 AAAGCCTTTCTTGCGAC-CCAAAGCATCAATATCATTTATC
1 AAAGCCTTTCTTGCGACACCAAAGCATCAATATCATGTATC
52764 CTTCTAAGAA
Statistics
Matches: 1257, Mismatches: 274, Indels: 189
0.73 0.16 0.11
Matches are distributed among these distances:
313 2 0.00
314 32 0.03
315 281 0.22
316 278 0.22
317 231 0.18
318 278 0.22
319 136 0.11
320 17 0.01
321 2 0.00
ACGTcount: A:0.35, C:0.15, G:0.18, T:0.32
Consensus pattern (316 bp):
AAAGCCTTTCTTGCGACACCAAAGCATCAATATCATGTATCTAATGAAGGACATGGTTTATGGTA
CCCAATCCTGAAAAGAATGGAGACTATTACAAGAATCAATGCTTGCCTTATTTAAGGGATGAACT
TTGATTTTAACCAAAATAGGGCAAAGAAAACATTTCCATGCAAAAAAAAAATCATCAATATCATT
TACCCTAATGAGGAGAATGTGTTTATAGTACCTAATCACAAAATAAAGAGAGATAAATACTAGAA
TCCATGATTGTCGTCTTTGAGGCACGAACTTACACTTTACAAAAATTGGTGGGAAG
Found at i:54457 original size:477 final size:476
Alignment explanation
Indices: 52401--55452 Score: 3663
Period size: 477 Copynumber: 6.4 Consensus size: 476
52391 ACAAAAATTG
* * * * *
52401 GTTGGAAG-AAAGCCTTTCTTGCGACACCAAAGCTTCAATGTCATGTAT-CTAATGAAGGGCATG
1 GTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
** * *
52464 GGTTTTTGGTACCCAATCTTGAAAAT-AATGGAGACTATTACAAGAATCAATGCTTGCCTTATTT
66 TATTTTTGGTACCCAATCTTG-AAATGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTT
* *
52528 AAGGGATGAACTTT-ATTTTAAGGAAAATAGGGCAATA-GAAACATTTCCATGCAAAAGAAAATC
130 AAGGGATGAACTTTGATTTTAATGAAAATAGGGCAA-AGGAAACATTTCCATGCAAAATAAAATC
* * *
52591 ATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGT
194 ATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
* * * * ** ** *
52656 TAAATACTAGAATCCATGATTGTGTCATTTGAGGCACGAACTTAGTCTTTATAAAAATTGGTGGG
259 TCATTACTAAAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTTACAAAAATTGGTGGG
* * ** * *
52721 AAGAAAGCCTTTCTTGCG-ACCCAAAGCATCAATATCATTTATCCTTCTAAGAAGACTATGTTTA
324 AAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCCTAATGAGAAGACTACGTTTA
* * * * * * * *
52785 TGTTACCTAATCCTGAAAGGAATGGGGATTAATTTGAGTATTCATGTTTGTGTTATTTA-AGAGA
389 TGGTGCCTAATCCTGAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTTAGAGAG-
**
52849 CAAACTTTGATTCTAACAAAAATG
453 CAAACTTTGATTCTAACAAAAACA
* *
52873 GTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATTCTAATGAGGGGAATG
1 GTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* * *
52938 TGTTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTACGAGAATCAATGTTTACCTTATTT-
66 TATTTTTGGTACCCAATCTTGAAATGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTTA
*
53002 AGAGGATGAACTTTGA-TTT--T--AAATAGGGCAAAGGAAACAATTCCATGCAAAATAAAATCA
131 AG-GGATGAACTTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATAAAATCA
* *
53062 TCAGTATTATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCA-AAAATTGAATGAAGA
195 TCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA-TGAATGAAGA
* * * * *
53126 TCATTACCAAAATCCATGATTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGGG
259 TCATTACTAAAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTTACAAAAATTGGTGGG
* * * * * *
53191 AA-AAATG-CTGTTCTTGCGAATCGAAAACATCAATAT-AGTATATCCTTATGAGAAGACTATG-
324 AAGAAA-GCCT-TTCTTGCGAAACCAAAGCATCAATATCA-TCTATCCTAATGAGAAGACTACGT
* * * * * *
53252 TTATGGTGCCTAATCCTGAAAAGAAT-GCAGAATAATTTGAGTATTCATGTTTGTCTTTTTTAAG
386 TTATGGTGCCTAATCCTGAAAAGAATAG-GGATTAGTATGACTATTCATGTTTGTCTTATTT-AG
53316 AGAG-AAACTTTGATTCTAACAAAAACA
449 AGAGCAAACTTTGATTCTAACAAAAACA
* * ** *
53343 GTTGAAAGAAAAGCTTTTCTTGTGACATCAAAGAATCAACATCATGTATCCTAATGAAGGGAACG
1 GTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* * * *
53408 TGTTTTGGGTACCCAATCTTGAATTGAATGGAGACTATTACGAGAATCAATGCTTACGTTATTTA
66 TATTTTTGGTACCCAATCTTGAAATGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTTA
*
53473 CA-GGATGAACTTTGATTTTAATGAAAATAGGGCGAAGGAAACATTTCCATGCAAAATAAAATCA
131 -AGGGATGAACTTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATAAAATCA
** * * *
53537 TTTATAACATTTATCCTAATGAGGACAATGTGTTTATTA-TGCCTAATCACAAACTGAATGAAGA
195 TCAATATCATTTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAATGAATGAAGA
* * * * * *
53601 TCATTATTAGAATCCATGTTTAACTCATTTTTTAGGCACGAACATACATTTTACAAAAATTGGTG
259 TCATTACTAAAATCCATGTTTGACTCA--TTTGAGGCACGAACTTACACTTTACAAAAATTGGTG
* ** * * * *
53666 GGAAGAAAGCCTTTCTAGCGAAACCAAAGTGTCAAAATCATGTATCCTTATGAGAAGACTATGTT
322 GGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCCTAATGAGAAGACTACGTT
* * *
53731 TACGGTGCCTAATCCTAAAAAGAAT-GAGGATTAGTATGACTATTCACGTTTGTCTTATTTTAGA
387 TATGGTGCCTAATCCTGAAAAGAATAG-GGATTAGTATGACTATTCATGTTTGTCTTA-TTTAGA
* * *
53795 GA-CAAACTCTGATTCTATCAAAAACG
450 GAGCAAACTTTGATTCTAACAAAAACA
** *
53821 GAGGAAAGAAAAGCTTTTCTTAG-GACACCAAAACATCAATGTCATGTATCCTAATGAAGGGAAT
1 GTTGAAAGAAAAGCTTTTCTT-GTGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* * * * ** *
53885 GTGTTTTTGGTATCCAATCTTGAAATGAATGGAGACTGTTACGAGAATCGATG-TTGGTCATATT
65 GTATTTTTGGTACCCAATCTTGAAATGAATGGAGACTATTACGAGAATCAATGCTT-ACCTTATT
* * * * * *
53949 TATGGGATGAATTTTGATTTTAACT-AAAATAGGGCAAAGAAAAGATTTTCATGCAAAAAAAAAT
129 TAAGGGATGAACTTTGATTTTAA-TGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATAAAAT
*
54013 CATCAATATCATTTATCCTAATGACGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
193 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
* * * *
54078 ATTATTACTAAAATCCTTGTTTGACTTATTTGAGGCATGAACTTACACTTTACAAAAATTGGTGG
258 ATCATTACTAAAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTTACAAAAATTGGTGG
* * *
54143 GAAGAAAGCCTTTCTTGCAAAACCAAAGCCTCAATATCGTCTATCCTAACT-AGAAGACTACGTT
323 GAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCCTAA-TGAGAAGACTACGTT
** * * * *
54207 TATGGTGAATAATCTTGAAAAGAATAGGGATTAGTATGAATATTCAAGTTTGACTTATTTACGAG
387 TATGGTGCCTAATCCTGAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTTA-GAG
* *
54272 AGAAAACTTTGATTCTAACAAAGACA
451 AGCAAACTTTGATTCTAACAAAAACA
* * * * * * * * **
54298 GTTAAAAGAAAAGTTTTTCTTATGACACTAATGCATCAATGTCTTGTATCATAAAGAACAGAATG
1 GTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* *
54363 TATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTTA
66 TATTTTTGGTACCCAATCTTGAAATGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTTA
* * * *
54428 AGGGTTGAACTTTGATTTTAATGAAAATAGGGCAGAGGAAACATTTCCACGCAAAATAAAATCGT
131 AGGGATGAACTTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATAAAATCAT
* * * * *
54493 CAATATCGTTTATCCTAATAAGGAGAATATGTTTATTGTGCCTAATCACAAAATGAATGAATATC
196 CAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
* * * * *
54558 ATTAATAGAATCCATGTTCGACTCATTTGAGGCACGAACTTAAACTTTATAAAAATTGGTGGGAA
261 ATTACTAAAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTTACAAAAATTGGTGGGAA
** * * * *
54623 GAAAGCCTTTCTTGCGAAACCAAAGTGTCAATATCGTGTCTCCTTAA-GAGAAGACTACGTTTGT
326 GAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCC-TAATGAGAAGACTACGTTTAT
*
54687 GGTGCCTAATCCTGAAAAGAATAAGGATTAGTATGACTATTCATGTTTGTCTTATTTTAGAGA-C
390 GGTGCCTAATCCTGAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTA-TTTAGAGAGC
* *
54751 AAACTCTGATTCTATA-AGAAACA
454 AAACTTTGATTCTA-ACAAAAACA
* * * * ** * *
54774 GTGGAAAGAAAAGCTTTACTTGCGACACCAAAACATTTACGTCATGTATCCTAATGAAAGGAATG
1 GTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* * * *** *
54839 -AGTTTTTGGTACCCAATCTTGAAATTAATGGAGATTGTTACGAGAATCAATGCTGGTCATATTT
66 TA-TTTTTGGTACCCAATCTTGAAATGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTT
** * * * * *
54903 GTGGGATGAATTTTGATTTTAACT-AAAATAAGGCAAAGAAAAGATTTCCATGCAAAAAAAAAAT
130 AAGGGATGAACTTTGATTTTAA-TGAAAATAGGGCAAAGGAAACATTTCCATGC-AAAATAAAAT
* * *
54967 CATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCAAAAAATGAATAAAG
193 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
* * *
55032 ATCGTTACTAAAATCCTTGTTTGACTCATTTGAGGCATGAACTTACACTTTACAAAAATTGGTGG
258 ATCATTACTAAAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTTACAAAAATTGGTGG
*
55097 CAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCCTAACT-AGAAGACTACGTT
323 GAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCCTAA-TGAGAAGACTACGTT
* * * *
55161 TATGGTGCCTAATCTTGTAAAGAATAGGGATTAGTATGACTATTCAAGTTTGACTTATTTAGGAG
387 TATGGTGCCTAATCCTGAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTTA-GAG
*
55226 AGCAAACTTTGATTCTAACAAAAATA
451 AGCAAACTTTGATTCTAACAAAAACA
* * * * * * *
55252 GTTGAAAAAAAAGCTTTTCTTGCGACACCAATGCATCAATATCTTGTATCCTAGA-GAAGGAAAA
1 GTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTA-ATGAAGGGAAT
* * * *
55316 GTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAACGCTTATCTTATTT
65 GTATTTTTGGTACCCAATCTTGAAATGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTT
* ** *
55381 AAGGGTTGAACTTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCATGCAAAACCAAAGCA
130 AAGGGATGAACTTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATAAAATCA
55446 TCAATAT
195 TCAATAT
55453 TGTGTATCCT
Statistics
Matches: 2205, Mismatches: 317, Indels: 111
0.84 0.12 0.04
Matches are distributed among these distances:
469 11 0.00
470 364 0.17
471 38 0.02
472 12 0.01
473 44 0.02
474 81 0.04
475 115 0.05
476 311 0.14
477 730 0.33
478 492 0.22
479 7 0.00
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.31
Consensus pattern (476 bp):
GTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
TATTTTTGGTACCCAATCTTGAAATGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTTA
AGGGATGAACTTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATAAAATCAT
CAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
ATTACTAAAATCCATGTTTGACTCATTTGAGGCACGAACTTACACTTTACAAAAATTGGTGGGAA
GAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCCTAATGAGAAGACTACGTTTATG
GTGCCTAATCCTGAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTTAGAGAGCAA
ACTTTGATTCTAACAAAAACA
Found at i:55326 original size:954 final size:949
Alignment explanation
Indices: 52409--55507 Score: 4050
Period size: 953 Copynumber: 3.3 Consensus size: 949
52399 TGGTTGGAAG
* * * ** **
52409 AAAGCCTTTCTTGCGACACCAAAGCTTCAATGTCATGTAT-CTAATGAAGGGCATGGGTTTTTGG
1 AAAGCTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATGAAGGAAATGTATTTTTGG
* * *
52473 TACCCAATCTTGAAAATAATGGAGACTATTACAAGAATCAATGCTTGCCTTATTTAAGGGATGAA
66 TACCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTTAAGGGATGAA
* * *
52538 CTTT-ATTTTAAGGAAAATAGGGCA-ATAGAAACATTTCCATGCAAAAGAAAATCATCAATATCA
131 CTTTGATTTTAATGAAAATAGGGCAGA-GGAAACATTTCCATGCAAAATAAAATCATCAATATCA
* * * * * * * *
52601 TTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGT-TAAATACTA
195 TTTATCCTAATAAGGAGAATATGTTTATTGTGCCTAATCACAAAATGAATGAA-TATCATTAATA
** **
52665 GAATCCATGATTGTGTCATTTGAGGCACGAACTTAGTCTTTATAAAAATTGGTGGGAAGAAAGCC
259 GAATCCATG-TTGACTCATTTGAGGCACGAACTTAAACTTTATAAAAATTGGTGGGAAGAAAGCC
* ** * * * *
52730 TTTCTTGCG-ACCCAAAGCATCAATATCATTTATCCTTCTA-AGAAGACTATGTTTATGTTACCT
323 TTTCTTGCGAAACCAAAGTGTCAATATCATGTATCCTT-AAGAGAAGACTATGTTTATGGTGCCT
* * * * * * * *
52793 AATCCTGAAAGGAATGGGGATTAATTTGAGTATTCATGTTTGTGTTATTTAAGAGACAAACTTTG
387 AATCCTGAAAAGAATGAGGATTAGTATGACTATTCATGTTTGTCTTATTTTAGAGACAAACTCTG
* * * * *
52858 ATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATT
452 ATTCT-ATAAAAACGGTGGAAAGAAAAGCTTTTCTTG-GACACCAAAACATCAATGTCATGTATC
*
52923 CTAATGAGGGGAATGTGTTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTACGAGAATCAA
515 CTAATGAAGGGAATGTGTTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTACGAGAATCAA
*** * * * * * *
52988 TGTTTACCTTATTTAG-AGGATGAACTTTGA-TTT---T-AAATAGGGCAAAGGAAACAATTCCA
580 TGTTGGTCATATTT-GTGGGATGAATTTTGATTTTAACTAAAATAGGGCAAAGAAAAGATTTCCA
* * *
53047 TGCAAAATAAAATCATCAGTATTATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAA
644 TGCAAAAAAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAA
* * * * * * *
53112 AAATTGAATGAAGATCATTACCAAAATCCATGATTGTCTCATTTGAGGCACGAACTTAGACTTTA
709 AAAATGAATGAAGATCATTACTAAAATCCTTGTTTGACTCATTTGAGGCATGAACTTACACTTTA
* * * * * *
53177 TAAAAATTGGTGGGAA-AAATG-CTGTTCTTGCGAATCGAAAACATCAATAT-AGTATATCCTTA
774 CAAAAATTGGTGGGAAGAAA-GCCT-TTCTTGCGAAACCAAAGCATCAATATCA-TCTATCCTAA
* * * * * * * *
53239 -TGAGAAGACTATG-TTATGGTGCCTAATCCTGAAAAGAAT-GCAGAATAATTTGAGTATTCATG
836 CT-AGAAGACTACGTTTATGGTGCCTAATCTTGAAAAGAATAG-GGATTAGTATGAATATTCAAG
* * *
53301 TTTGTCTTTTTTAAGAGAGAAACTTTGATTCTAACAAAAACAGTTGAAAGA
899 TTTGACTTATTTAAGAGAGAAACTTTGATTCTAACAAAAACAGTTGAAAAA
* * * * * * * *
53352 AAAGCTTTTCTTGTGACATCAAAGAATCAACATCATGTATCCTAATGAAGGGAACGTGTTTTGGG
1 AAAGCTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATGAAGGAAATGTATTTTTGG
** *
53417 TACCCAATCTTGAATTGAATGGAGACTATTACGAGAATCAATGCTTACGTTATTTACA-GGATGA
66 TACCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTTA-AGGGATGA
** *
53481 ACTTTGATTTTAATGAAAATAGGGC-GAAGGAAACATTTCCATGCAAAATAAAATCATTTATAAC
130 ACTTTGATTTTAATGAAAATAGGGCAG-AGGAAACATTTCCATGCAAAATAAAATCATCAATATC
* * * * * * *
53545 ATTTATCCTAATGAGGACAATGTGTTTATTATGCCTAATCACAAACTGAATGAAGATCATTATTA
194 ATTTATCCTAATAAGGAGAATATGTTTATTGTGCCTAATCACAAAATGAATGAATATCATTAATA
* * * * * *
53610 GAATCCATGTTTAACTCATTTTTTAGGCACGAACATACATTTTACAAAAATTGGTGGGAAGAAAG
259 GAATCCATG-TTGACTCA--TTTGAGGCACGAACTTAAACTTTATAAAAATTGGTGGGAAGAAAG
* * * *
53675 CCTTTCTAGCGAAACCAAAGTGTCAAAATCATGTATCCTTATGAGAAGACTATGTTTACGGTGCC
321 CCTTTCTTGCGAAACCAAAGTGTCAATATCATGTATCCTTAAGAGAAGACTATGTTTATGGTGCC
* *
53740 TAATCCTAAAAAGAATGAGGATTAGTATGACTATTCACGTTTGTCTTATTTTAGAGACAAACTCT
386 TAATCCTGAAAAGAATGAGGATTAGTATGACTATTCATGTTTGTCTTATTTTAGAGACAAACTCT
*
53805 GATTCTATCAAAAACGGAGGAAAGAAAAGCTTTTCTTAGGACACCAAAACATCAATGTCATGTAT
451 GATTCTAT-AAAAACGGTGGAAAGAAAAGCTTTTCTT-GGACACCAAAACATCAATGTCATGTAT
* *
53870 CCTAATGAAGGGAATGTGTTTTTGGTATCCAATCTTGAAATGAATGGAGACTGTTACGAGAATCG
514 CCTAATGAAGGGAATGTGTTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTACGAGAATCA
* *
53935 ATGTTGGTCATATTTATGGGATGAATTTTGATTTTAACTAAAATAGGGCAAAGAAAAGATTTTCA
579 ATGTTGGTCATATTTGTGGGATGAATTTTGATTTTAACTAAAATAGGGCAAAGAAAAGATTTCCA
* *
54000 TGCAAAAAAAAATCATCAATATCATTTATCCTAATGACGAGAATGTGTTTATAGTGCCTAATCAC
644 TGCAAAAAAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAA
* *
54065 AAAATGAATGAAGATTATTACTAAAATCCTTGTTTGACTTATTTGAGGCATGAACTTACACTTTA
709 AAAATGAATGAAGATCATTACTAAAATCCTTGTTTGACTCATTTGAGGCATGAACTTACACTTTA
* * *
54130 CAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCCTCAATATCGTCTATCCTAACTA
774 CAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCCTAACTA
**
54195 GAAGACTACGTTTATGGTGAATAATCTTGAAAAGAATAGGGATTAGTATGAATATTCAAGTTTGA
839 GAAGACTACGTTTATGGTGCCTAATCTTGAAAAGAATAGGGATTAGTATGAATATTCAAGTTTGA
* *
54260 CTTATTTACGAGAGAAAACTTTGATTCTAACAAAGACAGTT-AAAAGA
904 CTTATTTAAGAGAG-AAACTTTGATTCTAACAAAAACAGTTGAAAA-A
* ** * * * * * * *
54307 AAAGTTTTTCTTATGACACTAATGCATCAATGTCTTGTATCATAAAGAA-CAGAATGTATTTTTG
1 AAAGCTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATGAAGGA-AATGTATTTTTG
* *
54371 GTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTTAAGGGTTGA
65 GTACCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTTAAGGGATGA
* * *
54436 ACTTTGATTTTAATGAAAATAGGGCAGAGGAAACATTTCCACGCAAAATAAAATCGTCAATATCG
130 ACTTTGATTTTAATGAAAATAGGGCAGAGGAAACATTTCCATGCAAAATAAAATCATCAATATCA
54501 TTTATCCTAATAAGGAGAATATGTTTATTGTGCCTAATCACAAAATGAATGAATATCATTAATAG
195 TTTATCCTAATAAGGAGAATATGTTTATTGTGCCTAATCACAAAATGAATGAATATCATTAATAG
54566 AATCCATGTTCGACTCATTTGAGGCACGAACTTAAACTTTATAAAAATTGGTGGGAAGAAAGCCT
260 AATCCATGTT-GACTCATTTGAGGCACGAACTTAAACTTTATAAAAATTGGTGGGAAGAAAGCCT
* * * *
54631 TTCTTGCGAAACCAAAGTGTCAATATCGTGTCTCCTTAAGAGAAGACTACGTTTGTGGTGCCTAA
324 TTCTTGCGAAACCAAAGTGTCAATATCATGTATCCTTAAGAGAAGACTATGTTTATGGTGCCTAA
*
54696 TCCTGAAAAGAATAAGGATTAGTATGACTATTCATGTTTGTCTTATTTTAGAGACAAACTCTGAT
389 TCCTGAAAAGAATGAGGATTAGTATGACTATTCATGTTTGTCTTATTTTAGAGACAAACTCTGAT
* * ** *
54761 TCTATAAGAAACAGTGGAAAGAAAAGCTTTACTTGCGACACCAAAACATTTACGTCATGTATCCT
454 TCTATAA-AAACGGTGGAAAGAAAAGCTTTTCTTG-GACACCAAAACATCAATGTCATGTATCCT
* * * *
54826 AATGAAAGGAATGAGTTTTTGGTACCCAATCTTGAAATTAATGGAGATTGTTACGAGAATCAATG
517 AATGAAGGGAATGTGTTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTACGAGAATCAATG
* *
54891 CTGGTCATATTTGTGGGATGAATTTTGATTTTAACTAAAATAAGGCAAAGAAAAGATTTCCATGC
582 TTGGTCATATTTGTGGGATGAATTTTGATTTTAACTAAAATAGGGCAAAGAAAAGATTTCCATGC
*
54956 AAAAAAAAAATCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCAAAA
647 -AAAAAAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAAAA
* *
55021 AATGAATAAAGATCGTTACTAAAATCCTTGTTTGACTCATTTGAGGCATGAACTTACACTTTACA
711 AATGAATGAAGATCATTACTAAAATCCTTGTTTGACTCATTTGAGGCATGAACTTACACTTTACA
*
55086 AAAATTGGTGGCAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCCTAACTAGA
776 AAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCCTAACTAGA
* *
55151 AGACTACGTTTATGGTGCCTAATCTTGTAAAGAATAGGGATTAGTATGACTATTCAAGTTTGACT
841 AGACTACGTTTATGGTGCCTAATCTTGAAAAGAATAGGGATTAGTATGAATATTCAAGTTTGACT
* *
55216 TATTTAGGAGAGCAAACTTTGATTCTAACAAAAATAGTTGAAAAA
906 TATTTAAGAGAG-AAACTTTGATTCTAACAAAAACAGTTGAAAAA
* * *
55261 AAAGCTTTTCTTGCGACACCAATGCATCAATATCTTGTATCCTAGA-GAAGGAAAAGTATTTTTG
1 AAAGCTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTA-ATGAAGGAAATGTATTTTTG
* * * *
55325 GTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAACGCTTATCTTATTTAAGGGTTGA
65 GTACCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTTAAGGGATGA
* ** * **
55390 ACTTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCATGCAAAACCAAAGCATCAATATTG
130 ACTTTGATTTTAATGAAAATAGGGCAGAGGAAACATTTCCATGCAAAATAAAATCATCAATATCA
* * * * * * *
55455 TGTATCCTTTATAAGAAGACTACGTTTATGGTGCCTAATC-CTAAAAAGAATGA
195 TTTATCC-TAATAAGGAGAATATGTTTATTGTGCCTAATCAC-AAAATGAATGA
55508 CGATTAGTAT
Statistics
Matches: 1886, Mismatches: 232, Indels: 64
0.86 0.11 0.03
Matches are distributed among these distances:
943 33 0.02
944 81 0.04
945 118 0.06
946 1 0.00
947 50 0.03
948 237 0.13
949 4 0.00
952 4 0.00
953 528 0.28
954 526 0.28
955 303 0.16
956 1 0.00
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.31
Consensus pattern (949 bp):
AAAGCTTTTCTTGCGACACCAAAGCATCAATATCATGTATCCTAATGAAGGAAATGTATTTTTGG
TACCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTACCTTATTTAAGGGATGAA
CTTTGATTTTAATGAAAATAGGGCAGAGGAAACATTTCCATGCAAAATAAAATCATCAATATCAT
TTATCCTAATAAGGAGAATATGTTTATTGTGCCTAATCACAAAATGAATGAATATCATTAATAGA
ATCCATGTTGACTCATTTGAGGCACGAACTTAAACTTTATAAAAATTGGTGGGAAGAAAGCCTTT
CTTGCGAAACCAAAGTGTCAATATCATGTATCCTTAAGAGAAGACTATGTTTATGGTGCCTAATC
CTGAAAAGAATGAGGATTAGTATGACTATTCATGTTTGTCTTATTTTAGAGACAAACTCTGATTC
TATAAAAACGGTGGAAAGAAAAGCTTTTCTTGGACACCAAAACATCAATGTCATGTATCCTAATG
AAGGGAATGTGTTTTTGGTACCCAATCTTGAAATGAATGGAGACTGTTACGAGAATCAATGTTGG
TCATATTTGTGGGATGAATTTTGATTTTAACTAAAATAGGGCAAAGAAAAGATTTCCATGCAAAA
AAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAAAAAATGA
ATGAAGATCATTACTAAAATCCTTGTTTGACTCATTTGAGGCATGAACTTACACTTTACAAAAAT
TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCCTAACTAGAAGACT
ACGTTTATGGTGCCTAATCTTGAAAAGAATAGGGATTAGTATGAATATTCAAGTTTGACTTATTT
AAGAGAGAAACTTTGATTCTAACAAAAACAGTTGAAAAA
Found at i:55609 original size:319 final size:310
Alignment explanation
Indices: 55116--55774 Score: 750
Period size: 310 Copynumber: 2.1 Consensus size: 310
55106 CTTTCTTGCG
* **
55116 AAACCAAAGCATCAATATCATCTATCCTAACTAGAAGACTACGTTTATGGTGCCTAATCTTGTAA
1 AAACCAAAGCATCAATATCATCTATCCTAACTAGAAGACTACGTTTATGGTGCCTAATCCTAAAA
* ** *
55181 AGAATAGGGATTAGTATGACTATTCAAGTTTGACTTATTTAGGAGAGCAAACTTTGATTCTAACA
66 AGAATAGCGATTAGTATGACTATTCAAGTTTGACTTATTTAAAAGAGCAAACTCTGATTCTAACA
* * * * * *
55246 AAAATAGTTGAAAAAAAAGCTTTTCTTGCGACACCAATGCATCAATATCTTGTATCCTAGAGAAG
131 AAAAGAGTGGAAAAAAAAGCTTTTCTTGCAACACCAAAGCATCAATATCATATATCCT-------
* * *
55311 GAAAAGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAACGCTTATCT
189 --AAAGTATCTTTAGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAACGCTTACCT
* * *
55376 TATTTAAGGGTTGAACTTTGATTTTAATGAAAATAGGGCAAAGGAAACATTTCCATGCA
252 TATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAACGAAACATTTCCATGCA
** * *
55435 AAACCAAAGCATCAATATTGTGTATCCTTTA-TAAGAAGACTACGTTTATGGTGCCTAATCCTAA
1 AAACCAAAGCATCAATATCATCTATCC-TAACT-AGAAGACTACGTTTATGGTGCCTAATCCTAA
* * * * *
55499 AAAGAAT-GACGATTAGTATGGCTGTTTATGTTTGTCTTATTTAAAAGA-CAAACTCTGATTCTA
64 AAAGAATAG-CGATTAGTATGACTATTCAAGTTTGACTTATTTAAAAGAGCAAACTCTGATTCTA
* * * * * *
55562 TCGAAAACGA-TGGAAAGAAAAGCTTTTCTTGTAACACCAAAGCATCAATGTCATATATCCTAAT
128 AC-AAAAAGAGTGGAAAAAAAAGCTTTTCTTGCAACACCAAAGCATCAATATCATATATCCTAAA
* * * * * * *
55626 GTGTCTTTAGTTCCCAATCTTGAAAATAATGGGGACTCTTACGAGAGTCAATGCTTGCCTTATTT
192 GTATCTTTAGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAACGCTTACCTTATTT
*
55691 AAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAACGAAACATTTCCATTCA
257 AAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAACGAAACATTTCCATGCA
** * * *
55745 AAAGAAAATCATCAATATCATTTACCCTAA
1 AAACCAAAGCATCAATATCATCTATCCTAA
55775 TGTGGAGAAT
Statistics
Matches: 286, Mismatches: 50, Indels: 18
0.81 0.14 0.05
Matches are distributed among these distances:
309 2 0.01
310 127 0.44
319 84 0.29
320 73 0.26
ACGTcount: A:0.37, C:0.16, G:0.17, T:0.31
Consensus pattern (310 bp):
AAACCAAAGCATCAATATCATCTATCCTAACTAGAAGACTACGTTTATGGTGCCTAATCCTAAAA
AGAATAGCGATTAGTATGACTATTCAAGTTTGACTTATTTAAAAGAGCAAACTCTGATTCTAACA
AAAAGAGTGGAAAAAAAAGCTTTTCTTGCAACACCAAAGCATCAATATCATATATCCTAAAGTAT
CTTTAGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAACGCTTACCTTATTTAAGG
GATGAACTTTGATTTTAAGGAAAATAGGGCAAACGAAACATTTCCATGCA
Found at i:57919 original size:477 final size:476
Alignment explanation
Indices: 55435--58456 Score: 3931
Period size: 476 Copynumber: 6.4 Consensus size: 476
55425 TTTCCATGCA
* * * * *
55435 AAACCAAAGCATCAATATTGTGTATCCTTTATAAGAAGACTACGTTTATGGTGCCTAATCCTAAA
1 AAACCAAAGCGTCAATATCGTGTATCC-TTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAA
** * * * * * *
55500 AAGAATGACGATTAGTATGGCTGTTTATGTTTGTCTTATTTAAAAGACAAACTCTGATTCTATCG
65 AAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCA
* ** *
55565 AAAAC-GATGGAAAGAAAAGCTTTTCTTGTAACACCAAAGCATCAATGTCATATATCC---T---
130 AAAACAG-TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * *
55623 ---AATGTGTCTTTAGTTCCCAATCTTGAAAATAATGGGGACTCTTACGAGAGTCAATGCTTGCC
194 GGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* *
55685 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAACGAAACATTTCCATTCAAAAGA
259 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGA
* * * *
55750 AAATCATCAATATCATTTACCCTAATGTGGAGAATGTGTTTATAGTG-TTAATCACGAACTGAAT
324 AAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
** * * * * * * * *
55814 GGGGATCATTATTGGAGTCCATGATTGTCTCTTTTAAGGCACGAACTTAGACTTTATAAAAATTA
389 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTG
* * *
55879 GAGAGAAGAAAGCCTTTCTTGTG
454 GTGGGAAGAAAGCCTTTCTTGCG
* * * ** *
55902 AAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTTTGTTTATGGTGAATAATCTTGAAA
1 AAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAA
* ** * * * * * *
55967 TGTTTGGGGATTCA-TTTGAGTATTCAGGTTTGTCCTATTTGAGAGACAAACTTTGATTCTAATA
66 AGAATGGGGATT-AGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCT-ATC
* * *
56031 AAAAACAGTTGAAAGAAAAGCATTTCTTGTGACATCAAAGCATCAATG-CATTGTATCCTAATGA
129 AAAAACAGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCA-TGTATCCTAATGA
* * *
56095 AGGGAATGTGTTTTTGGTT-CCAATCTTGAAATGAATAGAGACTGTTACGAGAATCAATGCTTAC
193 AGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * * * * *
56159 CTTCTTTAAGGGTTGAACTTTGATTCTAAAGAAAATAAGGCAGAGGAAACATTTCCATGCAAAAT
258 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAG
* * * ** * *
56224 AAAATCGTCAATATCATTCATCCTAGCGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATAAA
323 AAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * * * *
56289 TGATGATCATTAATAGAATCCATGTTTGACTCTTTTGAGGCACGAACATACAC-TTACAAAAATT
388 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATT
*
56353 GGTGGGAAGAAA-CGCTTTCTTGTG
453 GGTGGGAAGAAAGC-CTTTCTTGCG
* *
56377 AAACCAAAGCGTCAATATCGTGAATCCTTATGAGAAGACTATGTTTGTGGTGCCTAATCCTGAAA
1 AAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAA
* * * *
56442 AGAATGGGGATTAGTATGACGATCCATGTTTGTCTTATTTAAGAGACAAACTTGGATTCTAGCAA
66 AGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * *
56507 AAACAGTTAAAAGAAAAGCTTTTCTTGCGACCCCAGAGCATCAATGTCA-GCTATCCTAATGAAG
131 AAACAGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATG-TATCCTAATGAAG
* *
56571 GGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGAATGTTACGAGAATCAATGCTTCCCT
195 GGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCT
* *
56636 TATTTAAGGGATGAACTTTGATTTTAAGGAAAATATGGCAAAGGAAACATTTCCAAGCAAAA-AA
260 TATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAA
* *
56700 AATCACCAATATCATTTACCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
325 AATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* *
56765 AAGATCATTACTAGAATCCATGTTTGTCTCATCTGAGGCACGAACTTAGACATTATAAAAAATGG
390 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGG
* *
56830 TGGGAACAAATCCTTTCTTGCG
455 TGGGAAGAAAGCCTTTCTTGCG
* * * *
56852 AAACCAAAGTGAT-AATATCGTGTATCCTTATGAAAAGAC--TGTTTATGGCGCCTAATCCTAAA
1 AAACCAAAGCG-TCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAA
* *
56914 AAGAATGGGGATTACTATGACTATTCATGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCA
65 AAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCA
* * * * *
56979 AAAACGGTTGAAAGAAAAGCTTTTCTTGCAACACCAGAGCATCAATATCATGTATCATAATGAAG
130 AAAACAGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG
* * * * * *
57044 GGAATGCGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGGTATGAGAATCAACGCATGCCT
195 GGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCT
* * *
57109 TATTTAAGGGATGAA-TATTGATTTCAAGGAAAATAAGGCAAAGGAAACATTTCCGTGCAAAAGA
260 TATTTAAGGGATGAACT-TTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGA
* *
57173 AAATCATCAATATCATTTACCCTCATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATTAAT
324 AAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * *
57238 GAAGACCATTACTAGAATCCTTGTTTGTCTCATTTGAGGCACAAACTTAGACATTATAAAAATTG
389 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTG
57303 GTGGGAAGAAAGCCTTTCTTGCG
454 GTGGGAAGAAAGCCTTTCTTGCG
* * * * * * *
57326 AAACCAAAGTGTCAGTATCATGTATCCTTACGTGAAGACTATGTTTACGATGCCTAATCCTGAAA
1 AAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAA
* * *
57391 ACAATGGGGATTAGTATGACTATTCATATTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAA
66 AGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * *
57456 AAACAGTTGAAAGAAAAGCTTTTCTTACGACACCAAAGGATCAGTGTCATGTATCCTAATGAAGG
131 AAACAGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGG
** * *
57521 GAATGTGTTTTTGGTTCCCAATCAAGAAAAGAATGGAGACTGTTACGAGAATCAACGCTGGCCTT
196 GAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTT
* * *
57586 ATTTAAGTGATGAAATTTGATTTTGAGGAAAATAGGGCAAAGGAAACACTTT-CATGCAAAAGAA
261 ATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACA-TTTCCATGCAAAAGAA
*
57650 AATCATCAATATCATTTACCCTAATTGCA-GAGAATGTGTTTATA-TCACCTAATCACAAAATGA
325 AATCATCAATATCATTTACCCTAA-TG-AGGAGAATGTGTTTATAGT-GCCTAATCACAAAATGA
*
57713 ATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAAT
387 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAAT
*
57778 TGGTGGGAAGAAAGCCTTTATT-CTG
452 TGGTGGGAAGAAAGCCTTTCTTGC-G
* * * *
57803 AAACCAAAGCGTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGATGCCTAATCCTAAAA
1 AAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAA
* * * *
57868 ACAATGAGGATTAGTATGACTATTCATGTTTATCTTATTCAAGAGACAAACTTTGATTCTATCAA
66 AGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
*** *
57933 AAGTGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGCCATGTATCCTAATGAAGG
131 AAACAGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGG
* * *
57998 GAATGTGTTCTTGGTTCCCAATCTTGAAAAGATTGGAGACTGTTACGAGAATCAATGCTTACCTT
196 GAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTT
*
58063 ATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATAAA
261 ATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAA
** *
58128 ATCATCAATATCATTTTTCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCACAAAATGAATGA
326 ATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
* * * * * * * *
58193 AGATCATTACTAGAATCTATGTTTGACTTATTTAAGGCACAAACTTACACTTTACAAAAATTGGT
391 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGT
58258 GGGAAGAAAGCCTTTCTTGCG
456 GGGAAGAAAGCCTTTCTTGCG
* * * * * *
58279 AAACTAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGGGCCTAATCTTGAAA
1 AAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAA
* * * * * *
58344 AGATTGGGGATTAGTATGACTGTTCCA-GTTTGACATATTTAAGAGAGAAAACTTTGATTCTAAC
66 AGAATGGGGATTAGTATGACTATT-CATGTTTGTCTTATTTAAGAGA-CAAACTTTGATTCTATC
* * * * *
58408 AAAAACGGTGGTAAGAAAAGCATTTT-TTGCAACACCAAAGCATTAATGT
129 AAAAACAGTTGAAAGAAAAGC-TTTTCTTGCGACACCAAAGCATCAATGT
58457 TATTAAGCTT
Statistics
Matches: 2232, Mismatches: 282, Indels: 72
0.86 0.11 0.03
Matches are distributed among these distances:
466 76 0.03
467 75 0.03
468 1 0.00
470 1 0.00
472 1 0.00
473 251 0.11
474 353 0.16
475 432 0.19
476 549 0.25
477 488 0.22
478 5 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (476 bp):
AAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAA
AGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
AAACAGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGG
GAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTT
ATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAA
ATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGT
GGGAAGAAAGCCTTTCTTGCG
Found at i:58684 original size:21 final size:21
Alignment explanation
Indices: 58660--58702 Score: 61
Period size: 21 Copynumber: 2.0 Consensus size: 21
58650 CAAAGTAAAA
58660 ATACGTAAT-GTATCAATACAT
1 ATAC-TAATGGTATCAATACAT
*
58681 ATACTATTGGTATCAATACAT
1 ATACTAATGGTATCAATACAT
58702 A
1 A
58703 AGGTTGACTT
Statistics
Matches: 20, Mismatches: 1, Indels: 2
0.87 0.04 0.09
Matches are distributed among these distances:
20 3 0.15
21 17 0.85
ACGTcount: A:0.42, C:0.14, G:0.09, T:0.35
Consensus pattern (21 bp):
ATACTAATGGTATCAATACAT
Found at i:58848 original size:10 final size:10
Alignment explanation
Indices: 58833--58860 Score: 56
Period size: 10 Copynumber: 2.8 Consensus size: 10
58823 AATCTCATTT
58833 TCACTGTTTA
1 TCACTGTTTA
58843 TCACTGTTTA
1 TCACTGTTTA
58853 TCACTGTT
1 TCACTGTT
58861 AATGTATCGA
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
10 18 1.00
ACGTcount: A:0.18, C:0.21, G:0.11, T:0.50
Consensus pattern (10 bp):
TCACTGTTTA
Found at i:59411 original size:36 final size:33
Alignment explanation
Indices: 59366--59458 Score: 118
Period size: 36 Copynumber: 2.8 Consensus size: 33
59356 CGAAGTGATT
59366 GAGAGGTTCTATCTTAGCCTTTGAAAAAGATAGGG
1 GAGAGGTTCTATCTTAGCC-TTGAAAAAGATA-GG
*
59401 AGAGAGGTTCTATCTTAGCCCGTG-AAAAGATAGG
1 -GAGAGGTTCTATCTTAG-CCTTGAAAAAGATAGG
*
59435 GAG-GTTTCTATCTTAGCCTTGAAA
1 GAGAGGTTCTATCTTAGCCTTGAAA
59459 GATAGTGTTG
Statistics
Matches: 52, Mismatches: 3, Indels: 8
0.83 0.05 0.13
Matches are distributed among these distances:
31 4 0.08
32 14 0.27
33 3 0.06
34 2 0.04
35 8 0.15
36 19 0.37
37 2 0.04
ACGTcount: A:0.30, C:0.14, G:0.27, T:0.29
Consensus pattern (33 bp):
GAGAGGTTCTATCTTAGCCTTGAAAAAGATAGG
Found at i:60598 original size:316 final size:319
Alignment explanation
Indices: 60152--60822 Score: 919
Period size: 316 Copynumber: 2.1 Consensus size: 319
60142 AAATGGTTGA
* * * *
60152 AAGAAACGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGAGATTGTGTTT
1 AAGAAA-GCCTTTCTTGCGACACCAAAGCATCAATGCCATGTATCCTAATGAAGAGAATGGGTTT
** *
60217 TTGGTTTCCAATCTTGAAAAGATTGGAGACTGTTACGAGAATCAATGCTTACCTTATTTAAGGGA
65 TTGGTACCCAATCTTGAAAAGATTGGAGACTGTTACGAGAATCAATGCTTACCTTATTAAAGGGA
* * *
60282 TAAAGTTTGATTTTAAGGAAATTACGGCAAAGGAAAC-TTTTCCATGTAAAATAAAATCATCAAT
130 TAAACTTTGATTTTAAGGAAAATACGGCAAAGGAAACATTTT-CATGCAAAATAAAATCATCAAT
* ** *
60346 ATCATTTATCCTAATGAGAAGAATTTGTTTATTGTGCCTAATCCCAAAATGAATGAAGATCATTA
194 ATCATTTATCCTAATGAGAAGAATGTGTTTATAATGCCTAATCACAAAATGAATGAAGATCATTA
* * *
60411 CTAGATTCCATGATT-ATCTCATTTGAGGCACA-AACTTAGACTTTACAAAAATTGG-TGG-G-
259 CAAGAATCCAT-ATTGA-CTCATTTGAGGCA-AGAACTTACACTTTACAAAAATTGGTTGGTGT
60470 AAGAAAGCCTTTCTTGCGACACCAAAGCATCAATGCCATGTAT-CTAATGAA-AGGAATGGGTTT
1 AAGAAAGCCTTTCTTGCGACACCAAAGCATCAATGCCATGTATCCTAATGAAGA-GAATGGGTTT
* *
60533 TTGGTACCCAATCTTGAAAATGA-TGGAGACTGTTACGAGAATCAATGCTTGCCTTCTTAAAGGG
65 TTGGTACCCAATCTTGAAAA-GATTGGAGACTGTTACGAGAATCAATGCTTACCTTATTAAAGGG
* ** *
60597 ATGAACTTTGATTTTATTGAAAATAGGGCAAAGGAAACATTTTCATGCAAAATAAAATCATCAAT
129 ATAAACTTTGATTTTAAGGAAAATACGGCAAAGGAAACATTTTCATGCAAAATAAAATCATCAAT
* * * * *
60662 ATCATTTATCCTAATGAGGAGAATGTGTTTATAATGCCTAATCATAAAATGGATGAAGTTCATTT
194 ATCATTTATCCTAATGAGAAGAATGTGTTTATAATGCCTAATCACAAAATGAATGAAGATCATTA
* *
60727 CAAGAATCCATTTTGACTCATTTGAGGCAAGAACTTACATTTTACAAAAATTGGTTGGTTGT
259 CAAGAATCCATATTGACTCATTTGAGGCAAGAACTTACACTTTACAAAAATTGGTTGG-TGT
* *
60789 AAGAAAGCCTTTCTTGCGAAACCAAAGTATCAAT
1 AAGAAAGCCTTTCTTGCGACACCAAAGCATCAAT
60823 ATCGTCAATC
Statistics
Matches: 312, Mismatches: 32, Indels: 17
0.86 0.09 0.05
Matches are distributed among these distances:
314 1 0.00
315 37 0.12
316 194 0.62
317 41 0.13
318 7 0.02
319 32 0.10
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.32
Consensus pattern (319 bp):
AAGAAAGCCTTTCTTGCGACACCAAAGCATCAATGCCATGTATCCTAATGAAGAGAATGGGTTTT
TGGTACCCAATCTTGAAAAGATTGGAGACTGTTACGAGAATCAATGCTTACCTTATTAAAGGGAT
AAACTTTGATTTTAAGGAAAATACGGCAAAGGAAACATTTTCATGCAAAATAAAATCATCAATAT
CATTTATCCTAATGAGAAGAATGTGTTTATAATGCCTAATCACAAAATGAATGAAGATCATTACA
AGAATCCATATTGACTCATTTGAGGCAAGAACTTACACTTTACAAAAATTGGTTGGTGT
Found at i:61275 original size:797 final size:786
Alignment explanation
Indices: 59712--62092 Score: 3129
Period size: 797 Copynumber: 3.0 Consensus size: 786
59702 TGAGCTAACA
* * * * *
59712 AATGTCATGTATCCTAAT-AAAGGGAATGTGTTCTTGGTTCCCAATCTTGAGAA-GAATAGAGAC
1 AATGTCATGTAT-CTAATGAAA-GGAATGGGTTTTTGGTACCCAATCTTGAAAATG-ATGGAGAC
* * * * * * *
59775 AGTTACGAGAATCGA-GACTTGTCATACTTAAGTGAAGAAATTTGATTTTAAAGAAAATAGGGCA
63 TGTTACGAGAATCAATG-CTTG-CCTTCTTAAGGGATGAACTTTGATTTTAAAGAAAATAGGGCA
* * * *
59839 AAGAAAAGATTTTCATGC-TAATGAAAATAATCAATAACATTTAT-C-ATGAGGTAGAATTTGTT
126 AAGGAAACATTTTCATGCATAAT-AAAATAATCAATATCATTTATCCTATGAGG-AGAATGTGTT
* * *
59901 TACAGTGCCTAATCACAAAATGAATGAAGATCATTACTAA-AATCCATGTTT--CTCTTTTGAGG
189 TATAGTGCCTAATCACAAAATGAATGAAGTTCATTAC-AAGAATCCATGTTTGACTCATTTGAGG
* * *
59963 CATGAACTTACACTTTACAAAAATTGGTGGGACGAAAGCCTTTCTTATGAAACCAAAGTGTCAAT
253 CAAGAACTTACACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTATGAAACCAAAGTATCAAT
* * * * *
60028 ATCGTGTATCCTTATGAGAAGACTATGATTATTGTGCCAAATCCTGAAAAGAATGGCTGAATAGT
318 ATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATGG--GATTAGT
* * *
60093 ATGACTATTCATGTTTGTCTTGTTTAAGAGACAAAATTTGATTCTA-ATAAAATGGTTGAAAGAA
381 ATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTACA-AAAACGGTTGAAAGAA
*
60157 ACGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGAGATTGTGTTTTTGGT
445 A-GCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GAATGTGTTTTTGGT
* * * * *
60222 TTCCAATCTTGAAAAGATTGGAGACTGTTACGAGAATCAATGCTTACCTTATTTAAGGGATAAAG
508 TCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTACCTTATTTAAGAGATGAAC
* * * * *
60287 TTTGATTTTAAGGAAATTACGGCAAAGGAAACTTTTCCATGTAAAATAAAATCATCAATATCATT
573 TTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATAAAATCATCAATATCATT
* * * * * *
60352 TATCCTAATGAGAAGAATTTGTTTATTGTGCCTAATCCCAAAATGAATGAAGATCATTACTAGAT
638 TATCCCAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAA
* *
60417 TCCATGATTATCTCATTTGAGGCACAAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTT
703 TCCATGATTATCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGGGAAGAAAGCCTTT
60482 CTTGCGACACCAAAGCATC
768 CTTGCGACACCAAAGCATC
*
60501 AATGCCATGTATCTAATGAAAGGAATGGGTTTTTGGTACCCAATCTTGAAAATGATGGAGACTGT
1 AATGTCATGTATCTAATGAAAGGAATGGGTTTTTGGTACCCAATCTTGAAAATGATGGAGACTGT
**
60566 TACGAGAATCAATGCTTGCCTTCTTAAAGGGATGAACTTTGATTTTATTGAAAATAGGGCAAAGG
66 TACGAGAATCAATGCTTGCCTTCTT-AAGGGATGAACTTTGATTTTAAAGAAAATAGGGCAAAGG
* * *
60631 AAACATTTTCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAA
130 AAACATTTTCATGCATAATAAAATAATCAATATCATTTATCCT-ATGAGGAGAATGTGTTTATAG
* * *
60696 TGCCTAATCATAAAATGGATGAAGTTCATTTCAAGAATCCAT-TTTGACTCATTTGAGGCAAGAA
194 TGCCTAATCACAAAATGAATGAAGTTCATTACAAGAATCCATGTTTGACTCATTTGAGGCAAGAA
* **
60760 CTTACATTTTACAAAAATTGGTTGGTTGTAAGAAAGCCTTTCTTGCGAAACCAAAGTATCAATAT
259 CTTACACTTTACAAAAATTGG-TGG--G-AAGAAAGCCTTTCTTATGAAACCAAAGTATCAATAT
** * *
60825 CGTCAATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAAGAATTGGGATTAGTGT
320 CGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCT-AAAAAGAA-TGGGATTAGTAT
* * *
60890 GACTATTCTTGTTTGTCTTATTTAAGAGAGCAAACTTTGATTCTATCAAAAACGGTGGAAAGACT
383 GACTATTCATGTTTGTCTTATTTAAGAGA-CAAACTTTGATTCTA-CAAAAACGGTTGAAAGA-A
* * *
60955 AGCTTTTCTTGTGACCCCAAAGCATCAATGTCATGTATCCTAATGAATGGAATGTGTTCTTGGTT
445 AGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA-GGAATGTGTTTTTGGTT
** * * * *
61020 CCCTCTCTTGAAAAAAATGGAGTCTATTATGAGAATCAATGCTTACCTTATTTAAGAGATGAACT
509 CCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTACCTTATTTAAGAGATGAACT
* * *
61085 TTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCAATATCATTT
574 TTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATAAAATCATCAATATCATTT
*
61150 ATCCCAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGATCATTACTAGAAT
639 ATCCCAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAAT
* * * * *
61215 CCATG-TGTTTCTCCTTTGAGGCACGAACTTACATTTTATAAAAATTGGTTGGAAGAAAGCCTTT
704 CCATGAT-TATCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGGGAAGAAAGCCTTT
61279 CTTGCGACACCAAAGCATC
768 CTTGCGACACCAAAGCATC
* * *
61298 AATGTCATGTATCTAATGAAGGGAATAGGTTTTTGGTACCCAATCTTGAAAATAATGGAGACTGT
1 AATGTCATGTATCTAATGAAAGGAATGGGTTTTTGGTACCCAATCTTGAAAATGATGGAGACTGT
* * * *
61363 TATGAGAATCAATGCTTGCCTTATTTAAGGGGTGAACTTTGATTTTAAGGAAAATAGGGCAAAGG
66 TACGAGAATCAATGCTTGCCTT-CTTAAGGGATGAACTTTGATTTTAAAGAAAATAGGGCAAAGG
* * * *
61428 AAACATTTTCATGCATAAGAAAATTATCAATATCATTTACCCTTATGAGGAGAATGGGTTTATAG
130 AAACATTTTCATGCATAATAAAATAATCAATATCATTTATCC-TATGAGGAGAATGTGTTTATAG
* * * * * * *
61493 CGCCTAATCACAAAATGAAAGAAGTTAAATACTAGAATCCATGATTGTA-TCATTTGAGGCACGA
194 TGCCTAATCACAAAATGAATGAAGTTCATTACAAGAATCCATGTTTG-ACTCATTTGAGGCAAGA
* * * * *
61557 ACTTAGACTTTATAAAAATTGGTGGGAAGAAAGCCTTTCTTATGAACCCAAAGCATCAATATCAT
258 ACTTACACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTATGAAACCAAAGTATCAATATCGT
* * * * * * *
61622 GTATCCTTCTGAGAAGACTATGTTTATGTTACCTAATCCTGAAAAA-AAGGGGGATTAATTTGAG
323 GTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCT-AAAAAGAA-TGGGATTAGTATGAC
*
61686 TATTCATGTTTGTGTTATTTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCT
386 TATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCT-ACAAAAACGGTTGAAAG-AAAGCT
*
61751 TTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGAAATGTGTTTTTGGTACCCA
449 TTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGG-AATGTGTTTTTGGTTCCCA
* *
61816 ATCTTGAAATGAATGGACACTGTTACGAGAATCAATGCTTACCTTATTTAA-AGGATGAACTTTG
513 ATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTACCTTATTTAAGA-GATGAACTTTG
* * *
61880 ATTTTAATGAAAATAGTGCAAAGAAAACATTTTCATGCAAAATAAAATCATCAATATCATTTA-C
577 ATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATAAAATCATCAATATCATTTATC
* * *
61944 CCTAGTGAGGGGAATGTGTTTATAGTGCCTAATCACAAAATTAATGAAGATCATTACTAGAATCC
642 CC-AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCC
* * * * *
62009 ATGATTGTCTCATTTGAGGCACGGACTTAGACTTTATAAAACTTGGTGGGAAAAAAGCTTTTCTT
706 ATGATTATCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGGGAAGAAAGCCTTTCTT
* *
62074 GCGAAACCAAAGCGTC
771 GCGACACCAAAGCATC
62090 AAT
1 AAT
62093 ACGGTATATC
Statistics
Matches: 1391, Mismatches: 168, Indels: 63
0.86 0.10 0.04
Matches are distributed among these distances:
787 5 0.00
788 121 0.09
789 25 0.02
790 47 0.03
791 47 0.03
792 334 0.24
793 40 0.03
794 74 0.05
795 104 0.07
796 22 0.02
797 529 0.38
798 42 0.03
799 1 0.00
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.32
Consensus pattern (786 bp):
AATGTCATGTATCTAATGAAAGGAATGGGTTTTTGGTACCCAATCTTGAAAATGATGGAGACTGT
TACGAGAATCAATGCTTGCCTTCTTAAGGGATGAACTTTGATTTTAAAGAAAATAGGGCAAAGGA
AACATTTTCATGCATAATAAAATAATCAATATCATTTATCCTATGAGGAGAATGTGTTTATAGTG
CCTAATCACAAAATGAATGAAGTTCATTACAAGAATCCATGTTTGACTCATTTGAGGCAAGAACT
TACACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTATGAAACCAAAGTATCAATATCGTGTA
TCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGATTAGTATGACTATTC
ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTACAAAAACGGTTGAAAGAAAGCTTTTCTTG
CGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGAATGTGTTTTTGGTTCCCAATCTTGAA
AAGAATGGAGACTGTTACGAGAATCAATGCTTACCTTATTTAAGAGATGAACTTTGATTTTAAGG
AAAATAGGGCAAAGAAAACATTTCCATGCAAAATAAAATCATCAATATCATTTATCCCAATGAGG
AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGATTATCT
CATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGACACCAA
AGCATC
Found at i:61401 original size:316 final size:316
Alignment explanation
Indices: 60959--61626 Score: 984
Period size: 316 Copynumber: 2.1 Consensus size: 316
60949 AAGACTAGCT
* * * *
60959 TTTCTTGTGACCCCAAAGCATCAATGTCATGTATCCTAATGAATGGAATGTGTTCTTGGTTCCCT
1 TTTCTTGTGACACCAAAGCATCAATGTCATGTAT-CTAATGAAGGGAATGTGTTCTTGGTACCCA
* *
61024 CTCTTGAAAAAAATGGAGTCTATTATGAGAATCAATGCTTACCTTATTTAAGAGATGAACTTTGA
65 ATCTTGAAAAAAATGGAGACTATTATGAGAATCAATGCTTACCTTATTTAAGAGATGAACTTTGA
*
61089 TTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCAATATCATTTATCC
130 TTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAGAAAATTATCAATATCATTTA-CC
* * * *
61154 C-AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGATCATTACTAGAATCCA
194 CTAATGAGGAGAATGGGTTTATAGCGCCTAATCACAAAATGAAAGAAGATAAATACTAGAATCCA
* * * * *
61218 TG-TGTTTCTCCTTTGAGGCACGAACTTACATTTTATAAAAATTGGTTGGAAGAAAGCC
259 TGAT-TGTATCATTTGAGGCACGAACTTACACTTTATAAAAATTGGTGGGAAGAAAGCC
* *
61276 TTTCTTGCGACACCAAAGCATCAATGTCATGTATCTAATGAAGGGAATAG-GTTTTTGGTACCCA
1 TTTCTTGTGACACCAAAGCATCAATGTCATGTATCTAATGAAGGGAAT-GTGTTCTTGGTACCCA
* * * * *
61340 ATCTTGAAAATAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGGTGAACTTTGA
65 ATCTTGAAAAAAATGGAGACTATTATGAGAATCAATGCTTACCTTATTTAAGAGATGAACTTTGA
* * *
61405 TTTTAAGGAAAATAGGGCAAAGGAAACATTTTCATGCATAAGAAAATTATCAATATCATTTACCC
130 TTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAGAAAATTATCAATATCATTTACCC
* *
61470 TTATGAGGAGAATGGGTTTATAGCGCCTAATCACAAAATGAAAGAAGTTAAATACTAGAATCCAT
195 TAATGAGGAGAATGGGTTTATAGCGCCTAATCACAAAATGAAAGAAGATAAATACTAGAATCCAT
*
61535 GATTGTATCATTTGAGGCACGAACTTAGACTTTATAAAAATTGGTGGGAAGAAAGCC
260 GATTGTATCATTTGAGGCACGAACTTACACTTTATAAAAATTGGTGGGAAGAAAGCC
* *
61592 TTTCTTATGA-ACCCAAAGCATCAATATCATGTATC
1 TTTCTTGTGACA-CCAAAGCATCAATGTCATGTATC
61627 CTTCTGAGAA
Statistics
Matches: 315, Mismatches: 32, Indels: 9
0.88 0.09 0.03
Matches are distributed among these distances:
315 4 0.01
316 277 0.88
317 34 0.11
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (316 bp):
TTTCTTGTGACACCAAAGCATCAATGTCATGTATCTAATGAAGGGAATGTGTTCTTGGTACCCAA
TCTTGAAAAAAATGGAGACTATTATGAGAATCAATGCTTACCTTATTTAAGAGATGAACTTTGAT
TTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAGAAAATTATCAATATCATTTACCCT
AATGAGGAGAATGGGTTTATAGCGCCTAATCACAAAATGAAAGAAGATAAATACTAGAATCCATG
ATTGTATCATTTGAGGCACGAACTTACACTTTATAAAAATTGGTGGGAAGAAAGCC
Found at i:61903 original size:159 final size:157
Alignment explanation
Indices: 60129--65777 Score: 823
Period size: 159 Copynumber: 35.6 Consensus size: 157
60119 AGAGACAAAA
* * * * *
60129 TTTGATTCTAAT-AAAATGGTTG-AAAGAAACGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
1 TTTGATTTTAATGAAAATAG-TGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * *
60192 GTATCCTAATGAAGAGATTGTGTTTTTGGTTTCC-AATCTTGAAAAGATTGGAGACTGTTACGAG
65 GTATCCTAATGAGGA-AATGTGTTTTTGG-TGCCTAATCTTGAAATGAATGGAGACTGTTACGAG
* *
60256 AATCAATGCTTACCTTATTTAAGGGATAAAG
128 AATCAATGCTTACCTTATTTAA-GGATGAAC
* * * * ** ** *
60287 TTTGATTTTAAGGAAATTACG-GCAAAGGAAA-CTTTTCCATGTAAAATAAAATCATCAATATCA
1 TTTGATTTTAATGAAAATA-GTGCAAAGAAAAGCTTTT-CTTGCGAAACCAAAGCATCAATATCA
* * * *** * * *
60350 TTTATCCTAATGAGAAGAATTTGTTTATT-GTGCCTAATCCCAAAATGAATGAAGA-TCATTACT
64 TGTATCCTAATGAGGA-AATGTGTTT-TTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACG
* * * * * * **
60413 AGATTCCATGATTATCTCATTTGAGGCACAAAC
126 AGAATCAATGCTTACCTTATTTAAGG-ATGAAC
* * * ** * * **
60446 TTAGACTTTACA--AAAATTGGTGGGAAG-AAAGCCTTTCTTGCGACACCAAAGCATCAATGCCA
1 TTTGATTTTA-ATGAAAA-TAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCA
* * *
60508 TGTAT-CTAATGAAAGG-AATGGGTTTTTGGTACCCAATCTTGAAAATG-ATGGAGACTGTTACG
64 TGTATCCTAATG--AGGAAATGTGTTTTTGGTGCCTAATCTTG-AAATGAATGGAGACTGTTACG
* * *
60570 AGAATCAATGCTTGCCTTCTTAAAGGGATGAAC
126 AGAATCAATGCTTACCTTATTTAA-GGATGAAC
* * * * * ** *
60603 TTTGATTTTATTGAAAATAGGGCAAAGGAAA-CATTTTCATGCAAAATAAAATCATCAATATCAT
1 TTTGATTTTAATGAAAATAGTGCAAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATATCAT
* * ** * * * * * *
60667 TTATCCTAATGAGGAGAATGTGTTTATAATGCCTAATCATAAAATGGATGAAGTTCAT-TT-CAA
65 GTATCCTAATGAGGA-AATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAG-AC-TGTTACGA
* * * * *
60730 GAATCCAT-TTTGA-CTCATTTGAGGCAAGAAC
127 GAATCAATGCTT-ACCTTATTTAAGG-ATGAAC
** * ** * *
60761 TTACATTTTACA--AAAATTGGTTGGTTGTAAG-AAAGCCTTTCTTGCGAAACCAAAGTATCAAT
1 TTTGATTTTA-ATGAAAA-TAG-T-G--CAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAAT
* ** * * ** * *
60823 ATCGTCAATCCTAATGA-GAAGACTATGTTTATGGTGCCTAATCCTAAAAAAGAATTGG-GATTA
60 ATCATGTATCCTAATGAGGAA-A-TGTGTTTTTGGTGCCTAAT-CTTGAAATGAA-TGGAGACT-
* * * * **
60886 GTGT--GACTATTC-TTGTTTGTCTTATTTAAGAGA-GCAAAC
120 GT-TACGA-GAATCAATGCTTACCTTATTTAAG-GATG--AAC
* * * ** * ** *
60925 TTTGATTCT-ATCAAAA-ACGGTGGAAAGACTAGCTTTTCTTGTGACCCCAAAGCATCAATGTCA
1 TTTGATTTTAATGAAAATA--GTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCA
* * * ** * * *
60988 TGTATCCTAATGAATGG-AATGTGTTCTTGGTTCCCT-CTCTTGAAAAAAATGGAGTCTATTATG
64 TGTATCCTAATG-A-GGAAATGTGTTTTTGG-TGCCTAATCTTGAAATGAATGGAGACTGTTACG
61051 AGAATCAATGCTTACCTTATTTAAGAGATGAAC
126 AGAATCAATGCTTACCTTATTTAAG-GATGAAC
* * * * * * ** ** *
61084 TTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATTATCAATATCATT
1 TTTGATTTTAATGAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATG
* * * *** * * * *
61149 TATCCCAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAAGAAGA-TCATTACTAGA
66 TATCCTAATGAGGA-AATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACGAGA
* ** ** * *
61213 ATCCATG-TGTTTCTCCTTTGAGGCACGAAC
129 ATCAATGCT-TACCTTATTTAAGG-ATGAAC
** * * * * * *
61243 TTACATTTT-ATAAAAATTGGTTG-GAAG-AAAGCCTTTCTTGCGACACCAAAGCATCAATGTCA
1 TTTGATTTTAATGAAAA-TAG-TGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCA
* * * *
61305 TGTAT-CTAATGAAGGGAATAG-GTTTTTGGTACCCAATCTTGAAAAT-AATGGAGACTGTTATG
64 TGTATCCTAATG-AGGAAAT-GTGTTTTTGGTGCCTAATCTTG-AAATGAATGGAGACTGTTACG
* *
61367 AGAATCAATGCTTGCCTTATTTAAGGGGTGAAC
126 AGAATCAATGCTTACCTTATTTAA-GGATGAAC
* * * * ** **
61400 TTTGATTTTAAGGAAAATAGGGCAAAGGAAA-CATTTTCATGC-ATAAGAAAATTATCAATATCA
1 TTTGATTTTAATGAAAATAGTGCAAAGAAAAGC-TTTTCTTGCGA-AACCAAAGCATCAATATCA
* * * * * * * *** * * * ** *
61463 TTTACCCTTATGAGGAGAATGGGTTTATAGCGCCTAATCACAAAATGAAAGAAG-TTAAATACTA
64 TGTATCCTAATGAGGA-AATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACGA
* * *** * * *
61527 GAATCCATGATTGTATCATTTGAGGCACGAAC
127 GAATCAATGCTTACCTTATTTAAGG-ATGAAC
* * * * ** * ** *
61559 TTAGACTTT-ATAAAAATTGGTGGGAAG-AAAGCCTTTCTTATGAACCCAAAGCATCAATATCAT
1 TTTGATTTTAATGAAAA-TAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
** * * * * * ** * * * * *
61622 GTATCCTTCTGA-GAAGACTATGTTTATGTTACCTAATCCTGAAAAAAAGGGGGATTAATT-TGA
65 GTATCCTAATGAGGAA-A-TGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACGA
* * *** **
61685 GTATTC-ATGTTTGTGTTATTTAAGAGACAAAC
127 G-AATCAATGCTTACCTTATTTAAG-GATGAAC
* ** ** * *
61717 TTTGATTCTAACAAAAACGGTTG-AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
1 TTTGATTTTAATGAAAATAG-TGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * *
61781 GTATCCTAATGAAGGAAATGTGTTTTTGGTACCCAATCTTGAAATGAATGGACACTGTTACGAGA
65 GTATCCTAATG-AGGAAATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACTGTTACGAGA
61846 ATCAATGCTTACCTTATTTAAAGGATGAAC
129 ATCAATGCTTACCTTATTT-AAGGATGAAC
* * ** *
61876 TTTGATTTTAATGAAAATAGTGCAAAGAAAA-CATTTTCATGCAAAATAAAATCATCAATATCAT
1 TTTGATTTTAATGAAAATAGTGCAAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * * *** * * * *
61940 TTACCCTAGTGAGGGGAATGTGTTTATAGTGCCTAATCACAAAATTAATGAAGA-TCATTACTAG
65 GTATCCTAATGA-GGAAATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACGAG
* * ** * * * *
62004 AATCCATGATTGTCTCATTTGAGGCACGGAC
128 AATCAATGCTTACCTTATTTAAGG-ATGAAC
* * * ** *
62035 TTAGACTTT-AT-AAAACTTGGTGGGAA-AAAAGCTTTTCTTGCGAAACCAAAGCGTCAATA-CG
1 TTTGATTTTAATGAAAA--TAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC-
* * * * * ** * * * * *
62096 GTATATCCTTATGA-GAAGACTATGTCTAGGGTGCCTAATCCTAAAAAGAATAGG-GATTAATT-
63 ATGTATCCTAATGAGGAA-A-TGTGTTTTTGGTGCCTAATCTTGAAATGAAT-GGAGACT-GTTA
* * * ** *
62158 TGAGTATTC-ATGTTTGTCTTATTTAAGAGATAAAC
124 CGAG-AATCAATGCTTACCTTATTTAAG-GATGAAC
* ** * * ** *
62193 TTTGATTCTAACAAAAACAGTTG-AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAACGTCGT
1 TTTGATTTTAATGAAAATAG-TGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * * * *
62257 GTATCCAAATGAAGGAAATGCGTGTTTGGTACCCAATCTTAAAATGAATGGAGACTGTAATGAGA
65 GTATCCTAATG-AGGAAATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACTGTTACGAGA
* *** *
62322 ATCGATGC-TGGTTATATTTAAGGGATGAAT
129 ATCAATGCTTACCT-TATTTAA-GGATGAAC
* * * * * * ** * *
62352 TTTGATTTTAAGGAAAATAGGGCAAAGGAAA-CATTTCCATGCAAAATAAAATCATCTATATCAT
1 TTTGATTTTAATGAAAATAGTGCAAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * ** * * * *
62416 ATATCCTAATGAGGAAAATGTGTTTATT-ATGCCTTATC-ACAAACTAAATGAAGA-TCATTACT
65 GTATCCTAATGAGG-AAATGTGTTT-TTGGTGCCTAATCTTGAAA-TGAATGGAGACT-GTTACG
* * * * * *
62478 AGAATCCATGTTTGA-CTCATTTGAGGCACGGAC
126 AGAATCAATGCTT-ACCTTATTTAAGG-ATGAAC
* ** * * ** * * * *
62511 ATACATTTTACA--AAACTTGGTGGGAAG-AAAGCCTTTCTTACGAAACCAAAGCATCAAAATCG
1 TTTGATTTTA-ATGAAA-ATAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCA
* * * * ** * * * * * * *
62573 TGCATCCTTATGAGAAAACTATGTTTACGGTACCTAATCCTAAAAAGAA-CGAGGATTAG-TATG
64 TGTATCCTAATGAGGAAA-TGTGTTTTTGGTGCCTAATCTTGAAATGAATGGA-GACT-GTTACG
*** * *
62636 ACTTTTC-ATGTTTATCTTATTTTAGAGGCA--AAC
126 A-GAATCAATGCTTACCTTA-TTTA-AGG-ATGAAC
* * * * * * *** **
62669 TCTAATTCT-ATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGC-AACACCAAAATGTCAACGTCA
1 TTTGATTTTAAT-GAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATATCA
* * * * *
62732 TGTATCCTAATGTAGGAAATGTGTTTTTGCTACCCAATCTTGATATGAATGGAGACTGTTGCGAG
64 TGTATCCTAATG-AGGAAATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACTGTTACGAG
** * *** * * *
62797 AATTGATACTGGTCATATTTATGGGATGAAT
128 AATCAATGCTTACCTTATTTA-AGGATGAAC
* ** * * ** *
62828 TTTGATTTTAACT-AAAATAGGGCAAAGAAAATATTTCCATGC-AAAAAAAATCATCAATATCAT
1 TTTGATTTTAA-TGAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * *** * * * *
62891 TTATCCTAATGCGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAGTGAAGA-TCATTACTAG
65 GTATCCTAATGAGGA-AATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACGAG
* * ** * * *
62955 AATCCATGATTGTCTCATTTGAGGCACGAAC
128 AATCAATGCTTACCTTATTTAAGG-ATGAAC
* * * * ** * * *
62986 TTAGACTTT-ATAAAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAAGCAAAGCATCAATATCGT
1 TTTGATTTTAATGAAAA-TAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * * * * *
63049 CTATCCTAATGA-GAAGACTATGTTTATGGTGCCTCATCCTGAAAAGAATTAGGATTAGTGTGAC
65 GTATCCTAATGAGGAA-A-TGTGTTTTTGGTGCCTAATCTTGAAATGAA-T-GGA-GACTGTTAC
* * * **
63113 --TATTCTTAT--TTGTCTTATTTAAGAGA-GCAAAC
125 GAGAATC-AATGCTTACCTTATTTAAG-GATG--AAC
* * * * * * * ** * *
63145 TTTGATTCT-ATCAAAAATGGTGGAAAGAATAGCTTTGCTTACGACCCCAAA-AATCAATGTCAT
1 TTTGATTTTAAT-GAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * * *
63208 GTTTCCTAATGAATGG-AATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGTCTATTACGAG
65 GTATCCTAATG-A-GGAAATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACTGTTACGAG
* *
63272 AGTCAATGCTTACCTTATATAAGGGATGAAC
128 AATCAATGCTTACCTTATTTAA-GGATGAAC
* * * * * * * ** *
63303 TTTAATTTTAAGGAAAATAGGGCAAAGAAAGGATTTCCATGC-AAATGAAAATCATCAATATCAT
1 TTTGATTTTAATGAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAA-CCAAAGCATCAATATCAT
* **** *** * * *
63367 -TCATCCTAATAAGGAGAATGTGTTTACAATGCCTAATCACAAAATGAATGAAGA-TCATTACTA
65 GT-ATCCTAATGAGGA-AATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACGA
* * * * *
63430 GAATCCAT-TTTTCTCTCT-TTTGAGGCACGAACC
127 GAATCAATGCTTAC-CT-TATTTAAGG-ATGAA-C
* * * * * ** * * *
63463 TATG-CTATACA--AAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAAGCAAAGCATCAATATCGT
1 TTTGATTTTA-ATGAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * * * * *
63524 CTATCCTAATGA-GAAGACTATGTTTATGGTGCCTCATCCTGAAAAGAATTAGGATTAGTGTGAC
65 GTATCCTAATGAGGAA-A-TGTGTTTTTGGTGCCTAATCTTGAAATGAA-T-GGA-GACTGTTAC
* * ** **
63588 --TATTC--TTATTGTCTTATTTAAGAGA-GCAAAC
125 GAGAATCAATGCTTACCTTATTTAAG-GATG--AAC
* * * * * * ** * *
63619 TTTGATTCT-ATCAAAAATGGTG-AAAGAATAGC-TTGCTTACGACCCCAAA-AATCAATGTCAT
1 TTTGATTTTAAT-GAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * * *
63680 GTTTCCTAATGAATGG-AATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGTCTATTACGAG
65 GTATCCTAATG-A-GGAAATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACTGTTACGAG
* *
63744 AGTCAATGCTTACCTTATATAAGGGATGAAC
128 AATCAATGCTTACCTTATTTAA-GGATGAAC
* * * * * * * ** *
63775 TTTAATTTTAAGGAAAATAGGGCAAAGAAAGGATTTCCATGC-AAATGAAAATCATCAATATCAT
1 TTTGATTTTAATGAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAA-CCAAAGCATCAATATCAT
**** *** * * *
63839 -TCATCCTAATGAGGAGAATGTGTTTACAATGCCTAATCACAAAATGAATGAAGA-TCATTACTA
65 GT-ATCCTAATGAGGA-AATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACGA
* * * * *
63902 GAATCCAT-TTTTCTCTCT-TTTGAGGCACGAACC
127 GAATCAATGCTTAC-CT-TATTTAAGG-ATGAA-C
* * * * * ** * *
63935 TATG-CTATACA--AAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAACCAAAGCATTAATATCAT
1 TTTGATTTTA-ATGAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * * *
63996 GTATCCTTATGA-GAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATAGG-GATTAG-TATG
65 GTATCCTAATGAGGAA-A-TGTGTTTTTGGTGCCTAATCTTGAAATGAAT-GGAGACT-GTTACG
*** ** * ** * **
64058 ACTCTTTATGTTTGTCTTATTTAAAGACAAAC
126 AGAATCAATGCTTACCTTATTTAAGGATGAAC
* * * * * * * *
64090 TCTGATTTT-ATCAAAAATGGTGGAAAAAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCCT
1 TTTGATTTTAAT-GAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * * * *
64154 ATATCCTAAAGAAGGGAATGTGTCTTTAGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGA
65 GTATCCTAATG-AGGAAATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACTGTTACGAGA
* **
64219 ATTAATGCTTGTCTTATTTAAGGGATGAAC
129 ATCAATGCTTACCTTATTTAA-GGATGAAC
* * * * * * * ** * *
64249 TTTGATTTTTAGGAAAATAGGGCAAAGGAAA-CATTTCCATGCAAAATAAAATCATTAATATCAT
1 TTTGATTTTAATGAAAATAGTGCAAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATATCAT
* *** * * *
64313 TTATCCTAATGAGGAGAATGTGTTTCTT-GTGCCTAATCACAAAATGAATGAAGA-TCATTACTA
65 GTATCCTAATGAGGA-AATGTGTTT-TTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACGA
* * * *
64376 GAATCCATGTTTGA-CTCATTTGAGGCATGAAC
127 GAATCAATGCTT-ACCTTATTTAAGG-ATGAAC
** * ** * ** * * ** * *
64408 TTACA-CTTAACAAAAATTGGTGGGAAG-AAAGCCTTTCTTGCAAAACCAAAGTGTAAATATCGT
1 TTTGATTTTAATGAAAA-TAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * * * * * *
64471 GTATCCTTATGA-GAAGACTATGTTTATGGTGCCAAATCCTAAAAAGAATGGGGATTAG-TATGA
65 GTATCCTAATGAGGAA-A-TGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACGA
* * * *** * **
64534 CTATTC-ATGTTTGTATTATGTAAGAGACAAAC
127 -GAATCAATGCTTACCTTATTTAAG-GATGAAC
* ** *** ** * * *
64566 TTGGATACTAGCAAAAACGGTTG-AAAGAAAAGCTTTTCTTACG-ACCCAAAGCATCAATGTC-T
1 TTTGATTTTAATGAAAATAG-TGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * *
64628 GGTATCCTAATGAAGAGAATGTGTTTTTGCTTCCCAATCTTGGAAA-GAATGGAGACTATTGCGA
65 -GTATCCTAATGAGGA-AATGTGTTTTTGGTGCCTAATCTT-GAAATGAATGGAGACTGTTACGA
* *
64692 GAATCAATGCTTGCCTTTTTTAAGGGATGAAC
127 GAATCAATGCTTACCTTATTTAA-GGATGAAC
* * * * * * * ** * *
64724 TTTGATTTCAAGGAAAATAAG-GCAAAGGAAACCTTTCCATGCAAAAAAAAATCATCAATATCCT
1 TTTGATTTTAATGAAAAT-AGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * * * * * * *
64788 TTACCCTAATGAGGAGAATGTGTTTATAGTTCCTAAT-TAGAAAATTAAAGAAGA-TAATTACTA
65 GTATCCTAATGAGGA-AATGTGTTTTTGGTGCCTAATCTTG-AAATGAATGGAGACT-GTTACGA
* * ** ** * **
64851 GAATCCATGATTGTCACATTTTAGGCACAAAC
127 GAATCAATGCTTACCTTATTTAAGG-ATGAAC
* * * * ** ** *
64883 TTAGACTTT-ATAAAAATTGGTGGGAA-AAAAGCTTTTCTTGCGAAAGTAAAGCATCAATATCGT
1 TTTGATTTTAATGAAAA-TAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * * * * *
64946 CTATCCTAATGAGAAGACAA--CGTTTATGGCGCCTAATCCTGAAAAGAATGGGGATTAG-TATG
65 GTATCCTAATGAG--GA-AATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACG
* * * ** *
65008 ACTATTC-ATGTTTGTCTTATTTAA-GAGGCAAAC
126 A-GAATCAATGCTTACCTTATTTAAGGATG--AAC
* * * ** * * * *
65041 TTTGATTCT-ATCAAAA-AGGTGGAAAGAAAAGCTTTTCTTTTGACACCAAGGGATCAATGTCAT
1 TTTGATTTTAATGAAAATA-GTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * * * *
65104 GTATCCTAATGAATGG-AATGTGTTCTTGGT-TCTCATTCTTGAAA-AAATGGAGATTGTTATGA
65 GTATCCTAATG-A-GGAAATGTGTTTTTGGTGCCT-AATCTTGAAATGAATGGAGACTGTTACGA
* * *** * * *
65166 GAATCGATACTGGTCATATTTAAGGGATAAAT
127 GAATCAATGCTTACCTTATTTAA-GGATGAAC
* ** * * * ** *
65198 TTTGATTTTAA-GAAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCAT
1 TTTGATTTTAATG-AAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCAT
* * * *** * * * *
65262 TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA-TCATTACTAA
65 GTATCCTAATGAGGA-AATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACT-GTTACGAG
** * * *
65326 AATCCTTGTTTGACAC--ATTTGAGGCAAGAAC
128 AATCAATGCTT-AC-CTTATTTAAGG-ATGAAC
* * * ** *
65357 TTAT-ACTTT-ACGAAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAAATATC
1 TT-TGATTTTAATGAAAA-TAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATC-AATATC
* * * * * * ** *
65419 GTCTATCCTAA-CAAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAAAATGGAGATTAGTATG
63 ATGTATCCTAATGAGGAA-A-TGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACT-GT-T-
* *
65483 AC-TG-TTCAA-G-TATGA-CTTATTTAAGAGA-GCAAAC
123 ACGAGAATCAATGCT-T-ACCTTATTTAAG-GATG--AAC
* ** ** ** * * * *
65517 TTTGATTCTAACAAAAACGGTTAAAAGAAAAGCTTTTCTTACGACACCAAACCATCAATGTCATG
1 TTTGATTTTAATGAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATG
** * * * * *
65582 TATCCTAATGAAAGG-AATGCATTTTTGGTACCCAATCTTGAAAAGAATTGAGATTGTTACGAGA
66 TATCCTAATG--AGGAAATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACTGTTACGAGA
*
65646 ATCAATGCTTACCTTATTTACGAGATGAAC
129 ATCAATGCTTACCTTATTTAAG-GATGAAC
* * * * * * ** * *
65676 TTTGATTTTAAGGAAAATAGGGCAAAGGAAA-CATTTCCATGCAAAATTAAATCATCGATATCAT
1 TTTGATTTTAATGAAAATAGTGCAAAGAAAAGC-TTTTCTTGCGAAACCAAAGCATCAATATCAT
* *
65740 TTATCCTAATGAGGAGAATGTGTTTATT-ATGCCTAATC
65 GTATCCTAATGAGGA-AATGTGTTT-TTGGTGCCTAATC
65778 ACAAAATGAA
Statistics
Matches: 3809, Mismatches: 1320, Indels: 723
0.65 0.23 0.12
Matches are distributed among these distances:
153 4 0.00
154 4 0.00
155 13 0.00
156 107 0.03
157 437 0.11
158 1309 0.34
159 1503 0.39
160 217 0.06
161 148 0.04
162 29 0.01
163 22 0.01
164 16 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (157 bp):
TTTGATTTTAATGAAAATAGTGCAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATG
TATCCTAATGAGGAAATGTGTTTTTGGTGCCTAATCTTGAAATGAATGGAGACTGTTACGAGAAT
CAATGCTTACCTTATTTAAGGATGAAC
Found at i:63105 original size:475 final size:475
Alignment explanation
Indices: 61254--102778 Score: 17073
Period size: 476 Copynumber: 86.1 Consensus size: 475
61244 TACATTTTAT
*
61254 AAAAATTGGTTGG-AAG-AAAGCCTTTCTTGCGACACCAAAGCATCAATGTCATGTAT-CTAATG
1 AAAAA-TGG-TGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATG
* *
61316 AAGGGAATAG-GTTTTTGGTACCCAATCTTGAAAATAATGGAGACTGTTATGAGAATCAATGCTT
64 AA-GGAAT-GTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTT
* * * *
61380 GCCTTATTTAAGGGGTGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTTCATGCATA
127 GCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAA
* * * * * *
61445 AGAAAATTATCAATATCATTTACCCTTATGAGGAGAATGGGTTTATAGCGCCTAATCACAAAATG
192 ATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * * *
61510 AAAGAAGTTAAATACTAGAATCCATGATTGTATCATTTGAGGCACGAACTTAGACTTTATAAAAA
257 AATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAA
** * * * **
61575 TTGGTGGGAAGAAAGCCTTTCTTATGAACCCAAAGCATCAATATCATGTATCCTTCTGAGAAGAC
322 TTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGAC
* * * *** * * * *
61640 TATGTTTATGTTACCTAATCCTGAAAAAAAGGGGGATTAATTTGAGTATTCATGTTTGTGTTATT
387 TATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATT
* *
61705 TAAGAGACAAACTTTGATTCTAAC
452 TAAGAGGCAAACTTTGATTCTATC
* *
61729 AAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * *
61794 GGAAATGTGTTTTTGGTACCCAATCTTGAAATGAATGGACACTGTTACGAGAATCAATGCTTACC
66 GG-AATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * *
61859 TTATTTAAAGGATGAACTTTGATTTTAATGAAAATAGTGCAAAGAAAACATTTTCATGCAAAATA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * * *
61924 AAATCATCAATATCATTTACCCTAGTGAGGGGAATGTGTTTATAGTGCCTAATCACAAAATTAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * *
61989 GAAGATCATTACTAGAATCCATGATTGTCTCATTTGAGGCACGGACTTAGACTTTATAAAACTTG
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTG
* * * * *
62054 GTGGGAAAAAAGCTTTTCTTGCGAAACCAAAGCGTCAATA-CGGTATATCCTTATGAGAAGACTA
325 GTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATC-GTCTATCCTAATGAGAAGACTA
* * * * * *
62118 TGTCTAGGGTGCCTAATCCTAAAAAGAA-TAGGGATTAATTTGAGTATTCATGTTTGTCTTATTT
389 TGTTTATGGTGCCTAATCCTGAAAAGAATTA-GGATTAGTATGACTATTCATGTTTGTCTTATTT
** *
62182 AAGAGATAAACTTTGATTCTAAC
453 AAGAGGCAAACTTTGATTCTATC
** * * * *
62205 AAAAACAGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAACGTCGTGTATCCAAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * *
62270 GGAAATGCGTGTTTGGTACCCAATCTT-AAAATGAATGGAGACTGTAATGAGAATCGATGC-TGG
66 GG-AATGTGTTTTTGGTACCCAATCTTGAAAA-GAATGGAGACTGTTACGAGAATCAATGCTTGC
* * *
62333 TTATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAA
129 CT-TATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAA
* * * * * *
62398 TAAAATCATCTATATCATATATCCTAATGAGGAAAATGTGTTTATTA-TGCCTTATCACAAACTA
193 TAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAATG
* * * * * * *
62462 AATGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCACGGACATACATTTTACAAAAC
257 AATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAA
* * * *
62527 TTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCATCAAAATCGTGC-ATCCTTATGAGAAAA
322 TTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGT-CTATCCTAATGAGAAGA
* * * ** * *
62591 CTATGTTTACGGTACCTAATCCTAAAAAGAACGAGGATTAGTATGACTTTTCATGTTTATCTTAT
386 CTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTAT
* * *
62656 TTTAGAGGCAAACTCTAATTCTATC
451 TTAAGAGGCAAACTTTGATTCTATC
* *** * *
62681 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAATGTCAACGTCATGTATCCTAATGTA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * ** * * *
62746 GGAAATGTGTTTTTGCTACCCAATCTTGATATGAATGGAGACTGTTGCGAGAATTGATACTGGTC
66 GG-AATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * ** *
62811 ATATTTATGGGATGAATTTTGATTTTAACTAAAATAGGGCAAAGAAAATATTTCCATGCAAAA-A
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* *
62875 AAATCATCAATATCATTTATCCTAATGCGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAGT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
*
62940 GAAGATCATTACTAGAATCCATGATTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTG
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTG
*
63005 GTGGGAAGAAAGCCTTTCTTGCGAAAGCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTAT
325 GTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTAT
* * * *
63070 GTTTATGGTGCCTCATCCTGAAAAGAATTAGGATTAGTGTGACTATTCTTATTTGTCTTATTTAA
390 GTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTAA
63135 GAGAGCAAACTTTGATTCTATC
455 GAG-GCAAACTTTGATTCTATC
* * * * * *
63157 AAAAATGGTGGAAAGAATAGCTTTGCTTACGACCCCAAA-AATCAATGTCATGTTTCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * *
63221 TGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGTCTATTACGAGAGTCAATGCTTACC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * **
63286 TTATATAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAGGATTTCCATGC-AAATG
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT-
* * * *
63350 AAAATCATCAATATCATTCATCCTAATAAGGAGAATGTGTTTACAATGCCTAATCACAAAATGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * *
63415 TGAAGATCATTACTAGAATCCATTTTTCTCTCTTTTGAGGCACGAACCTATG-C--TATACAAAA
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTA-GACTTTATA-AAAA
*
63477 TTGGTGGGAAGAAAGCCTTTCTTGCGAAAGCAAAGCATCAATATCGTCTATCCTAATGAGAAGAC
322 TTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGAC
* *
63542 TATGTTTATGGTGCCTCATCCTGAAAAGAATTAGGATTAGTGTGACTATTC-T-TATTGTCTTAT
387 TATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGT-TTGTCTTAT
63605 TTAAGAGAGCAAACTTTGATTCTATC
451 TTAAGAG-GCAAACTTTGATTCTATC
* * * * * *
63631 AAAAATGGT-GAAAGAATAGC-TTGCTTACGACCCCAAA-AATCAATGTCATGTTTCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * *
63693 TGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGTCTATTACGAGAGTCAATGCTTACC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * **
63758 TTATATAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAGGATTTCCATGC-AAATG
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT-
* * *
63822 AAAATCATCAATATCATTCATCCTAATGAGGAGAATGTGTTTACAATGCCTAATCACAAAATGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * *
63887 TGAAGATCATTACTAGAATCCATTTTTCTCTCTTTTGAGGCACGAACCTATG-C--TATACAAAA
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTA-GACTTTATA-AAAA
* * * *
63949 TTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATTAATATCATGTATCCTTATGAGAAGAC
322 TTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGAC
* *
64014 TATGTTTATGGTGCCTAATCCTGAAAAGAA-TAGGGATTAGTATGACTCTTTATGTTTGTCTTAT
387 TATGTTTATGGTGCCTAATCCTGAAAAGAATTA-GGATTAGTATGACTATTCATGTTTGTCTTAT
* * *
64078 TTAA-AGACAAACTCTGATTTTATC
451 TTAAGAGGCAAACTTTGATTCTATC
* * * *
64102 AAAAATGGTGGAAAAAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCCTATATCCTAAAGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * *
64167 GGGAATGTGTCTTTAGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATTAATGCTTGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* *
64232 TTATTTAAGGGATGAACTTTGATTTTTAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * *
64297 AAATCATTAATATCATTTATCCTAATGAGGAGAATGTGTTTCTTGTGCCTAATCACAAAATGAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * * * *
64362 GAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCATGAACTTACACTTAACAAAAATTG
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTG
* ** * * *
64427 GTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGTGTAAATATCGTGTATCCTTATGAGAAGACTAT
325 GTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTAT
* * ** * *
64492 GTTTATGGTGCCAAATCCTAAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTATTATGTAA
390 GTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTAA
* * * *
64557 GAGACAAACTTGGATACTAGC
455 GAGGCAAACTTTGATTCTATC
* * *
64578 AAAAACGGTTGAAAGAAAAGCTTTTCTTACGAC-CCAAAGCATCAATGTC-TGGTATCCTAATGA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT-GTATCCTAATGA
* * * * *
64641 AGAGAATGTGTTTTTGCTTCCCAATCTTGGAAAGAATGGAGACTATTGCGAGAATCAATGCTTGC
65 AG-GAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * * * *
64706 CTTTTTTAAGGGATGAACTTTGATTTCAAGGAAAATAAGGCAAAGGAAACCTTTCCATGCAAAAA
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* * * * * *
64771 AAAATCATCAATATCCTTTACCCTAATGAGGAGAATGTGTTTATAGTTCCTAATTAGAAAATTAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * * *
64836 AGAAGATAATTACTAGAATCCATGATTGTCACATTTTAGGCACAAACTTAGACTTTATAAAAATT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* * ** *
64901 GGTGGGAAAAAAGCTTTTCTTGCGAAAGTAAAGCATCAATATCGTCTATCCTAATGAGAAGACAA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* * **
64966 CGTTTATGGCGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTA
389 TGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTA
65031 AGAGGCAAACTTTGATTCTATC
454 AGAGGCAAACTTTGATTCTATC
** * *
65053 AAAAA-GGTGGAAAGAAAAGCTTTTCTTTTGACACCAAGGGATCAATGTCATGTATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * * * * * *
65117 TGGAATGTGTTCTTGGTTCTCATTCTTGAAAA-AATGGAGATTGTTATGAGAATCGATACTGGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * * *
65181 ATATTTAAGGGATAAATTTTGATTTTAAGAAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
65246 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * * * * * **
65311 GAAGATCATTACTAAAATCCTTGTTTGACACATTTGAGGCAAGAACTTATACTTTACGAAAATTG
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTG
**
65376 GTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAAATATCGTCTATCCTAACAAGAAGACTA
325 GTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATC-AATATCGTCTATCCTAATGAGAAGACTA
* * * * * * *
65441 TGTTTATGGTGCCTAATCTTGAAAA-AAATGGAGATTAGTATGACTGTTCAAGTATGACTTATTT
389 TGTTTATGGTGCCTAATCCTGAAAAGAATTAG-GATTAGTATGACTATTCATGTTTGTCTTATTT
*
65505 AAGAGAGCAAACTTTGATTCTAAC
453 AAGAG-GCAAACTTTGATTCTATC
* ** * *
65529 AAAAACGGTTAAAAGAAAAGCTTTTCTTACGACACCAAACCATCAATGTCATGTATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATG-A
** * * *
65594 AGGAATGCATTTTTGGTACCCAATCTTGAAAAGAATTGAGATTGTTACGAGAATCAATGCTTACC
65 AGGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * *
65659 TTATTTACGAGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATT
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
*
65724 AAATCATCGATATCATTTATCCTAATGAGGAGAATGTGTTTATTA-TGCCTAATCACAAAATGAA
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAATGAA
* * * * *
65788 TGAAGATCATTACTAGAATCCATGTTTGACTTATTTGAGGCATGAACTTACACTTTACAAAAATT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* * * * * *
65853 GGTGGGAAAAAAGCCTTTCTTGTGAAACCAATGCATCAATATCGTCTATCCCAACGTGAAGACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
** * * * * *
65918 CATTTAT-GTGGCCTAATCCTGAAAA-AAATAGGGATTAGTATGACTGTTAAAGTTTGACTTATT
389 TGTTTATGGT-GCCTAATCCTGAAAAGAATTA-GGATTAGTATGACTATTCATGTTTGTCTTATT
* **
65981 TAAGAGAGCAAATTTTGACTTC-AAG
452 TAAGAG-GCAAACTTTGA-TTCTATC
* * * * * * ** * * *
66006 GAAAATAGG-GCAAAGAAAAGATTTCCATGC-AAATAAAAATCATCAATATCATTTATCCTAATG
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGACA-CCAAAGCATCAATGTCATGTATCCTAATG
* * * *
66069 AGGAGAATG-G-----GG--------GTT----AG--T-AAGACTGTT-C-A-AGT--A----TG
64 AAG-GAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTG
* * ** * ** * * * *
66104 ACTTATTTAAGAGACAAACTTTGATTCT-ATCAAAA-ACGGTGGAAAGAAATGCTTTTCTTGCGA
128 CCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATA-GG-GCAAAGAAA-AC--AT-TT-CCA
* * ** * ** * * **** * *** * * *
66167 CGCCAAAGCTTCAATGTCATC-TTCCCTAATGAGGGGAATG-TG-TTCT-TGTTTCCTAAT-CTT
186 TG-CAAA--AT-AAAATCATCAATATC-ATTTATCCTAATGAGGAGAATGTGTTT-ATAGTGCCT
* ** * * * * ** * *
66227 GAA--AGAATAGGGACTGTTAGGAGAGTCGA-TGCT-G-GT-CATATTTAAGGGATAGATTTTAA
245 -AATCACAA-AATGAATG--A--AGA-TC-ATTACTAGAATCCATGTTT---GTCT-CA-TTTGA
* ***** * * ** *** * * * **
66286 GG-A--AA-ATAGGGAAAAGAAAAGCTTTCCATCCAAAAGAAAATCATCAATATCATTTATCCTA
297 GGCACGAACTTAGACTTTATAAAA--ATT-GGT-GGGAAG-AAAGC--C--TTTC--TT-GCGAA
** * * * * **
66347 ATGAAGAGAATATGCTTATAGT-GCCTCATCACAAAATGAATGAAGATCATAACTAGAATCCATG
350 ACCAA-AG--CAT-C-AATA-TCGTCT-ATC-C-TAATG-A-GAAGA-C-T-A-T-G--TTTATG
* * * * * * * * * ** * * * *** * *
66411 TTTGTCTCAT-TTGAGGAATGAACATA-CACTTTGCAAAAAT-TGGTGGGAAGAAAGCCTTACTT
397 -GTGCCTAATCCTGA--AAAGAA-TTAGGA-TTAGTATGACTAT--T--CATGTTTGTCTTATTT
* ** * *
66473 AGGAAACCAAAGCATCAATATGGTGCCTAATTC
453 AAG-AGGCAAA-C-T---T-TGAT-TCT-A-TC
* * ** ***** *** * *
66506 TGAAAAGAATGGGGGTTACTATGACTA-CTCTTGT-TTATTTTATTTAAG-A-CAAACTTTGATT
1 ---AAA-AATGGTGG--A--AAGAAAAGCT-TT-TCTTGCGACACCAAAGCATC-AA-TGTCA-T
* ** * * ** *
66567 CTATCAAAAATGGTTGAAAGAAAGCT-TTTCTTGCAACAACAAAGCATCAATGTCAGGTATCCTA
53 GTATC-CTAA----TGAAGGAATG-TGTTT-TTGGTAC--C-CA--ATC--T-T---G-A----A
* * * * * *** * * *
66631 AGGAA-GG-GAATGTATTCTTG-GTTCCCAATCGTGAAAAGATTG-GAAACTGTTATGAGAATCA
95 AAGAATGGAGACTGT-TAC--GAG-----AATC----AATGCTTGCCTTA-T-TTAAG-GGATGA
* * * *
66692 ATGTTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGAAAAGAAAAGATTTTCA
145 A-CTTTG--AT-TTT-A-------------------AGGAAAATAGGGCAAAGAAAACATTTCCA
* * * *
66757 TGCAAAAGAAATTCATCAATATCATTTATCCTAAGGAGGAGAATGTGTTTATAGTGCTTAATCAC
186 TGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC
* * *
66822 AAAATGAATG-AGATCATCACTAGAATCCATGTTTGTCTCCTTTGAGGCACGAACTTAGACTTAA
251 AAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
* * * *
66886 CAAAAATTAGTGGGAAGAAAGCCTTTCTTGCGAAACCAAA-CAACAATATCATCTATCCTAATGA
316 TAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGA
* * * ** * *
66950 GAAGACTCT-ATTACGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGA
381 GAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGT
* *
67014 CTTAGTTAAGAGAGCAAACTTCGATTCTATC
446 CTTATTTAAGAG-GCAAACTTTGATTCTATC
* * *
67045 AAAAACGGTGGAAAGAAAAGATTTTCTTCCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * ** * * * ** * *
67110 GGGAATCTGTTCTTGGTTCTTAATCTTGAAAATAATGGAGACTATTATGAGAATTGATGCTGGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * * *
67175 ATATTTAAGGGATGAATTTTGATTTTGAGGAAAATTGGGTAAAGAAAAGATTTCCATGCAAAA-A
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * * *** * *
67239 AAATTCATCAATATCATTTATCCTAACGAGAAGACTACATTTATGGGGCCTAATC-CTGAAAA-G
195 AAA-TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC--AAAATG
* ** * * * * * * *
67302 AGTGGGGATTAGTATGACT-G--TTCAAGTTTGACTTATTTAAAAGAGCA--AACTTTGA-TTCT
257 AATGAAGATCA-T-T-ACTAGAATCCATGTTTGTCTCATTT--GAG-GCACGAACTTAGACTT-T
* * * ** * * * * *
67361 ATCAAAAA-CGGTTGTAAGAAAAGTTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAA
315 AT-AAAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAA
* * * * * * * * * * *
67425 AGA-AAGGAATGTGTTCT-TGGTTCCCAATCTTGAAAAGAA-TAGAGACTATTACGA-GAATCGA
378 TGAGAA-GACTATGTT-TATGGTGCCTAATCCTGAAAAGAATTAG-GATTAGTATGACTATTC-A
* * * * * * ** * **
67486 GGCTTGCCATACTTAAGTGGTGAATTTTGACTT-TAAG
439 TGTTTGTCTTATTTAAGAGGCAAACTTTGA-TTCTATC
* * * * * * * ** * * * *
67523 GAAAATAGG-GTAAAGAAAGGATTTCCATGC-AAATGAAAATCATTAATATCATTTATCCTAATG
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGACA-CCAAAGCATCAATGTCATGTATCCTAATG
* * * * * ** * * *
67586 AGGAGAAGGTG-TTTAGAGTGCCTAATC-ACAAAATGAATGAAGATCATTAGTAGATGAGAATC-
64 AAG-GAATGTGTTTTTG-GTACCCAATCTTGAAAA-GAATGGAGA-C--T-GT-TACGAGAATCA
* * * * * * * * *
67648 AT-CAATAT-CGTCTATCCTAATGAGA-AAAGTATGTTTATGGTGCCTAATCTTGAAAAGAATTG
121 ATGC--T-TGCCT-TAT-TTAA-GGGATGAA--CT-TTGAT--T--TTAA----G-GAA-AATAG
* *** *** * ** * * * **
67710 GG-ATTAGTGTGACTATTCTTGTTTGTCTTATTTAAGAGAGCA--AACTTTGATTCTATCAAAAA
167 GGCA-AAG-AAAAC-A-T-TTCCATG-C-AAAATAA-A-ATCATCAA-TATCATT-TATC-CTAA
* * * * * * * *** * * *
67772 TGGTGGAAACAATAGCT-TTTCTTGCGACCCCAATGCATC--AATGTCATGTATCCTAATTAATG
220 T-GAGG--AGAAT-G-TGTTTATAGTG--CCTAAT-CA-CAAAATG-AATG-AAGATCATTACTA
* * * * * *
67834 GAAT--GTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAGCTTGTTACGAGAATCAATGCTTAT-
274 GAATCCATG-T-TT-G-TCTC-AT-TTG--AGGCA-CGAAC---TT---AG-A-C--T--TTATA
*** *** ** * ** *** ** * * * * * **
67896 CTTATTTAAGGGATTAATTTTGATTTTAAGGAAAATAAGGCAAAGAAAACAAT-TCCATGCAAAA
318 AAAATTGGTGGGAAGAA---AGCCTTTCTTG-CGA-AA-CCAAAG-CATCAATAT-CGT-CTATC
** * * * * ** * ** * *
67960 AAAATCATCAATA-TCATTTATCCTAATGAGGAGAATGTGTTTATTGTGTATAATCACAA-AAGG
374 CTAATGA-GAAGACT-ATGT-T--T-AT---G-G--TG-CCTAATCCTG-A-AA--AGAATTAGG
* * * * * * * *
68023 AATGAAGATCATAACTAGAATCCATGCTGGACTCATTT--GAGGCATGAACTTAGACTT-TA-C
422 -AT-TAG-T-ATGACT---ATTCATGTTTGTCTTATTTAAGAGGCA--AACTTTGA-TTCTATC
* * * * * *
68083 AAAAATTGGAGGGAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCCTAATGA
1 AAAAA-TGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * * * * * * * * * * * *
68147 GAAGACTATGTTTATGATGCCTAATCTTGAAAAGAATGGGGATTAG-TATGACTATTC-ATGTTT
65 -AGGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACT-GTTACGA-GAATCAATGCTT
** * ** * ** * ** * * *
68210 GTATTATTTAAGAGACAAACTTTGATTCT-ATCAAAGACAGTGG-AAAGAATGGC-TTTTCTTTC
127 GCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAA-ATAG-GGCAAAGAA-AACATTTCCATGC
* **** * * ** * * * * * * * *
68272 GATCCCAAAGCATCAATGTCACGTATCTTAAAGAAGAGAATATGTTTTTGGCT-CCCAATCTAGA
189 AAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAG-TGCCTAATC-ACA
* * * * * * * * * *
68336 AAA-GAATGGAGA-CTAATGCGAGAATCGC-TGCTTGTCAT-ATTTAAGGGATGAA-TTCTGATT
252 AAATGAATGAAGATC-ATTACTAGAATC-CATGTTTGTC-TCATTTGAGGCACGAACTT-AGACT
* ** * * ** * * * *
68396 TTA-AGGAAAATAGG-GCAAAGAAAAG-ATTTCCATGCGAAAGAAAATCAACAATATCATTTATC
313 TTATA--AAAATTGGTGGGAAG-AAAGCCTTT-CTTGCGAAACCAAAGCATCAATATCGTCTATC
* * * * * ** * * * *
68458 CTACTGAGGAGAATGTGCTTATATTGCCTAAACAC--AAAATGAATGAAGA-TCGT-T-ACTAGA
374 CTAATGAGAAGACTATGTTTATGGTGCCTAATC-CTGAAAA-GAATTAGGATTAGTATGACT---
* * * * * *
68518 ATCCATGTTGGTCTCATTT--GAGGCATGGACTTAGACAT-TAT-
434 ATTCATGTTTGTCTTATTTAAGAGGCA--AACTTTGA-TTCTATC
* * * * *
68559 AAAAATTGGT-GAGAAG-AAAGCCTTTT-TTGTGAAACCAAAGCGTCAATATCGTGTATCCTTAA
1 AAAAA-TGGTGGA-AAGAAAAG-CTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCC-TAA
* * * * * * * * * * * * * *
68621 -GAGAAGACTATGTTTATGGTGCCTAATCCTGATAAGAATGGGGATTAG-CATGACTATTC-ATG
62 TGA-AGGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACT-GTTACGA-GAATCAATG
* * * * * * * ** ** * *
68683 TTTGTCTTATTAAAGAGATAAATTTTGATTCT-ATTAAATACTATTG-AAAGAAAAGC-TTTTCT
124 CTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAA-A-TAGGGCAAAGAAAA-CATTTCCA
** **** * * * * * * *
68745 TGTGACGCCAAAGCATCAATGTCATTTATCCTAATGAAGG-GATTGTGTTTTTGGTTCCTAGTCA
186 TGCAAAATAAAATCATCAATATCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATCA
* * ** * * * * * * * * * *
68809 TGAAAA-GAATGGAGATTGTTA-TGAGAATCAATGCTTGCCTTATTTAAGGGATGGACTTTGATT
250 -CAAAATGAATGAAGATCATTACT-AGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACT
* ** * * * ** * * * *
68872 TTATGAAAAATAGG-GCAAAGGAAA-CATTTTCATGCAAAAGAAAATCATCAATATCATTTACCC
313 TTAT-AAAAATTGGTGGGAA-GAAAGC-CTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCC
* * * * * * * * *
68935 TAATGAGGAGAATGTGTTTATAGTGCCTAGTCAC--AAAATGAATGAAGATCATTACTAGA--AT
375 TAATGAGAAGACTATGTTTATGGTGCCTAATC-CTGAAAA-GAATTAGGATTAGTA-T-GACTAT
* * * * * ** * **
68996 CCGTGTTTGTCCCT-TTTGACACACGAACTTACACTT-TA-C
436 TCATGTTTGT-CTTATTTAAGAGGCAAACTTTGA-TTCTATC
* * * * * * * *
69035 AAAAATTTGAGGGAAG-AAAGCCTTTCTTGCTAAACCAAAGCATCAATATCATCTATCCTAATGA
1 AAAAA-TGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * * ** * * * * * * ** * * * *
69099 GAAGACTATGTTTACGGTGCCTAATCCTGATAAGAATGGGGATTAATATGACTATTC-ATGTTTG
65 -AGGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGA-GAATCAATGCTTG
* * * * * * ** * * * *
69163 TCTTATTAAAGAGATAAATTTTGATTCT-A-TCAAATACTGTTG-AAAGAAAAGC-TTTTCTTAC
128 CCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATA--G-GGCAAAGAAAA-CATTTCCATGC
* ** * * * ** * ** * * * * * *
69224 GAAACCAAAGCATCAATGTCATTTATCCTAACGAATAGATTGCATTTTTGGTTCCCAGTCATGAA
189 AAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCA-CAA
* * * * ** * * * * * *
69289 AA-GAATGGAGATTATTACGAGAATCAATACTTGCCTTATTTAAGGGATGAACTTTGA-TTTGAT
253 AATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTT-AT
* * ** * * * ** * * * *
69352 GGAAAATAGG-GCAAAGGAAA-CATTTCCATGCAAAAGAAAATCATCAATATCATTTACCCTAAT
317 -AAAAATTGGTGGGAA-GAAAGCCTTT-CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAAT
* * * * * * * * *
69415 GAGAAGAATGTATTTATAGTGCCTAATCAC--AAAATGAATGAAGATCATTACTAGA--ATCCAT
379 GAGAAGACTATGTTTATGGTGCCTAATC-CTGAAAA-GAATTAGGATTAGTA-T-GACTATTCAT
* *** * ** *
69476 GTTTCTCCCCTTT--GATGCACGAACTTACATTTTA-C
440 GTTTGTCTTATTTAAGAGGCA--AACTTTGATTCTATC
* * * * * * * * ** *
69511 AAAAAATGTTGGGAA-TAAAGCCTTTCTTGTGAAACCAAAGCATCCATATTGTCTATCCTAATGA
1 -AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * ** * * * * * ** * * * *
69575 GAAGACTAG-GTTTACGGTGCCTAATCCTGAAAAGAATGGGGATTACTATGACTATTC-ATGTTT
65 -AGGAAT-GTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGA-GAATCAATGCTT
* * * * ** * * * * * *
69638 GACTTAGTTAAGAGA-GCAAACTTTGATTCT-ATCAACAA-CGGTGAAAAGAAAAGATTTTCTTT
127 GCCTTATTTAAGGGATG--AACTTTGATTTTAAGGAA-AATAGG-GCAAAGAAAACATTTCCATG
** * ** * * * * *
69700 TGACACCAAAGCATCAATGTCATGTATCCTAATGAAGG-GAATGTGTTCT-TGGT-TCTCAATCT
188 CAAAATAAAATCATCAATATCATTTATCCTAATG-AGGAGAATGTGTT-TATAGTGCCT-AATC-
** * * * * * * * * * *
69762 TGAAAAT-AATGGAGA-CAGTTA-TGAGAATCGATGCTGGT-T-ATATTTATGGGATGCATTTTG
249 ACAAAATGAATGAAGATCA-TTACT-AGAATCCATGTTTGTCTCAT-TTGA-GGCACGAACTTAG
* * ** * * ** * *
69822 A-TTTCA-AGGAAACTAGG-GCAAAGAAAAG-ATTTCCATGC-AAAAGAAATTCATCAATATCAT
310 ACTTT-ATA--AAAATTGGTGGGAAG-AAAGCCTTT-CTTGCGAAACCAAA-GCATCAATATCGT
* * **
69882 TTATCCTAATGAGAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACT
369 CTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACT
* * *
69947 ATTCAAGTTTGACTT-TTTGAAGAGAGCAAACTTTGACTCTATC
434 ATTCATGTTTGTCTTATTT-AAGAG-GCAAACTTTGATTCTATC
* * *
69990 AAAAATGGTGGTAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTTTCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * * * * *
70055 GGAAATGTGTTCTTGGTTCCTAATCATGAAAAGAATGGAGACTATTATGAGAATCGAGGCTTGTC
66 GG-AATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * * *
70120 ATATTT-AGTGATGAATTTTGATTTTGAGGAAAATAGGGCAAAGGAAACATTTCTATGCAAAATA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * * * *
70184 AAATCATCTATATTATTTATCCTAATGAAGACAATGTGTTTATTGTGCCTAATCACAAAATGAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * * * * * *
70249 GAAGATCAGTACTAGAATCCATGTATGACTCATTTGAGGTACGACCTTATACTTTACAAAAATTG
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTG
* * * *
70314 GAGGGAAGAAAGCCTTTCTTGCTAAACCAAAGCATCACTATCATCTATCCTAATGAGAAGACTAT
325 GTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTAT
* * ** *
70379 GTTTGTGGTGCCTAATCTTGAAAAGAATGGGGATTAGTAGGACTATTCATGTTTGTCTTATTTAA
390 GTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTAA
* ** * *
70444 AAGATAAGCTTTGATTCTAAC
455 GAGGCAAACTTTGATTCTATC
* * *
70465 AAAAATGGTTGAAAGAAAAGCTTTTCTTCCGACACCAAAGCATCAATGTCATGTATCCTATTGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * *
70530 GGGAATATGTTTTTGGTTCCCAATCTTGAAAGGAATGGAGACTGTTACAAGAATCGATGCTTGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * *
70595 ATATTTAAGGGAAGAA-TCTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
130 TTATTTAAGGGATGAACT-TTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* * * * *
70659 AAAATCATCAATATCATTTATCCTAACGAAGAGAATGTGTTTATTGTGTCC-AATTACAAAAGGA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG-CCTAATCACAAAATGA
* * * * *
70723 ATGAAGATCATTACTAGAATCCATGTTGGACTCATTTGAGGTACGAACTTATACTTTACAAAAAT
258 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAAT
** *
70788 TGGAAGGAAGAAAGCCTTTCTTGCTAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* * ** *
70853 ATATTTATAGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGGCTATTCATGTTTGTCTTATTT
388 ATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
* * * *
70918 AAAAGACAAACTTTGATTTTAAC
453 AAGAGGCAAACTTTGATTCTATC
* * * *
70941 AAAAAAGGTTGAAAGAAAAGCTTTTCTTGCGAGACCAAAGCATCAATGTCATGTATCCTATTGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * *
71006 GGGAATGTGTTTTTGGTTCCAAATCTTGAAAGGAATGGAGACTGTTACGAGAACCAAAGCTTGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * * ** * *
71071 ATATTTAAGGGATGAATTTTGATTTTAAGGAAATTCGGGCAAAGAAAAGATTTCCATGTGACAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * * *
71136 AAGTCATCAATATCATTTATCCGAATGAGGAAAATGTGTTTATAGTGCCTAATCATAAAAT-ATA
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA-A
* ** * * *
71200 TGAACATTGTTACTTGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGACTTTACAAAAATT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* * * * *
71265 GGTGGGAAGAAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATTTATCCTTATGAGAAGACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* * ** * *
71330 AGTTTATGATGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGCCTTATTAA
389 TGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTA
* *
71395 AGAGACAAACTTTCATTCTATC
454 AGAGGCAAACTTTGATTCTATC
* * * * *
71417 AAAAATAGTAGAAAGAAAAGCTTTTCTTGCAACACCAAAGCATCAATGTCATGTATTCTATTGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * *
71482 GAGAATGTGTTTTTGG-ATCCCAATCTGGAAAAGAATGGAGACTGATACGAGAATCGATGCTTGT
66 G-GAATGTGTTTTTGGTA-CCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * * * * *
71546 CATATTCAAGGGATGAATTTTGATTTTAAGGAAAATA-GGCAAAGAAAAGATTTTCATGCGAAAG
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* **
71610 AAAATCAACAATATCATTTATCCTGCTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * * * *
71675 TAAAGATCATTACTAGAATCCATGTTTGTCCCCTTTGATGCACGAACTTACACTTTACAAAAAAT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* * * * * * *
71740 GGTGGGAATAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCATGTATCCTTATGCGAATACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* * ** * * *
71805 AGTTTTTGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATATTTGCCTTATTAA
389 TGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTA
*
71870 AGAGACAAACTTTGATTCTATC
454 AGAGGCAAACTTTGATTCTATC
* * * *
71892 AAAAACGGCT-GAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCCTGTATCCTACTGA
1 AAAAATGG-TGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* ** * * *
71956 AGGGAAGGTGTTTTTGGTTTCCAATCTTGAAAGGAATGGAGACTGTTACGAGAATCGATGCTTGT
65 A-GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * * * * *
72021 CATATCTAAAGGATGAA-TCTTGATTTTAACGAAAATAGGGCAAATAAAAGATTTCTATGCAAAA
129 CTTATTTAAGGGATGAACT-TTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAA
* * * ** *
72085 GAAAATCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATTGTGTATAATCACAAAAGGA
193 TAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * * * * *
72150 ATGAAGATCATAACTAGAATCCATGCTGGACTTATTTGAGGCACGAACTTAGACTTTACAAAAAT
258 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAAT
* * * *
72215 TGGAGGGAAGAAAGCCTTTCTTGCGAAATCAAAGCATCAATATCATCTATCCTAATGAGAAAACT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* * ** *
72280 ATGTTGATGATGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTTATGTTTGTCTTATTT
388 ATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
*
72345 AAGAGACAAACTTTGATTCTATC
453 AAGAGGCAAACTTTGATTCTATC
*** ** * * * *
72368 AAAAGCAGTGGAAAGAATTGCTTTTCTTCCGATC-CCAATGCATCAATGTCACGTATCCTAAAGA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGA-CACCAAAGCATCAATGTCATGTATCCTAATGA
** * * * *
72432 AGAGAATAAG-TTTTGGTTCCTAATATTGAAAAGAATGGAGATTGTTACGAGAATCAATGCTTGC
65 AG-GAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* *
72496 CTTATTTAAGGGATGAACATTGATTTTAAGGAAAATA-GGCAAAGGAAACATTTCCATGCAAAAT
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* *
72560 AAAATTATCAATATCATTTATCCTAATGAGCAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* ** * *
72625 TGAAGGTCATTACTAGAATCCATGTTTGTCTTTTTTGAGGCACGAACTTAGACATTATAAAACTT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* * * * * ** *** * * *
72690 GGTGGGAAGAAAGCCTTTCTTGTGAAACCAAATCCTGAA-A-AGAATA-GGGAATAATATGACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* * * * * * * ** ** * * ***
72752 --TTCATGTTTGTCTTAT-TTAAGAGACAA-ACTT-TGACTCTA-TCAAAAACGGTTGAAAGAAA
389 TGTTTATG-GTGCCTAATCCT--GA-A-AAGAATTAGGA-T-TAGT--ATGACTATT-CATGTTT
* ** ** * **
72811 G-CTTTTCTTGCGACACCAAAGTATCAATGTCAGGTATCC
444 GTCTTAT-TTAAGA-GGCAAACT-TTGAT-TC---TAT-C
* *** * * **** * * *
72850 TAAAGAA--G-GGAATGTATTCTTGGTTCCTAATCTTGAAAAGATTGGAAACTGTTATGAGA-AT
1 -AAA-AATGGTGGAAAG-A--AAAGCTT--T--TCTTG---CGACACCAAA--G-CATCA-ATGT
* * * * * * *** * **
72911 CGATGTCTCTCATATTTAAGTGATGAATTTTGATTTTAAGG-A--AAATAGGGCAAAGAAAAGAG
50 C-ATGTATC-C-TAATGAA--G--GAA-TGTG-TTTT-TGGTACCCAATCTTGAAAAGAATGGAG
* ** * * * * *
72973 TTCCATGCAAAAGAAAATC-AT-CAAAAT-CATT-TCTCCTAATGAGGA-GAA-TGTG--TTTAT
105 --AC-TG-TTACGAGAATCAATGC---TTGCCTTAT-T--TAA-G-GGATGAACTTTGATTTTA-
** *** * ** * *** **** * * *
73030 AGTGCCTAATCACAACATGAAAGAAGATCATTACTAGAATCCATGTTTGTCTCCTTTGGAACATA
157 AG-G-AAAAT-AGGGC---AAAGAA-AACATT--T-CCATGCAAAATAAAAT-C-AT-CAATAT-
* ** * * ** * * * * * *
73095 GACTTT-TCAAAAATTAGTGGGAAGAAAGCCTTTCT--TG-CGAA--AC-CAATGCATCAATATC
208 CA-TTTATC-CTAA-T-G-AGG-AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA--
* * * * * ** * *
73153 GTCTATCCTAATGAGAAGACTATGTTATGGTGC-CTAATTCAGAAAAGAATGGTGATTAGTA-TG
265 -TC-AT--TACT-AGAA-TCCATGTT-T-GT-CTC-ATTTGAGGCACGAA-----CTTAG-ACT-
* * ** * *** ** * * * ** * * *
73216 GCTATTAATGTTTGTCTTATTTAACAGACAAACTTTGATT-C-TAACAAAAACGGTTGAAAGAAA
313 -TTATAAAAATTGGTGGGA-AGAA-AG-C---CTTT-CTTGCGAAAC-CAAA-GCAT-CAA-TAT
* * * * ** * * * * * *
73279 AGCTTTATTTGCGACACCA-AAGCATCAATG-TCAT-CTATCCTAA--C-GAGAAGACATT--GT
366 CG-TCTA--TCCTA-ATGAGAAG-A-CTATGTTTATGGT-GCCTAATCCTGAAAAGA-ATTAGGA
* * * *** *** * * * *
73336 TTA-TGATGCCTAATCCTGAAAAGAATGGGGA-TT-AGTATG---ACTATTTATGTTTGTC
423 TTAGT-ATGACTATTCATG-TTTG--T-CTTATTTAAG-AGGCAAACT-TTGAT-TCTATC
** * ** * * * * *
73391 --CTAT--T-TAAGAGACAAA-CTTTGATT-CTATCA--AAAGCAGTGGAAAG-AATAGCCTTTC
1 AAAAATGGTGGAA-AGA-AAAGCTTTTCTTGCGA-CACCAAAGCA-T-CAATGTCAT-G--TATC
* * * *** * *** * **** ** ** * *
73446 CTTCGATCCCAA-GCATCAATGTCACGTATCCTAAAAAAGAGAATAAGTTTTTGGTTCCCAATCT
58 C-T-AAT--GAAGGAATGTGTTTTTGGTA-CC--CAATCTTGAA-AAG--AATGG---AGACTGT
** * * ** ***** * *** *
73510 TGAAAAGAATGGAGATTGTTATGAGAATTAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTT
110 T-ACGAGAAT-CA-A-TGCT-T--GCCTT-AT--TTAAGGGA-TGAA-CTTTG-A---T--TTTA
* * * * * * *
73575 AAGGAAA-ATAGGCAAAGGAAGCATTTCCTTGCAAAATAAAATTATCAATATCATTTATCCTAAT
157 AGGAAAATA-GGGCAAAGAAAACATTTCCATGCAAAATAAAATCATCAATATCATTTATCCTAAT
* * * * *
73639 GCGGAGAATGTGTTTATAGTGCTTAATCATAAAATGAAAGAAGGTCATTACTAGAATCCATGTTT
221 GAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * * *
73704 GTCTCCTTCGAGGCACAAACTTAGACTTT-TCAAAAATTGGTGGGAAGAAAGACTTTCTTGCGAA
286 GTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAA
* *
73768 ATCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAG
350 ACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAG
** * * *
73833 AATGGGGCTTAGTATGACTATTCATGTTTGTCTTATTTAAG-GGATAAACTTTGATTCTAAC
415 AATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGG-CAAACTTTGATTCTATC
* * *
73894 AAAAATGGTTGAAAGAAAAGCTTTTTTTTGCGACACCAAAGCATCAATGTCATGTATCCTAAAGA
1 AAAAATGGTGGAAAGAAAAGC-TTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * * * * * **
73959 AGGGAATGTGTTTTTGATTCCCATTCTTGAAAGGAATGGAAACTGTTATGAGAATCAATGCTTAT
65 A-GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * * * * * * *
74024 CATATTTTAGGGATGAATTTTGATTTGAAGGAAAATAGGGCAAAGAAAAGATTTTCGTGAAAAAG
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* * *
74089 AAAATCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATTGTGCCGAATCACAAAATGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * * *
74154 AGAAGATCATTACTATAATCAATGTTTGTCTCCTTTGAGGCACGTACTTAGACTTTTTAAAAATT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* * * *
74219 GGTGGGAATAATGCCTTTCTTGCGAAACCAAAGCATCACTATCATCTATCCTAATGAGAAGACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* * *
74284 TGTTTATGGTGCCTAATCCTAAAAAAGAA-TGGGATTAGTTTGACTATTCATGTTTGTCTTATTT
389 TGTTTATGGTGCCTAATCCT-GAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
74348 AAGAGAG-AAACTTTGATTCTAAT-
453 AAGAG-GCAAACTTTGATTCT-ATC
* * *
74371 AAAAACGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCTTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * * ** *
74436 GGGAATATGTTTTTGGTTCCCAATCTTGAAAGGAATGCAAACTGTTATGAGAATTGATGCTTGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * * * * *
74501 ATATTTAACGGATAAATTTTGATTTTAAGGAAAATAGAGCAAAGAAAAGATTTCCTTGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * *
74566 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGTCTAATCACAAAAGGAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * ** * *
74631 GAAGATCTTTACTAGAGTCCATGTTCATCTCATTTGAGGCATGAACTTAGACTTTACAAAAATTG
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTG
* * * * * * * * *
74696 GTAGGAAGATAGCCTTTCTTGCAAAACCCGAAGCGTCAATATCATGTATCCTTATGCGAAGACTA
325 GTGGGAAGAAAGCCTTTCTTGCGAAA-CCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* * * ** * *
74761 AGTTTATGGTGCCTAATCCAGAAAGGAATGGGGATTAGTATGACTATTCATGTTTGCCTTATTAA
389 TGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTA
*
74826 AGAGACAAACTTTGATTCTATC
454 AGAGGCAAACTTTGATTCTATC
* * * *
74848 AAAAATGGTTGAAGGAAAAGCTTTTCTTGCAACACCAAAGCATCAATGTCATGTATCCTAATAAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * * *
74913 GGCAATGTGTTTTTGGTTCCCATTCTGGAAAGGAATGGAGACCGTTACGAGAATCGATGCTTGTC
66 GG-AATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * *
74978 ATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCGATGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* *
75043 AAATCGTCAATATCATTTATCCTAATGAGGAGAATGTCTTTATAGTGCCTAATCACAAAATGAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * * * *
75108 AAAGATCATTACTAGAATCCATGGTTGTCTCCTTCGAAGCACGAACTTAGACTTT-TCAAAAATT
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAATT
* *
75172 GGTGGGAATAAAGCCTTTCTTGCGAAACGAAAGCATCAATATCGTCTATCCTAATGAGAAAAGAC
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAG--AAGAC
* ** ** *
75237 TATGTTTATGGTGCCTAATCCAGAAAAGAATGGGGATTAGTACAACTATTCATGTTTGCCTTATT
387 TATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATT
* *
75302 AAAGAGACAAACTTTGATTCTATC
452 TAAGAGGCAAACTTTGATTCTATC
* * * * * *
75326 AAAAATGGTTGAAGGAAAAGCATTTCTTGTGACACCAAAGCATCAATGTCATATATCCTAATAAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
** * * ** * * *
75391 GAGAATGTAATTTTGGTTCCCAATCTTGAAAGGAATGGAGACCATTATGAGAATCGATGCTTGTC
66 G-GAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * ** * * *
75456 ATATTTAAGGGATTAA-TCTTGATACTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCAAAAA
130 TTATTTAAGGGATGAACT-TTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* * *
75520 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGTCTAATCACAAAAGGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * * * *
75585 TGAAGAT-ATTTACTAGAATCTATGCTTGTGTAATTTGAGGCATGAACATAGACTTTACAAAAAT
259 TGAAGATCA-TTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAAT
* * * * * * * ** *
75649 TGGTAGGAAGATAGCCTTTCTTGCGAAACTCGAAGCGTCATTATCATGTATCCTTCTGCGAAGAC
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAAC-CAAAGCATCAATATCGTCTATCCTAATGAGAAGAC
* * * *
75714 TAAGTTTATGGTGCCTAATCCAGAAAAGAA-TAGGGATTAGTATGACTATTAATGTTTGCCTTAT
387 TATGTTTATGGTGCCTAATCCTGAAAAGAATTA-GGATTAGTATGACTATTCATGTTTGTCTTAT
* *
75778 TAAAGAGACAAACTTTGATTCTATC
451 TTAAGAGGCAAACTTTGATTCTATC
** * * * *
75803 AAAAACAGTTG-AAGTAAAAGCTTTTCTAGTGTCACCAAAGCATCAATGTCATGTATCCTAATGA
1 AAAAATGGTGGAAAG-AAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * * * *
75867 AGGGAATGCTGTTTTTGGTTCCCAATCTAGAAAGGAATGGAGACCGTTACGAGAATCGATGCTTG
65 A-GGAATG-TGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTG
* * * * *
75932 TCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAATGAAAAGATTTCCATGCAAAA
128 CCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAA
* * *
75997 GAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTCTTTATAGTGCCTAATCACAAAATAA
193 TAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * * * *
76062 ATAAAGATCATCACTAGAATCCATGTTTGTCTCCTTCGAGGCATGAACTTAGACTTT-TCAAAAA
258 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAA
* *
76126 TTGGTGGGAAGAAAGCCTTTCTTGCGAAACGAAAGCATCAATATCATCTATCCTAATGAGAAAAG
322 TTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAG--AAG
* ** *
76191 ACTATGTTTATGGTGCCTAATCCAGAAAAGAATGGGGATTAGTATAACTATTCATGTTTG-CATT
385 ACTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTC-TT
*
76255 ATTAAAGAGGCAAACTTTGATTCTATC
449 ATTTAAGAGGCAAACTTTGATTCTATC
* * * * *
76282 AAAAACGGTTGAAGGAAAAGCATTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * ** * * *
76347 GAGAATGTGTTTTTGGTTCCCAATCTTGAAAGGAATGGAGACCATTATGAGAATCGATGCTTGTC
66 G-GAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * ** * *
76412 ATATTTAACTGGATGAA-TCTTGATACTAAGGAAAATAGGGCAAAGAAAATATTTTCATGCAAAA
130 TTATTTAA-GGGATGAACT-TTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAA
* * * * * * * *
76476 AAAAATCATCAACATCATTTATCCTGATGAGGAGAATGTATTTATTGTGTCTAATCACAAAAGGG
193 TAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * * * * * * *
76541 ATGAAGAT-ATTTACTAGAATCTATGCTTGTCTAATTTAAGGCATGAACATAAACTTTACAAAAA
258 ATGAAGATCA-TTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAA
* * * ** * * * *
76605 TTGGTAGGAAGATAGCCTTTCTTGCGAAACCTGAAGTGTCAATATCATGTATCCTTATGCGAAGA
322 TTGGTGGGAAGAAAGCCTTTCTTGCGAAACC-AAAGCATCAATATCGTCTATCCTAATGAGAAGA
* * ** *
76670 CTAAGTTTATGGTGCCTAATCCAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGCCTTAT
386 CTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTAT
* *
76735 TAAAGAGACAAACTTTGATTCTATC
451 TTAAGAGGCAAACTTTGATTCTATC
** * *
76760 AAAAACAGT----TG--AAGCTTTTCTTGAGACACCAAAGCATCAATGTCATGTATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * * *
76819 GGGAA----TTTTTGGTTCCCAATCTGGAAAGGAATGGAGACCGTTATGAGAATCGATGCTTGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * *
76880 ATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAAAAAAGATTTCGATGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGC-----A
* *
76945 AAATCGTCAATATCGAAAATAGTCAATATCATTTATCCTAATGAGGAGAATGTCTTTATAGTGCC
190 AAA---T-AAAATC------A-TCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCC
* * *
77010 TAATCACAAAATGAATAAAGATCATTACTAGAATCCATGTTTGTCTCCTTCGAGGCACGAACTTA
244 TAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTA
* * * * * *
77075 GACTTT-TCAAAAATTGGTAGGAAGAAAGCTTTTTTTACGAAACGAATGCATCAATATCGTCTAT
309 GACTTTAT-AAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTAT
* * ** * ** *
77139 CCTAATGGGAAAAGACTATGTTTATGGTGCCTTAT-CTAGAAAAGAATGGGGATTGGTACAAATA
373 CCTAAT--GAGAAGACTATGTTTATGGTGCCTAATCCT-GAAAAGAATTAGGATTAGTATGACTA
* * *
77203 TTCATGTTTGCCTTA-TTAAGAGGCTAACCTTT-ATTTTATC
435 TTCATGTTTGTCTTATTTAAGAGGC-AAACTTTGATTCTATC
* * * * * *
77243 AAAAACGGTTGAAGGAAAAGCATTTCTTG-TACACCAAAGCATCAATGTTATGTATCCTAATG-A
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * ** * ** * *
77306 GGAAAATGTGTTTTTTGTTCCCAATCTTGAAAGGAATGGAGACCATTATGAGAATCGGTGCATGT
66 GG--AATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * * * *
77371 CATATTTAAGGGATGAA-TCCTGATTTTTAGGAAAATAGGGCTAAGAAAAGATTTTCATGCAAAA
129 CTTATTTAAGGGATGAACT-TTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAA
* * * *
77435 GAAAATCATCAATATCGTTTATCCTAATGAGGAGAATGTGTTTATTGTGTCTAATCAC-AAATGG
193 TAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT-G
* * *
77499 AATGAAGTTCTTTACTAGAA-CCATGTTTGTCTCATTTGAGGCACGAACTTAGA-TTTCACAAAA
257 AATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTT-ATAAAA
* ** * * * *
77562 ATTTGAAGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATACCATATATCCTTACAT--GAA
321 ATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCC-TA-ATGAGAA
* * ** * * *
77625 GACTAAGTTTATGGTGCCTAATCCTGAAACGAATGGGGATTGGTATGACTATTTATGTTTGCCTT
384 GACTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTT
** *
77690 -TTTAAAGAGATAAATTTTGATTCTATC
449 ATTT-AAGAGGCAAACTTTGATTCTATC
* * * *
77717 AAAAATGGCGGAAAGAAAAACTTTTCCTGCGACACCAAAGCATCAATGTCATGCATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * * * **
77782 TGGAATGTCTTCTTAGTTCCCAATCTTGAAAAGAATGGAAACTGTTATGAGAATCAATGTTTGTA
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
** * * ** * *
77847 AAATTTAAGGGATGAA-TTCTGATTTTAAGGAAAACAGGGCAAAGGAAAGGTTTTCATGCAAAAG
130 TTATTTAAGGGATGAACTT-TGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* * *
77911 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATCGTACCTAATCACAAAAGGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * *
77976 TGAAGATCATTACTAGAATCCATGTTGGACTCATTTAAGGCACGAACTTAG---TTACAAAAATT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* *
78038 GGTGGGGAA-AAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACG
324 GGT-GGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* * * ** *
78102 ATGTTTATAGTGCTTAATCCTAAAAAGAATGGGGATTAGTATGACTTTTCATGTTTGTCTTATTT
388 ATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
*
78167 AAGAGACAAACTTTGATTCTATC
453 AAGAGGCAAACTTTGATTCTATC
* * *
78190 -AAAATGGGTGGAAAGAATAGCTTTTCTTGCGATC-CCAAAGCATCAATGCCACGTATCCTAATG
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGA-CACCAAAGCATCAATGTCATGTATCCTAATG
* * * * *
78253 AAGGGAATATGTTTTTTGTTCCCAATCTTGAAAAGAATGGAGACTGTTATGAGAATTAATGCTTG
64 AA-GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTG
* * * *
78318 CCTTACTTAAGAGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAA
128 CCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAA
* *
78383 TAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGCTTT-TAGTGCCTAATCATAAAATG
193 TAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTG-TTTATAGTGCCTAATCACAAAATG
* * * * * * *
78447 AATGAAGATCATTATTAGAATCTATGTTTGACTCATTTGATGCACCG-GCTTAGACTTCACAAAA
257 AATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCA-CGAACTTAGACTTTATAAAA
* * *
78511 ATTGGTGGG--G--A---------G-AAAACCAAAGCGTCAATAGCGTCTATCCTAATGAGAAGA
321 ATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGA
* * ** * * *** * *
78562 CTACGATTATGGTTTCTAATTCGGAAAAGAAAGGGGATTTGTATGACTATTCAAGTTTGTCTTAT
386 CTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTAT
*
78627 TTAAGAGAGCAAACATTGATTCTATC
451 TTAAGAG-GCAAACTTTGATTCTATC
* *
78653 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCCTGCATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * ** * * * **
78718 TGGAATGTGATTTTGGTTCCCAATCTTGAAAGGAATGGAGACAATTATGAGAATCGATTCTTATC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * *
78783 ATATTTAAGGGATGAATTTTGATTTTAACGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * *
78848 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCATAAAATGAAA
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* *
78913 GAAGATCATTACTAGAATCTATGTTTGT-TGCCTTTGAGGCACGAACTTAGACTTT-TCAAAAAT
260 GAAGATCATTACTAGAATCCATGTTTGTCT-CATTTGAGGCACGAACTTAGACTTTAT-AAAAAT
* * *
78976 AGGTGGGAAGAATGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGAGT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* * ** *
79041 ATGTTGATGGTGCCTAATCCTGAAAGGAATGGGGATTAGTATGACTATTTATGTTTGTCTTATTT
388 ATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
*
79106 AAGAGAG-AAACTTTGATTCTAAC
453 AAGAG-GCAAACTTTGATTCTATC
* * * * * *
79129 AAAAACGGTTGAAAGAAAAGCATTTCTTGTGGCACCAAAGCATCAATGTCATGTATCCTATTGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * ** * * **
79194 GGAAAT-T-TTTTTGGGT-CCCAATCTTGAAAGGAATGGAGACTGTTATGAGAATTGACGTTTAT
66 GG-AATGTGTTTTT-GGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * *
79256 CATATTTAAGGGATGAA-TCCTGATTTTTAAGGAAAATAGGGCAAAGAAAATATTTTCATGCAAA
129 CTTATTTAAGGGATGAACT-TTGA-TTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAA
* * * * *
79320 AGAAAATCATCAATATCATTTATCCTAATGAGGGGAATGTGTTTATTGTGTCTAATCACAAAAGG
192 ATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * ** *
79385 AATGAAGAT-ATTTCCTAAAATCCATGTTTGTCTAATTTGAGGCATTAACTTAGACTTTACAAAA
257 AATGAAGATCA-TTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAA
* * * * * * * * *
79449 ATTAGTAGGAAAAAAGCCTTTCTTGTGAAACCAAAGCGTCAATATCATGTATCCTTATGTGAAGA
321 ATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGA
* * * * *
79514 CTAAGTTTATGGTGCCTAGTCCAGAAAAGAA-TAGGGATTAGTATGACTATTCATGTTTATCTCA
386 CTATGTTTATGGTGCCTAATCCTGAAAAGAATTA-GGATTAGTATGACTATTCATGTTTGTCTTA
** *
79578 TTTAAGAGAAAAACTTTGATTCTAAC
450 TTTAAGAGGCAAACTTTGATTCTATC
* * **
79604 AAAAACGGTTGAAAGAAAAGCATTTT-TTGCGGTACCAAAGCATCAATGTCATGTATCCTAATGA
1 AAAAATGGTGGAAAGAAAAGC-TTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * * * ** * * *
79668 AGAGAATGTGCTTTTGGTTCCCAATCTTGAAAAGAATGAAGACTATTTTGAGAATCGAGGCTTGT
65 AG-GAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * *
79733 CATATTTATGGGATGAA-TCTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAA
129 CTTATTTAAGGGATGAACT-TTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAA
* * *
79797 GAAAATCATCGATATCATTTATCCTAATGAGGAGAATGTCTTTATAGTGCCTAATCACAAAATGA
193 TAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* ** * * *
79862 AAG-AGATCATTACTAGAATCCACATTTGTCTCCTTCGAGGTACGAACTTAGACTTT-TCAAAAA
258 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAA
* * *
79925 TTGGTGGGAAGAAAGCCTTTCTTGTGAAACGAAAGCATCAATATTGTCTAT-CTAATGAGAAGAC
322 TTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGAC
* ** **
79989 TATGTTCATGGTGCCTAAT-CTAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTACCTTAT
387 TATGTTTATGGTGCCTAATCCT-GAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTAT
* *
80053 TAAAGAGACAAACTTTGATTCTATC
451 TTAAGAGGCAAACTTTGATTCTATC
* * * * * *
80078 AAAAACGGTTG-AAGAAAAACATTTCTTGCAACACCAAAGCATCAATGTCATGTATCCTAATAAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * ** * * * *
80142 GAGAATGTGTTTTTGGTTCCCAATCTTGAAAGGAATGGAGACCATTATGAGAATCGATGGTTGTC
66 G-GAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * *
80207 ATATTTAA-GGATGAA-TCATGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
130 TTATTTAAGGGATGAACT-TTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* * *
80270 AAAATCATCGATATCATTTATCCTAATGAGGAGAATGTGTTTGTTA-TGTCC-AATCACAAAAGG
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTT-ATAGTG-CCTAATCACAAAATG
* * * * * * *
80333 AATGATGATCTTTACTAAAATCCATGTTTGTCTCGTTTCAGGCATGAACTTA-AATTT-TACAAA
257 AATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATA-AAA
* * * * * * * * *
80396 ATTTGTAGGAAGAAAGACTTTCTTGCAAAACCAAAGCATCTATAT-ATGTATCCTTATGCGAAGA
321 ATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGA
* ** * *
80460 CTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTGGTATGACTATTCATGTTTGCCTT-T
386 CTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTAT
* * *
80524 TACAAGAGACAAATTTTGATTCTATC
451 T-TAAGAGGCAAACTTTGATTCTATC
* * *
80550 AAAAATGGTGGAAAGAAAAGCTTTTCCTTACGATACCAAAGCATCAATGTCATGCATCCTAATGA
1 AAAAATGGTGGAAAGAAAAGCTTTT-CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * * * * * **
80615 AGGGAATGT-TTTCTTGGTTCCCAATCTTCAAAAGAATAGAAACTGTTATGTGAATCAATATTTG
65 A-GGAATGTGTTT-TTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTG
**** * * * *
80679 TAAAATTTAAGGGATGAATTTTGATTTTTAGGAAAATAGGGCAAAGAAAAAATTTTCATGCAAAA
128 CCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAA
* * * * *
80744 GAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGTCTAATCACCAAAGGA
193 TAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * * * * *
80809 AGGAAGATCATTACTAGAATCTATGTTGGACTCATTTGAGGCACGAACTTGGACTTTACAAAAAT
258 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAAT
* * * * *
80874 TGGTGGGAAGAAGGTCTTCCTTTCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAAACT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* **
80939 ATG-TTATGGTGCCTAATCCAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTT
388 ATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
* *
81003 AAGAATGCAAACTTTGATTCGATC
453 AAG-AGGCAAACTTTGATTCTATC
* * * * *
81027 AAAAACGGTGGAAAGAAAAGCTTTCCTTACTACACCAAAGCATCAATGTCATGTATCCTAATGAG
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * * * *
81092 GAGAATGTGTTCTTAGTTCCAAATCTTGAATAGAATGGAGACTATTATGAGAATTGAA-GCTTGC
66 G-GAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAA-TCAATGCTTGC
* * * * * * *
81156 CATATTTAAGGGATTAATTTTGTTTTTAAGGAAAATAGGGAAAAGAAAAGATTTCCATGCAAAAG
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* *
81221 AAAATTATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATCGTGCCTAATCACAAAATGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * *
81286 TGAAGATCGTTACTAGAATGCATGTTTGACTTATTTGAGGCACGAACTTAGACTTTATAAAAATT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* * * *
81351 GGTGGGAAAAAAGCCTTTCTTGCGAAACCAAAGCATC-ATAATTGTTTATCCTAATAAGAAGACT
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAAT-ATCGTCTATCCTAATGAGAAGACT
* * ** * *
81415 ATG-TTATGGAGCCTAATCCAGAAAAGAATGGGGAATAGTATGACTATTCATGTTTGTCTCATTT
388 ATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
* *
81479 AAGAGACAAACTTTGATTCTAAC
453 AAGAGGCAAACTTTGATTCTATC
* *
81502 AAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * ** * * * *
81567 GAGAATGTGTTTTTGGTTCCCAATCTCGAAAGGAATGGAGACCATTATGAGAATCGATGGTTGTC
66 G-GAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * *
81632 ATATTTAAGGGATGAA-TCATGATTTTAGGGAAAATAGGGCAAAGAAAA-ATTTCCATGCAAAAG
130 TTATTTAAGGGATGAACT-TTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* * * *
81695 AAAATCATCGATATCATTTGTCCTAATGAGGAGAATGTGTTTGTTA-TGTCC-AATCACAAAAGG
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTT-ATAGTG-CCTAATCACAAAATG
* * * * * *
81758 AATGAAGATCTTTACTAAAATCCATGTTTGTCTCGTTTGAGTCATGAACTTA-AATTT-TACAAA
257 AATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATA-AAA
* * * * * * * * *
81821 ATTTGTAGGAAGAAAGACTTTCTTGCAAAACCAAAGCATCTATATCATGTATCCTTATGCGAAGA
321 ATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGA
* ** * *
81886 CTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTGGTATGACTATTCATGTTTGCCTT-T
386 CTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTAT
* * *
81950 TACAAGAGACAAATTTTGATTCTATC
451 T-TAAGAGGCAAACTTTGATTCTATC
* * * *
81976 AAAAATGGTGGAAAGAAAAGCTTTTCCTACGATACCAAAGCATCAATGTCATGCATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * * ** *
82041 GGGAATGT-TTTCTTGGTTCCCAATCTTGAAAAGAATAGAAACTATTATGTGAATCAATATTTGT
66 -GGAATGTGTTT-TTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
*** * * * * *
82105 AAAATTTAAGGGATGAATTTTGATTTTTAGGAAAATAGGGCAAAGAAAAAATTTTCATGCAAAAG
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* * * *
82170 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGTCTAATCACCAAAGGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * * *
82235 GGAAGATCATTACTAGAATCTATGTTGGACTCATTTGAGGCACGAACTTGGACTTTACAAAAATT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* * * * * *
82300 GGTGAGAAGAAGGTCTTCCTTTCGAAACCAAAGCATCAATATCATCTATCCTAATGAGAAGACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* **
82365 TG-TTATGGTGCCTAATCCAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTA
389 TGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTA
* * *
82429 AGAGACAAACTTTGATTATAAC
454 AGAGGCAAACTTTGATTCTATC
* * * *
82451 AAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATTCTATTGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
*
82516 GGGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTACC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * *
82581 TTATTTAAGGG-TGAACTATGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCGAAATA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * * **
82645 AAATCTTCAATATCATTTATCGTAATGAGGAGAATGCGTTTATAGTGCCTAATCACTCATTTGAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCA--CA--AAAT
* * * * * *** *** * * * ** *
82710 GCATTGGCTTAGA-CTTTACAAAAATTGGTAGGGAGAAAGC-CTTTCTTGCGAAACCAAAGCATC
256 G-AAT-G--AAGATCATTACTAGAATCCAT-GTTTG---TCTC-AT-TTGAGGCA-CGAA-C-T-
* ** ** ** * * ** * ** *
82773 AATATCATCTATCCTAAAAA--GAAGACTACGATTATG-CTACCTAATTCGAAAAAAAATGGGGA
307 --TA-GA-CT-TTATAAAAATTGGTG-GGAAGA--AAGCCTTTCT--TGCGAAACCAAA---GCA
* * ** * * * * * * ** * *
82835 TTAGCATGACTATTCATGTTTGTTTTATTTAAGAATGCAAACTTTGATT-CGAT-CAAAAACGGT
359 -T--CA--A-TA-TC--GTCTATCCTA-ATGAGAA-G---ACTATGTTTATGGTGCCTAATC-CT
* * ** ** * * ** *** *
82898 GGAAAGAA-AAGCTTTCCTTACTACACCAAAGCATCAATGTCATGTATCCTAACGAGG-AGAA-T
409 GAAAAGAATTAGGATT-AGTA-T-GA-CTATTCATGTTTGTC-T-TAT-TTAA-GAGGCA-AACT
*
82960 GTG-TTCTTAGTTC
465 TTGATTC-TA--TC
* * * * * * * *** *
82973 -CAAAT-CTTGAATAGAATGGAGACTATT-ATGAGA-ATTGAAGC-T---TGTCA--TAT-TTAA
1 AAAAATGGTGGAA-AGAA--AAG-CTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAA
* * ** * * * *** ** ** ** * *
83027 GGGATTAATTTTGATTTTAAGG-A--AAATAGGGAAAAGAAAAGATTTCCATGCAAAAGAAAATT
62 TGAAGGAA-TGTG-TTTT-TGGTACCCAATCTTGAAAAGAATGGA--GAC-TG-TTACG-AGA--
* * * * * **
83089 ATCAATATCATTTATCC-TA-ATAA-GGA-GAA-TGTG--TTTATCGTGCCTAATCA---CAAA-
117 ATCAAT-GC--TT-GCCTTATTTAAGGGATGAACTTTGATTTTA-AG-G-AAAAT-AGGGCAAAG
* **** ** * * * * * *
83143 ATAA-ATGAAGAT-CGTTACTAGAATGCAT--GTTTGACTTAT--T--TGAGGCACGAACT-TAG
174 AAAACATTTCCATGC-AAAATAAAAT-CATCAATATCATTTATCCTAATGAGG-A-GAA-TGT-G
* ***** ** * * *** * * *
83199 ACTTTACAAAAATTGGTGGGAAAAAAGCCTTTCTTGCGAA-ACCA--A--AGCATCAAAATCGTT
233 --TTTATAGTGCCTAAT--CACAAAA----TGAAT--GAAGATCATTACTAGAATC--CAT-GTT
* * ** * * ** * * * * * *
83259 TATCCTAATGAGAAG-ACTATGTTATGGAGCCTAATCTAGAAAAGAATGG-GGAATAGTATGACT
285 TGT-CTCATTTGAGGCACGAACTTA--GA--CT--T-TATAAAA-ATTGGTGGGA-AGAAAGCCT
* **** * * * ** * *
83322 ATTCATGTTTGTCTCATTTGAGAG-A-CAA-ACTTTGATTCTAACAAAAATGATTGAAAGA-AAA
340 -TTC----TTG-C-GAAACCAAAGCATCAATA--TCG--TCTATC-CTAATGA--G-AAGACTAT
* * * ** * * * * * *
83383 GCTT-T--T--CT--TGC-GACACCAA--AGCATCA--ATG-----TCATG--TATCCTAATGAA
390 GTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTAA
* * ***
83429 G-GGAATAAGTTT--TTGGCTC
455 GAGGCA-AACTTTGATTCTATC
** * * * * * * * * **
83448 -CCAAT-CTTGAAAGGAATGGAGACTGTTAC--GAGA-ATCC-ATGC-T---TGTCATATTTAAG
1 AAAAATGGTGGAAA-GAA--AAG-CT-TTTCTTGCGACA-CCAAAGCATCAATGTCATGTAT-CC
** * * ** * *** ** *** * ** * ** * *
83503 GGATGAA-TATTGAT-TTTAAGGAAAATAGGGCAAAAAAAGATTTTCAGGC--AAAAGAAAATC-
59 TAATGAAGGAATG-TGTTTTTGGTACCCA-ATCTTGAAAAGA-ATGGAGACTGTTACGAGAATCA
* * * * * ** *
83563 ATCGATAT-CATTTATCCTAATAAGGAGAATGTGATTATTG-TGTCTAATCACAAA-A-GG-AAT
121 AT-GCT-TGC-CTTAT--T--TAAGG-G-ATG-AACT-TTGAT-TTTAAGGA-AAATAGGGCAAA
* * * * * * ** * * * * **
83623 CAAGATCATTTCTAGAATCCATATTGGACTCATTTAAGGGAGGAACTTAGACTTTA-CAAAAAGT
173 GAA-AACATTTC---CATGCAAAATAAAATCA--TCA---A--TA--T-CA-TTTATC-CTAA-T
* **** * ** * * * ** ** * * ** *
83687 GGAGGGAAAAAAACCTTTCTTTTGAAACCAAAGCATCAATATCGTCT-ACCATAATGAGAAGACT
221 -GA-GG-AGAATGTGTTTATAGTG---CCTAATCA-CAAAAT-GAATGAAGATCATTACTAGAAT
** * * * * * ** * * * * *
83751 ATAT-TTATGATGCCTAATCTTGAAAAGAATGGGGA-TTAGTAAGATTATTCATATTTGTCTTAT
278 CCATGTT-TG-T--CTCAT-TTG--AGGCA--CGAACTTAG--ACTTTA-TAAAAATTG--GT-G
** ** * * ** * *
83814 TTAAGAGATAAACTTT-TATTCTATCCCAAAGCATCAATGTC-ACGTATCCTAATGAAGGAA-A-
328 GGAAGA-A-AGCCTTTCT-TGCGAAACCAAAGCATCAATATCGTC-TATCCTAATG-A-GAAGAC
* * * * * * * * * * * *
83875 TGTGTTTTTGGTTCCCAATCTTGAAAAGAA-TGGAGACT-GTTACGA-GAATCAATGCTTGCCTT
387 TATGTTTATGGTGCCTAATCCTGAAAAGAATTAG-GATTAG-TATGACTATTC-ATGTTTGTCTT
* * **
83937 ACTTAAG-GG-ATGAACTTTGATTTTAAG
449 ATTTAAGAGGCA--AACTTTGATTCTATC
* * * * * * ** * * * *
83964 GAAAATAGG-GCAAA-AGAAA-CATTTCCATGCAAAATAAAATCATCAATATCATTTATCCTAAG
1 AAAAAT-GGTGGAAAGA-AAAGC-TTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAT
** ** * * * ** * * * ** * *
84026 GAGAAAAATGTGTTAATAGTGCCTAAT-TACAAAATGATTGAAGA-TCATTATTAGAATCCATGT
63 GA-AGGAATGTGTTTTTGGTACCCAATCTTGAAAA-GAATGGAGACT-GTTACGAGAATCAATGC
* * * * * * * * * * *
84089 TTGACTTATTTGATGCACCG-GCTTAGACTTTATA-GAAATTGGTAGGG---AGAAAGCCTTT-C
125 TTGCCTTATTTAAGGGA-TGAACTTTGATTTTA-AGGAAA---ATAGGGCAAAGAAAACATTTCC
* * ** * * * * * * * * *
84148 TTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGATTATGGTACCTAATC-
185 ATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCA
** * ** ** * * * * * *
84212 CTGAAAA-GAATGGGGATTAGCAAC-ACTATTCATGTTTATCTTATTTAAGAG-ACAAACTTTGA
250 C--AAAATGAATGAAGATCA-TTACTAGAATCCATGTTTGTCTCATTTGAG-GCACGAACTTAGA
** * * * * * * *
84274 -TTCTA-AGAAAAACGGTTGAAAGAAAAGCTTTTCTTGC-AACACCAAAGCATCATTGTCTTGTA
311 CTT-TATA-AAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCGTCTA
* * * * * *
84336 TCCTAATGA-AGGGA--ATGTGTTATTGGCT-CCCAATCTTGAAAGGAA-TGGAGATT-GTTACG
372 TCCTAATGAGA-AGACTATGT-TTA-TGG-TGCCTAATCCTGAAAAGAATTAG-GATTAG-TATG
* * * * * * **
84395 A-GAATCAATGCTTGTCATATTTAAG-GG-ATGAATTTTGATTTTAAG
431 ACTATTC-ATGTTTGTCTTATTTAAGAGGCA--AACTTTGATTCTATC
* * * * * * ** * * * *
84440 GAAAATAGG-GCAAAGAAAAGATTTTCATGCAATAGAAAATCATCAGTATCATTTATCCTAATG-
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* ** * * * * * *
84503 AGGAAATTGTGTTTATTGTGT--CTAATC-ACAAAAGGAATGAAGATTTTTACTAGAATCCATGT
65 AGG-AA-TGTGTTT-TTG-GTACCCAATCTTGAAAA-GAATGGAGACTGTTACGAGAATCAATGC
* * * * * * * * * * *
84565 TTGTCTCATTTGAGGCATTAACTTAGACTTTTCA--AAAATTGGTG-AGAAGAAAGCCTTT-CTT
125 TTGCCTTATTTAAGGGATGAACTTTGA-TTTTAAGGAAAATAGG-GCA-AAGAAAACATTTCCAT
* ** * * * * * * * *
84626 GCGAAACCAAAGCATCAATATCGTCTATCATAATAAGAAGACTATGTTTATAGTGCCTAATC-CT
187 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC-
** * * ** * * * * **
84690 GAAAA-GAATGGGGATTAGTA--AGACTATTTATGTTTATCTTATTTAAGAG-ACAAACTTTCA-
251 -AAAATGAATGAAGATCATTACTAGA--ATCCATGTTTGTCTCATTTGAG-GCACGAACTTAGAC
* *** * * * * * * *
84750 TTCTA-ACAAAAATGGTTAAAAGAAAAG-CTTCTCTTGTGACACTAAAGCATAAATGTCTTGTAT
312 TT-TATA-AAAATTGGTGGGAAG-AAAGCCTT-TCTTGCGAAACCAAAGCATCAATATCGTCTAT
** * * * * * * *
84813 CCTAA--AGAAGAGAATGTAGTTTTGGTTCCCAATCTTGAAAAGAA-TAGAGACT-GTTACGA-G
373 CCTAATGAGAAGACTATGT--TTATGGTGCCTAATCCTGAAAAGAATTAG-GATTAG-TATGACT
* * * * * **
84873 AATCAATGCTTGTCATATTTAA-AGG-ATGAATTTTGATTTTAAG
434 ATTC-ATGTTTGTCTTATTTAAGAGGCA--AACTTTGATTCTATC
* * * * * ** * ** * * * *
84916 GAAAATAAG-GCAAAGAAAAGATTTTCATGTAAAAGAAAATCATCAGTATCATTTATCCTAATG-
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
** * * *
84979 AGGAAAATGTGTTTATTGTGT--TTAATC--GCAAAAGGAATGAAGATCT-TTACTAAAATCCAA
65 AGG--AATGTGTTT-TTG-GTACCCAATCTTG-AAAA-GAATGGAGA-CTGTTACGAGAAT-CAA
* * * * * * * * ** * *
85039 -GTTTGTCTCATTTGAGGCATGAACTTAGACTTTTCA--AAAATTGGTGGGAAGAAAGC-TTTTC
122 TGCTTGCCTTATTTAAGGGATGAACTTTGA-TTTTAAGGAAAATAGG-GCAAAGAAAACATTTCC
* * ** * * * * * * * * *
85100 TTGCGAAACCAAAGCATCAATATCGTCTATCCTTATGAGAAGACTATG-TTATGGTGCCTATTCT
185 ATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-
* ** * * * * * * *
85164 AGAAAA-GAATGGGGA-CA--AGTATGACTATTCAAGTTTGTCTGATTTAAGAG-ACAAACTTTG
249 ACAAAATGAATGAAGATCATTACTA-GA--ATCCATGTTTGTCTCATTTGAG-GCACGAACTTAG
** * * * * * * * *
85224 A-TTCTA-ACAAAAACGATTGAAAGAAAAGCTTTTCTTGC-AACACCAAAGCATCATTGTCTTGT
310 ACTT-TATA-AAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAA-ACCAAAGCATCAATATCGTCT
** ** * ** * ** **
85286 ATCCTAAT-----G--T-T-TTTGATTCTAACAAAAAC-GATTGAAAGAA-AAGCTTTTCT-TGC
371 ATCCTAATGAGAAGACTATGTTT-ATGGTGCCTAATCCTGA---AAAGAATTAGGATTAGTATG-
* ** ** * * * * * *
85339 AACACCAAAGCATCATTGTCTTGTATCCTAATGAAGG-GAA-TGTGTTTTTGGCTC
431 ---A-CTATTCATGTTTGTC-T-TAT-TTAA-G-AGGCAAACTTTGATTCT--ATC
** ** * ** *** * * * * * * * *
85393 -CCAATCTTGAAAAGAATGGAGATTATTACGAGAATCAATGC-T---TGTCA--TAT-TTAAGGG
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGA-CACCAAAGCATCAATGTCATGTATCCTAATGA
* * * ** * *** * ** ** ** ** *
85450 ATGAATTTTGATTTTAATGA--AAATAGGGCAAAGAAAAGATTTCCATGCAAAAAAAAAATC-AT
65 AGGAA-TGTGTTTTTGGT-ACCCAATCTTGAAAAGAATGGA--GAC-TG--TTACGAGAATCAAT
* * * * * ** * ****
85512 -CAATAT-CATTTATCCTAA-CGAGGAAATTGTGTATATTGTGTCTAATCACAAAAAGAATTAAG
123 GC--T-TGC-CTTAT-TTAAGGGATGAACTT-TG---A-T-T-T-TAAGGA-AAATAGGGCAAAG
* ** ** * ** ** * * **
85574 ATATTTACTAGAATCCATGTTTGTCTCATTTGAGGCATTAACT-TAGACTTT-TCAAAAATTGGC
174 A-A--AAC-A-TTTCCA----TG-CAAAATAAAATCATCAA-TAT-CA-TTTATC-CTAA-T---
* * ** * * * * ** * **
85637 GAGAAGAAAGCCTTTCTTGTG---AAAC-CAAAGCATCAATGTCG-TCTATCCTAATGAGAAGAA
221 GAGGAGAATGTGTTTATAGTGCCTAATCACAAA--ATGAATGAAGATC-AT--TACT-AGAA-TC
* * ** * * * * * ***
85697 AATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTAAGACTATTCATGTTTATCTTATT
279 CATG-TT-T-GT--CTCAT--T-TGAGGCA---CGA--ACTTAGACT-TT-A----TA-AAAATT
** * * * * * ** * * ** *
85762 TATGAG-ACAAA--CTTTGATT-C-TAACAAAAATGGTTGAAAGAAAAG-CT-TCTCT--TGCG-
324 GGTGGGAAGAAAGCCTTT-CTTGCGAAAC-CAAA-GCAT-CAA-TATCGTCTATC-CTAATGAGA
* * ** * * * *
85817 ACACTAAAGCATAAAT-GT-CTTGTATCCTAAAGAAGGGAATGTTGTTTTAGCTCCCAATCTTGA
383 AGACT-ATG--TTTATGGTGCCT-AATCCTGAA-AA--GAA-------TTAG-----GA--TT--
* * * * *
85880 AAAGAATGGAGACTATTACGAGAATCAATGCTTGTCATATTTAAG-GG-ATGAATTTTGATTTTA
425 --AGTAT---GACTA-T-------TC-ATGTTTGTCTTATTTAAGAGGCA--AACTTTGATTCTA
**
85943 AG
474 TC
* * * * * ** * ** * * * *
85945 GAAAATAAG-GCAAAGAAAAGATTTTCATGTAAAAGAAAATCATCAGTATCATTTATCCTAATGA
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * ** * * * * *
86009 AGAAAATGTGTTTATTGTGT--CTAATC-ACAAAAGGAATGAAGATCT-TTACTAAAATCCATGT
65 AG-GAATGTGTTT-TTG-GTACCCAATCTTGAAAA-GAATGGAGA-CTGTTACGAGAATCAATGC
* * * ** * ** * * ** * ** *
86070 TTGTCTCATTTGAGACATGAACTTAGACAATTCA--AAAATTGGTGGGAAGAAAGCCCTT-CTTG
125 TTGCCTTATTTAAGGGATGAACTTTGA-TTTTAAGGAAAATAGG-GCAAAGAAAACATTTCCATG
* ** * * * * * * *
86132 CGAAACCAAAGCATCAATATCCTCTATCCTAATGAGAAGAACTATGTTCATGGTGCCTAATC-CT
188 CAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAA-TGTGTTTATAGTGCCTAATCAC-
** * * * * * * * * ** *
86196 GAAAA-GAATGGGGATTAGTA-T-GACTATTCAAGTTTATCTTATTTAAAAG-ATAAACTTTGA-
251 -AAAATGAATGAAGATCATTACTAGA--ATCCATGTTTGTCTCATTT-GAGGCACGAACTTAGAC
** * * * * * * * *
86256 TTCTA-ACAAAAACGGT-TGAGAGAAAAGCTTTTCTTGTGACACCAAAGCACCAATGTCTTGTAT
312 TT-TATA-AAAATTGGTGGGA-AG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTAT
* * * * * * * * *
86319 CCTAA--AGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAA-T-GGA-GACTGATCCGAC
373 CCTAATGAGAA--GACTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGT-AT--GAC
* * * * * *
86379 -AATCAACGCTTGCCTTATTTAA-ACG-ATGAACTTTGATT-TATG
433 TATTC-ATGTTTGTCTTATTTAAGAGGCA--AACTTTGATTCTATC
* * ** * * ** * * *
86421 GAAAATAGG-GCAAAGAAAATATTTTCATG-GAAAAGAAAATCATCAATATCATTTATCCTAATG
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCG-ACACCAAAGCATCAATGTCATGTATCCTAATG
* * * * * ** * * *
86484 AGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCAT-TT-CTAGAATGC-TTG
64 AAG-GAATGTGTTTTTGGTACCCAATCTTGAAAA-GAATGGAGA-C-TGTTACGAGAAT-CAATG
* * * * * * * * ** * * *
86545 TTTGACTTATTTGAGGCACGAACTTAGACTTTTCA--AAAATTGGTGGGAAGAAAGC-TTTTCTT
124 CTTGCCTTATTTAAGGGATGAACTTTGA-TTTTAAGGAAAATAGG-GCAAAGAAAACATTTCCAT
* ** * *** * * * * * *
86607 GCGAAACCAAAGCATCAATATCGCCTATCCTAATGAGAAGACTATG-TTATGGTGCCTATTCTAG
187 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-AC
* ** * * * * * * *
86671 AAAA-GAACGGGGA-C--TAGTATGACTATTCAAGTTTGTCTGATTTAAGAG-ACAAACTTTGA-
251 AAAATGAATGAAGATCATTACTA-GA--ATCCATGTTTGTCTCATTTGAG-GCACGAACTTAGAC
** * * * * * * * * * * *
86730 TTCTA-ACAAAAACGGTTGAAATAAAAGCTTTTATGGCGACACCAAAGCGTCAATGTCATGTATC
312 TT-TATA-AAAATTGGTGGGAA-GAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATC
* * * * * * * * * *
86794 CTAATCATG-GGAATGTGTTTCTGGCT-CCTAATCTTGAAAGGAA-TGGAGATT-GTTACGA-GA
374 CTAATGA-GAAGACTATGTTTATGG-TGCCTAATCCTGAAAAGAATTAG-GATTAG-TATGACTA
* * * * * **
86854 ATCAATGCTTGTCATATTTAAG-GG-ATGAATTTTGATTTTAAG
435 TTC-ATGTTTGTCTTATTTAAGAGGCA--AACTTTGATTCTATC
* * * * * * * ** * * * *
86896 GAAAATAGG-GCAAAGAAAAGATTTCCATGCAAAAAAAAAACATCAGTATCATTTATCCT-AT-A
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * *** ** * *
86958 GAGGAAAATGTGTTTACTGTGT--CTAATCACAAAAAGAATAAAGATCT-TTACTAGAATCTATG
65 -AGG--AATGTGTTT-TTG-GTACCCAATCTTGAAAAGAATGGAGA-CTGTTACGAGAATCAATG
* * ** * * * * ** * ** * * *
87020 TTTGTCACATTTGAGGAACGAACTTAGACTTTCCA--AAAATTGGTGGGAAGAAAGCCTTT-CTT
124 CTTGCCTTATTTAAGGGATGAACTTTGA-TTTTAAGGAAAATAGG-GCAAAGAAAACATTTCCAT
** * * * * * * *
87082 GCAAAACCAAAGCATCAATGTCGTCTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATC-C
187 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGA-ATGTGTTTATAGTGCCTAATCAC
* ** * * ** * * * * * *
87145 TGAAAAAGAATGGGGATTAGTA-TCACTATTCATGTTTATCTTATTTAAGAG-ACAAACTTTGA-
251 --AAAATGAATGAAGATCATTACT-AGAATCCATGTTTGTCTCATTTGAG-GCACGAACTTAGAC
* * ** ** * * * * *
87207 TTCTA-ACAAAAATGGT-TGACAGAAAAACTTCTCTTGCGACGCTAAAGCATAAATGTCTTGTAT
312 TT-TATA-AAAATTGGTGGGA-AGAAAGCCTT-TCTTGCGAAACCAAAGCATCAATATCGTCTAT
* * * * * *
87270 CCTAA--AGAAGGGAATGTAGTTT-TGGTTCCCAATCTTGAAAAGAA-T-GGATATTGT-T-ACA
373 CCTAATGAGAA--GACTAT-GTTTATGGTGCCTAATCCTGAAAAGAATTAGGAT-TAGTATGAC-
* * * * * ** * * **
87328 AGAATCAATGCTTGTCATATTTAAGGGGTGAATTTTGATTTTAAG
433 -TATTC-ATGTTTGTCTTATTTAAGAGGCAAACTTTGATTCTATC
* * * ** * ** * ** * * * *
87373 GAAAATAAG-GCAAAGAAAAG-AATTCAATGTAAAAGAAAATCATCAGTATCATTTATCCTAAT-
1 AAAAAT-GGTGGAAAGAAAAGCTTTTC-TTGCGACACCAAAGCATCAATGTCATGTATCCTAATG
* * * * * *
87435 TAGGAAAATGTGTTTATTGTGT--CTAATC--GCAAAAGGAATGAAGATCT-TTACTAAAATCCA
64 AAGG--AATGTGTTT-TTG-GTACCCAATCTTG-AAAA-GAATGGAGA-CTGTTACGAGAATCAA
* * * * * * * * * * **
87495 TGTTTGTCTCATTTGAGGCATGAACTTAGACTTTTCA--AAAATTGGTAG-GAAGAAAGCCCTT-
122 TGCTTGCCTTATTTAAGGGATGAACTTTGA-TTTTAAGGAAAATAGG--GCAAAGAAAACATTTC
* * ** * * * * * * *
87556 CTTGCGAAACCAAAGCATCAATATCATCTATCATAATGAGAAGACTATGTTTATGGTGCCTAATC
184 CATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC
** * * * * * * * *
87621 -CTGAAAA-GAATGGGGATTAGTA-T-GACTATTCATGTTTATCTTATTTAAGAG-ACAAACTTT
249 AC--AAAATGAATGAAGATCATTACTAGA--ATCCATGTTTGTCTCATTTGAG-GCACGAACTTA
** ** * * * * *
87681 GA-TTCTA-ACAAAAACGGT-TAAAGAAAAGCTTTTCTTGCGATACCAAAGCATCAATGTCTTAT
309 GACTT-TATA-AAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCT
* * * * * * * *
87743 ATCCT-AT-AGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAA-TGGAGATT-GTCA-CA
371 ATCCTAATGAGAA--GACTATGTTTATGGTGCCTAATCCTGAAAAGAATTAG-GATTAGT-ATGA
** * * * * * * *
87803 AGAATCGATGCTTGTCATATTTAAG-GGATAAATTTTGATTTTATG
432 CTATTC-ATGTTTGTCTTATTTAAGAGG-CAAACTTTGATTCTATC
* * * * * * * ** * * * * *
87848 GAAAATAGG-GCAGAGAAAAGATTTTCATACGAAAGAAAATCATTAGTATCATTTATCCTAAT--
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* ** * *
87910 AGGAAAATGTGTTTATTGTGT--CTAATC-ACAAAAGGAATGCAGATCT-TTA-GTAGAATCCAT
65 AGG--AATGTGTTT-TTG-GTACCCAATCTTGAAAA-GAATGGAGA-CTGTTACG-AGAATCAAT
* * * * * * * * ** * * *
87970 GTTTGTCTCATTTGAGGCATGAACTTAGACTTTTCA--AAAATTGGTGGGAAGAAAGCCTTT-CT
123 GCTTGCCTTATTTAAGGGATGAACTTTGA-TTTTAAGGAAAATAGG-GCAAAGAAAACATTTCCA
* ** * * * * * * *
88032 TGCATAACCAAAGCATCAATATCATCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTT
186 TGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-A
* ** * * * * * * *
88097 GAAAA-GAATGGGGA-C--TAGTATGACTATTCAGGTTTATCTCATTTAAGAG-ACAAACTTTGA
250 CAAAATGAATGAAGATCATTACTA-GA--ATCCATGTTTGTCTCATTTGAG-GCACGAACTTAGA
** * * * * * * * * *
88157 -TTCTA-ACAAAAACGTTTGAAAGAAAAGCTTTTATTGCGACACCAAAGCATCAATGTCTTGTAT
311 CTT-TATA-AAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTAT
*** * * * ** * * * *
88220 CCTAA--AGAAGGGAATGTACTTTTGGTTCCCAATATTGAAAAGAA-TGGAGACTATTACGAC-A
373 CCTAATGAGAAGACTATGT--TTATGGTGCCTAATCCTGAAAAGAATTAG-GATTAGTATGACTA
* * * * **
88281 ATCAATGCTTGCCTTATTTAA-AGG-ATGAACTTTGATTTTAAG
435 TTC-ATGTTTGTCTTATTTAAGAGGCA--AACTTTGATTCTATC
* * ** * * * * * * * * *
88323 GAAAATAGG-GCAAAGAAAATATTTCCATGCAAAACAAAATCATCAATTTCATTTATCCTGATGA
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * * * ** * * * * *
88387 GGAGAATGTG-TTTGGAGTGCCTAATC-ACAAAATAAATGAATATCAT-TT-CTAGAATGC-TTG
65 AG-GAATGTGTTTTTG-GTACCCAATCTTGAAAA-GAATGGAGA-C-TGTTACGAGAAT-CAATG
* * * * * * * * ** * * *
88447 TTTGACTTATTTGAGGCACGAACTTAGACTTTTCA--AAAATTGGTGGGAAGAAAGCCTTT-CTT
124 CTTGCCTTATTTAAGGGATGAACTTTGA-TTTTAAGGAAAATAGG-GCAAAGAAAACATTTCCAT
* * ** * * * * * * * *
88509 ACGAAACCAAAGCATCAATATCGTCTATCATAATGAGAAGACTGTG-TTATGGTGCCTATTCTA-
187 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-AC
* ** * ** * * * * * * * *
88572 AAAAAGAATGGGGATTAGGA-T-GCCTATTCAAGTTTATCTTATTTAAGAG-ACAAACTTTGA-T
251 AAAATGAATGAAGATCATTACTAG--AATCCATGTTTGTCTCATTTGAG-GCACGAACTTAGACT
* * * * * * * * * * *
88633 TCTA-ACAAAAATGGTTGAAAGAAAAGCTTTTATTACTACACCAAAGAATCAA-AGTCATGTATC
313 T-TATA-AAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATA-TCGTCTATC
* * * * * * * * *
88696 CTAATCA-AGGGAAC-GTGTTGT-TGGGTCCCTGA---TGAAAACAA--AGGAAGGTCCATTGAA
374 CTAATGAGA-AG-ACTATGTT-TAT-GGTGCCTAATCCTGAAAAGAATTAGG-A--T-TAGT-AT
* ** * ** * * * ** ** *
88753 GACAAAGACCTG-AAGGCATTGGAAGGGTTTCAAG-GACCAA-TGACGAGGGCAATGGC
430 GAC-TATTCATGTTTGTC-TT---A---TTT-AAGAGGCAAACT-TTGA-TTCTAT--C
* * * * * **** * *
88809 AAAGA-GGATAAAGG-AAGACCTAGAGGAGATGGTTGCTGGCCTATTTGAAAGTAGACCCAAT-T
1 AAAAATGG-T---GGAAAGA---A-A--AGCT--TTTCTTG-CGACACCAAAG--CA-TCAATGT
* * * * *
88871 --TGGAGT--T-A-GAAGAGCCCAA-GCTAGTTAATTGCATA---TAT-TTG-GAAGATATGG-G
50 CATGTA-TCCTAATGAAG-G---AATG-T-GTT-TTTG-GTACCCAATCTTGAAAAGA-ATGGAG
*** * * * ** *
88923 -CTCCAATGGATTGAAT-TAGGACTTGGGTTATTTTGTAATAATGGGCCTACTG--GTTGTGACT
105 ACTGTTA-CGA--GAATCAATG-CTTGCCTTA---T-T--TAA-GGG---A-TGAACTT-TGA-T
** *** ** * * *** ** * * ***
88984 TACTTTGGGCTTTATATAGCATA-AAAACTTGTTATTTGGGTTTAACTAAGAGTTGGGC-TTGTT
153 T--TTAAGG-AAAATAGGGCAAAGAAAACAT-TTCCAT--G-CAAAATAA-A-AT---CATCAAT
* * * ** * ** * * * * **** *
89047 AGCATAATAAACC-CCTTAGG-GTTTGTGTTAACTA-TGGCTTATGAGGGCAT-ATAT-AAGCTC
206 ATCAT--TTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAATGA-ATGAAGATC
* ******* * ** ** * ** * *
89107 -TT-GTA-AA--CA-GATTTG-GAGGGGGGAGACATTATTTTTGCAGATTA-AACACATTTTGTG
267 ATTACTAGAATCCATG-TTTGTCTCATTTGAGGCACGAACTTAG-ACTTTATAA-A-AATTGGTG
* ** *** ** ** * * *
89164 TG-AGAGTGTGATTCTTG-G-GTCCGTGAGTGAGCCAACTTTCTGGATCTCAT-C-AA-GAGGCC
328 GGAAGAAAGCCTTTCTTGCGAAACC-AAAG-CA-TCAA-TATC--G-TCT-ATCCTAATGA-G--
* ** ** * * * ** * ** * *
89223 AAGACTCTTGTGGCGATCATTCCT-TTCGGCT--TATCAATCTTGTGATT-GTGGCGCCATTCTT
382 AAGACT-ATGT--TTATGGTGCCTAATC--CTGAAAAGAAT-TAG-GATTAGT-ATG--ACTATT
* ** * ** *** * * *
89284 CATCTCTAATC-TATTCAA-ATTTTGTTATTTTTTCTGCTTCTTTT
437 CATGT-TTGTCTTATTTAAGA----GGCA-AACTT-TGATTCTATC
** ** * * ** * * *
89328 AATTTCTATTCTTGCATTAATAATTCTGTTTATTGTTAGAAATTCATCTC-AAG-ATCATTAT-T
1 AA---AAATGGTGGAAAGAA-AA-GCT-TTTCTTG--CG--A--CA-C-CAAAGCATCA--ATGT
* * * * * ** *
89390 TAGGCAACCT--TG--GGTCATG-GTTGTCATCAGT-CCCAATCTTGAAAAGAATGGAGACTATT
50 CATGTATCCTAATGAAGG-AATGTGTT-T--TTGGTACCCAATCTTGAAAAGAATGGAGACTGTT
* * *
89449 ATGAGAATCAATGCTTGCCTTATTTAAAGGATGAAATTTGATTTTAAGGAAAATAGGGCAAAGAA
111 ACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
* *
89514 AATATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
176 AACATTTCCATGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
* * * * * *
89579 GCCTAATCACAAAATGAATGAAGATCATTTCTAGAATGCTTGTTTGACTTATTTGAGGCACGAAT
241 GCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAAC
*
89644 TTAGACTTT-TCAAAAATTGGTGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTC
306 TTAGACTTTAT-AAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTC
* ** ** * *
89708 TACCCTAATGAGAAGACTATG-TTATGGCACCT-ATTTTAGAAAAG-ATTGGGGACTAGTATGAC
370 TATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCCT-GAAAAGAATT-AGGATTAGTATGAC
* * * * * *
89770 AATTCAAGTTTGTCTGATTTAAGAGACCAACTTTGATTCTAAC
433 TATTCATGTTTGTCTTATTTAAGAGGCAAACTTTGATTCTATC
* * * * * **
89813 AAAAATGGTTGAAAGAAAAGCTTTTCTTGAGATAACAAAGCATCAATGTCTTGTATCCTAAACAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * ** * * * *
89878 GGGAATGTCTTTTTGGTTCCCATTCTTGAAAAGAATGGAAACTATTTTGAGAATCGACGTTTGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
** * * * *
89943 AAATTTAAGAGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * * * *
90008 AAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTA-TGTCTAATTACAAAAGGAA
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAATGAA
* * ** *
90072 TGAAGATCTTTACTGGAATCCATGTTTGTCTCATTTGAGTTAGGAACTTAGACTTT-TCAAAAAT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAAT
* * *
90136 TGGTGGCG-AGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCGTCTATCATAATGAGATGAC
323 TGGTGG-GAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGAC
* ** *
90200 TATGTTTATGGTGCCAAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATT
387 TATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATT
** *
90265 TAAGAGAAAAACTTTGATTCTAAC
452 TAAGAGGCAAACTTTGATTCTATC
* * * * *
90289 AAAAACGGTTGAAGGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAATCAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* *
90354 GGGAATGTGTTTTTGGCT-CTCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGC
66 -GGAATGTGTTTTTGG-TACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * *
90418 CTTATTTAAAGGATAAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAG
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
90483 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * *
90548 TGAAGATCATTTCTAGAATGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTT-TCAAAAAT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAAT
* *
90612 TGGTGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTACCCTAATGAGAAGACT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* ** * * * * *
90677 ATG-TTATGGCGCCT-ATTTTAGAAAAG-ATTGGGGACTAGTATGACAATTCAAGTTTGTCTGAT
388 ATGTTTATGGTGCCTAATCCT-GAAAAGAATT-AGGATTAGTATGACTATTCATGTTTGTCTTAT
* * *
90739 TTAAGAGACCAACTTTGATTCTAAC
451 TTAAGAGGCAAACTTTGATTCTATC
* ** * *
90764 AAAAACGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAAAGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * ** * * * *
90829 GGGAATGTCTTTTTGGTTCCCACTCTTGAAAAGAATGGAAACTGTTTTGAGAATCGACGTTTGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
** * * *
90894 AAATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * * * *
90959 AAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTA-TGTCTAATTACAAAAGGAA
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAATGAA
* * ** * *
91023 TGAAGATCTTTACTGGAATCCATGTTTGTCTCATTTGAGATAGGAACTTAGACTTT-TCAAAATT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAAT
* * * *
91087 TGGTGGGGAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGAGAAGACT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* ** *
91152 ATGTTTATGGTGCCAAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTT
388 ATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
** *
91217 AAGAGAAAAACTTTGATTCTAAC
453 AAGAGGCAAACTTTGATTCTATC
* * * * *
91240 AAAAACGGTTGAAGGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAATCAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * *
91305 GGGAATGTGTTTTTGGCT-CTCAATCTTGAAAAGAATGGAGACTATCACGAGAATCAATGCTTGC
66 -GGAATGTGTTTTTGG-TACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * *
91369 CTTATTTAATGGATGAACTTTGATTTTAAGGAAAATAGGGTAAAGAAAATATTTCCACGC-AAAT
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
91433 GAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
194 -AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * * * *
91498 ATGAAGATCATTTCTAGAATGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTT-TCAAAAA
258 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAA
* *
91562 TTGGTGGGAAGAAAGCCTTTCTTGC-ATAACCAAAGCATCAATATCGTCTATCCTAGTGAGAAAA
322 TTGGTGGGAAGAAAGCCTTTCTTGCGA-AACCAAAGCATCAATATCGTCTATCCTAATGAGAAGA
* ** *
91626 CTATGTATATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTAT
386 CTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTAT
* *
91691 TTAAAAGACAAACTTTGATTCTCA-C
451 TTAAGAGGCAAACTTTGATTCT-ATC
* * * * *
91716 AAAAACGGTTGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCTTGTATCCTAAAGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
** * * *
91781 GGGAATGTACTTTTGGTTCCCAATATTGAAAAGAATGGAGACTGTTACGACAATCAATGCTTGCC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * *
91846 TTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAATATTTCCATGC-AAATG
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT-
* * ** * *
91910 AAAATCATCAATTTCATTTATCCTGATGAGGAGAATGTGTTTGGAGAGCCTAATCACAAAATAAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* ** * * ** *
91975 TGAATATCATTTGTAGAATGCTTGTTTGAATTATTTGAGGCACGAACTTAGACTTT-TCAAAAAT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAAT
* * * * *
92039 TGGCGTGAAGAAAGCCTTTCTTGTGAAACCAAAGCATCAATAGCATCTATCCTAATGAGAAGACT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* * * * * *
92104 ATGTTATAT--CGCCT-ATTCTAGAAAAGAATTGGGACTAGTATGACTATTCAAGTTTGTCTGAT
388 ATGTT-TATGGTGCCTAATCCT-GAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTAT
* *
92166 TTAAGAGACAAACTTTGATTCTAAC
451 TTAAGAGGCAAACTTTGATTCTATC
* * * * * *
92191 AAAAACGATTGAAAGAAAAGCTTTTCTTGCGATACCAAAGCATCAATGTCTTGTATCCTAAAGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * * * * *
92256 GGGAATGTCTTTTTGGTTCCCACTCTTGAAAAGAATGGAAACTATTATGAGAATCGATGTTTGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
** * * *
92321 AAATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGACAAAGAAAAGATTTCCATGCCAAAA-
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATG-CAAAAT
* * * * *
92385 AAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTGTGTCTAATCACAAAAGGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * *
92450 TGAAGATCTTTACTATAACCCATGTTTGTCTCATTTGAGGCAAGAACTTAGACTTT-TCAGAAAT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAAT
* * *
92514 TGGTGGGGAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCGTCTATCATAATGAGAAGACT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
** *
92579 ATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTT
388 ATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
* *
92644 AAGAGACAAACTTTGATTCTAAC
453 AAGAGGCAAACTTTGATTCTATC
* ** * *
92667 AAAAACGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAAAGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
** * *
92732 GGGAATGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * *
92797 TTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCAAGAAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * ** *
92862 AAATCATCAATTTCATTTATCCTGATGAGGAGAATGTGTTTGGAGTGCCTAATCACAAAATAAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* ** * * * * * * *
92927 GAATATTGTTTCTAGAATGCTTGTTTGACTTATTTGAGGAACAAACTTAGACTTT-TCAAAAATT
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAATT
* *
92991 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCATAATGAGAAGACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* ** * * *
93056 TG-TTATGGTGCCT-ATTCTAGAAAAGAATGGGGATTAGTATGACCATTCAAGTTTGTCTGATTT
389 TGTTTATGGTGCCTAATCCT-GAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
*
93119 AAGAGACAAACTTTGATTCTAAT-
453 AAGAGGCAAACTTTGATTCT-ATC
* * *
93142 AAAAATGTTTGAAAGAAAAGCTTTTATTGCGACACCAAAGCATCAATGTCCATGTATCCTAATGA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGT-CATGTATCCTAATGA
* * * *
93207 AGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAAAGAAGACTATTTA-GAGAATCAATGCTTG
65 A-GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACT-GTTACGAGAATCAATGCTTG
* * * *
93271 CCTTATTTAAGTGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAATATTTTCATGCAAAA
128 CCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAA
* * * *
93336 GAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATCGTGCCTAACCAC-AAATGA
193 TAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * * * *
93400 ATGAAGATCATTTCTAAAATCTATATTTATCTCATTTGAGGCACGAACTTAGA-TATTATAAAAA
258 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACT-TTATAAAAA
* * * * *
93464 TTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATTAATATCATGTATCCTTATGAGAGGAC
322 TTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGAC
* * *
93529 TAAGCTTATGGTGCCTAGTCCTGAAAAG-ATTATGGATTAGTATGACTATTCATGTTTGTCTTAT
387 TATGTTTATGGTGCCTAATCCTGAAAAGAATTA-GGATTAGTATGACTATTCATGTTTGTCTTAT
**
93593 TTTGGAGGCAAACTTTGATTCTATC
451 TTAAGAGGCAAACTTTGATTCTATC
* * *
93618 AAAAATGGTTGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGCCATGTATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * *
93683 GGAAT-TGTATTCTTGGTTCCTATTCTCGAAAAGAATGGAGACTGTTACGAGAATCGGA-GCTTG
66 GGAATGTGT-TT-TTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATC-AATGCTTG
* ** * * * *
93746 TCAAATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGACAAAGAAAAGATTTCCATGCCAAA
128 CCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATG-CAAA
* * * * * *
93811 A-AAAATCATCAGTATCATTTATCCTAATGAGGAAAATATGTTTATTGTGTCTAATCACAAAAGG
192 ATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * *
93875 AATGAAGATCTTTACTAGAACCCATGTTTGTCTCATTTGAGGCAGGAACTTAGACTTT-TCAGAA
257 AATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAA
* * * * *
93939 ATTGGTGGGGAGAAAACCTTTCTTGCAAAACCAAAGCGTCAATATCGTCTATCATAATGAGAAGA
321 ATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGA
* ** *
94004 CTATGTTTATGGTGCCTAATCCTGAAAACAATGGGGATTAGTATGACTATTCATGTTTATCTTAT
386 CTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTAT
* * *
94069 TTAAGAGACCAACTTTGATTCTAAC
451 TTAAGAGGCAAACTTTGATTCTATC
* ** * *
94094 AAAAACGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAAAGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
** * *
94159 GGGAATGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * * *
94224 TTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTTCAAGAAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * * ** *
94289 AAATCATCAATTTCATTTACCCTGATGAGGAGAATGTGTTTGGAGTGCCTAATCACAAAATAAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * * * * * * * * * *
94354 GAATAAT-GTTTCTAGAATGCTTGTTTGACTTATTTGAGGAACGAACTTAGACTTTTTCAAGATT
260 GAA-GATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* *
94418 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCATAATGAGAAAACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* ** *
94483 TG-TTATGGTGCCT-ATTCTAGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTT
389 TGTTTATGGTGCCTAATCCT-GAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
*
94546 AAGAGAG-AAACTTTGATTATAAT-
453 AAGAG-GCAAACTTTGATTCT-ATC
* * * * * *
94569 AAAATTGGTTGAAAGAAAAGCTTTTATTGCGACACTAAAGCATCAATGTCTTGTATCCTAAAGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * *
94634 TGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGACAATCAATGCTTGCC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * *
94699 TTATTTAAAGGATGAACATTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* ** * *
94764 AAATCATCAATATCATTTATCCTGATGAGGAGAATGTGTTTGGAGTGCCTAATCATAAAATAAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* ** * * * * * * *
94829 GAATATTGTTTCTAGAATGCTTGTTTGACTTATTTGTGGCACGAACATAGACTTT-TCAAAAATT
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAATT
* * * * *
94893 GGTGGGAAGAAAGCCTTTCTTACGAAACCAAAACATCAATAGCATCTATCCTGATGAGAAGACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* ** * * * * *
94958 TG-TTAT-GTCGCCT-ATTCTAGAAAAGAATGGGGACTAGTATGATTATTCAAGTTTGTCTGAGT
389 TGTTTATGGT-GCCTAATCCT-GAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATT
*
95020 TAAG-GGACAAACTTTGATTCTAAC
452 TAAGAGG-CAAACTTTGATTCTATC
* ** * * * * * *
95044 AGAAACAGTTGAAAGAAAAGCTTTTCTTGCAATACCAAAGCATCTATGTCTTGTATCCTAAAGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
** * * * * * * * * *
95109 GGAATGCCTTTTTGGTTCCCACTCTTGAAAGGAATGGAAACTATTATGAGAATCGATGTTTGTC-
66 GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCT
* * * * *
95173 AAGTTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGTAAAGAAAAGATTTCCATGCAAAACA
131 TA-TTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * * * * *
95238 AAATCATCAGTATCATTTATCCTAATGACGAAAATGTGTTTATTGTGTCTAATCACAAAAGGAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* ** * *
95303 GAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCATAAACTTAGACTTTTTAGAAATTG
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTG
* * **
95368 GTGGGGAGAAAGCCTTTCTTGC-ATAACCAAAGCATCAATATCATCTATCAAAATGAGAAGACTA
325 GTGGGAAGAAAGCCTTTCTTGCGA-AACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
** *
95432 TGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTA
389 TGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTA
** *
95497 AGAGATAAACTTTGATTCTAAC
454 AGAGGCAAACTTTGATTCTATC
* * * * ** * * *
95519 AAAAACGGTTGAAAGAAAAGCTTTTCTTGCAACACCAACGCATCAACATCTTGTTTCCTAAAGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
** * * **
95584 GGGAATGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACTTGAATCAATGCTTGCC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * *
95649 TTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCAAGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * ** * *
95714 AAATCATCAATTTCATTTATCCTGATGAGGAGAATGTGTTTGGAGTGCCTAATCCCAAAATAAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * * * * * * *
95779 GAATATCATTTCTAGAATGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTT-TCCAAGATT
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAATT
* * * *
95843 GGTCGGAAGAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTCTATCATAATGAGAAAACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* ** * *
95908 TG-TTATGGTGCCT-ATTCTAGAAAAGAATGGGGATTAGTATGACTATTTAAGTTTGTCTTATTT
389 TGTTTATGGTGCCTAATCCT-GAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
* * * *
95971 AAAAGACAAACTTTGATTATAAC
453 AAGAGGCAAACTTTGATTCTATC
* * * * *
95994 AAAAATAGTTGAAAGAAAAGCTTTTATTGCGACACCAAAGCATCAATGTCTTGTATCCTAAAGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * *
96059 GGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTATGACAATCAATGCTTGCC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * *
96124 TTATTTAAAGGATGAACATTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* ** *
96189 AAATCATCAATATCATTTATCCTGATGAGGAGAATGTGTTTGGAGTGCCTAATCACAAAATAAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* ** * * * * * *
96254 GAATATTGTTTCTAGAATGCTTGTTTGACTTATTTGAGGCACGAACATAGACTTT-TCAAAAATT
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAATT
* *
96318 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCATAATGAGAAGACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* ** * *
96383 TG-TTATGGTGCCT-ATTCTAGAAAAGAATGGGGATTAGTATGA-TCATTCAAGTTTGTCTGATT
389 TGTTTATGGTGCCTAATCCT-GAAAAGAATTAGGATTAGTATGACT-ATTCATGTTTGTCTTATT
*
96445 TAAGAGACAAACTTTGATTCTAAT-
452 TAAGAGGCAAACTTTGATTCT-ATC
* * * *
96469 AAAAATGTTTGAAAGAAAAGTTTTTATTGCGACACCAAAGCATCAATGTCCATGTATCCTAATGA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGT-CATGTATCCTAATGA
* * * * ** * *
96534 AGGGAATGTGTTTTTGGTTCCCAATCTTGAAAGGAATGGAGATTGTTATGAGAATTGATTCTTGT
65 A-GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * * *
96599 CATATTTAAGGGATAAATTTTGATTTTAAGGAAAATAGGGGAAAGAAAAGATTTCCATGCAAAAA
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGC--AAA
* * * * * * * * *
96664 AAAAAATCTTCAGTATCATTTTTCCTAATGAGGAAAATGTGTTTATTGTGTCTATTCACAAAAGG
192 ATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
** * * *
96729 AATGAAGATTTTTGCTAGAATCCATGTTTGTCTCATTTGAGGTAGGAACTTAGACTTT-TCAAAA
257 AATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAA
* * *
96793 ATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGAGAAGA
321 ATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGA
** * *
96858 CTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTTATGTTTATCTTAT
386 CTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTAT
** *
96923 TTAAGAGAAAAACTTTGATTCTAAC
451 TTAAGAGGCAAACTTTGATTCTATC
* * * * * * *
96948 AAAAACGGTTGAAGGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGAATTCTAATCAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * *
97013 GGGAATGTGTTTTTGGCT-CCCAATCTTGAAAAGAATGGAGACTATTACTAGAATCAATGCTCGC
66 -GGAATGTGTTTTTGG-TACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * *
97077 CTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCAAGCAAAAG
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* *
97142 AAAATCATCAATATCATTTATCCTATTAAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * * * *
97207 TGAAGATCATTTCTAGAATGCTTGTTTGACTTATTTGAGGCACGAACTTGGACTTT-TCAAAAAA
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAT-AAAAAT
* * *
97271 TGGTGGGAAGAAAGCATTTCTTACGAAACCAAAGCATCAATATCGTCTACCCTAATGAGAAGACT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* * ** * *
97336 ATG-TTATGGTGCCT-ATTCTAGTAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTGATT
388 ATGTTTATGGTGCCTAATCCT-GAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATT
* * * *
97399 TAAGAGACAAACATTGATTCCAAC
452 TAAGAGGCAAACTTTGATTCTATC
* * * * *
97423 AAAAACGGTTGAAAGAAAAGCTTTTATTGTGACACCAAAGCATCAATGTCATGCATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
** * * * * * * * *
97488 CAAAATGTGTTTTTGGTTCCCAATCTGGAAAGGAATGGAGATTGTTATGAGAATCGATTCTTGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * *
97553 ATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* * * * *
97618 ACATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGT-GTGTCTAATCACAAAAAGAA
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAATGAA
* * * ** *
97682 TAAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCTCGAACTTAGACTTTCCAGAAATT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* * * * * * *
97747 AGTAGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATGTTGCCTATCCTAATGAGAAGACAA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
**
97812 TGTTTATGGTGCCTAAT-CTGGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTT
389 TGTTTATGGTGCCTAATCCT-GAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
* *
97876 AAGAGACAAACTTTGATTCTAAC
453 AAGAGGCAAACTTTGATTCTATC
* * * * * **
97899 AAAAACGGTTGAAACAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCTTGTATCCTAAAAAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
** * * * *
97964 GGGAATGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGATCCGACAATCAATGCTTGCC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * *
98029 TTATTTAAAGGATGAACTTTGATTTTATGGAAAATAGGGCAAAGAAAATATTTTCATGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
* *
98094 AAATCATCAATATCATTTATCCTAATGAAGAAAATGTGTTTATAGTGCCTAATCACAAAATGAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * * *
98159 GAAGATCATTTCTAGAATGCTTGTTTGACAT-ATTTGAGGCACGAACTTAGACTTT-TCAAAAAT
260 GAAGATCATTACTAGAATCCATGTTTGTC-TCATTTGAGGCACGAACTTAGACTTTAT-AAAAAT
*
98222 TGGTGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* * * * ** **
98287 ATG-TTATGGTGCCT-ATTCTAGAAAAGAA-TGGGA--AGAATG--T-TT--TG-GTACCCAATC
388 ATGTTTATGGTGCCTAATCCT-GAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTAT-
* * *
98341 TTGAAAAGAATGG-AGACTGTTACGAGAGTCAATGC
451 TT---AAG-A-GGCAAACT-TT----GATTCTAT-C
* *** ** * * * * * ** * *
98376 TTACCTTACT-TAAGGGATGAA-CTTTAATTTTAAG-GA-A-TATAAGGCA--AA-GAAAAGATT
1 -AAAAATGGTGGAA-AGA-AAAGCTTT--TCTT--GCGACACCA-AA-GCATCAATGTCATG-TA
* ** * * * ***
98433 TCC--ATGCAAAAGAAAATCATTAATATCAT-TTATCCTAATGAGGAGAATGTGTTTATTGTGCC
56 TCCTAATG--AAGGAATGT-GTT--T-T--TGGTA-CCCAATCTTGA-AA-------A----G--
* * * * * * * * *
98495 TAATCATGAAATGAATGAAGATCATTACTAGAATCCATG-TTGGACTCATTTGAGGCACGAACTT
98 --A--ATG-GA-GACTG-------TTACGAGAATCAATGCTT-GCCTTATTTAAGGGATGAACTT
* * ** * * * * * * * ** *
98559 AGA-CTTAACAAAAATTGGAAG-GAAGAAAGCCTTTCC-TACAAAATCAAAGCATCAATATTGTC
149 TGATTTTAAGGAAAATAGG--GCAAAGAAAACATTTCCATGCAAAATAAAATCATCAATATCATT
* * * * * * * **
98621 TATCCTAATGAGAAGACTATGTTTATGGTGCCTAATC-CTGGAAA-GACT-AGGGATTGTTA-T-
212 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC--AAAATGAATGA-AGATCATTACTA
* * * **
98681 GACTATTCATGTTTGTCAT-ATTTAAGAGAGCA--AACTTTGA-TTCTATCAAAAA-CGGTGAAA
274 GA--ATCCATGTTTGTC-TCATTT--GAG-GCACGAACTTAGACTT-TAT-AAAAATTGGTG-GG
* * ** * * * * * * *
98741 AAAAAAGCTTTTCTTGCGACTCCAAAACATCAATGTCATGTATCATAATGCAGAAAAC-GTGTTC
330 AAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATG-AGAAGACTATGTT-
* * * * * * * * *
98805 T-TGGTTCCCAATCTTGAAAAGAA-TGGAGACT-GT-T-ACAAGAATCGATGCTTGTCATATTTA
393 TATGGTGCCTAATCCTGAAAAGAATTAG-GATTAGTATGAC--TATTC-ATGTTTGTCTTATTTA
* * **
98865 AG-GG-ATTAATTTTGATTTTAAG
454 AGAGGCA--AACTTTGATTCTATC
* * * * * ** *** * * *
98887 GAAAATAGG-GCAAAGAAAAGATTTTCATGC-AAAGGAAAATTGTCAATATCATTTATCCTTATG
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGACA-CCAAAGCATCAATGTCATGTATCCTAATG
* * * * ** * * * *
98950 AGGAGAATGTGTTTATGGTGCCTAATC-ACAAAATGAATGAAGA-TCATTACTAGAATGC-ATGT
64 AAG-GAATGTGTTTTTGGTACCCAATCTTGAAAA-GAATGGAGACT-GTTACGAGAAT-CAATGC
* * * * * * * * ** * ***
99012 TTGAAC-T-TTTGAGGCACGAACTTAGACTTTCCAA--AAATTGGGGGGAAGAAAGC-TTTTTTT
125 TTG-CCTTATTTAAGGGATGAACTTTGA-TTT-TAAGGAAAATAGGGCAAAGAAAACATTTCCAT
* * ** * * * * * * * * * * ** **
99072 GCGACACCAAAGCATTAACATCATGTATCCTTATGAGAAGACTATATTTTTCTTGCCTAATTCTG
187 GCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA-TCAC
** * * * * * * ** *
99137 AAAAT-AATGGGGATTAGTA-T-GACTATTCATGTTTGTCTTATTTAAGACATAAACTTTGA-TT
251 AAAATGAATGAAGATCATTACTAGA--ATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTT
* * * * * * * * *
99198 CTATCAAAAA-TGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAGGCATCAATGTCATGTACCCT
314 -TAT-AAAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCT
* * * * * * ** * * * * *
99262 AATGA-AAGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAAAGAAGACTA-TTTAGA-GAATCAA
376 AATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTAT-GACTATTC-A
* * * *** * **
99324 TGCTTGCCTTATTTAAGTGATGAACTTTGATTTTAAG
439 TGTTTGTCTTATTTAAGAGGCAAACTTTGATTCTATC
* * * ** * * * ** * * * *
99361 GAAAATAGG-GCAAAGGAAATATTTTCATGCAAAAGAAAATCATCAATATCATTTACCCTAATGA
1 AAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * * * * *** * * * * **
99425 GGAGAATGTGTTTATCGTGCCTAA-CCACAAAATGAATGAAGATCAT-TT-CTAAAATCTATATT
65 AG-GAATGTGTTTTTGGTACCCAATCTTGAAAA-GAATGGAGA-C-TGTTACGAGAATCAATGCT
** * * * * * * ** * * *
99487 TATCTCATTTGAGGCACGAACTTAT-ATATTATA--AAAATTGGTGTGAAGAAAGCCTTT-CTTG
126 TGCCTTATTTAAGGGATGAACTT-TGATTTTA-AGGAAAATAGG-GCAAAGAAAACATTTCCATG
** * * * * ** * * *
99548 CGAAACCAAAGT-ATCAATATCATGTATCCTTATGA-GAGGACTAAGCTTATGGTGCCTAGTC-C
188 C-AAAATAAAATCATCAATATCATTTATCCTAATGAGGA-GAATGTGTTTATAGTGCCTAATCAC
* * * * * ** * * *
99610 TGAAAA-G-ATTACGGATTAGTACGACTATTCATGTTTGTCTTATTTTGGAGGCA--AACTTTGA
251 --AAAATGAATGA-AGATCATTACTAGAATCCATGTTTGTCTCA-TTT-GAGGCACGAACTTAGA
* * * * * * * * *
99671 -TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCATGTAT
311 CTT-TAT-AAAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTAT
* * * * * * * *
99734 CCTAATGA-AGGAAT-TGTATTCTTGGTTCCT-ATTCTCGAAAAGAA-TGGAGACT-GTTACGA-
373 CCTAATGAGAAGACTATGT-TT-ATGGTGCCTAATCCT-GAAAAGAATTAG-GATTAG-TATGAC
* * * ** * * **
99793 GAATCGGA-GCTTGTCAAATTTAA-AGG-ATGAATTTTGATTTTAGG
433 TATTC--ATGTTTGTCTTATTTAAGAGGCA--AACTTTGATTCTATC
* * ** * **** ** * * ** *** *
99837 GAAAATAAG-GCCAAGAAAAAGAATGGGGATTAGTAAGA-CTATTCATGTTTGTC-T-TAT-TTA
1 AAAAAT-GGTGGAAAG-AAAAG-CT-TTTCTT-GCGACACCAAAGCATCAATGTCATGTATCCTA
** * * * * ** * * * *
99897 A-GAGATAAACTTTGATTCT--AACAAAAACGGTTG-AAAGAA--AAG-CT-TTTCTTGCGACAT
61 ATGA-AGGAA-TGTGTTTTTGGTACCCAATC--TTGAAAAGAATGGAGACTGTTAC--GAGA-AT
* * * * *
99954 CAAAGCATTAATGTCATATATCCTAAGGAAGGGAATGTATTCTTGGATCCCAATTCTAA--AACG
119 CAATGC--T--TG-CCT-TAT--T---TAAGGG-ATG-A-ACTTTGAT-----TT-TAAGGAA--
** * * * * * *** * * * **
100017 AATAGAGACTGTTACGAGAATCGATGTT---TGTCATATTTAAGGGATGAATTTTGATTTTAAGG
162 AATAG-G---GCAAAGA-AAAC-AT-TTCCATG-CAAAATAAAATCATCAA-TATCA-TTT-ATC
** * ** * ** * * * *
100079 AAAATAAGGCAAGGAAAATATTTCCA-TG-C-AA-AAGAAAAT-AATAAATATCATTTATCCTAA
216 CTAATGAGG--A-GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCA-TTA--CT-A
*** * ** * ** * * * ****
100139 TGAAGAGAATTGCGTAATCACAAAATGAATG-AAGATCATTACTAGAATCCATGTT-TGTCTCAT
274 -GAA-TCCA-TG-TTTGTCTC-ATTTG-AGGCACGA--ACT--TAG-A--C-T-TTAT-AAAAAT
* * * * * * * * *
100202 TTGAGGCACGACCATAGACATTATAAAAATTTGTGGGAA-GAAAGCCTTTTTTTGCAAAAGCAAA
323 TGGTGGGAAGA--A-AG-CCTT-T-----CTTG-CGAAACCAAA----------------GC--A
* * * * **
100266 GCTTCAATATTGTGTATCCTTATGGGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGG
359 ---TCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATTAG
* * * * * *
100331 GAATAATTTGACTATTCATGTTTGTCTTATTTAACAGACAAACTTTGATTCTATA
421 GATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGGCAAACTTTGATTCTATC
* * * * *
100386 AAAAATAGTTGAATGAAAAGGC-TTTCTTGCGACACCAAAGCATCAATGTCAAGTATCCTAACGA
1 AAAAATGGTGGAAAGAAAA-GCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
* * * * * * * *
100450 AGGGAATGTATTCTTGGTTCCCAATCTTGAAAAGAATGGAAACTGTTATGAGAAT-GATGTTTGT
65 A-GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * * * * * * *
100514 CATATTTAAGGGATAAATTTTGATTTTAAGGAAGATAGGGCAAAGTAGAGATTTTCATGCAAAA-
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* * * *
100578 AAAATCATCAATATCATTTATCTTAATAAGGAGACTGTGTTTATTGTGCCTAATCACAAAATGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * *
100643 TGAAGATCATTACTAGAATCCATGTTTGACTCATTTGAGGCGCGAACTTAGACATTACAAAAATT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATT
* * * * * * *
100708 GGTGGGAATAAAGCCTTTCTTGTGAAACAAAAGCATCAATATCATGTACCCTTATGAGAAGACTA
324 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTA
* * ** *
100773 TGTTTACGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTATTAATGTTTGTCTTATTTA
389 TGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTA
* * *
100838 AAAGACAAACTTTGATTCTAAC
454 AGAGGCAAACTTTGATTCTATC
* * *
100860 AAAAACGGTAGAAAGAAAAGCTTTTTTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * *
100925 GGGAATGTGTTTTTGGTTCCCAATCTTGAAAGGAATGGAGACTGTTATGAGAATCGATGCTTGTC
66 -GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * *
100990 ATATTTAAGGGATGAA-TCTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAATAG
130 TTATTTAAGGGATGAACT-TTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* * * *
101054 AAAATCACCAATATCATTTAT-CTGAATGAGGAGAATGTGTTTATTGTGTCTAATCACAAAAGGA
194 AAAATCATCAATATCATTTATCCT-AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * ** * * **
101118 ATGAAGATCATTACTAGAATCCATGTTGGACTTTTTTGAGGCAAGAACATAGACTTTACGAAAAT
258 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAAT
* * * * *
101183 TGGAGGGAGGAAAGCCTTTCCTGTGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAGGACT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* **** * ** * *
101248 ATATTTATGGTGCCTAATAGAAAAAAAAATGGGGATTACTATGACTATTCATGTTTATCTTATTT
388 ATGTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTT
* *
101313 ATGAGACAAACTTTGATTCTATC
453 AAGAGGCAAACTTTGATTCTATC
* ** * * * *
101336 AAAAACGGTGGAAAGAATGGCTTTTCTTGCAATC-CCAAAGCATCAGTGTCACGTATCCTAATAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGA-CACCAAAGCATCAATGTCATGTATCCTAATGA
* * * * **
101400 AGGGAATATGTTTTTGGTTCCCAATCTTGAAAAAAAATGGAGACTGTTGCGAGAATCTGTGCTTG
65 A-GGAATGTGTTTTTGGTACCCAATCTTG-AAAAGAATGGAGACTGTTACGAGAATCAATGCTTG
* * *
101465 CCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAAGGCAAAAAAAAGATTTCCATGCAAAA
128 CCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAA
* * ** *
101530 GAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGTTTAATCACAAAAGGA
193 TAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * * *
101595 ATGAAGATCATTACTAGAATCCATGTTGGACTCATTTGAGGCACAAACTTAGACTTTACAAAAAT
258 ATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAAT
* * * * * * *
101660 AGAG-AGGAAGAAAGCCTTTCATTGCGAAGCCAAAGCATTAGTATCATCTATCCTAATGAAAAGA
323 TG-GTGGGAAGAAAGCCTTTC-TTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGA
* * * * *
101724 CTATGTTTATAGTGCCTAACCCAGAAAAG-ACTAGGGATT-GTTATGACTATTCATGTTTATCTT
386 CTATGTTTATGGTGCCTAATCCTGAAAAGAATTA-GGATTAG-TATGACTATTCATGTTTGTCTT
*
101787 ATTTAAGAGGGCAAACTTTGTTTCTATC
449 ATTTAAGA-GGCAAACTTTGATTCTATC
* * *
101815 AAAAACGGT-GAAAAAAAAGCTTTTCTTGCGACACC-AAGCATCAATGTCATCTATCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * *
101878 GAGAATGTG-TTTTGGTTCCTAATCTTGAAAAGAATGGAGACTATTACGAGAATCGATACTTGTC
66 G-GAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * * * * *
101942 ATA-TTAAGGGATTAATTTTGATTTT-TGGAAAATAGGGCAAAGAAAAGATTTTCGTGCAAAAGA
130 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATA
** * *
102005 AAATTGTCAATATCATTTATCCTAATGTGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAAT
195 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * * *
102070 AAAGATCATTACGAGAATGCATGTTTG--AC-TTT----------C-----C-----AAAAATTG
260 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTG
* * * * * ** * * *
102112 GTAGGAAGAAAGCTTTTTTTGCGACACCAAAGTATCAGCATCATGTATCCTTATGAGAAGACTAT
325 GTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTAT
* * * * ** *
102177 GTTTTTTGTGCCTACTCCTGAAAATAATGGGGATTAGTATGACTATTTAT-TGTTGTCTTATTTA
390 GTTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGT-TTGTCTTATTTA
**
102241 AGACACAAACTTTGATTCTATC
454 AGAGGCAAACTTTGATTCTATC
* *
102263 AAAAATGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTACCCTAATGAA
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATG-A
* * * * * *
102328 AGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAAAGGAAACTATTTA-GAGAATCAACGTTTGC
65 AGGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACT-GTTACGAGAATCAATGCTTGC
* * * * *
102392 CTTATTTAAGTGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAATATTTCCATGTAAAAG
129 CTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAAT
* * *
102457 AAAATCATCAATATCATTTACCCTAATAAGGAGAATGTGTTTATCGTGCCTAATCACAAAATGAA
194 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* *** * * *
102522 TGAAGATCATTTCTAGAAAATATATTTATCTCATTTGAGGCATGAACTTAGA-TATTATAAAAAT
259 TGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACT-TTATAAAAAT
* * * * *
102586 TGGTGGGAAGAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAGGACT
323 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACT
* * *
102651 AAGCTTATGGTGCCTAATACTGAAAAG-ATTAGGGATTAGTATGACTATTCATGTTTGTCTTATT
388 ATGTTTATGGTGCCTAATCCTGAAAAGAATTA-GGATTAGTATGACTATTCATGTTTGTCTTATT
* * *
102715 TAGGAGACAAACTTTGATTCTGTC
452 TAAGAGGCAAACTTTGATTCTATC
* * *
102739 AAAAACGGTTGAAAGAAAAGCTTTTCTTGCAACACCAAAG
1 AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAG
102779 TGAAAGCTCA
Statistics
Matches: 32461, Mismatches: 6299, Indels: 4579
0.75 0.15 0.11
Matches are distributed among these distances:
445 1 0.00
446 7 0.00
447 31 0.00
448 26 0.00
449 115 0.00
450 55 0.00
451 50 0.00
452 28 0.00
453 129 0.00
454 5 0.00
455 14 0.00
456 31 0.00
457 7 0.00
458 9 0.00
459 6 0.00
460 9 0.00
461 4 0.00
462 101 0.00
463 295 0.01
464 5 0.00
465 4 0.00
466 9 0.00
467 55 0.00
468 72 0.00
469 32 0.00
470 31 0.00
471 79 0.00
472 773 0.02
473 909 0.03
474 2785 0.09
475 7544 0.23
476 9929 0.31
477 2509 0.08
478 1705 0.05
479 691 0.02
480 66 0.00
481 40 0.00
482 53 0.00
483 189 0.01
484 107 0.00
485 40 0.00
486 42 0.00
487 30 0.00
488 61 0.00
489 24 0.00
490 23 0.00
491 39 0.00
492 118 0.00
493 25 0.00
494 43 0.00
495 60 0.00
496 43 0.00
497 97 0.00
498 59 0.00
499 48 0.00
500 60 0.00
501 90 0.00
502 61 0.00
503 67 0.00
504 99 0.00
505 93 0.00
506 55 0.00
507 53 0.00
508 65 0.00
509 80 0.00
510 152 0.00
511 96 0.00
512 102 0.00
513 97 0.00
514 113 0.00
515 55 0.00
516 53 0.00
517 55 0.00
518 77 0.00
519 83 0.00
520 107 0.00
521 98 0.00
522 68 0.00
523 53 0.00
524 44 0.00
525 38 0.00
526 58 0.00
527 20 0.00
528 35 0.00
529 30 0.00
530 28 0.00
531 45 0.00
532 40 0.00
533 15 0.00
534 26 0.00
535 21 0.00
536 22 0.00
537 14 0.00
538 32 0.00
539 21 0.00
540 15 0.00
541 11 0.00
542 9 0.00
543 6 0.00
544 19 0.00
545 23 0.00
546 23 0.00
547 12 0.00
548 38 0.00
549 94 0.00
550 42 0.00
551 28 0.00
552 21 0.00
553 45 0.00
554 36 0.00
555 28 0.00
556 17 0.00
557 11 0.00
558 7 0.00
559 19 0.00
560 72 0.00
561 37 0.00
562 7 0.00
563 1 0.00
564 4 0.00
565 2 0.00
566 4 0.00
567 5 0.00
568 2 0.00
569 4 0.00
570 4 0.00
571 3 0.00
572 5 0.00
573 5 0.00
574 4 0.00
575 2 0.00
576 3 0.00
578 1 0.00
580 4 0.00
581 9 0.00
582 3 0.00
583 8 0.00
584 6 0.00
585 10 0.00
586 19 0.00
587 3 0.00
588 6 0.00
589 17 0.00
590 5 0.00
591 2 0.00
592 1 0.00
595 8 0.00
596 7 0.00
597 1 0.00
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (475 bp):
AAAAATGGTGGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
GGAATGTGTTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCT
TATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCATGCAAAATAA
AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTATAAAAATTGG
TGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATG
TTTATGGTGCCTAATCCTGAAAAGAATTAGGATTAGTATGACTATTCATGTTTGTCTTATTTAAG
AGGCAAACTTTGATTCTATC
Found at i:67328 original size:319 final size:318
Alignment explanation
Indices: 66929--67583 Score: 956
Period size: 319 Copynumber: 2.1 Consensus size: 318
66919 AACCAAACAA
* * *
66929 CAATATCATCTATCCTAATGAGAAGACTCTATTACGGTGCCTAATCCTGAAAAGAATGGGGATTA
1 CAATATCATTTATCCTAACGAGAAGACTCTATTACGGGGCCTAATCCTGAAAAGAATGGGGATTA
*
66994 GTATGACTATTCAAGTTTGACTTAGTTAAGAGAGCAAACTTCGATTCTATCAAAAACGGTGGAAA
66 GTATGACTATTCAAGTTTGACTTAGTTAAAAGAGCAAACTTCGATTCTATCAAAAACGGTGGAAA
* *
67059 GAAAAGATTTTCTTCCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATCTGTTCTT
131 GAAAAGATTTTCTTCCGACACCAAAGCATCAATGTCATGTATCCTAAAGAAAGGAATCTGTTCTT
** * * * * * * *
67124 GGTTCTTAATCTTGAAAATAATGGAGACTATTATGAGAATTGATGCTGGTCATATTTAAG-GGAT
196 GGTTCCCAATCTTGAAAAGAATAGAGACTATTACGAGAATCGAGGCTGGCCATACTTAAGTGG-T
* * *
67188 GAATTTTGATTTTGAGGAAAATTGGGTAAAGAAAAGATTTCCATGCAAA-AAAAATTCAT
260 GAATTTTGACTTTAAGGAAAATAGGGTAAAGAAAAGATTTCCATGCAAATAAAAA-TCAT
* *
67247 CAATATCATTTATCCTAACGAGAAGACTAC-ATTTATGGGGCCTAATCCTGAAAAGAGTGGGGAT
1 CAATATCATTTATCCTAACGAGAAGACT-CTA-TTACGGGGCCTAATCCTGAAAAGAATGGGGAT
* * * * *
67311 TAGTATGACTGTTCAAGTTTGACTTATTTAAAAGAGCAAACTTTGATTCTATCAAAAACGGTTGT
64 TAGTATGACTATTCAAGTTTGACTTAGTTAAAAGAGCAAACTTCGATTCTATCAAAAACGGTGGA
* ** *
67376 AAGAAAAGTTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAAAGAAAGGAATGTGTTC
129 AAGAAAAGATTTTCTTCCGACACCAAAGCATCAATGTCATGTATCCTAAAGAAAGGAATCTGTTC
*
67441 TTGGTTCCCAATCTTGAAAAGAATAGAGACTATTACGAGAATCGAGGCTTGCCATACTTAAGTGG
194 TTGGTTCCCAATCTTGAAAAGAATAGAGACTATTACGAGAATCGAGGCTGGCCATACTTAAGTGG
* *
67506 TGAATTTTGACTTTAAGGAAAATAGGGTAAAGAAAGGATTTCCATGCAAATGAAAATCAT
259 TGAATTTTGACTTTAAGGAAAATAGGGTAAAGAAAAGATTTCCATGCAAATAAAAATCAT
*
67566 TAATATCATTTATCCTAA
1 CAATATCATTTATCCTAA
67584 TGAGGAGAAG
Statistics
Matches: 300, Mismatches: 33, Indels: 7
0.88 0.10 0.02
Matches are distributed among these distances:
318 27 0.09
319 267 0.89
320 6 0.02
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (318 bp):
CAATATCATTTATCCTAACGAGAAGACTCTATTACGGGGCCTAATCCTGAAAAGAATGGGGATTA
GTATGACTATTCAAGTTTGACTTAGTTAAAAGAGCAAACTTCGATTCTATCAAAAACGGTGGAAA
GAAAAGATTTTCTTCCGACACCAAAGCATCAATGTCATGTATCCTAAAGAAAGGAATCTGTTCTT
GGTTCCCAATCTTGAAAAGAATAGAGACTATTACGAGAATCGAGGCTGGCCATACTTAAGTGGTG
AATTTTGACTTTAAGGAAAATAGGGTAAAGAAAAGATTTCCATGCAAATAAAAATCAT
Found at i:67423 original size:160 final size:158
Alignment explanation
Indices: 66909--67424 Score: 443
Period size: 159 Copynumber: 3.2 Consensus size: 158
66899 GAAGAAAGCC
* * *
66909 TTTCTTGCGAAACCAAA-CAACAATATCATCTATCCTAATGAGAAGACTCTATTACGGTGCCTAA
1 TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTCTATTATGGTGCCTAA
* *
66973 TCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTAGTTAAGAGAGCAAACTTCGA
66 TCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGAGCAAACTTTGA
*
67038 TTCTATCAAAAACGGTGGAAAGAAAAGAT
131 TTCTATCAAAAACGGT-GTAAGAAAAGAT
* * * * * * * * *
67067 TTTCTTCCGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATCTGTTCTTGGTTCTT
1 TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGACTCTATT-ATGGTGCCT
* * * * * ** * * * * * * * *
67131 AATCTTGAAAATAATGGAGACTATTATGAGAATTGATGCTGGTCATATTTAAGGGATG--AATTT
64 AATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-GCAAACTT
* ** **
67194 TGATTTTGAGGAAAATTGG-GTAAAGAAAAGAT
128 TGATTCT-ATCAAAAACGGTGT-AAGAAAAGAT
* * ** * * * *
67226 TTCCATGC-AAAAAAAATTCATCAATATCATTTATCCTAACGAGAAGACTAC-ATTTATGGGGCC
1 TTTCTTGCGAAACCAAA-GCATCAATATCATGTATCCTAATGAGAAGACT-CTA-TTATGGTGCC
* * *
67289 TAATCCTGAAAAGAGTGGGGATTAGTATGACTGTTCAAGTTTGACTTATTTAAAAGAGCAAACTT
63 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGAGCAAACTT
*
67354 TGATTCTATCAAAAACGGTTGTAAGAAAAGTT
128 TGATTCTATCAAAAACGG-TGTAAGAAAAGAT
* * *
67386 TTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAA
1 TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAA
67425 AGAAAGGAAT
Statistics
Matches: 258, Mismatches: 85, Indels: 28
0.70 0.23 0.08
Matches are distributed among these distances:
158 23 0.09
159 127 0.49
160 100 0.39
161 8 0.03
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.31
Consensus pattern (158 bp):
TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGACTCTATTATGGTGCCTAA
TCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGAGCAAACTTTGA
TTCTATCAAAAACGGTGTAAGAAAAGAT
Found at i:67461 original size:160 final size:158
Alignment explanation
Indices: 66968--67464 Score: 419
Period size: 160 Copynumber: 3.1 Consensus size: 158
66958 TATTACGGTG
*
66968 CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTAGTTAAGAGAGCAAAC
1 CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGAGCAAAC
* * *
67033 TTCGATTCTATCAAAAACGGTGGAAAGAAAAGATTTTCTTCCGACACCAAAGCATCAATGTCATG
66 TTTGATTCTATCAAAAACGGT-GTAAGAAAAGATTTTCTT-GGACACCAAAGCATCAATGTCATG
* * *
67098 TATCCTAATGAAGGGAATCTGTTCTTGGTT
129 TATCCTAAAGAAAGGAATATGTTCTTGGTT
* * * * * * ** * * * * * * *
67128 CTTAATCTTGAAAATAATGGAGACTATTATGAGAATTGATGCTGGTCATATTTAAGGGATG--AA
1 CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGA-GCAAA
* * ** ** * * * * ** * *
67191 TTTTGATTTTGAGGAAAATTGG-GTAAAGAAAAGATTTCCATGCAAAAAAAATTCATCAATATCA
65 CTTTGATTCT-ATCAAAAACGGTGT-AAGAAAAGATTTTCTTGGACACCAAA-GCATCAATGTCA
* * * ** **
67255 TTTATCCTAACGAGAA-GACTACATT-TATGGGG
127 TGTATCCTAAAGA-AAGGAATATGTTCT-TGGTT
* * *
67287 CCTAATCCTGAAAAGAGTGGGGATTAGTATGACTGTTCAAGTTTGACTTATTTAAAAGAGCAAAC
1 CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGAGCAAAC
*
67352 TTTGATTCTATCAAAAACGGTTGTAAGAAAAGTTTTTCTTGTGACACCAAAGCATCAATGTCATG
66 TTTGATTCTATCAAAAACGG-TGTAAGAAAAGATTTTCTTG-GACACCAAAGCATCAATGTCATG
*
67417 TATCCTAAAGAAAGGAATGTGTTCTTGGTT
129 TATCCTAAAGAAAGGAATATGTTCTTGGTT
* *
67447 CCCAATCTTGAAAAGAAT
1 CCTAATCCTGAAAAGAAT
67465 AGAGACTATT
Statistics
Matches: 238, Mismatches: 86, Indels: 26
0.68 0.25 0.07
Matches are distributed among these distances:
158 8 0.03
159 102 0.43
160 119 0.50
161 9 0.04
ACGTcount: A:0.36, C:0.14, G:0.20, T:0.31
Consensus pattern (158 bp):
CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTTAAGAGAGCAAAC
TTTGATTCTATCAAAAACGGTGTAAGAAAAGATTTTCTTGGACACCAAAGCATCAATGTCATGTA
TCCTAAAGAAAGGAATATGTTCTTGGTT
Found at i:70079 original size:160 final size:158
Alignment explanation
Indices: 69594--70092 Score: 407
Period size: 160 Copynumber: 3.1 Consensus size: 158
69584 GTTTACGGTG
* *
69594 CCTAATCCTGAAAAGAATGGGGATTACTATGACTATTCATGTTTGACTTAGTTAAGAGAGCAAAC
1 CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGACTT-TTTAAGAGAGCAAAC
* * *
69659 TTTGATTCTATCAACAACGGTGAAAAGAAAAGATTTTCTTTTGACACCAAAGCATCAATGTCATG
65 TTTGA-TCTATCAAAAATGGTGAAAAGAAAAGATTTTCTTGTGACACCAAAGCATCAATGTCATG
* *
69724 TATCCTAATGAAGGGAATGTGTTCTTGGTT
129 TTTCCTAATGAAGGAAATGTGTTCTTGGTT
* * * * * * * * *
69754 -CTCAATCTTGAAAATAATGGAGA-CAGTTATGA-GAATCGATGCTGGTT-A-TATTTATGGGAT
1 CCT-AATCCTGAAAAGAATGGGGATTAG-TATGACTATTC-ATG-T--TTGACTTTTTAAGAGA-
* * * * * * ** *
69814 GC--ATTTTGAT-T-TCAAGGAAACTAGG-GCAAAGAAAAGATTTCCATG-CAAAAGAAATTCAT
59 GCAAACTTTGATCTATCAA--AAA-T-GGTGAAAAGAAAAGATTTTCTTGTGACACCAAA-GCAT
* ** *
69873 CAATATCAT-TTATCCTAATG-A-GAAGACTACGTT-TATGGTG
119 CAATGTCATGTT-TCCTAATGAAGGAA-A-TGTGTTCT-TGGTT
*
69913 CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTTTTGAAGAGAGCAAAC
1 CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGACTTTTT-AAGAGAGCAAAC
** *
69978 TTTGACTCTATCAAAAATGGTGGTAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATG
65 TTTGA-TCTATCAAAAATGGTGAAAAGAAAAGATTTTCTTGTGACACCAAAGCATCAATGTCATG
70043 TTTCCTAATGAAGGAAATGTGTTCTTGGTT
129 TTTCCTAATGAAGGAAATGTGTTCTTGGTT
*
70073 CCTAATCATGAAAAGAATGG
1 CCTAATCCTGAAAAGAATGG
70093 AGACTATTAT
Statistics
Matches: 251, Mismatches: 55, Indels: 66
0.67 0.15 0.18
Matches are distributed among these distances:
156 6 0.02
157 4 0.02
158 19 0.08
159 85 0.34
160 108 0.43
161 18 0.07
162 5 0.02
163 6 0.02
ACGTcount: A:0.35, C:0.14, G:0.20, T:0.31
Consensus pattern (158 bp):
CCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGACTTTTTAAGAGAGCAAACT
TTGATCTATCAAAAATGGTGAAAAGAAAAGATTTTCTTGTGACACCAAAGCATCAATGTCATGTT
TCCTAATGAAGGAAATGTGTTCTTGGTT
Found at i:70594 original size:159 final size:156
Alignment explanation
Indices: 67677--72524 Score: 881
Period size: 159 Copynumber: 30.6 Consensus size: 156
67667 ATGAGAAAAG
* * * * *
67677 TATGTTTATGGTGCCTAATCTTGAAAAGAATTGG-GATTAGTGTGAC-TATTCTTGTTTGTCTTA
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAA-TGGAGACTAGT-T-ACAGAATCATGTTTGTCTTA
* * * * **
67740 TTTAAGAGAGCA-AACTTTGATTCTATCAAAAATGGTGGAAACAATAGCTTTTCTTGCGACCCCA
63 TTTAA-A-AG-ATAACTTTGATTTTAACAAAAATGGT-GAAAGAAAAGCTTTTCTTGCGAAACCA
* * *
67804 ATGCATCAATGTCATGTATCCTAATT-AATGGAA
124 AAGCATCAATATCATGTATCCT-ATTGAAGGGAA
* * * * * * *
67837 TGTGTTCTTGGTTCCCAATCTTGAAAAGAATGGAG-CTTGTTACGAGAATCAATGCTTATCTTAT
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGTTAC-AGAATC-ATGTTTGTCTTAT
** * * * * * * * **
67901 TTAAGGGATTAATTTTGATTTTAAGGAAAATAAGG-CAAAGAAAA-CAATTCCATGC-AAAAAAA
64 TTAAAAGA-TAACTTTGATTTTAA-CAAAA-ATGGTGAAAGAAAAGC-TTTTCTTGCGAAACCAA
* * *
67963 ATCATCAATATCATTTATCCTAATG-AGGAGAA
125 AGCATCAATATCATGTATCCTATTGAAGG-GAA
* ** ** * * * * *
67995 TGTGTTTATT-GTGTATAATC-ACAAAAGGAATGAAGA-TCA-TAACTAGAATCCATGCTGGACT
1 TATGTTT-TTGGTGCCTAATCTTGAAAA-GAATGGAGACT-AGTTAC-AGAAT-CATGTTTGTCT
* * * * * * * *
68056 CATTT-GAGGCATGAACTTAGACTTT-ACAAAAATTGGAGGGAAG-AAAGCCTTTCTTGCGAAAC
61 TATTTAAAAG-AT-AACTTTGATTTTAACAAAAA-TGG-TGAAAGAAAAGCTTTTCTTGCGAAAC
* * * *
68118 CAAAGCATCAATATCATCTATCCTAATG-AGAAGAC
122 CAAAGCATCAATATCATGTATCCTATTGAAG-GGAA
* * * * * * *
68153 TATGTTTATGATGCCTAATCTTGAAAAGAATGGGGATTAGTATGAC-TATTCATGTTTGTATTAT
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGT-T-ACAGAATCATGTTTGTCTTAT
* * * * * ** ** * **
68217 TTAAGAGACAAACTTTGATTCTATCAAAGACAGTGGAAAGAATGGCTTTTCTTTCGATCCCAAAG
64 TTAAAAGA-TAACTTTGATTTTAACAAAAATGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAAG
* * * ** *
68282 CATCAATGTCACGTATCTTAAAGAAGAGAA
127 CATCAATATCATGTATCCTATTGAAGGGAA
* * * * * * *
68312 TATGTTTTTGGCT-CCCAATCTAGAAAAGAATGGAGACTA-ATGCGAGAATCGCTGCTTGTCATA
1 TATGTTTTTGG-TGCCTAATCTTGAAAAGAATGGAGACTAGTTAC-AGAATC-ATGTTTGTCTTA
** ** * * * **
68375 TTTAAGGGATGAA-TTCTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTCCATGCGAAAGAA
63 TTTAAAAGAT-AACTT-TGATTTTAACAAAAAT-GGTG-AAAGAAAAGCTTTTCTTGCGAAACCA
* * * *
68438 AATCAACAATATCATTTATCCTACTG-AGGAGAA
124 AAGCATCAATATCATGTATCCTATTGAAGG-GAA
* * * ** * ** * * * *
68471 TGTGCTTATATTGCCTAAAC-ACAAAATGAATGAAGA-TCGTTACTAGAATCCATGTTGGTCTCA
1 TATGTTTTTGGTGCCTAATCTTGAAAA-GAATGGAGACTAGTTAC-AGAAT-CATGTTTGTCTTA
* * * * ** * *
68534 TTT-GAGGCATGGACTTAGACATTATA-AAAATTGGTGAGAAG-AAAGCCTTTT-TTGTGAAACC
63 TTTAAAAG-AT-AACTTTGATTTTA-ACAAAAATGGTGA-AAGAAAAG-CTTTTCTTGCGAAACC
* * *
68595 AAAGCGTCAATATCGTGTATCC--TT-AAGAGAAGAC
123 AAAGCATCAATATCATGTATCCTATTGAAG-G--GAA
* * * * * * * *
68629 TATGTTTATGGTGCCTAATCCTGATAAGAATGGGGATTAGCATGAC-TATTCATGTTTGTCTTA-
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAG--TTACAGAATCATGTTTGTCTTAT
* * ** * ** * **
68692 TTAAAGAGATAAATTTTGATTCTATTAAATACTATTGAAAGAAAAGCTTTTCTTGTGACGCCAAA
64 TTAAA-AGAT-AACTTTGATTTTAACAAA-AATGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAA
* * * *
68757 GCATCAATGTCATTTATCCTAATGAAGGGAT
126 GCATCAATATCATGTATCCTATTGAAGGGAA
* * * * * * * *
68788 TGTGTTTTTGGTTCCTAGTCATGAAAAGAATGGAGA-TTGTTATGAGAATCAATGCTTGCCTTAT
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGTTA-CAGAATC-ATGTTTGTCTTAT
** * ** * * * **
68852 TTAAGGGATGGACTTTGATTTTATGAAAAATAGG-GCAAAGGAAA-CATTTTCATGCAAAAGAAA
64 TTAAAAGAT-AACTTTGATTTTAACAAAAAT-GGTG-AAAGAAAAGC-TTTTCTTGCGAAACCAA
* * * *
68915 ATCATCAATATCATTTACCCTAATG-AGGAGAA
125 AGCATCAATATCATGTATCCTATTGAAGG-GAA
* * * * ** * * *
68947 TGTGTTTATAGTGCCTAGTC-ACAAAATGAATGAAGA-TCA-TTACTAGAATCCGTGTTTGTCCC
1 TATGTTTTTGGTGCCTAATCTTGAAAA-GAATGGAGACT-AGTTAC-AGAAT-CATGTTTGT-CT
* * * * ** * * * *
69009 T-TTTGACACACGAACTTACACTTT-ACAAAAATTTGAG-GGAAG-AAAGCCTTTCTTGCTAAAC
61 TATTTAAAAGA-TAACTTTGATTTTAACAAAAA--TG-GTGAAAGAAAAGCTTTTCTTGCGAAAC
* * * *
69070 CAAAGCATCAATATCATCTATCCTAATG-AGAAGAC
122 CAAAGCATCAATATCATGTATCCTATTGAAG-GGAA
** * * * * * * *
69105 TATGTTTACGGTGCCTAATCCTGATAAGAATGGGGATTAATATGAC-TATTCATGTTTGTCTTA-
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGT-T-ACAGAATCATGTTTGTCTTAT
* * * * * *
69168 TTAAAGAGATAAATTTTGATTCTATCAAATACTGTTGAAAGAAAAGCTTTTCTTACGAAACCAAA
64 TTAAA-AGAT-AACTTTGATTTTAACAAA-AATGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAA
* * ** **
69233 GCATCAATGTCATTTATCCTAACGAATAG-A
126 GCATCAATATCATGTATCCTATTGAAGGGAA
* * * * * ** *
69263 T-TGCATTTTTGGTTCCCAGTCATGAAAAGAATGGAGATTA-TTACGAGAATCAATACTTGCCTT
1 TATG--TTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGTTAC-AGAATC-ATGTTTGTCTT
** * *** * * * * **
69326 ATTTAAGGGATGAACTTTGATTTGATGGAAAATAGG-GCAAAGGAAA-CATTTCCATGCAAAAGA
62 ATTTAAAAGAT-AACTTTGATTTTAACAAAAAT-GGTG-AAAGAAAAGC-TTTTCTTGCGAAACC
* * * * *
69389 AAATCATCAATATCATTTACCCTAATG-AGAAGAA
123 AAAGCATCAATATCATGTATCCTATTGAAG-GGAA
* * * * ** * * **
69423 TGTATTTATAGTGCCTAATC-ACAAAATGAATGAAGA-TCA-TTACTAGAATCCATGTTTCTCCC
1 TATGTTTTTGGTGCCTAATCTTGAAAA-GAATGGAGACT-AGTTAC-AGAAT-CATGTTTGTCTT
* * * * ** * * * * *
69485 CTTT-GATGCACGAACTTACATTTT-ACAAAAAATGTTGGGAA-TAAAGCCTTTCTTGTGAAACC
62 ATTTAAAAG-A-TAACTTTGATTTTAAC-AAAAATGGT-GAAAGAAAAGCTTTTCTTGCGAAACC
* ** * * * *
69547 AAAGCATCCATATTGTCTATCCTAATG-AGAAGAC
123 AAAGCATCAATATCATGTATCCTATTGAAG-GGAA
* ** * * * * * * * *
69581 TAGGTTTACGGTGCCTAATCCTGAAAAGAATGGGGATTACTATGAC-TATTCATGTTTGACTTAG
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGT-T-ACAGAATCATGTTTGTCTTAT
* * * * * ** *
69645 TTAAGAGAGCA-AACTTTGATTCTATCAACAACGGTGAAAAGAAAAGATTTTCTTTTGACACCAA
64 TTAA-A-AG-ATAACTTTGATTTTAACAAAAATGGTG-AAAGAAAAGCTTTTCTTGCGAAACCAA
* *
69709 AGCATCAATGTCATGTATCCTAATGAAGGGAA
125 AGCATCAATATCATGTATCCTATTGAAGGGAA
* * * * * * *
69741 TGTGTTCTTGGT-TCTCAATCTTGAAAATAATGGAGAC-AGTTATGAGAATCGATGCTGGT-TAT
1 TATGTTTTTGGTGCCT-AATCTTGAAAAGAATGGAGACTAGTTA-CAGAATC-ATGTTTGTCT-T
*** * * * ** * * * * **
69803 ATTTATGGGATGCATTTTGATTTCAAGGAAACTAGG-GCAAAGAAAAGATTTCCATGC-AAAAGA
62 ATTTAAAAGAT-AACTTTGATTTTAACAAAAAT-GGTG-AAAGAAAAGCTTTTCTTGCGAAACCA
* * * * *
69866 AATTCATCAATATCATTTATCCTAATG-AGAAGAC
124 AA-GCATCAATATCATGTATCCTATTGAAG-GGAA
* * * * * * * * *
69900 TACGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAC-TATTCAAGTTTGACTT-T
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGT-T-ACAGAATCATGTTTGTCTTAT
* * * * * *
69963 TTGAAGAGAGCA-AACTTTGACTCTATCAAAAATGGTGGTAAGAAAAGCTTTTCTTGTGACACCA
64 TT-AA-A-AG-ATAACTTTGATTTTAACAAAAATGGT-GAAAGAAAAGCTTTTCTTGCGAAACCA
* * * *
70027 AAGCATCAATGTCATGTTTCCTAATGAAGGAAA
124 AAGCATCAATATCATGTATCCTATTGAAGGGAA
* * * * * * * *
70060 TGTGTTCTTGGTTCCTAATCATGAAAAGAATGGAGACTA-TTATGAGAATCGAGGCTTGTCATAT
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGTTA-CAGAATC-ATGTTTGTCTTAT
** * * ** * * * **
70124 TT-AGTGATGAATTTTGATTTTGAGGAAAATAGG-GCAAAGGAAA-CATTTCTATGCAAAATAAA
64 TTAAAAGAT-AACTTTGATTTTAACAAAAAT-GGTG-AAAGAAAAGCTTTTCT-TGCGAAACCAA
* * * * * **
70186 ATCATCTATATTATTTATCCTAATGAAGACAA
125 AGCATCAATATCATGTATCCTATTGAAGGGAA
* ** * * *
70218 TGTGTTTATT-GTGCCTAATC-ACAAAATGAATGAAGA-TCAG-TACTAGAATCCATGTATGACT
1 TATGTTT-TTGGTGCCTAATCTTGAAAA-GAATGGAGACT-AGTTAC-AGAAT-CATGTTTGTCT
* * * * * * * *
70279 CATTT--GAGGTACGACCTTAT-ACTTT-ACAAAAATTGGAGGGAAG-AAAGCCTTTCTTGCTAA
61 TATTTAAAAGATA--A-CTT-TGATTTTAACAAAAA-TGG-TGAAAGAAAAGCTTTTCTTGCGAA
* * * * *
70339 ACCAAAGCATCACTATCATCTATCCTAATG-AGAAGAC
120 ACCAAAGCATCAATATCATGTATCCTATTGAAG-GGAA
* * * *
70376 TATGTTTGTGGTGCCTAATCTTGAAAAGAATGGGGATTAG-TA-GGACTATTCATGTTTGTCTTA
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGTTACAGA--A-TCATGTTTGTCTTA
* * *
70439 TTTAAAAGATAAGCTTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTCCGACACCAAA
63 TTTAAAAGATAA-CTTTGATTTTAACAAAAATGG-TGAAAGAAAAGCTTTTCTTGCGAAACCAAA
*
70504 GCATCAATGTCATGTATCCTATTGAAGGGAA
126 GCATCAATATCATGTATCCTATTGAAGGGAA
* * * * *
70535 TATGTTTTTGGTTCCCAATCTTGAAAGGAATGGAGACT-GTTACAAGAATCGATGCTTGTCATAT
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGTTAC-AGAATC-ATGTTTGTCTTAT
* ** * * * * **
70599 TTAAGGGAAGA-ATC-TTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTCCATGCAAAAGAA
64 TTAA---AAGATAACTTTGATTTTAACAAAAAT-GGTG-AAAGAAAAGCTTTTCTTGCGAAACCA
* * ** *
70661 AATCATCAATATCATTTATCCTAACGAAGAGAA
124 AAGCATCAATATCATGTATCCTATTGAAGGGAA
* ** * * *
70694 TGTGTTTATT-GTGTCC-AAT-TACAAAAGGAATGAAGA-TCA-TTACTAGAATCCATGTTGGAC
1 TATGTTT-TTGGTG-CCTAATCTTGAAAA-GAATGGAGACT-AGTTAC-AGAAT-CATGTTTGTC
* * * * * * * * *
70754 TCATTT-GAGGTACGAACTTAT-ACTTT-ACAAAAATTG-GAAGGAAGAAAGCCTTTCTTGCTAA
60 TTATTTAAAAG-A-TAACTT-TGATTTTAACAAAAATGGTGAAAG-A-AAAGCTTTTCTTGCGAA
* * * * *
70815 ACCAAAGCATCAATATCGTCTATCCTAATG-AGAAGAC
120 ACCAAAGCATCAATATCATGTATCCTATTGAAG-GGAA
* * * * * * * * *
70852 TATATTTATAGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGGC-TATTCATGTTTGTCTTAT
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGT-T-ACAGAATCATGTTTGTCTTAT
* * *
70916 TTAAAAGACAAACTTTGATTTTAACAAAAAAGGTTGAAAGAAAAGCTTTTCTTGCGAGACCAAAG
64 TTAAAAGA-TAACTTTGATTTTAACAAAAATGG-TGAAAGAAAAGCTTTTCTTGCGAAACCAAAG
*
70981 CATCAATGTCATGTATCCTATTGAAGGGAA
127 CATCAATATCATGTATCCTATTGAAGGGAA
* * * * * * * *
71011 TGTGTTTTTGGTTCCAAATCTTGAAAGGAATGGAGACT-GTTACGAGAACCAAAGCTTGTCATAT
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGTTAC-AGAATC-ATGTTTGTCTTAT
** * ** * * * * * * *
71075 TTAAGGGATGAATTTTGATTTTAAGGAAATTCGG-GCAAAGAAAAGATTTCCATGTGACA-GAAA
64 TTAAAAGAT-AACTTTGATTTTAACAAAAAT-GGTG-AAAGAAAAGCTTTTCTTGCGAAACCAAA
* * *
71138 GTCATCAATATCATTTATCCGAATG-A-GGAA
126 G-CATCAATATCATGTATCCTATTGAAGGGAA
* * * * * *
71168 AATGTGTTTATAGTGCCTAATCAT-AAAATATAT-GA-ACATTGTTACTTGAATCCATGTTTGTC
1 TATGT-TTT-TGGTGCCTAATCTTGAAAAGA-ATGGAGAC-TAGTTAC-AGAAT-CATGTTTGTC
* * * * * *
71230 TCATTT-GAGGCATGAACTTAGACTTT-ACAAAAATTGGTGGGAAG-AAAGCTTTTCTTGCGAAA
60 TTATTTAAAAG-AT-AACTTTGATTTTAACAAAAA-TGGT-GAAAGAAAAGCTTTTCTTGCGAAA
* * * *
71292 CCAAAGCGTCAATATCATTTATCCT-TATG-AGAAGAC
121 CCAAAGCATCAATATCATGTATCCTAT-TGAAG-GGAA
* * * * * * * * *
71328 TAAGTTTATGATGCCTAATCCTGAAAAGAATGGGGATTAGTATGAC-TATTCATGTTTGCCTTA-
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGT-T-ACAGAATCATGTTTGTCTTAT
* * * * *
71391 TTAAAGAGACAAACTTTCATTCTATCAAAAATAGTAGAAAGAAAAGCTTTTCTTGC-AACACCAA
64 TTAAA-AGA-TAACTTTGATTTTAACAAAAATGGT-GAAAGAAAAGCTTTTCTTGCGAA-ACCAA
* * *
71455 AGCATCAATGTCATGTATTCTATTGAAGAGAA
125 AGCATCAATATCATGTATCCTATTGAAGGGAA
* * * * * *
71487 TGTGTTTTTGGAT-CCCAATCTGGAAAAGAATGGAGACT-GATACGAGAATCGATGCTTGTCATA
1 TATGTTTTTGG-TGCCTAATCTTGAAAAGAATGGAGACTAGTTAC-AGAATC-ATGTTTGTCTTA
* ** * ** * * * **
71550 TTCAAGGGATGAATTTTGATTTTAAGGAAAATAGG-CAAAGAAAAGATTTTCATGCGAAAGAAAA
63 TTTAAAAGAT-AACTTTGATTTTAACAAAAAT-GGTGAAAGAAAAGCTTTTCTTGCGAAACCAAA
* * * **
71614 TCAACAATATCATTTATCCTGCTG-AGGAGAA
126 GCATCAATATCATGTATCCTATTGAAGG-GAA
* * * ** ** **
71645 TGTGTTTATAGTGCCTAATC-ACAAAATGAATAAAGA-TCA-TTACTAGAATCCATGTTTGTCCC
1 TATGTTTTTGGTGCCTAATCTTGAAAA-GAATGGAGACT-AGTTAC-AGAAT-CATGTTTGTCTT
* * * * ** * * * * *
71707 CTTT-GATGCACGAACTTACACTTT-ACAAAAAATGGTGGGAA-TAAAGCCTTTCTTGTGAAACC
62 ATTTAAAAG-A-TAACTTTGATTTTAAC-AAAAATGGT-GAAAGAAAAGCTTTTCTTGCGAAACC
* *
71769 AAAGCATCAATATCATGTATCC--TT-ATGCGAA
123 AAAGCATCAATATCATGTATCCTATTGAAGGGAA
* * * * * * *
71800 TACTAAGTTTTTGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAC-TATTCATATTTGCCT
1 TA-T--GTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGT-T-ACAGAATCATGTTTGTCT
* * * * * *
71864 TA-TTAAAGAGACAAACTTTGATTCTATCAAAAACGGCTGAAAGAAAAGCTTTTCTTACGACACC
61 TATTTAAA-AGA-TAACTTTGATTTTAACAAAAATGG-TGAAAGAAAAGCTTTTCTTGCGAAACC
* * *
71928 AAAGCATCAATGTCCTGTATCCTACTGAAGGGAA
123 AAAGCATCAATATCATGTATCCTATTGAAGGGAA
** * * * *
71962 GGTGTTTTTGGTTTCC-AATCTTGAAAGGAATGGAGACT-GTTACGAGAATCGATGCTTGTCATA
1 TATGTTTTTGG-TGCCTAATCTTGAAAAGAATGGAGACTAGTTAC-AGAATC-ATGTTTGTCTTA
* * * * * * **
72025 TCTAAAGGATGAA-TCTTGATTTTAACGAAAATAGG-GCAAATAAAAG-ATTTCTATGCAAAAGA
63 TTTAAAAGAT-AACT-TTGATTTTAACAAAAAT-GGTG-AAAGAAAAGCTTTTCT-TGCGAAACC
* * *
72087 AAATCATCAATATCATTTATCCTAAT-AAGGAGAA
123 AAAGCATCAATATCATGTATCCTATTGAAGG-GAA
* ** ** * * * * *
72121 TGTGTTTATT-GTGTATAATC-ACAAAAGGAATGAAGA-TCA-TAACTAGAATCCATGCTGGACT
1 TATGTTT-TTGGTGCCTAATCTTGAAAA-GAATGGAGACT-AGTTAC-AGAAT-CATGTTTGTCT
* * * * * * * * *
72182 TATTT-GAGGCACGAACTTAGACTTT-ACAAAAATTGGAGGGAAG-AAAGCCTTTCTTGCGAAAT
61 TATTTAAAAG-A-TAACTTTGATTTTAACAAAAA-TGG-TGAAAGAAAAGCTTTTCTTGCGAAAC
* * **
72244 CAAAGCATCAATATCATCTATCCTAATG-AGAAAA
122 CAAAGCATCAATATCATGTATCCTATTGAAGGGAA
** * * * * * * *
72278 CTATGTTGATGATGCCTAATCCTGAAAAGAATGGGGATTAGTATGAC-TATTTATGTTTGTCTTA
1 -TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGT-T-ACAGAATCATGTTTGTCTTA
* * * * *** ** * ** *
72342 TTTAAGAGACAAACTTTGATTCTATCAAAAGCAGTGGAAAGAATTGCTTTTCTTCCGATCCCAAT
63 TTTAAAAGA-TAACTTTGATTTTAACAAAAATGGT-GAAAGAAAAGCTTTTCTTGCGAAACCAAA
* * ** *
72407 GCATCAATGTCACGTATCCTAAAGAAGAGAA
126 GCATCAATATCATGTATCCTATTGAAGGGAA
* * * * * *
72438 TAAG-TTTTGGTTCCTAATATTGAAAAGAATGGAGA-TTGTTACGAGAATCAATGCTTGCCTTAT
1 TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGTTAC-AGAATC-ATGTTTGTCTTAT
** *
72501 TTAAGGGATGAACATTGATTTTAA
64 TTAAAAGAT-AACTTTGATTTTAA
72525 GGAAAATAGG
Statistics
Matches: 3286, Mismatches: 1060, Indels: 686
0.65 0.21 0.14
Matches are distributed among these distances:
155 9 0.00
156 31 0.01
157 105 0.03
158 1214 0.37
159 1558 0.47
160 306 0.09
161 49 0.01
162 14 0.00
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (156 bp):
TATGTTTTTGGTGCCTAATCTTGAAAAGAATGGAGACTAGTTACAGAATCATGTTTGTCTTATTT
AAAAGATAACTTTGATTTTAACAAAAATGGTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATC
AATATCATGTATCCTATTGAAGGGAA
Found at i:73836 original size:316 final size:315
Alignment explanation
Indices: 72870--73888 Score: 879
Period size: 316 Copynumber: 3.2 Consensus size: 315
72860 AATGTATTCT
* * * * ** * * *
72870 TGGTTCCTAATCTTGAAAAGATTGGAAACT-GTTATGAGAATCGATGTCT-CTCATATTTAAGTG
1 TGGTGCCTAATCTTGAAAAGAATGGAGATTAG-TATGAGAATTAATGTTTGC-CTTATTTAAGGG
* * * * * *
72933 ATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAG-AGTTCCATGCAAAAGAAAATCATCAA
64 ATAAACTTTGATTTTAAGGAAAATACGGCAAAGAAAAGCATTTCCTTGCAAAACAAAATCATCAA
* * * * *
72997 AATCATTTCTCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAACATGAAAGAAGATCATT
129 TATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCATAAAATGAAAGAAGGTCATT
* *
73062 ACTAGAATCCATGTTTGTCTCCTTTGG---AACATAGACTTTTCAAAAATTAGTGGGAAGAAAGC
194 ACTAGAATCCATGTTTGTCTCCTTAGGACAAACTTAGACTTTTCAAAAATTAGTGGGAAGAAAGC
* *
73124 CTTTCTTGCGAAACCAATGCATCAATATCGTCTATCCTAATGAGAAGACTATG-TTA
259 CTTTCTTGCGAAATCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTA
* * * * **
73180 TGGTGCCTAAT-TCAGAAAAGAATGGTGATTAGTATG-GCTATTAATGTTTGTCTTATTTAACAG
1 TGGTGCCTAATCT-TGAAAAGAATGGAGATTAGTATGAG-AATTAATGTTTGCCTTATTTAAGGG
* * * * ** * * * *
73243 ACAAACTTTGATTCTAA-CAAAA-ACGGTTGAAAGAAAAGC-TTTATTTGCGACACCAAAGCATC
64 ATAAACTTTGATTTTAAGGAAAATACGG--CAAAGAAAAGCATTTCCTTGCAAAACAAAATCATC
* * * * * *
73305 AATGTCATCTATCCTAACGAGAAGACAT-TGTTTAT-GATGCCTAATCCTGAAAA-GAATG--GG
127 AATATCATTTATCCTAATGAGGAGA-ATGTGTTTATAG-TGCCTAATCAT-AAAATGAAAGAAGG
* * ** ** * **
73365 -GATTAGTATGACTATTTATGTTTGTCCTATTTAAGAGACAAACTTTGA-TTCTATC-AAAAGCA
189 TCATTACTA-GA--ATCCATGTTTGT-CTCCTT-AG-GACAAACTTAGACTT-T-TCAAAAATTA
* * * * * *
73427 GTGGAAAGAATAGCCTTTCCTT-CG--ATCCCAAGCATCAATGTC-ACGTATCCTAA-AAAAGAG
246 GTGGGAAGAA-AGCCTTT-CTTGCGAAAT-CAAAGCATCAATATCGTC-TATCCTAATGAGA-AG
* * *
73487 AATAAGTTTT
306 ACTATGTTTA
* * *
73497 TGGTTCCCAATCTTGAAAAGAATGGAGATT-GTTATGAGAATTAATGCTTGCCTTATTTAAGGGA
1 TGGTGCCTAATCTTGAAAAGAATGGAGATTAG-TATGAGAATTAATGTTTGCCTTATTTAAGGGA
* * * *
73561 TGAACTTTGATTTTAAGGAAAATA-GGCAAAG-GAAGCATTTCCTTGCAAAATAAAATTATCAAT
65 TAAACTTTGATTTTAAGGAAAATACGGCAAAGAAAAGCATTTCCTTGCAAAACAAAATCATCAAT
* *
73624 ATCATTTATCCTAATGCGGAGAATGTGTTTATAGTGCTTAATCATAAAATGAAAGAAGGTCATTA
130 ATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCATAAAATGAAAGAAGGTCATTA
*
73689 CTAGAATCCATGTTTGTCTCCTTCGAGGCACAAACTTAGACTTTTCAAAAATTGGTGGGAAGAAA
195 CTAGAATCCATGTTTGTCTCCTT--AGG-ACAAACTTAGACTTTTCAAAAATTAGTGGGAAGAAA
*
73754 GACTTTCTTGCGAAATCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTA
257 GCCTTTCTTGCGAAATCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTA
* * ** * *
73813 TGGTGCCTAATCTTGAAAAGAATGGGGCTTAGTATGACTATTCATGTTTGTCTTATTTAAGGGAT
1 TGGTGCCTAATCTTGAAAAGAATGGAGATTAGTATGAGAATTAATGTTTGCCTTATTTAAGGGAT
73878 AAACTTTGATT
66 AAACTTTGATT
73889 CTAACAAAAA
Statistics
Matches: 535, Mismatches: 125, Indels: 92
0.71 0.17 0.12
Matches are distributed among these distances:
307 6 0.01
308 6 0.01
309 7 0.01
310 127 0.24
311 10 0.02
312 1 0.00
313 1 0.00
314 3 0.01
315 31 0.06
316 237 0.44
317 84 0.16
318 15 0.03
319 7 0.01
ACGTcount: A:0.35, C:0.15, G:0.18, T:0.32
Consensus pattern (315 bp):
TGGTGCCTAATCTTGAAAAGAATGGAGATTAGTATGAGAATTAATGTTTGCCTTATTTAAGGGAT
AAACTTTGATTTTAAGGAAAATACGGCAAAGAAAAGCATTTCCTTGCAAAACAAAATCATCAATA
TCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCATAAAATGAAAGAAGGTCATTAC
TAGAATCCATGTTTGTCTCCTTAGGACAAACTTAGACTTTTCAAAAATTAGTGGGAAGAAAGCCT
TTCTTGCGAAATCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTA
Found at i:74894 original size:159 final size:158
Alignment explanation
Indices: 73119--82506 Score: 1930
Period size: 159 Copynumber: 59.3 Consensus size: 158
73109 TAGTGGGAAG
* * * * *
73119 AAAGCCTTTCTTGCGAA-ACCAATGCATCAATATCGTCTATCCTAATGAGAAGACTATG-TTATG
1 AAAGCTTTTCTTGC-AACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * * * *
73182 GTGCCTAATTCAGAAAAGAATGGTGATTAGTATGGCTATTAATGTTTGTCTTATTTAACAGACAA
65 GTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAA
* * *
73247 ACTTTGATTCTAACAAAAACGGTTGAAAGA
130 ACTTTGATTCTATCAAAAATGG-TGAAGGA
* * * *
73277 AAAGCTTTAT-TTGCGACACCAAAGCATCAATGTCATCTATCCTAACGAGAAGACAT-TGTTTAT
1 AAAGCTTT-TCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGA-ATATGTTTAT
* * * * * *
73340 GATGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTTATGTTTGTCCTATTTAAGAGACA
64 GGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACA
*** *
73405 AACTTTGATTCTATCAAAAGCAGTGGAAAGA
129 AACTTTGATTCTATCAAAAATGGT-GAAGGA
* * * * * * * * *
73436 ATAGCCTTTCCTT-CGATC-CC-AAGCATCAATGTCACGTATCCTAA-AAAAGAGAATAAGTTTT
1 AAAG-CTTTTCTTGC-AACACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTA
* * ** * ** * * * *
73497 TGGTTCCCAATCTTGAAAAGAATGGAGATT-GTTATGAGAATTAATGCTTGCCTTATTTAAGGGA
63 TGGTGCCTAATCCAGAAAGGAATGGAGATTAG-TATGACTATTCATGTTTGTCTTATTTAAGAGA
** * *** **
73561 TGAACTTTGATTTTAAGGAAAATAGGCAAAGG-
127 CAAACTTTGATTCTATCAAAAAT-GGTGAAGGA
* * ** ** * * * * *
73593 -AAGCATTTCCTTGCAAAATAAAATTATCAATATCATTTATCCTAATGCGGAGAATGTGTTTATA
1 AAAGC-TTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * * * * * ** **
73657 GTGCTTAAT-CATAAAATGAAAGAAGGTCATTACTA-GA--ATCCATGTTTGTCTCCTTCGAG-G
65 GTGCCTAATCCA-GAAAGGAATGGA-G--ATTAGTATGACTATTCATGTTTGTCTTATTTAAGAG
*
73717 CACAAACTTAGACTT-T-TCAAAAATTGGTG--GGAA
126 -ACAAACTTTGA-TTCTATCAAAAA-TGGTGAAGG-A
* * * *
73750 GAAAGAC-TTTCTTGCGAA-ATCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTA
1 -AAAG-CTTTTCTTGC-AACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTA
** * * * * *
73813 TGGTGCCTAATCTTGAAAAGAATGGGGCTTAGTATGACTATTCATGTTTGTCTTATTTAAGGGAT
63 TGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAC
* *
73878 AAACTTTGATTCTAACAAAAATGGTTGAAAGA
128 AAACTTTGATTCTATCAAAAATGG-TGAAGGA
* * * * *
73910 AAAGCTTTTTTTTGCGACACCAAAGCATCAATGTCATGTATCCTAA--AGAAGGGAATGTGTTTT
1 AAAGC-TTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAA--GAATATGTTTA
* * * * ** * * * * * * * * *
73973 TGATTCCCATTCTTGAAAGGAATGGAAACT-GTTATGA-GAATCAATGCTTATCATATTTTAGGG
63 TGGTGCCTAATCCAGAAAGGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAG
** * *** *
74036 ATGAATTTTGATT-TGAAGGAAAATAGG-GCAAAGA
126 ACAAACTTTGATTCT-ATCAAAAAT-GGTG-AAGGA
* * * * ** * * * * * *
74070 AAAGATTTTCGTGAAAAAGAAAATCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTATTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * ** *
74135 TGCCGAATCACA-AAATGAAAGAAGATCA-T-T-ACTATAATCAATGTTTGTCTCCTTTGAG-GC
66 TGCCTAATC-CAGAAAGGAATGGAGATTAGTATGACTAT--TC-ATGTTTGTCTTATTTAAGAG-
** * *
74195 ACGTACTTAGACTT-T-TTAAAAATTGGTG--GGA
126 ACAAACTTTGA-TTCTATCAAAAA-TGGTGAAGGA
* * * *
74226 ATAATGCCTTTCTTGCGAA-ACCAAAGCATCACTATCATCTATCCTAATGAGAAGACTATGTTTA
1 A-AA-GCTTTTCTTGC-AACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTA
* * *
74290 TGGTGCCTAATCCTAAAAAAGAATGG-GATTAGTTTGACTATTCATGTTTGTCTTATTTAAGAGA
63 TGGTGCCTAATCC-AGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGA
* * *
74354 GAAACTTTGATTCTAAT-AAAAACGGTGGAAAGA
127 CAAACTTTGATTCT-ATCAAAAATGGT-GAAGGA
* * * * * *
74387 AAAGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCTTAATGA-AGGGAATATGTTTTTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATG
* * ** * * * ** * * * *
74451 GTTCCCAATCTTGAAAGGAATGCAAACT-GTTATGAGAATTGATGCTTGTCATATTTAACG-GAT
65 GTGCCTAATCCAGAAAGGAATGGAGATTAG-TATGACTATTCATGTTTGTCTTATTTAA-GAGAC
* * *** * * *
74514 AAATTTTGATTTTAAGGAAAATAGAGCAAAGA
128 AAACTTTGATTCTATCAAAAATGGTG-AAGGA
* * * ** * * * * *
74546 AAAGATTTCCTTGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * ** *
74611 TGTCTAATCACA-AAAGGAATGAAGATCT--T-T-ACTAGAGTCCATGTTCATCTCATTT--GAG
66 TGCCTAATC-CAGAAAGGAATGGAGAT-TAGTATGACT--A-TTCATGTTTGTCTTATTTAAGAG
* *
74669 GCATGAACTTAGACTT-TA-CAAAAATTGGT--AGGA
126 ACA--AACTTTGA-TTCTATCAAAAA-TGGTGAAGGA
* * * * * * * *
74702 AGATAGCCTTTCTTGCAAAACCCGAAGCGTCAATATCATGTATCCTTATGCGAAGACTAAGTTTA
1 A-A-AGCTTTTCTTGCAACA-CCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTA
* * *
74767 TGGTGCCTAATCCAGAAAGGAATGGGGATTAGTATGACTATTCATGTTTGCCTTATTAAAGAGAC
63 TGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAC
74832 AAACTTTGATTCTATCAAAAATGGTTGAAGGA
128 AAACTTTGATTCTATCAAAAATGG-TGAAGGA
* * *
74864 AAAGCTTTTCTTGCAACACCAAAGCATCAATGTCATGTATCCTAAT-A-AAGGCAATGTGTTTTT
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAA-G-AATATGTTTAT
* * * ** ** * * * * * *
74927 GGTTCCCATTCTGGAAAGGAATGGAGA-CCGTTACGA-GAATCGATGCTTGTCATATTTAAGGGA
64 GGTGCCTAATCCAGAAAGGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAGA
** * * *** *
74990 TGAATTTTGATTTTAAGGAAAATAGG-GCAAAGA
127 CAAACTTTGATTCTATCAAAAAT-GGTG-AAGGA
* * * ** * * * * * * *
75023 AAAG-ATTTCGATGCAAAAGAAAATCGTCAATATCATTTATCCTAATGAGGAGAATGTCTTTATA
1 AAAGCTTTTC-TTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* ** * * * * ** * *
75087 GTGCCTAATCACA-AAATGAATAAAGATCATTACTAGA--ATCCATGGTTGTCTCCTTCGAAG-C
65 GTGCCTAATC-CAGAAAGGAATGGAGATTAGTA-T-GACTATTCATGTTTGTCTTATT-TAAGAG
* *
75148 ACGAACTTAGACTT-T-TCAAAAATTGGTG--GGAA
126 ACAAACTTTGA-TTCTATCAAAAA-TGGTGAAGG-A
* * * * *
75180 TAAAGCCTTTCTTGCGAA-ACGAAAGCATCAATATCGTCTATCCTAATGAGAAAAGACTATGTTT
1 -AAAGCTTTTCTTGC-AACACCAAAGCATCAATATCATGTATCCTAATGAG--AAGAATATGTTT
* * ** * *
75244 ATGGTGCCTAATCCAGAAAAGAATGGGGATTAGTACAACTATTCATGTTTGCCTTATTAAAGAGA
62 ATGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGA
75309 CAAACTTTGATTCTATCAAAAATGGTTGAAGGA
127 CAAACTTTGATTCTATCAAAAATGG-TGAAGGA
* ** * * *
75342 AAAGCATTTCTTGTGACACCAAAGCATCAATGTCATATATCCTAAT-A-AAGAGA-ATGTAATTT
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGA-ATATGT--TTA
* * ** ** * * * * * *
75404 TGGTTCCCAATCTTGAAAGGAATGGAGACCATTATGA-GAATCGATGCTTGTCATATTTAAGGGA
63 TGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGAGA
** * *** *
75468 TTAA-TCTTGATACTAAGGAAAATAGG-GCAAAGA
127 CAAACT-TTGATTCTATCAAAAAT-GGTG-AAGGA
* * * ** * * * * *
75501 AAAGATTTTCATGCAAAAAAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * * * *
75566 TGTCTAATCACA-AAAGGAATGAAGA-TA-T-TTACTAGAATCTATGCTTGTGTAATTT--GAGG
66 TGCCTAATC-CAGAAAGGAATGGAGATTAGTATGACT--ATTC-ATGTTTGTCTTATTTAAGAGA
* *
75625 CATGAACATAGACTT-TA-CAAAAATTGGT--AGGA
127 CA--AACTTTGA-TTCTATCAAAAA-TGGTGAAGGA
* * * * ** * * *
75657 AGATAGCCTTTCTTGCGAA-ACTCGAAGCGTCATTATCATGTATCCTTCTGCGAAGACTAAGTTT
1 A-A-AGCTTTTCTTGC-AACAC-CAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTT
* * * *
75721 ATGGTGCCTAATCCAGAAAAGAATAGG-GATTAGTATGACTATTAATGTTTGCCTTATTAAAGAG
62 ATGGTGCCTAATCCAGAAAGGAAT-GGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAG
* * *
75785 ACAAACTTTGATTCTATCAAAAACAGTTGAAGTA
126 ACAAACTTTGATTCTATCAAAAA-TGGTGAAGGA
* *** * * * *
75819 AAAGCTTTTCTAGTGTCACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGCTGTTTTT
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAAT-ATGTTTAT
* * * ** * * * * * *
75883 GGTTCCCAATCTAGAAAGGAATGGAGA-CCGTTACGA-GAATCGATGCTTGTCATATTTAAGGGA
64 GGTGCCTAATCCAGAAAGGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAGA
** * * *** *
75946 TGAATTTTGATTTTAAGGAAAATAGG-GCAATGA
127 CAAACTTTGATTCTATCAAAAAT-GGTG-AAGGA
* * * * ** * * * * * *
75979 AAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTCTTTATAG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
** ** * * ** * *
76044 TGCCTAATCACA-AAATAAATAAAGATCA-TCACTAGA--ATCCATGTTTGTC-TCCTT-CGAGG
66 TGCCTAATC-CAGAAAGGAATGGAGATTAGT-A-T-GACTATTCATGTTTGTCTTATTTAAGAGA
*
76103 CATGAACTTAGACTT-T-TCAAAAATTGGTG--GGAA
127 CA--AACTTTGA-TTCTATCAAAAA-TGGTGAAGG-A
* * * *
76136 GAAAGCCTTTCTTGCGAA-ACGAAAGCATCAATATCATCTATCCTAATGAGAAAAGACTATGTTT
1 -AAAGCTTTTCTTGC-AACACCAAAGCATCAATATCATGTATCCTAATGAG--AAGAATATGTTT
* * * *
76200 ATGGTGCCTAATCCAGAAAAGAATGGGGATTAGTATAACTATTCATGTTTG-CATTATTAAAGAG
62 ATGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTC-TTATTTAAGAG
* *
76264 GCAAACTTTGATTCTATCAAAAACGGTTGAAGGA
126 ACAAACTTTGATTCTATCAAAAATGG-TGAAGGA
* ** * * *
76298 AAAGCATTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGAGAATGTGTTTTTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATG
* * ** ** * * * * *
76362 GTTCCCAATCTTGAAAGGAATGGAGACCATTATGA-GAATCGATGCTTGTCATATTTAACTG-GA
65 GTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAA--GAGA
** * *** *
76425 TGAA-TCTTGATACTAAGGAAAATAGG-GCAAAGA
127 CAAACT-TTGATTCTATCAAAAAT-GGTG-AAGGA
** * * ** * * * * * * * *
76458 AAATATTTTCATGCAAAAAAAAATCATCAACATCATTTATCCTGATGAGGAGAATGTATTTATTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * * *
76523 TGTCTAATCACA-AAAGGGATGAAGA-TA-T-TTACTAGAATCTATGCTTGTCTAATTTAAG-G-
66 TGCCTAATC-CAGAAAGGAATGGAGATTAGTATGACT--ATTC-ATGTTTGTCTTATTTAAGAGA
* **
76582 CATGAACATAAACTT-TA-CAAAAATTGGT--AGGA
127 CA--AACTTTGA-TTCTATCAAAAA-TGGTGAAGGA
* * ** * * * *
76614 AGATAGCCTTTCTTGCGAA-ACCTGAAGTGTCAATATCATGTATCCTTATGCGAAGACTAAGTTT
1 A-A-AGCTTTTCTTGC-AACACC-AAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTT
* * * *
76678 ATGGTGCCTAATCCAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGCCTTATTAAAGAGA
62 ATGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGA
** *
76743 CAAACTTTGATTCTATCAAAAACAGT---TG-
127 CAAACTTTGATTCTATCAAAAATGGTGAAGGA
* * *
76771 -AAGCTTTTCTTG-AGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGA-AT-TTT-TG
1 AAAGCTTTTCTTGCA-ACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * ** ** * * * * * *
76830 GTTCCCAATCTGGAAAGGAATGGAGA-CCGTTATGA-GAATCGATGCTTGTCATATTTAAGGGAT
65 GTGCCTAATCCAGAAAGGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAGAC
* * * *** **
76893 GAATTTTGATTTTAAGGAAAATAGG-GCAAAAA
128 AAACTTTGATTCTATCAAAAAT-GGTG-AAGGA
* * * * *
76925 AAAG-ATTTCGATGCAAAAGAAAATCGTCAATATCGAAAATAGTCAATATCATTTATCCTAATGA
1 AAAGCTTTTC-TTGC-----AACA-C--CAA-A--G----CA-TCAATATCATGTATCCTAATGA
* * * * * ** * * *
76989 GGAGAATGTCTTTATAGTGCCTAATCACA-AAATGAATAAAGATCATTACTAGA--ATCCATGTT
49 GAAGAATATGTTTATGGTGCCTAATC-CAGAAAGGAATGGAGATTAGTA-T-GACTATTCATGTT
** ** * *
77051 TGTCTCCTTCGAG-GCACGAACTTAGACTT-T-TCAAAAATTGGT--AGGAA
111 TGTCTTATTTAAGAG-ACAAACTTTGA-TTCTATCAAAAA-TGGTGAAGG-A
* * * * * * * *
77098 GAAAGCTTTTTTTACGAA-ACGAATGCATCAATATCGTCTATCCTAATGGGAAAAGACTATGTTT
1 -AAAGCTTTTCTTGC-AACACCAAAGCATCAATATCATGTATCCTAAT--GAGAAGAATATGTTT
* * * * * ** * * *
77162 ATGGTGCCTTATCTAGAAAAGAATGGGGATTGGTACAAATATTCATGTTTGCCTTA-TTAAGAGG
62 ATGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGA
* * *
77226 CTAACCTTT-ATTTTATCAAAAACGGTTGAAGGA
127 C-AAACTTTGATTCTATCAAAAATGG-TGAAGGA
* * * * * * *
77259 AAAGCATTTCTTG-TACACCAAAGCATCAATGTTATGTATCCTAATGAGGAA-AATGTGTTTTTT
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGA-GAAGAATATGTTTATG
* * ** ** * * * * ** * * **
77322 GTTCCCAATCTTGAAAGGAATGGAGACCATTATGA-GAATCGGTGCATGTCATATTTAAGGGATG
65 GTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGAGACA
* * ** *
77386 AA-TCCTGATTTTTAGGAAAATAGGGCT-AA-GA
129 AACT-TTGA-TTCTATCAAAA-ATGG-TGAAGGA
* * * ** * * * * * *
77417 AAAGATTTTCATGCAAAAGAAAATCATCAATATCGTTTATCCTAATGAGGAGAATGTGTTTATTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * ** * *
77482 TGTCTAATCACA-AATGGAATGAAG-TT-CT-TTACTAGAACCATGTTTGTCTCATTTGAG-GCA
66 TGCCTAATC-CAGAAAGGAATGGAGATTAGTATGACT--ATTCATGTTTGTCTTATTTAAGAG-A
* * *
77542 CGAACTTAGATT-TCA-CAAAAAT-TTGAAGGAA
127 CAAACTTTGATTCT-ATCAAAAATGGTGAAGG-A
* * * * * *
77573 GAAAGCCTTTCTTGCAAAACCAAAGCATCAATACCATATATCCTTACAT--GAAGACTAAGTTTA
1 -AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCC-TA-ATGAGAAGAATATGTTTA
* * * * * *
77636 TGGTGCCTAATCCTGAAACGAATGGGGATTGGTATGACTATTTATGTTTGCCTT-TTTAAAGAGA
63 TGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTT-AAGAGA
* * * *
77700 TAAATTTTGATTCTATCAAAAATGGCGGAAAGA
127 CAAACTTTGATTCTATCAAAAATGG-TGAAGGA
* * * * * * * *
77733 AAAACTTTTCCTGCGACACCAAAGCATCAATGTCATGCATCCTAATGA-ATGGA-ATGTCTTCTT
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGT-TT-AT
* * * ** * * * * * *** *
77796 AGTTCCCAATCTTGAAAAGAATGGAAACT-GTTATGA-GAATCAATGTTTGTAAAATTTAAGGGA
64 GGTGCCTAATCCAGAAAGGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAGA
** * ** * **
77859 TGAA-TTCTGATTTTAAGGAAAACAGGGCAAAGG-
127 CAAACTT-TGATTCT-ATCAAAA-ATGGTGAAGGA
* * * ** * * * * *
77892 AAAGGTTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATCG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * * * *
77957 TACCTAATCACA-AAAGGAATGAAGATCATTACTAGA--ATCCATGTTGGACTCATTTAAG-GCA
66 TGCCTAATC-CAGAAAGGAATGGAGATTAGTA-T-GACTATTCATGTTTGTCTTATTTAAGAG-A
* * *
78018 CGAAC-TT-AGT-TA-CAAAAATTGGTG-GGGAA
127 CAAACTTTGATTCTATCAAAAA-TGGTGAAGG-A
* * * * ** *
78047 AAAGCCTTTCTTGTGAA-ACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACGATGTTTATA
1 AAAGCTTTTCTTG-CAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * *
78111 GTGCTTAATCCTA-AAAAGAATGGGGATTAGTATGACTTTTCATGTTTGTCTTATTTAAGAGACA
65 GTGCCTAATCC-AGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACA
*
78175 AACTTTGATTCTATC-AAAATGGGTGGAAAGA
129 AACTTTGATTCTATCAAAAAT-GGT-GAAGGA
* * ** * * *
78206 ATAGCTTTTCTTGCGATC-CCAAAGCATCAATGCCACGTATCCTAATGA-AGGGAATATGTTTTT
1 AAAGCTTTTCTTGC-AACACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTAT
* * * ** * * ** * * * * *
78269 TGTTCCCAATCTTGAAAAGAATGGAGACT-GTTATGAGAATTAATGCTTGCCTTACTTAAGAGAT
64 GGTGCCTAATCCAGAAAGGAATGGAGATTAG-TATGACTATTCATGTTTGTCTTATTTAAGAGAC
* * ***
78333 GAACTTTGATTTTAAGGAAAATAGG-GCAAAGG-
128 AAACTTTGATTCTATCAAAAAT-GGTG--AAGGA
* ** * ** * * *
78365 AAA-CATTTCCAAGCAAAATAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGCTTT-T
1 AAAGC-TTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATG-TTTAT
* * * * * * * * * * *
78428 AGTGCCTAAT-CATAAAATGAATGAAGATCATTATTA-GAATCTATGTTTGACTCATTT--GATG
64 GGTGCCTAATCCA-GAAAGGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGA-G
*** *
78489 CACCGGCTTAGACTTC-A-CAAAAATTGGTG--GG-
126 -ACAAACTTTGA-TTCTATCAAAAA-TGGTGAAGGA
* * * * * * * * *
78520 ---G-------AG-AAAACCAAAGCGTCAATAGCGTCTATCCTAATGAGAAGACTACGATTATGG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
** * * * * * * *
78574 TTTCTAATTCGGAAAAGAAAGGGGATTTGTATGACTATTCAAGTTTGTCTTATTTAAGAGAGCAA
66 TGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGA-CAA
* *
78639 ACATTGATTCTATCAAAAATGGTGGAAAGA
130 ACTTTGATTCTATCAAAAATGGT-GAAGGA
* * * * * *
78669 AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCCTGCATCCTAATGA-ATGGAATGTGATTT-T
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATG-TTTAT
* * ** ** * * * * * *
78732 GGTTCCCAATCTTGAAAGGAATGGAGACAATTATGA-GAATCGAT-TCTTATCATATTTAAGGGA
64 GGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTC-ATGT-TTGTCTTATTTAAGAGA
** * * * * *
78795 TGAATTTTGATTTTAACGAAAATAGG-GCAAAGA
127 CAAACTTTGATTCTATCAAAAAT-GGTG-AAGGA
* * * * ** * * * * *
78828 AAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * * ** *
78893 TGCCTAAT-CATAAAATGAAAGAAGATCA-T-T-ACTAGAATCTATGTTTGT-TGCCTTTGAG-G
66 TGCCTAATCCA-GAAAGGAATGGAGATTAGTATGACT--ATTC-ATGTTTGTCT-TATTTAAGAG
* *
78952 CACGAACTTAGACTT-T-TCAAAAATAGGTG--GGA
126 -ACAAACTTTGA-TTCTATCAAAAAT-GGTGAAGGA
* * * * *
78984 AGAATGCCTTTCTTGCGAA-ACCAAAGCATCAATATCGTCTATCCTAATGAGAAGAGTATGTTGA
1 A-AA-GCTTTTCTTGC-AACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTA
* * * *
79048 TGGTGCCTAATCCTGAAAGGAATGGGGATTAGTATGACTATTTATGTTTGTCTTATTTAAGAGAG
63 TGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAC
* * *
79113 AAACTTTGATTCTAACAAAAACGGTTGAAAGA
128 AAACTTTGATTCTATCAAAAATGG-TGAAGGA
* *** * * * * *
79145 AAAGCATTTCTTGTGGCACCAAAGCATCAATGTCATGTATCCTATTGA-AGGAA-ATTTTTTTGG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* ** * ** * * * * * **
79208 -GTCCCAATCTTGAAAGGAATGGAGACT-GTTATGAGAATTGACGTTTATCATATTTAAGGGATG
66 TG-CCTAATCCAGAAAGGAATGGAGATTAG-TATGACTATTCATGTTTGTCTTATTTAAGAGACA
* * * *
79271 AA-TCCTGATT-TTTAAGGAAAATAGG-GCAAAGA
129 AACT-TTGATTCTATCA--AAAAT-GGTG-AAGGA
** * * ** * * ** * *
79303 AAATATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGGGAATGTGTTTATTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * ** * * *
79368 TGTCTAATCACA-AAAGGAATGAAGA-TA-T-TTCCTAAAATCCATGTTTGTCTAATTT--GAGG
66 TGCCTAATC-CAGAAAGGAATGGAGATTAGTATGACT---ATTCATGTTTGTCTTATTTAAGAGA
* *
79427 CATTAACTTAGACTT-TA-CAAAAAT--TAGTAGGAAA
127 CA--AACTTTGA-TTCTATCAAAAATGGT-GAAGG--A
* * * * * * *
79461 AAAGCCTTTCTTGTGAA-ACCAAAGCGTCAATATCATGTATCCTTATGTGAAGACTAAGTTTATG
1 AAAGCTTTTCTTG-CAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * * *
79525 GTGCCTAGTCCAGAAAAGAATAGG-GATTAGTATGACTATTCATGTTTATCTCATTTAAGAGAAA
65 GTGCCTAATCCAGAAAGGAAT-GGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACA
* * *
79589 AACTTTGATTCTAACAAAAACGGTTGAAAGA
129 AACTTTGATTCTATCAAAAATGG-TGAAGGA
*** * *
79620 AAAGCATTTT-TTGCGGTACCAAAGCATCAATGTCATGTATCCTAATGA-AGAGAATGTGCTTT-
1 AAAGC-TTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATG-TTTA
* * ** * * * * * * * * * * * *
79682 TGGTTCCCAATCTTGAAAAGAATGAAGACTATTTTGA-GAATCGAGGCTTGTCATATTTATGGGA
63 TGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGAGA
** * ** * * *
79746 TGAA-TCTTGATTTTAAGGAAAATAAGG-CAAAGA
127 CAAACT-TTGATTCT-ATCAAAA-ATGGTGAAGGA
* * * * ** * * * * * * *
79779 AAAGATTTCCATGCAAAAGAAAATCATCGATATCATTTATCCTAATGAGGAGAATGTCTTTATAG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * ** ** **
79844 TGCCTAATCACA-AAATGAA-AGAGATCATTACTAGA--ATCCACATTTGTCTCCTTCGAG-GTA
66 TGCCTAATC-CAGAAAGGAATGGAGATTAGTA-T-GACTATTCATGTTTGTCTTATTTAAGAG-A
* *
79904 CGAACTTAGACTT-T-TCAAAAATTGGTG--GGAA
127 CAAACTTTGA-TTCTATCAAAAA-TGGTGAAGG-A
* * * ** * * *
79935 GAAAGCCTTTCTTGTGAA-ACGAAAGCATCAATATTGTCTAT-CTAATGAGAAGACTATGTTCAT
1 -AAAGCTTTTCTTG-CAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTAT
* * * ** *
79998 GGTGCCTAATCTAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTACCTTATTAAAGAGACA
64 GGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACA
*
80063 AACTTTGATTCTATCAAAAACGGTTGAA-GA
129 AACTTTGATTCTATCAAAAATGG-TGAAGGA
* * * * * *
80093 AAAACATTTCTTGCAACACCAAAGCATCAATGTCATGTATCCTAAT-AAAGAGAATGTGTTTTTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATG
* * ** ** * * * * * **
80157 GTTCCCAATCTTGAAAGGAATGGAGACCATTATGA-GAATCGATGGTTGTCATATTTAAG-GATG
65 GTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGAGACA
* * *** *
80220 AA-TCATGATTTTAAGGAAAATAGG-GCAAAGA
129 AACT-TTGATTCTATCAAAAAT-GGTG-AAGGA
* * * * ** * * * * * * **
80251 AAAGATTTCCATGCAAAAGAAAATCATCGATATCATTTATCCTAATGAGGAGAATGTGTTTGTTA
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* ** * ** *
80316 TGTCC-AATCACA-AAAGGAAT-GATGATCT-TTACT-AAAATCCATGTTTGTCTCGTTTCAG-G
66 TG-CCTAATC-CAGAAAGGAATGGA-GAT-TAGTA-TGACTATTCATGTTTGTCTTATTTAAGAG
** * * *
80375 -CATGAACTTAAATTTTA-C-AAAAT-TTGTAGGAA
126 ACA--AACTTTGATTCTATCAAAAATGGTGAAGG-A
* * * * * *
80407 GAAAGAC-TTTCTTGCAAAACCAAAGCATCTATAT-ATGTATCCTTATGCGAAGACTAAGTTTAT
1 -AAAG-CTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTAT
* * * * * *
80470 GGTGCCTAATCCTGAAAAGAATGGGGATTGGTATGACTATTCATGTTTGCCTT-TTACAAGAGAC
64 GGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATT-TAAGAGAC
* *
80534 AAATTTTGATTCTATCAAAAATGGTGGAAAGA
128 AAACTTTGATTCTATCAAAAATGGT-GAAGGA
* * * * * * * *
80566 AAAGCTTTTCCTTACGATACCAAAGCATCAATGTCATGCATCCTAATGA-AGGGA-ATGTTTTCT
1 AAAGCTTTT-CTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATG-TTT-A
* * * * * * * ***
80629 TGGTTCCCAATCTTCA-AAA-GAATAGAAACT-GTTATG--TGAATCAATATTTGTAAAATTTAA
63 TGGTGCCTAATC--CAGAAAGGAATGGAGATTAG-TATGACT-ATTC-ATGTTTGTCTTATTTAA
* ** * * *
80689 GGGATGAATTTTGATT-T-TTAGGAAAATAGG-GCAAAGA
123 GAGACAAACTTTGATTCTATCA--AAAAT-GGTG-AAGGA
** * * ** * * * * *
80726 AAAAATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * * * *
80791 TGTCTAAT-CACCAAAGGAA-GGAAGATCA-T-T-ACTAGAATCTATGTTGGACTCATTTGAG-G
66 TGCCTAATCCA-GAAAGGAATGG-AGATTAGTATGACT--ATTC-ATGTTTGTCTTATTTAAGAG
* *
80850 CACGAACTTGGACTT-TA-CAAAAATTGGTG--GGA
126 -ACAAACTTTGA-TTCTATCAAAAA-TGGTGAAGGA
* * * * *
80882 AGAAGGTCTTCCTTTCGAA-ACCAAAGCATCAATATCGTCTATCCTAATGAGAA-AACTATG-TT
1 A-AAGCT-TTTCTTGC-AACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAA-TATGTTT
* *
80944 ATGGTGCCTAATCCAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGA-A
62 ATGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGA
* * *
81008 TGCAAACTTTGATTCGATCAAAAACGGTGGAAAGA
127 --CAAACTTTGATTCTATCAAAAATGGT-GAAGGA
* * * * * * *
81043 AAAGCTTTCCTTACTACACCAAAGCATCAATGTCATGTATCCTAATGAGGAGAATGTGTTCT-TA
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTT-TATG
* * ** * * ** * * * * * * **
81107 GTTCCAAATCTTGAATA-GAATGGAGACTATTATGAGAATTGAAGCTTGCCATATTTAAGGGATT
65 GTGCCTAATCCAGAA-AGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACA
* * * *** *
81171 AATTTTGTTTTTAAGGAAAATAGG-GAAAAGA
129 AACTTTGATTCTATCAAAAAT-GGTG-AAGGA
* * * * ** ** * * * *
81202 AAAGATTTCCATGCAAAAGAAAATTATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATCG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * *
81267 TGCCTAATCACA-AAATGAATGAAGA-TCGT-T-ACTAGAATGCATGTTTGACTTATTTGAG-GC
66 TGCCTAATC-CAGAAAGGAATGGAGATTAGTATGACT---ATTCATGTTTGTCTTATTTAAGAG-
* *
81327 ACGAACTTAGACTT-TAT-AAAAATTGGTG--GGAAA
126 ACAAACTTTGA-TTCTATCAAAAA-TGGTGAAGG--A
* ** * * *
81360 AAAGCCTTTCTTGCGAA-ACCAAAGCATC-ATAATTGTTTATCCTAATAAGAAGACTATG-TTAT
1 AAAGCTTTTCTTGC-AACACCAAAGCATCAAT-ATCATGTATCCTAATGAGAAGAATATGTTTAT
* * * * *
81422 GGAGCCTAATCCAGAAAAGAATGGGGAATAGTATGACTATTCATGTTTGTCTCATTTAAGAGACA
64 GGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACA
* * *
81487 AACTTTGATTCTAACAAAAACGGTTGAAAGA
129 AACTTTGATTCTATCAAAAATGG-TGAAGGA
* * * *
81518 AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGAGAATGTGTTTTTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATATGTTTATG
* * ** * * * * * * *
81582 GTTCCCAATCTC-GAAAGGAATGGAGACCATTATGA-GAATCGATGGTTGTCATATTTAAGGGAT
65 GTGCCTAATC-CAGAAAGGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGAGAC
* * * *** *
81645 GAA-TCATGATTTTAGGGAAAATAGG-GCAAAGA
128 AAACT-TTGATTCTATCAAAAAT-GGTG-AAGGA
* * * * ** * * * * * * * **
81677 AAA-ATTTCCATGCAAAAGAAAATCATCGATATCATTTGTCCTAATGAGGAGAATGTGTTTGTTA
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * ** * ** *
81741 TGTCC-AATCACA-AAAGGAATGAAGATCT-TTACT-AAAATCCATGTTTGTCTCGTTT--GAGT
66 TG-CCTAATC-CAGAAAGGAATGGAGAT-TAGTA-TGACTATTCATGTTTGTCTTATTTAAGAGA
** * * *
81800 CATGAACTTAAATTTTA-C-AAAAT-TTGTAGGAA
127 CA--AACTTTGATTCTATCAAAAATGGTGAAGG-A
* * * * * *
81832 GAAAGAC-TTTCTTGCAAAACCAAAGCATCTATATCATGTATCCTTATGCGAAGACTAAGTTTAT
1 -AAAG-CTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTAT
* * * * * *
81896 GGTGCCTAATCCTGAAAAGAATGGGGATTGGTATGACTATTCATGTTTGCCTT-TTACAAGAGAC
64 GGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATT-TAAGAGAC
* *
81960 AAATTTTGATTCTATCAAAAATGGTGGAAAGA
128 AAACTTTGATTCTATCAAAAATGGT-GAAGGA
* * * * * * * * *
81992 AAAGCTTTTCCTACGATACCAAAGCATCAATGTCATGCATCCTAATGA-AGGGA-ATGTTTTCTT
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATG-TTT-AT
* * ** * * * * * * * *** *
82055 GGTTCCCAATCTTGAAAAGAATAGAAACTATTATG--TGAATCAATATTTGTAAAATTTAAGGGA
64 GGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACT-ATTC-ATGTTTGTCTTATTTAAGAGA
** * * *
82118 TGAATTTTGATT-T-TTAGGAAAATAGG-GCAAAGA
127 CAAACTTTGATTCTATCA--AAAAT-GGTG-AAGGA
** * * ** * * * * *
82151 AAAAATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTG
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * * * *
82216 TGTCTAAT-CACCAAAGGAA-GGAAGATCA-T-T-ACTAGAATCTATGTTGGACTCATTTGAG-G
66 TGCCTAATCCA-GAAAGGAATGG-AGATTAGTATGACT--ATTC-ATGTTTGTCTTATTTAAGAG
* *
82275 CACGAACTTGGACTT-TA-CAAAAATTGGTG-A-GA
126 -ACAAACTTTGA-TTCTATCAAAAA-TGGTGAAGGA
* * * * *
82307 AGAAGGTCTTCCTTTCGAA-ACCAAAGCATCAATATCATCTATCCTAATGAGAAGACTATG-TTA
1 A-AAGCT-TTTCTTGC-AACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTA
* *
82370 TGGTGCCTAATCCAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAC
63 TGGTGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAC
* * * *
82435 AAACTTTGATTATAACAAAAACGGTTGAAAGA
128 AAACTTTGATTCTATCAAAAATGG-TGAAGGA
* *
82467 AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTAT
1 AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTAT
82507 TCTATTGAAG
Statistics
Matches: 6469, Mismatches: 2064, Indels: 1394
0.65 0.21 0.14
Matches are distributed among these distances:
143 2 0.00
144 72 0.01
145 17 0.00
146 9 0.00
148 5 0.00
149 58 0.01
150 4 0.00
151 1 0.00
152 4 0.00
153 29 0.00
154 29 0.00
155 127 0.02
156 210 0.03
157 635 0.10
158 1529 0.24
159 2437 0.38
160 950 0.15
161 205 0.03
162 33 0.01
163 8 0.00
164 1 0.00
166 3 0.00
168 1 0.00
169 1 0.00
170 4 0.00
171 20 0.00
172 3 0.00
173 2 0.00
174 16 0.00
175 46 0.01
176 6 0.00
177 2 0.00
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (158 bp):
AAAGCTTTTCTTGCAACACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
TGCCTAATCCAGAAAGGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAA
CTTTGATTCTATCAAAAATGGTGAAGGA
Found at i:76964 original size:16 final size:16
Alignment explanation
Indices: 76943--76974 Score: 55
Period size: 16 Copynumber: 2.0 Consensus size: 16
76933 CGATGCAAAA
*
76943 GAAAATCGTCAATATC
1 GAAAATAGTCAATATC
76959 GAAAATAGTCAATATC
1 GAAAATAGTCAATATC
76975 ATTTATCCTA
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
16 15 1.00
ACGTcount: A:0.47, C:0.16, G:0.12, T:0.25
Consensus pattern (16 bp):
GAAAATAGTCAATATC
Found at i:84340 original size:159 final size:157
Alignment explanation
Indices: 84138--85294 Score: 508
Period size: 159 Copynumber: 7.3 Consensus size: 157
84128 TGGTAGGGAG
* * *
84138 AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGATTATGG
1 AAAGCTTTTCTTGC-AAACCAAAGCATCAATATCTTCTATCCTAATGAGAAGACTATGTTTATGG
* * *
84203 TACCTAATCCTGAAAAGAATGGGGATTAGCAAC-ACTATTCATGTTTATCTTATTTAAGAGACAA
65 TGCCTAATCCTGAAAAGAATGGAGATT-GTAACGACTATTCATGTTTATCTTATTTAAGAGACAA
*
84267 ACTTTGATTCTAAGAAAAACGGTTGAAAGA
129 ACTTTGATTCTAAGAAAAATGG-TGAAAGA
* * * *
84297 AAAGCTTTTCTTGCAACACCAAAGCATCATTGTCTTGTATCCTAATGA-AGGGA--ATGTGTTAT
1 AAAGCTTTTCTTGCAA-ACCAAAGCATCAATATCTTCTATCCTAATGAGA-AGACTATGT-TTA-
* * * * * * * * * *
84359 TGGCT-CCCAATCTTGAAAGGAATGGAGATTGTTACGA-GAATCAATGCTTGTCATATTTAAGGG
62 TGG-TGCCTAATCCTGAAAAGAATGGAGATTGTAACGACTATTC-ATGTTTATCTTATTTAAGAG
** * * *
84422 ATGAATTTTGATTTTAAGGAAAATAGG-GCAAAGA
125 ACAAACTTTGATTCTAAGAAAAAT-GGTG-AAAGA
* * ** * * * *
84456 AAAGATTTTCATGCAATAGAAAATCATCAGTATCATT-TATCCTAATGAGGAA-ATTGTGTTTAT
1 AAAGCTTTTCTTGCAA-ACCAAAGCATCAATATC-TTCTATCCTAATGA-GAAGACTATGTTTAT
* * * * * * ** * * * *
84519 TGTGTCTAATCAC--AAAAGGAATGAAGATTTTTACTAGAATCCATGTTTGTCTCATTT--GAGG
63 GGTGCCTAATC-CTGAAAA-GAATGGAGATTGTAACGACTATTCATGTTTATCTTATTTAAGAGA
* * * *
84580 CATTAACTTAGACTTTTCA-AAAATTGGTGAGAAG-
126 CA--AACTTTGA-TTCTAAGAAAAATGGTGA-AAGA
* * * * *
84614 AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCATAATAAGAAGACTATGTTTATAG
1 AAAGCTTTTCTTGC-AAACCAAAGCATCAATATCTTCTATCCTAATGAGAAGACTATGTTTATGG
* *
84679 TGCCTAATCCTGAAAAGAATGGGGATTAGTAA-GACTATTTATGTTTATCTTATTTAAGAGACAA
65 TGCCTAATCCTGAAAAGAATGGAGATT-GTAACGACTATTCATGTTTATCTTATTTAAGAGACAA
* * *
84743 ACTTTCATTCTAACAAAAATGGTTAAAAGA
129 ACTTTGATTCTAAGAAAAATGG-TGAAAGA
* * * * * * * ** *
84773 AAAGCTTCTCTTGTGACACTAAAGCATAAATGTCTTGTATCCTAA--AGAAGAGAATGTAGTTTT
1 AAAGCTTTTCTTG-CAAACCAAAGCATCAATATCTTCTATCCTAATGAGAAGACTATGT--TTAT
* * * * * * * * * * *
84836 GGTTCCCAATCTTGAAAAGAATAGAGACTGTTACGA-GAATCAATGCTTGTCATATTTAA-AGGA
63 GGTGCCTAATCCTGAAAAGAATGGAGATTGTAACGACTATTC-ATGTTTATCTTATTTAAGA-GA
** * * * *
84899 TGAATTTTGATTTTAAGGAAAATAAGG-CAAAGA
126 CAAACTTTGATTCTAA-GAAAA-ATGGTGAAAGA
* * * ** * * * *
84932 AAAGATTTTCATGTAAAAGAAAATCATCAGTATCATT-TATCCTAATGAGGAA-AATGTGTTTAT
1 AAAGCTTTTCTTG-CAAACCAAAGCATCAATATC-TTCTATCCTAATGA-GAAGACTATGTTTAT
* ** * * * ** * * * *
84995 TGTGTTTAAT-C-GCAAAAGGAATGAAGATCT-TTACTAAAATCCAAGTTTGTCTCATTT--GAG
63 GGTGCCTAATCCTG-AAAA-GAATGGAGAT-TGTAACGACTATTCATGTTTATCTTATTTAAGAG
* * * * * *
85055 GCATGAACTTAGACTTTTCA-AAAATTGGTGGGAAG-
125 ACA--AACTTTGA-TTCTAAGAAAAATGGT-GAAAGA
* *
85090 AAAGCTTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTTATGAGAAGACTATG-TTATGG
1 AAAGCTTTTCTTGC-AAACCAAAGCATCAATATCTTCTATCCTAATGAGAAGACTATGTTTATGG
* * ** * * * *
85154 TGCCT-ATTCTAGAAAAGAATGGGGACAAGT-ATGACTATTCAAGTTTGTCTGATTTAAGAGACA
65 TGCCTAATCCT-GAAAAGAATGGAGA-TTGTAACGACTATTCATGTTTATCTTATTTAAGAGACA
* * *
85217 AACTTTGATTCTAACAAAAACGATTGAAAGA
128 AACTTTGATTCTAAGAAAAATG-GTGAAAGA
* * *
85248 AAAGCTTTTCTTGCAACACCAAAGCATCATTGTCTTGTATCCTAATG
1 AAAGCTTTTCTTGCAA-ACCAAAGCATCAATATCTTCTATCCTAATG
85295 TTTTTGATTC
Statistics
Matches: 724, Mismatches: 204, Indels: 141
0.68 0.19 0.13
Matches are distributed among these distances:
156 6 0.01
157 85 0.12
158 212 0.29
159 372 0.51
160 34 0.05
161 12 0.02
162 3 0.00
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.32
Consensus pattern (157 bp):
AAAGCTTTTCTTGCAAACCAAAGCATCAATATCTTCTATCCTAATGAGAAGACTATGTTTATGGT
GCCTAATCCTGAAAAGAATGGAGATTGTAACGACTATTCATGTTTATCTTATTTAAGAGACAAAC
TTTGATTCTAAGAAAAATGGTGAAAGA
Found at i:85304 original size:77 final size:77
Alignment explanation
Indices: 85220--85371 Score: 304
Period size: 77 Copynumber: 2.0 Consensus size: 77
85210 AGAGACAAAC
85220 TTTGATTCTAACAAAAACGATTGAAAGAAAAGCTTTTCTTGCAACACCAAAGCATCATTGTCTTG
1 TTTGATTCTAACAAAAACGATTGAAAGAAAAGCTTTTCTTGCAACACCAAAGCATCATTGTCTTG
85285 TATCCTAATGTT
66 TATCCTAATGTT
85297 TTTGATTCTAACAAAAACGATTGAAAGAAAAGCTTTTCTTGCAACACCAAAGCATCATTGTCTTG
1 TTTGATTCTAACAAAAACGATTGAAAGAAAAGCTTTTCTTGCAACACCAAAGCATCATTGTCTTG
85362 TATCCTAATG
66 TATCCTAATG
85372 AAGGGAATGT
Statistics
Matches: 75, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
77 75 1.00
ACGTcount: A:0.36, C:0.18, G:0.13, T:0.33
Consensus pattern (77 bp):
TTTGATTCTAACAAAAACGATTGAAAGAAAAGCTTTTCTTGCAACACCAAAGCATCATTGTCTTG
TATCCTAATGTT
Found at i:85845 original size:159 final size:156
Alignment explanation
Indices: 85297--88663 Score: 935
Period size: 159 Copynumber: 21.2 Consensus size: 156
85287 TCCTAATGTT
* * * *
85297 TTTGATTCTAACAAAAACGATTGAAAGAAAAGCTTTTCTTGC-AACACCAAAGCATCATTGTCTT
1 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGCGAA-ACCAAAGCATCAATATCTT
* ** * * * * *
85361 GTATCCTAAT-GAAGGGAATGTGTTTTTGGCT-CCCAATCTTGAAAAGAATGGAGATTATTACGA
65 CTATCCTAATAGAA--GAAAATGTTTATGG-TGCCTAATCCTAAAAAGAATGGAGATTAGTA--A
* * * ** *
85424 GAA-TCAATGCTTGTCATATTTAAGGGATGAAT
125 GAATTC-ATGTTTGTCTTATTTAAGAGACAAAC
* ** * * * * ** *
85456 TTTGATTTTAATGAAAATAGG--GCAAAGAAAAGATTTCCATGCAAAAAAAAAATCATCAATATC
1 TTTGATTCTAACAAAAAT-GGTTG-AAAGAAAAGCTTTTCTTGC-GAAACCAAAGCATCAATATC
* * * * * ** *
85519 ATT-TATCCTAA-CGAGGAAATTGTGTATATTGTGTCTAATCAC-AAAAAGAATTAAGA-TATTT
63 -TTCTATCCTAATAGAAGAAAATGT-T-TATGGTGCCTAATC-CTAAAAAGAATGGAGATTA-GT
* * *
85580 ACTAGAATCCATGTTTGTCTCATTT--GAGGCATTAAC
123 A--AGAATTCATGTTTGTCTTATTTAAGAGACA--AAC
* * * * * *
85616 TTAGACTT-T-TCAAAAATTGG-CGAGAAG-AAAGCCTTTCTTGTGAAACCAAAGCATCAATGTC
1 TTTGA-TTCTAACAAAAA-TGGTTGA-AAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC
* *
85677 GTCTATCCTAATGAGAAGAAAATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTAAGA
63 TTCTATCCTAAT-AGAAGAAAATGTTTATGGTGCCTAATCCTAAAAAGAATGGAGATTAGTAAGA
* *
85742 CTATTCATGTTTATCTTATTTATGAGACAAAC
127 --ATTCATGTTTGTCTTATTTAAGAGACAAAC
* * * * * *
85774 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTCTCTTGCGACACTAAAGCATAAATGTCTTG
1 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCTTC
** * * * * * * *
85839 TATCCTAA-AGAAGGGAATGTTGTTTTAGCT-CCCAATCTTGAAAAGAATGGAGACTATTACGAG
66 TATCCTAATAGAAGAAAATG-T-TTAT-GGTGCCTAATCCTAAAAAGAATGGAGATTAGTA--AG
* * * ** *
85902 AA-TCAATGCTTGTCATATTTAAGGGATGAAT
126 AATTC-ATGTTTGTCTTATTTAAGAGACAAAC
* * * * * * ** ** * *
85933 TTTGATTTTAAGGAAAATAAGG--CAAAGAAAAGATTTTCATGTAAAAGAAAATCATCAGTATCA
1 TTTGATTCTAA-CAAAA-ATGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC-
* * * * *
85996 TT-TATCCTAAT-GAAGAAAATGTGTTTATTGTGTCTAATCAC-AAAAGGAATGAAGATCTTTAC
63 TTCTATCCTAATAGAAGAAAA--TGTTTATGGTGCCTAATC-CTAAAAAGAATGGAGA---TTAG
* *
86058 TAA-AATCCATGTTTGTCTCATTT--GAGACATGAAC
122 TAAGAATTCATGTTTGTCTTATTTAAGAGACA--AAC
* * * **
86092 TTAGA--C-AATTCAAAAATTGGTGGGAAG-AAAGCCCTTCTTGCGAAACCAAAGCATCAATATC
1 TTTGATTCTAA--CAAAAA-TGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC
* * * * * *
86153 CTCTATCCTAATGAGAAGAACTATGTTCATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATG
63 TTCTATCCTAAT-AGAAGAA-AATGTTTATGGTGCCTAATCCTAAAAAGAATGGAGATTAGTAAG
* * * *
86218 ACTATTCAAGTTTATCTTATTTAAAAGATAAAC
126 A--ATTCATGTTTGTCTTATTTAAGAGACAAAC
* * * * * * *
86251 TTTGATTCTAACAAAAACGGTTGAGAGAAAAGCTTTTCTTGTGACACCAAAGCACCAATGTCTTG
1 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCTTC
** * * * * * * **
86316 TATCCTAA-AGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACT-GATCCGAC
66 TATCCTAATAGAAGAAAATG--TTTATGGTGCCTAATCCTAAAAAGAATGGAGATTAG-TAAGA-
* * * * **
86379 AATCAACGCTTGCCTTATTTAA-ACGATGAAC
127 ATTC-ATGTTTGTCTTATTTAAGA-GACAAAC
*** ** * ** *
86410 TTTGATT-TATGGAAAATAGG--GCAAAGAAAATATTTTCATG-GAAAAGAAAATCATCAATATC
1 TTTGATTCTAACAAAAAT-GGTTG-AAAGAAAAGCTTTTCTTGCG-AAACCAAAGCATCAATATC
* ** * * * * *
86471 ATT-TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC-AAAATGAATGAAGATCATTTC
63 -TTCTATCCTAAT-AGAAGAAAATGTTTATGGTGCCTAATC-CTAAAAAGAATGGAGATTA-GT-
* * * * * *
86534 TAGAATGCTTGTTTGACTTATTTGAG-GCACGAAC
123 AAGAATTCATGTTTGTCTTATTTAAGAG-ACAAAC
* * * * *
86568 TTAGACTT-T-TCAAAAATTGGTGGGAAG-AAAGCTTTTCTTGCGAAACCAAAGCATCAATATCG
1 TTTGA-TTCTAACAAAAA-TGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCT
* ** * * * * *
86630 CCTATCCTAATGAGAAGACTATG-TTATGGTGCCT-ATTCTAGAAAAGAACGGGGACTAGTATGA
64 TCTATCCTAAT-AGAAGAAAATGTTTATGGTGCCTAATCCTA-AAAAGAATGGAGATTAGTAAGA
* *
86693 CTATTCAAGTTTGTCTGATTTAAGAGACAAAC
127 --ATTCATGTTTGTCTTATTTAAGAGACAAAC
* * * * * * * * *
86725 TTTGATTCTAACAAAAACGGTTGAAATAAAAGCTTTTATGGCGACACCAAAGCGTCAATGTCATG
1 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCTTC
* ** * * * *
86790 TATCCTAATCATG-GGAATGTGTTTCTGGCT-CCTAATCTTGAAAGGAATGGAGATT-GTTACGA
66 TATCCTAAT-A-GAAGAAAATGTTTATGG-TGCCTAATCCTAAAAAGAATGGAGATTAG-TA--A
* * * ** *
86852 GAA-TCAATGCTTGTCATATTTAAGGGATGAAT
125 GAATTC-ATGTTTGTCTTATTTAAGAGACAAAC
* ** * * * * ** * *
86884 TTTGATTTTAAGGAAAATAGG--GCAAAGAAAAGATTTCCATGCAAAAAAAAAACATCAGTATCA
1 TTTGATTCTAACAAAAAT-GGTTG-AAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC-
* * ** *
86947 TT-TATCCT-ATAGAGGAAAATGTGTTTACT-GTGTCTAATCAC-AAAAAGAATAAAGATCT-TT
63 TTCTATCCTAATAGAAGAAAA--TGTTTA-TGGTGCCTAATC-CTAAAAAGAATGGAGAT-TAGT
** * *
87007 ACTAGAA-TCTATGTTTGTCACATTTGAG-GAACGAAC
123 A--AGAATTC-ATGTTTGTCTTATTTAAGAG-ACAAAC
* * * * * * * *
87043 TTAGACTT-T-CCAAAAATTGGTGGGAAG-AAAGCCTTTCTTGCAAAACCAAAGCATCAATGTCG
1 TTTGA-TTCTAACAAAAA-TGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCT
* *
87105 TCTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCCTGAAAAAGAATGGGGATTAGTATCA
64 TCTATCCTAAT-AGAAGAAAATGTTTATGGTGCCTAATCCT-AAAAAGAATGGAGATTAGTA--A
** *
87170 CTATTCATGTTTATCTTATTTAAGAGACAAAC
125 GAATTCATGTTTGTCTTATTTAAGAGACAAAC
* * * ** * * * *
87202 TTTGATTCTAACAAAAATGGTTGACAGAAAAACTTCTCTTGCGACGCTAAAGCATAAATGTCTTG
1 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCTTC
** * * * * * *
87267 TATCCTAA-AGAAGGGAATGTAGTTTTGGTTCCCAATCTTGAAAAGAATGGATATT-GTTACAAG
66 TATCCTAATAGAAGAAAATGT--TTATGGTGCCTAATCCTAAAAAGAATGGAGATTAG-T--AAG
* * * *** *
87330 AA-TCAATGCTTGTCATATTTAAGGGGTGAAT
126 AATTC-ATGTTTGTCTTATTTAAGAGACAAAC
* * * * ** * ** ** * *
87361 TTTGATTTTAAGGAAAATAAGG--CAAAGAAAAG-AATTCAATGTAAAAGAAAATCATCAGTATC
1 TTTGATTCTAA-CAAAA-ATGGTTGAAAGAAAAGCTTTTC-TTGCGAAACCAAAGCATCAATATC
* * * *
87423 ATT-TATCCTAATTAG--GAAAATGTGTTTATTGTGTCTAATCGC-AAAAGGAATGAAGATCTTT
63 -TTCTATCCTAA-TAGAAGAAAA--TGTTTATGGTGCCTAATC-CTAAAAAGAATGGAGA---TT
* * * *
87484 ACTAA-AATCCATGTTTGTCTCATTT--GAGGCATGAAC
120 AGTAAGAATTCATGTTTGTCTTATTTAAGAGACA--AAC
* * * * ** *
87520 TTAGACTT-T-TCAAAAATTGGTAGGAAG-AAAGCCCTTCTTGCGAAACCAAAGCATCAATATCA
1 TTTGA-TTCTAACAAAAA-TGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCT
* ** * * *
87582 TCTATCATAATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAC
64 TCTATCCTAAT-AGAAGAAAATGTTTATGGTGCCTAATCCTAAAAAGAATGGAGATTAGTAAGA-
*
87647 TATTCATGTTTATCTTATTTAAGAGACAAAC
127 -ATTCATGTTTGTCTTATTTAAGAGACAAAC
* * * *
87678 TTTGATTCTAACAAAAACGGTT-AAAGAAAAGCTTTTCTTGCGATACCAAAGCATCAATGTCTTA
1 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCTTC
** * * * * *
87742 TATCCT-ATAGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGATT-GTCACAAG
66 TATCCTAATAGAA--GAAAATGTTTATGGTGCCTAATCCTAAAAAGAATGGAGATTAGT---AAG
* * * * *
87805 AA-TCGATGCTTGTCATATTTAAGGGATAAAT
126 AATTC-ATGTTTGTCTTATTTAAGAGACAAAC
* *** * * * * ** * * *
87836 TTTGATTTTATGGAAAATAGG--GCAGAGAAAAGATTTTCATACGAAAGAAAATCATTAGTATCA
1 TTTGATTCTAACAAAAAT-GGTTG-AAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC-
* * * *
87899 TT-TATCCTAATAG--GAAAATGTGTTTATTGTGTCTAATCAC-AAAAGGAATGCAGATCTTTAG
63 TTCTATCCTAATAGAAGAAAA--TGTTTATGGTGCCTAATC-CTAAAAAGAATGGAGA---TTAG
* * *
87960 T-AGAATCCATGTTTGTCTCATTT--GAGGCATGAAC
122 TAAGAATTCATGTTTGTCTTATTTAAGAGACA--AAC
* * * * *
87994 TTAGACTT-T-TCAAAAATTGGTGGGAAG-AAAGCCTTTCTTGC-ATAACCAAAGCATCAATATC
1 TTTGA-TTCTAACAAAAA-TGGTTGAAAGAAAAGCTTTTCTTGCGA-AACCAAAGCATCAATATC
* ** * * * * *
88055 ATCTATCCTAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGACTAGTATGA
63 TTCTATCCTAAT-AGAAGAAAATGTTTATGGTGCCTAATCCTAAAAAGAATGGAGATTAGTAAGA
* * *
88120 CTATTCAGGTTTATCTCATTTAAGAGACAAAC
127 --ATTCATGTTTGTCTTATTTAAGAGACAAAC
* * * * * *
88152 TTTGATTCTAACAAAAACGTTTGAAAGAAAAGCTTTTATTGCGACACCAAAGCATCAATGTCTTG
1 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCTTC
** * * * ** * * * *
88217 TATCCTAA-AGAAGGGAATGTACTTTTGGTTCCCAATATTGAAAAGAATGGAGACTATTACGACA
66 TATCCTAATAGAAGAAAATGT--TTATGGTGCCTAATCCTAAAAAGAATGGAGATTAGTAAGA-A
* * * **
88281 ATCAATGCTTGCCTTATTTAA-AGGATGAAC
128 TTC-ATGTTTGTCTTATTTAAGA-GACAAAC
* ** ** * * * * * *
88311 TTTGATTTTAAGGAAAATAGG--GCAAAGAAAATATTTCCATGCAAAACAAAATCATCAATTTCA
1 TTTGATTCTAACAAAAAT-GGTTG-AAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATC-
* * * * * * *
88374 TT-TATCCTGAT-GAGGAGAATGTGTT-TGGAGTGCCTAATCAC-AAAATA-AATGAATATCATT
63 TTCTATCCTAATAGAAGAAAATGT-TTAT-G-GTGCCTAATC-CTAAAA-AGAATGGAGATTA-G
* * * * * *
88434 TCTAGAATGCTTGTTTGACTTATTTGAG-GCACGAAC
122 T-AAGAATTCATGTTTGTCTTATTTAAGAG-ACAAAC
* * * * * * *
88470 TTAGACTT-T-TCAAAAATTGGTGGGAAG-AAAGCCTTTCTTACGAAACCAAAGCATCAATATCG
1 TTTGA-TTCTAACAAAAA-TGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCT
* * * * * *
88532 TCTATCATAAT-G-AGAAGACTGTGTTATGGTGCCT-ATTCTAAAAAAGAATGGGGATTAGGATG
64 TCTATCCTAATAGAAGAA-AATGT-TTATGGTGCCTAATCCT-AAAAAGAATGGAGATTAGTAAG
* * *
88594 CCTATTCAAGTTTATCTTATTTAAGAGACAAAC
126 --AATTCATGTTTGTCTTATTTAAGAGACAAAC
88627 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTT
1 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTT
88664 ATTACTACAC
Statistics
Matches: 2284, Mismatches: 677, Indels: 495
0.66 0.20 0.14
Matches are distributed among these distances:
155 14 0.01
156 39 0.02
157 218 0.10
158 765 0.33
159 920 0.40
160 281 0.12
161 36 0.02
162 11 0.00
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.31
Consensus pattern (156 bp):
TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCTTC
TATCCTAATAGAAGAAAATGTTTATGGTGCCTAATCCTAAAAAGAATGGAGATTAGTAAGAATTC
ATGTTTGTCTTATTTAAGAGACAAAC
Found at i:86191 original size:477 final size:476
Alignment explanation
Indices: 85297--88717 Score: 4815
Period size: 477 Copynumber: 7.2 Consensus size: 476
85287 TCCTAATGTT
* * *
85297 TTTGATTCTAACAAAAACGATTGAAAGAAAAGCTTTTCTTGCAACACCAAAGCATCATTGTCTTG
1 TTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTG
* *
85362 TATCCTAATGAAGGGAATG-TGTTTTTGGCTCCCAATCTTGAAAAGAATGGAGATTATTACGAGA
66 TATCCTAAAGAAGGGAATGTTG-TTTTGGTTCCCAATCTTGAAAAGAATGGAGATTATTACGAGA
*
85426 ATCAATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAATGAAAATAGGGCAAAGAAAAGATT
130 ATCAATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATT
* * * * * *
85491 TCCATGCAAAAAAAAAATCATCAATATCATTTATCCTAACGAGGAAATTGTGTATATTGTGTCTA
195 TTCATGC-AAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTGTGTCTA
* * * *
85556 ATCACAAAAAGAATTAAGATATTTACTAGAATCCATGTTTGTCTCATTTGAGGCATTAACTTAGA
259 ATCACAAAAGGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGA
* * * *
85621 CTTTTCAAAAATTGGCGAGAAGAAAGCCTTTCTTGTGAAACCAAAGCATCAATGTCGTCTATCCT
324 CTTTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCT
** * *
85686 AATGAGAAGAAAATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTAAGACTATTCATG
389 AATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCAAG
*
85751 TTTATCTTATTTATGAGACAAAC
454 TTTATCTTATTTAAGAGACAAAC
* * * *
85774 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTCTCTTGCGACACTAAAGCATAAATGTCTTG
1 TTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTG
* * *
85839 TATCCTAAAGAAGGGAATGTTGTTTTAGCTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAA
66 TATCCTAAAGAAGGGAATGTTGTTTTGGTTCCCAATCTTGAAAAGAATGGAGATTATTACGAGAA
*
85904 TCAATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGATTT
131 TCAATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
* *
85969 TCATGTAAAAGAAAATCATCAGTATCATTTATCCTAATGAAGAAAATGTGTTTATTGTGTCTAAT
196 TCATGCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTGTGTCTAAT
* * *
86034 CACAAAAGGAATGAAGATCTTTACTAAAATCCATGTTTGTCTCATTTGAGACATGAACTTAGACA
261 CACAAAAGGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGACT
* * *
86099 ATTCAAAAATTGGTGGGAAGAAAGCCCTTCTTGCGAAACCAAAGCATCAATATCCTCTATCCTAA
326 TTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAA
* *
86164 TGAGAAGAACTATGTTCATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGT
391 TGAGAAG-ACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCAAGT
* *
86229 TTATCTTATTTAAAAGATAAAC
455 TTATCTTATTTAAGAGACAAAC
* * *
86251 TTTGATTCTAACAAAAACGGTTGAGAGAAAAGCTTTTCTTGTGACACCAAAGCACCAATGTCTTG
1 TTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTG
* * *
86316 TATCCTAAAGAAGGGAATGTAT-TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGA-TCCGAC
66 TATCCTAAAGAAGGGAATGT-TGTTTTGGTTCCCAATCTTGAAAAGAATGGAGA-TTATTACGAG
* * * ** * * *
86379 AATCAACGCTTGCCTTATTTAAACGATGAACTTTGA-TTTATGGAAAATAGGGCAAAGAAAATAT
129 AATCAATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGAT
* * * * *
86443 TTTCATGGAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTA
194 TTTCATGCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTGTGTCTA
* * * * * *
86508 ATCACAAAATGAATGAAGATCATTT-CTAGAATGCTTGTTTGACTTATTTGAGGCACGAACTTAG
259 ATCACAAAAGGAATGAAGATC-TTTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAG
* *
86572 ACTTTTCAAAAATTGGTGGGAAGAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCGCCTATCC
323 ACTTTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCC
* * *
86637 TAATGAGAAGACTATG-TTATGGTGCCT-ATTCTAGAAAAGAACGGGGACTAGTATGACTATTCA
388 TAATGAGAAGACTATGTTTATGGTGCCTAATCCTA-AAAAGAATGGGGATTAGTATGACTATTCA
* *
86700 AGTTTGTCTGATTTAAGAGACAAAC
452 AGTTTATCTTATTTAAGAGACAAAC
* * * * *
86725 TTTGATTCTAACAAAAACGGTTGAAATAAAAGCTTTTATGGCGACACCAAAGCGTCAATGTCATG
1 TTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTG
** * * * * *
86790 TATCCTAATCATGGGAATG-TGTTTCTGGCTCCTAATCTTGAAAGGAATGGAGATTGTTACGAGA
66 TATCCTAAAGAAGGGAATGTTGTTT-TGGTTCCCAATCTTGAAAAGAATGGAGATTATTACGAGA
86854 ATCAATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATT
130 ATCAATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATT
* * * *
86919 TCCATGCAAAAAAAAAACATCAGTATCATTTATCCT-ATAGAGGAAAATGTGTTTACTGTGTCTA
195 TTCATGCAAAAGAAAATCATCAGTATCATTTATCCTAAT-GAGGAAAATGTGTTTATTGTGTCTA
* * * * * *
86983 ATCACAAAAAGAATAAAGATCTTTACTAGAATCTATGTTTGTCACATTTGAGGAACGAACTTAGA
259 ATCACAAAAGGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGA
* * *
87048 CTTTCCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATGTCGTCTATCCT
324 CTTTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCT
* * *
87113 AATGAGAAGACAATGTTTATGGTGCCTAATCCTGAAAAAGAATGGGGATTAGTATCACTATTCAT
389 AATGAGAAGACTATGTTTATGGTGCCTAATCCT-AAAAAGAATGGGGATTAGTATGACTATTCAA
87178 GTTTATCTTATTTAAGAGACAAAC
453 GTTTATCTTATTTAAGAGACAAAC
* * * * * * *
87202 TTTGATTCTAACAAAAATGGTTGACAGAAAAACTTCTCTTGCGACGCTAAAGCATAAATGTCTTG
1 TTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTG
* * * *
87267 TATCCTAAAGAAGGGAATGTAGTTTTGGTTCCCAATCTTGAAAAGAATGGATATTGTTACAAGAA
66 TATCCTAAAGAAGGGAATGTTGTTTTGGTTCCCAATCTTGAAAAGAATGGAGATTATTACGAGAA
* * *
87332 TCAATGCTTGTCATATTTAAGGGGTGAATTTTGATTTTAAGGAAAATAAGGCAAAGAAAAGA-AT
131 TCAATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
* *
87396 TCAATGTAAAAGAAAATCATCAGTATCATTTATCCTAATTAGGAAAATGTGTTTATTGTGTCTAA
196 TC-ATGCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTGTGTCTAA
* *
87461 TCGCAAAAGGAATGAAGATCTTTACTAAAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
260 TCACAAAAGGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
* * * *
87526 TTTTCAAAAATTGGTAGGAAGAAAGCCCTTCTTGCGAAACCAAAGCATCAATATCATCTATCATA
325 TTTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTA
* *
87591 ATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGT
390 ATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCAAGT
87656 TTATCTTATTTAAGAGACAAAC
455 TTATCTTATTTAAGAGACAAAC
* *
87678 TTTGATTCTAACAAAAACGGTT-AAAGAAAAGCTTTTCTTGCGATACCAAAGCATCAATGTCTTA
1 TTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTG
* * * *
87742 TATCCTATAGAAGGGAATG-TGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGATTGTCACAAGA
66 TATCCTAAAGAAGGGAATGTTG-TTTTGGTTCCCAATCTTGAAAAGAATGGAGATTATTACGAGA
* * * *
87806 ATCGATGCTTGTCATATTTAAGGGATAAATTTTGATTTTATGGAAAATAGGGCAGAGAAAAGATT
130 ATCAATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATT
* * *
87871 TTCATACGAAAGAAAATCATTAGTATCATTTATCCTAAT-AGGAAAATGTGTTTATTGTGTCTAA
195 TTCATGCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTGTGTCTAA
* *
87935 TCACAAAAGGAATGCAGATCTTTAGTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
260 TCACAAAAGGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
*
88000 TTTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGC-ATAACCAAAGCATCAATATCATCTATCCT
325 TTTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGA-AACCAAAGCATCAATATCGTCTATCCT
* * * *
88064 AATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGGACTAGTATGACTATTCAGG
389 AATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCAAG
*
88129 TTTATCTCATTTAAGAGACAAAC
454 TTTATCTTATTTAAGAGACAAAC
* *
88152 TTTGATTCTAACAAAAACGTTTGAAAGAAAAGCTTTTATTGCGACACCAAAGCATCAATGTCTTG
1 TTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTG
** * * *
88217 TATCCTAAAGAAGGGAATGTACTTTTGGTTCCCAATATTGAAAAGAATGGAGACTATTACGACAA
66 TATCCTAAAGAAGGGAATGTTGTTTTGGTTCCCAATCTTGAAAAGAATGGAGATTATTACGAGAA
* * * * *
88282 TCAATGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTT
131 TCAATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
* * * * * * *** *
88347 CCATGCAAAACAAAATCATCAATTTCATTTATCCTGATGAGGAGAATGTGTTTGGAGTGCCTAAT
196 TCATGCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTGTGTCTAAT
** * * * * * *
88412 CACAAAATAAATGAATATCATTT-CTAGAATGCTTGTTTGACTTATTTGAGGCACGAACTTAGAC
261 CACAAAAGGAATGAAGATC-TTTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGAC
* *
88476 TTTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATCGTCTATCATA
325 TTTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTA
* * * *
88541 ATGAGAAGACTGTG-TTATGGTGCCT-ATTCTAAAAAAGAATGGGGATTAGGATGCCTATTCAAG
390 ATGAGAAGACTATGTTTATGGTGCCTAATCCT-AAAAAGAATGGGGATTAGTATGACTATTCAAG
88604 TTTATCTTATTTAAGAGACAAAC
454 TTTATCTTATTTAAGAGACAAAC
* * * * * * *
88627 TTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTATTACTACACCAAAGAATCAAAGTCATG
1 TTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTG
**
88692 TATCCTAATCAAGGGAACGTGTTGTT
66 TATCCTAAAGAAGGGAA--TGTTGTT
88718 GGGTCCCTGA
Statistics
Matches: 2613, Mismatches: 302, Indels: 58
0.88 0.10 0.02
Matches are distributed among these distances:
472 1 0.00
473 9 0.00
474 449 0.17
475 705 0.27
476 615 0.24
477 823 0.31
478 11 0.00
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.31
Consensus pattern (476 bp):
TTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTG
TATCCTAAAGAAGGGAATGTTGTTTTGGTTCCCAATCTTGAAAAGAATGGAGATTATTACGAGAA
TCAATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTT
TCATGCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTGTGTCTAAT
CACAAAAGGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCATGAACTTAGACT
TTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAA
TGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCAAGTT
TATCTTATTTAAGAGACAAAC
Found at i:91138 original size:951 final size:951
Alignment explanation
Indices: 89420--102778 Score: 12736
Period size: 951 Copynumber: 14.0 Consensus size: 951
89410 TTGTCATCAG
* *
89420 TCCCAATCTTGAAAAGAATGGAGACTATTATGAGAATCAATGCTTGCCTTATTTAAAGGATGAAA
1 TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAAC
89485 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATT
66 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATT
89550 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGAA
131 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGAA
* *
89615 TGCTTGTTTGACTTATTTGAGGCACGAATTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCATTT
196 TGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCTTT
* ** *
89680 CTTGCGAAACCAAAGCATCAATATCGTCTACCCTAATGAGAAGACTATGTTATGGCACCTATTTT
261 CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTATGGTGCCTATTCT
* * * * *
89745 AGAAAAGATTGGGGACTAGTATGACAATTCAAGTTTGTCTGATTTAAGAGACCAACTTTGATTCT
326 AGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAGAGACAAACTTTGATTCT
* * * *
89810 AACAAAAATGGTTGAAAGAAAAGCTTTTCTTGAGATAACAAAGCATCAATGTCTTGTATCCTAAA
391 AACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAAA
* * * * * * * *
89875 CAAGGGAATGTCTTTTTGGTTCCCATTCTTGAAAAGAATGGAAACTATTTTGAGAATCGACGTTT
456 GAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTATGAGAATCGATGCTT
*
89940 GTCAAATTT-AAGAGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAA
521 GTCATATTTAAAG-GATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAA
* *
90004 AAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTATGTCTAATTACAAAAG
585 AAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGTATGTCTAATCACAAAAG
* ** *
90069 GAATGAAGATCTTTACTGGAATCCATGTTTGTCTCATTTGAGTTAGGAACTTAGACTTTTCAAAA
650 GAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTTCAAAA
* *
90134 ATTGGTGGCG-AGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCGTCTATCATAATGAGATG
715 ATTGGTGG-GAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGAGAAG
*
90198 ACTATGTTTATGGTGCCAAATCCT-GAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTT
779 ACTATGTTTATGGTGCC-AATCCTAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTT
* *
90262 ATTTAAGAGAAAAACTTTGATTCTAACAAAAACGGTTGAAGGAAAAGCTTTTCTTGCGACACCAA
843 ATTTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAA
** *
90327 AGCATCAATGTCTTGTATCCTAATCAAGGGAATGTGTTTTTGGC
908 AGCATCAATGTCTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
* *
90371 TCTCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATAAAC
1 TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAAC
90436 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATT
66 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATT
90501 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGAA
131 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGAA
*
90566 TGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCATTT
196 TGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCTTT
* * *
90631 CTTGCGAAACCAAAGCATCAATATCGTCTACCCTAATGAGAAGACTATGTTATGGCGCCTATTTT
261 CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTATGGTGCCTATTCT
* * * * *
90696 AGAAAAGATTGGGGACTAGTATGACAATTCAAGTTTGTCTGATTTAAGAGACCAACTTTGATTCT
326 AGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAGAGACAAACTTTGATTCT
*
90761 AACAAAAACGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAAA
391 AACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAAA
* * * * * *
90826 GAAGGGAATGTCTTTTTGGTTCCCACTCTTGAAAAGAATGGAAACTGTTTTGAGAATCGACGTTT
456 GAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTATGAGAATCGATGCTT
* *
90891 GTCAAATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAA
521 GTCATATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAA
* *
90956 AGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTATGTCTAATTACAAAAGG
586 AGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGTATGTCTAATCACAAAAGG
* ** * *
91021 AATGAAGATCTTTACTGGAATCCATGTTTGTCTCATTTGAGATAGGAACTTAGACTTTTCAAAAT
651 AATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTTCAAAAA
*
91086 TTGGTGGGGAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGAGAAGAC
716 TTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGAGAAGAC
*
91151 TATGTTTATGGTGCCAAATCCT-GAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTAT
781 TATGTTTATGGTGCC-AATCCTAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTAT
* *
91215 TTAAGAGAAAAACTTTGATTCTAACAAAAACGGTTGAAGGAAAAGCTTTTCTTGCGACACCAAAG
845 TTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAG
** *
91280 CATCAATGTCTTGTATCCTAATCAAGGGAATGTGTTTTTGGC
910 CATCAATGTCTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
* * *
91322 TCTCAATCTTGAAAAGAATGGAGACTATCACGAGAATCAATGCTTGCCTTATTTAATGGATGAAC
1 TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAAC
* * *
91387 TTTGATTTTAAGGAAAATAGGGTAAAGAAAATATTTCCACGCAAATGAAAATCATCAATATCATT
66 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATT
91452 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGAA
131 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGAA
91517 TGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCTTT
196 TGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCTTT
* *
91582 CTTGC-ATAACCAAAGCATCAATATCGTCTATCCTAGTGAGAAAACTATGTATATGGTGCCTAAT
261 CTTGCGA-AACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGT-TATGGTGCCT-AT
* * * *
91646 CCT-GAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAAAGACAAACTTTGAT
323 TCTAGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAGAGACAAACTTTGAT
* *
91710 TCTCACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCTTGTATCCT
388 TCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCT
* * * * *
91775 AAAGAAGGGAATGTACTTTTGGTTCCCAATATTGAAAAGAATGGAGACTGTTACGACAATCAATG
453 AAAGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTATGAGAATCGATG
* * * * *
91840 CTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAAGGCAAAGAAAATATTTCCATGC
518 CTTGTCATATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGC
* * * * * *
91905 AAATGAAAATCATCAATTTCATTTATCCTGATGAGGAGAATGTGTTTGGAG-A-GCCTAATCACA
583 AAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTT--AGTATGTCTAATCACA
** * * * * ** *
91968 AAATAAATGAATATCATTT-GTAGAATGCTTGTTTGAATTATTTGAGGCACGAACTTAGACTTTT
646 AAAGGAATGAAGATC-TTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTT
* * ** * *
92032 CAAAAATTGGCGTGAAGAAAGCCTTTCTTGTGAAACCAAAGCATCAATAGCATCTATCCTAATGA
710 CAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGA
* * * * * *
92097 GAAGACTATGTTATAT--CGCCTATTCTAGAAAAGAATTGGGACTAGTATGACTATTCAAGTTTG
775 GAAGACTATGTT-TATGGTGCCAATCCTAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTG
* * *
92160 TCTGATTTAAGAGACAAACTTTGATTCTAACAAAAACGATTGAAAGAAAAGCTTTTCTTGCGATA
839 TCTTATTTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACA
*
92225 CCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGAATGTCTTTTTGGT
904 CCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
* * * * * * ** * *
92273 TCCCACTCTTGAAAAGAATGGAAACTATTATGAGAATCGATGTTTGTCAAATTTAAGGGATGAAT
1 TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAAC
* * *
92338 TTTGATTTTAAGGAAAATAGGACAAAGAAAAGATTTCCATGCCAAAA-AAAATCATCAGTATCAT
66 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATG-CAAAAGAAAATCATCAATATCAT
* * * * *
92402 TTATCCTAATGAGGAAAATGTGTTTATTGTGTCTAATCACAAAAGGAATGAAGATC-TTTACTAT
130 TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTT-CTAG
** * * * * * *
92466 AACCCATGTTTGTCTCATTTGAGGCAAGAACTTAGACTTTTCAGAAATTGGTGGGGAGAAAGCCT
194 AATGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCT
* *
92531 TTCTTGCAAAACCAAAGCATCAATATCGTCTATCATAATGAGAAGACTATGTTTATGGTGCCTAA
259 TTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATG-TTATGGTGCCT-A
* * *
92596 TCCT-GAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACAAACTTTGA
322 TTCTAGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAGAGACAAACTTTGA
*
92660 TTCTAACAAAAACGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCC
387 TTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCC
* * * *
92725 TAAAGAAGGGAATGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAAT
452 TAAAGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTATGAGAATCGAT
* * * * *
92790 GCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCAAG
517 GCTTGTCATATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATG
* * * * * * *
92855 AAAAAGAAAATCATCAATTTCATTTATCCTGATGAGGAGAATGTGTTT-GGAGTGCCTAATCACA
582 CAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGTA-TGTCTAATCACA
** * * * * * * * *
92919 AAATAAATGAATAT-TGTTTCTAGAATGCTTGTTTGACTTATTTGAGGAACAAACTTAGACTTTT
646 AAAGGAATGAAGATCT-TTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTT
*
92983 CAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCATAATGA
710 CAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGA
* * * *
93048 GAAGACTATG-TTATGGTGCCTATTCTAGAAAAGAATGGGGATTAGTATGACCATTCAAGTTTGT
775 GAAGACTATGTTTATGGTGCCAATCCTAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGT
* * * * *
93112 CTGATTTAAGAGACAAACTTTGATTCTAATAAAAATGTTTGAAAGAAAAGCTTTTATTGCGACAC
840 CTTATTTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACAC
* *
93177 CAAAGCATCAATGTCCATGTATCCTAATGAAGGGAATGTGTTTTTGGT
905 CAAAGCATCAATGT-CTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
* *
93225 TCCCAATCTTGAAAAGAAAGAAGACTATTTA-GAGAATCAATGCTTGCCTTATTT-AAGTGATGA
1 TCCCAATCTTGAAAAGAATGGAGACTA-TTACGAGAATCAATGCTTGCCTTATTTAAAG-GATGA
* *
93288 ACTTTGATTTTAAGGAAAATAGGGCAAAGGAAATATTTTCATGCAAAAGAAAATCATCAATATCA
64 ACTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCA
* * * *
93353 TTTACCCTAATGAGGAGAATGTGTTTATCGTGCCTAACCAC-AAATGAATGAAGATCATTTCTAA
129 TTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAG
* *
93417 AAT-CTATATTT-ATCTCATTTGAGGCACGAACTTAGA-TATTAT-AAAAATTGGTGGGAAGAAA
194 AATGCT-TGTTTGA-CTTATTTGAGGCACGAACTTAGACT-TT-TCAAAAATTGGTGGGAAGAAA
* * * * * *
93478 GCCTTTCTTGCGAAACCAAAGCATTAATATCATGTATCCTTATGAGAGGACTAAGCTTATGGTGC
255 GCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATG-TTATGGTGC
* * ** * ** *
93543 CTAGTCCT-GAAAAGATTATGGATTAGTATGACTATTCATGTTTGTCTTATTTTGGAGGCAAACT
319 CTA-TTCTAGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAGAGACAAACT
* * * * *
93607 TTGATTCTATCAAAAATGGTTGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGCCATGT
383 TTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGT
* * * * * *
93672 ATCCTAATGAA-GGAATTGTATTCTTGGTTCCTATTCTCGAAAAGAATGGAGACTGTTACGAGAA
448 ATCCTAAAGAAGGGAA-TGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTATGAGAA
* *
93736 TCGGA-GCTTGTCAAATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGACAAAGAAAAGATT
512 TC-GATGCTTGTCATATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATT
* * *
93800 TCCATGCCAAAA-AAAATCATCAGTATCATTTATCCTAATGAGGAAAATATGTTTATTGTGTCTA
576 TCCATG-CAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGTATGTCTA
* *
93864 ATCACAAAAGGAATGAAGATCTTTACTAGAACCCATGTTTGTCTCATTTGAGGCAGGAACTTAGA
640 ATCACAAAAGGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGA
* * * * *
93929 CTTTTCAGAAATTGGTGGGGAGAAAACCTTTCTTGCAAAACCAAAGCGTCAATATCGTCTATCAT
705 CTTTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCAT
*
93994 AATGAGAAGACTATGTTTATGGTGCCTAATCCT-GAAAACAATGGGGATTAGTATGACTATTCAT
770 AATGAGAAGACTATGTTTATGGTGCC-AATCCTAGAAAAGAATGGGGATTAGTATGACTATTCAT
* * *
94058 GTTTATCTTATTTAAGAGACCAACTTTGATTCTAACAAAAACGGTTAAAAGAAAAGCTTTTCTTG
834 GTTTGTCTTATTTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTG
**
94123 CGACACCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGAATGTAATTTTGGT
899 CGACACCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
94176 TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAAC
1 TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAAC
* * * *
94241 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTTCAAGAAAAAGAAAATCATCAATTTCATT
66 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATT
* * ** * * *
94306 TACCCTGATGAGGAGAATGTGTTTGGAGTGCCTAATCACAAAATAAATGAATAAT-GTTTCTAGA
131 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA-GATCATTTCTAGA
* *
94370 ATGCTTGTTTGACTTATTTGAGGAACGAACTTAGACTTTTTC-AAGATTGGTGGGAAGAAAGCCT
195 ATGCTTGTTTGACTTATTTGAGGCACGAACTTAGAC-TTTTCAAAAATTGGTGGGAAGAAAGCCT
* *
94434 TTCTTGCGAAACCAAAGCATCAATATCGTCTATCATAATGAGAAAACTATGTTATGGTGCCTATT
259 TTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTATGGTGCCTATT
*
94499 CTAGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAGAGAGAAACTTTGATT
324 CTAGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAGAGACAAACTTTGATT
* * ** * *
94564 ATAATAAAATTGGTTGAAAGAAAAGCTTTTATTGCGACACTAAAGCATCAATGTCTTGTATCCTA
389 CTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTA
* * * * *
94629 AAGAATGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGACAATCAATGC
454 AAGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTATGAGAATCGATGC
* * ** *
94694 TTGCCTTATTTAAAGGATGAACATTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCA
519 TTGTCATATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCA
* * * * * *
94759 AAAGAAAATCATCAATATCATTTATCCTGATGAGGAGAATGTGTTT-GGAGTGCCTAATCATAAA
584 AAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGTA-TGTCTAATCACAAA
** * * * * * * * *
94823 ATAAATGAATAT-TGTTTCTAGAATGCTTGTTTGACTTATTTGTGGCACGAACATAGACTTTTCA
648 AGGAATGAAGATCT-TTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTTCA
* * * * * *
94887 AAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAACATCAATAGCATCTATCCTGATGAGA
712 AAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGAGA
* * * * *
94952 AGACTATG-TTAT-GTCGCCTATTCTAGAAAAGAATGGGGACTAGTATGATTATTCAAGTTTGTC
777 AGACTATGTTTATGGT-GCCAATCCTAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTC
* * * * * * *
95015 TGAGTTAAGGGACAAACTTTGATTCTAACAGAAACAGTTGAAAGAAAAGCTTTTCTTGCAATACC
841 TTATTTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACC
* **
95080 AAAGCATCTATGTCTTGTATCCTAAAGAA-GGAATGCCTTTTTGGT
906 AAAGCATCAATGTCTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
* * * * * * * * *
95125 TCCCACTCTTGAAAGGAATGGAAACTATTATGAGAATCGATGTTTGTC-AAGTTTAAGGGATGAA
1 TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTA-TTTAAAGGATGAA
* * * * *
95189 TTTTGATTTTAAGGAAAATAGGGTAAAGAAAAGATTTCCATGCAAAACAAAATCATCAGTATCAT
65 CTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCAT
* * * * *
95254 TTATCCTAATGACGAAAATGTGTTTATTGTGTCTAATCACAAAAGGAATGAAGATC-TTTACTAG
130 TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTT-CTAG
* * * * ** * * *
95318 AATCCATGTTTGTCTCATTTGAGGCATAAACTTAGACTTTTTAGAAATTGGTGGGGAGAAAGCCT
194 AATGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCT
* **
95383 TTCTTGC-ATAACCAAAGCATCAATATCATCTATCAAAATGAGAAGACTATGTTTATGGTGCCTA
259 TTCTTGCGA-AACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATG-TTATGGTGCCT-
* * * *
95447 ATCCT-GAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGATAAACTTTG
321 ATTCTAGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAGAGACAAACTTTG
* * ** *
95511 ATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCAACACCAACGCATCAACATCTTGTTTC
386 ATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATC
* * * *
95576 CTAAAGAAGGGAATGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACT-TGAATCA
451 CTAAAGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTA-TGAGAATCG
* * * *
95640 ATGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCA
515 ATGCTTGTCATATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCA
* * * * * * * *
95705 AGCAAAAGAAAATCATCAATTTCATTTATCCTGATGAGGAGAATGTGTTT-GGAGTGCCTAATCC
580 TGCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGTA-TGTCTAATCA
** * * * * *
95769 CAAAATAAATGAATATCATTT-CTAGAATGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTT
644 CAAAAGGAATGAAGATC-TTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTT
* * * ** *
95833 TTCCAAGATTGGTCGGAAGAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTCTATCATAAT
708 TTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAAT
* * * * *
95898 GAGAAAACTATG-TTATGGTGCCTATTCTAGAAAAGAATGGGGATTAGTATGACTATTTAAGTTT
773 GAGAAGACTATGTTTATGGTGCCAATCCTAGAAAAGAATGGGGATTAGTATGACTATTCATGTTT
* * ** *
95962 GTCTTATTTAAAAGACAAACTTTGATTATAACAAAAATAGTTGAAAGAAAAGCTTTTATTGCGAC
838 GTCTTATTTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGAC
96027 ACCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
903 ACCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
* * *
96076 TCCCAATCTTGAAAAGAATGGAGACTGTTATGACAATCAATGCTTGCCTTATTTAAAGGATGAAC
1 TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAAC
*
96141 ATTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATT
66 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATT
* ** * * **
96206 TATCCTGATGAGGAGAATGTGTTTGGAGTGCCTAATCACAAAATAAATGAATATTGTTTCTAGAA
131 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGAA
*
96271 TGCTTGTTTGACTTATTTGAGGCACGAACATAGACTTTTCAAAAATTGGTGGGAAGAAAGCCTTT
196 TGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCTTT
* *
96336 CTTGCGAAACCAAAGCATCAATATCATCTATCATAATGAGAAGACTATGTTATGGTGCCTATTCT
261 CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTATGGTGCCTATTCT
*
96401 AGAAAAGAATGGGGATTAGTATGA-TCATTCAAGTTTGTCTGATTTAAGAGACAAACTTTGATTC
326 AGAAAAGAATGGGGATTAGTATGACT-ATTCAAGTTTGTCTTATTTAAGAGACAAACTTTGATTC
* * * * * *
96465 TAATAAAAATGTTTGAAAGAAAAGTTTTTATTGCGACACCAAAGCATCAATGTCCATGTATCCTA
390 TAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGT-CTTGTATCCTA
* * * * * *
96530 ATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAGGAATGGAGATTGTTATGAGAATTGATTC
454 AAGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTATGAGAATCGATGC
* * *
96595 TTGTCATATTTAAGGGATAAATTTTGATTTTAAGGAAAATAGGGGAAAGAAAAGATTTCCATGCA
519 TTGTCATATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGC-
* * * * * *
96660 AAAAAAAAAATCTTCAGTATCATTTTTCCTAATGAGGAAAATGTGTTTATTGTGTCTATTCACAA
583 -AAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGTATGTCTAATCACAA
* * * *
96725 AAGGAATGAAGATTTTTGCTAGAATCCATGTTTGTCTCATTTGAGGTAGGAACTTAGACTTTTCA
647 AAGGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTTCA
96790 AAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGAGA
712 AAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGAGA
* *
96855 AGACTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGACTATTTATGTTTATC
777 AGACTATGTTTATGGTGCC-AATCCTAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTC
* *
96919 TTATTTAAGAGAAAAACTTTGATTCTAACAAAAACGGTTGAAGGAAAAGCTTTTCTTGCGACACC
841 TTATTTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACC
* * ** *
96984 AAAGCATCAATGTCTTGAATTCTAATCAAGGGAATGTGTTTTTGGC
906 AAAGCATCAATGTCTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
* *
97030 TCCCAATCTTGAAAAGAATGGAGACTATTACTAGAATCAATGCTCGCCTTATTTAAAGGATGAAC
1 TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAAC
*
97095 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCAAGCAAAAGAAAATCATCAATATCATT
66 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATT
* *
97160 TATCCTATTAAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGAA
131 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGAA
* * *
97225 TGCTTGTTTGACTTATTTGAGGCACGAACTTGGACTTTTCAAAAAATGGTGGGAAGAAAGCATTT
196 TGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCTTT
* *
97290 CTTACGAAACCAAAGCATCAATATCGTCTACCCTAATGAGAAGACTATGTTATGGTGCCTATTCT
261 CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTATGGTGCCTATTCT
* * * *
97355 AGTAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTGATTTAAGAGACAAACATTGATTCC
326 AGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAGAGACAAACTTTGATTCT
* * * * *
97420 AACAAAAACGGTTGAAAGAAAAGCTTTTATTGTGACACCAAAGCATCAATGTCATGCATCCTAAT
391 AACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAAA
*** * * * * *
97485 GAACAAAATGTGTTTTTGGTTCCCAATCTGGAAAGGAATGGAGATTGTTATGAGAATCGATTCTT
456 GAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTATGAGAATCGATGCTT
*
97550 GTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAA
521 GTCATATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAA
* * *
97615 AGAACATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGTGTGTCTAATCACAAAAAG
586 AGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGTATGTCTAATCACAAAAGG
* * * *
97680 AATAAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCTCGAACTTAGACTTTCCAGAAA
651 AATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTTCAAAAA
* * * *** *
97745 TTAGTAGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATGTTGCCTATCCTAATGAGAAGAC
716 TTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGAGAAGAC
* *
97810 AATGTTTATGGTGCCTAAT-CTGGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTAT
781 TATGTTTATGGTGCC-AATCCTAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTAT
* *
97874 TTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAACAAAAGCTTTTCTTACGACACCAAAG
845 TTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAG
* **
97939 CATCAATGTCTTGTATCCTAAAAAAGGGAATGTAATTTTGGT
910 CATCAATGTCTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
* *
97981 TCCCAATCTTGAAAAGAATGGAGACTGA-TCCGACAATCAATGCTTGCCTTATTTAAAGGATGAA
1 TCCCAATCTTGAAAAGAATGGAGACT-ATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAA
* *
98045 CTTTGATTTTATGGAAAATAGGGCAAAGAAAATATTTTCATGCAAAAGAAAATCATCAATATCAT
65 CTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCAT
* *
98110 TTATCCTAATGAAGAAAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGA
130 TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGA
* *
98175 ATGCTTGTTTGACATATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCATT
195 ATGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCTT
98240 TCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTATGGTGCCTATTC
260 TCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTATGGTGCCTATTC
* *
98305 TAGAAAAGAATGGGAAGAATGTTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAGT
325 TAGAAAAGAAT-----G---G----GG------A--TT----AGTAT---GACTATT-C-A-AGT
* * * ** * * * * *
98370 CAATGCTTACCTTACTTAAGGGATGAACTTTAATTTTAAGGAATATAA-GG--CAAAGAAAAGAT
360 --TTG--T--CTTATTTAAGAGACAAACTTTGATTCTAA-CAA-A-AACGGTTGAAAGAAAAGCT
* * * * ** * * * * * *
98432 TTCCATGCAAAAGAAAATCATTAATATCATT-TATCCTAATG-AGGAGAATGTGTTTATT-GTGC
416 TTTCTTGCGACACCAAAGCATCAATGTC-TTGTATCCTAAAGAAGG-GAATGTATTT-TTGGTTC
* * * * * * * * *
98494 CTAATCATGAAATGAATGAAGA-TCATTACT-AGAATCCATG-TTG-GACTCATTT-GAGGCACG
478 CCAATCTTGAAAAGAATGGAGACT-GTTA-TGAGAATCGATGCTTGTCA-T-ATTTAAAGG-ATG
* * * ** * * * * ** * *
98554 AACTTAGA-CTTAACAAAAAT-TGG-AAGGAAGAAAGCCTTTCC-TACAAAATCAAAGCATCAAT
538 AATTTTGATTTTAAGGAAAATAGGGCAAAG-A-AAAG-ATTTCCATGCAAAAGAAAATCATCAGT
** * * * * * * * *
98615 ATTGTCTATCCTAATGA-GAAGACTATGTTTA-TGGTGCCTAATC-CTGGAAA-GACT-AGGGAT
600 ATCATTTATCCTAATGAGGAA-AATGTGTTTAGT-ATGTCTAATCAC--AAAAGGAATGA-AGAT
* *
98675 -TGTTA-T-GACTATTCATGTTTGTCAT-ATTTAAGAGAGCA--AACTTTGA-TTCTATCAAAAA
660 CT-TTACTAGA--ATCCATGTTTGTC-TCATTT--GAG-GCACGAACTTAGACTT-T-TCAAAAA
* ** * * * ** * * * *
98733 -CGGTGAAAAAAAAAGCTTTTCTTGCGACTCCAAAACATCAATGTCATGTATCATAATGCAGAAA
716 TTGGTG-GGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATG-AGAAG
* * * * * * * *
98797 AC-GTGTTCT-TGGTTCCCAAT-CTTGAAAAGAATGGAGACT-GT-T-ACAAGAATCGATGCTTG
779 ACTATGTT-TATGG-TGCCAATCCTAGAAAAGAATGGGGATTAGTATGAC--TATTC-ATGTTTG
* * ** * * * * *
98856 TCATATTTAAGGGATTAATTTTGATTTTAAGGAAAATA-GG--GCAAAGAAAAGATTTTCATGC-
839 TCTTATTTAAGAGACAAACTTTGATTCTAA-CAAAA-ACGGTTG-AAAGAAAAGCTTTTCTTGCG
* ** *** * * * *
98917 AAAGGAAAATTGTCAATATCATT-TATCCTTATG-AGGAGAATGTGTTTATGGT
901 ACA-CCAAAGCATCAATGTC-TTGTATCCTAAAGAAGG-GAATGTGTTTTTGGT
* * ** * * * * *
98969 GCCTAATC-ACAAAATGAATGAAGA-TCATTACTAGAATGC-ATGTTTGAAC-T-TTT-GAGGCA
1 TCCCAATCTTGAAAA-GAATGGAGACT-ATTACGAGAAT-CAATGCTTG-CCTTATTTAAAGG-A
* * * * * ** * ** * * ** * *
99028 CGAACTTAGACTTTCCAA--AAATTGGGGGGAAGAAAGCT-TTT-TTTGCGACACCAAAGCATTA
61 TGAACTTTGA-TTT-TAAGGAAAATAGGGCAAAGAAA-ATATTTCCATGCAAAAGAAAATCATCA
* * * * * * * * ** ** ** *
99089 ACATCATGTATCCTTATGAGAAGACTATATTTTTCTTGCCTAATTCTGAAAAT-AATGGGGATTA
123 ATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA-TCACAAAATGAATGAAGATCA
* * * * * * * ** * *
99153 -GTAT-GACTATTCATGTTTGTCTTATTTAAGACATAAACTTTGA-TTCTATCAAAAA-TGGTTG
187 TTTCTAGA--ATGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTT-T-TCAAAAATTGGTGG
* * * * * * * * * *
99214 AAAGAAAAGCTTTTCTTGCGACACCAAGGCATCAATGTCATGTACCCTAATGA-AAGAATGTGTT
248 GAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATG-T
* * * * * * ** * * * * * *
99278 TTTGGTTCCCAATCTTGAAAAGAAAGAAGACTA-TTTAGA-GAATCAATGCTTGCCTTATTTAAG
311 TATGGTGCCTATTCTAGAAAAGAATGGGGATTAGTAT-GACTATTCAA-GTTTGTCTTATTTAAG
* ** * * * ** * * * ** *
99341 TGATGAACTTTGATTTTAAGGAAAATA-GG--GCAAAGGAAATATTTTCATGCAAAAGAAAATCA
374 AGACAAACTTTGATTCTAA-CAAAA-ACGGTTG-AAAGAAAAGCTTTTCTTGCGACACCAAAGCA
* * * * * * * * *** *
99403 TCAATATCATT-TACCCTAATG-AGGAGAATGTGTTTATCGTGCCTAA-CCACAAAATGAATGAA
436 TCAATGTC-TTGTATCCTAAAGAAGG-GAATGTATTTTTGGTTCCCAATCTTGAAAA-GAATGGA
* * * ** * * * * *
99465 GATCAT-TTCT-AAAATCTATATTTATC-TCATTT-GAGGCACGAACTTAT-ATATTATA--AAA
498 GA-C-TGTTATGAGAATCGATGCTTGTCAT-ATTTAAAGG-ATGAA-TTTTGATTTTA-AGGAAA
* ** * * ** * * * *
99523 ATTGGTGTGAAG-AAAGCCTTT-CTTGCGAAACCAAAGT-ATCAATATCATGTATCCTTATGA-G
557 ATAGG-GCAAAGAAAAG-ATTTCCATGC-AAAAGAAAATCATCAGTATCATTTATCCTAATGAGG
* * ** * * * * * * * * ** *
99584 AGGACTAAGCTTA-TGGTGCCTAGTC-CTGAAAA-G-ATTACGGAT-TAGTACGACTATTCATGT
619 A-AAATGTGTTTAGT-ATGTCTAATCAC--AAAAGGAATGA-AGATCT-TTACTAGAATCCATGT
* * * * * *
99644 TTGTCTTATTTTGGAGGCA--AACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTTTCT
678 TTGTCTCA-TTT-GAGGCACGAACTTAGACTT-T-TCAAAAATTGGTGGGAAG-AAAGCCTTTCT
* * * * * * * * * * * *
99705 TACGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGAAT-TGTATTCTTGGTTCCTATTC
738 TGCAAAACCAAAGCATCAATATCATCTATCATAATGAGAAGACTATGT-TT-ATGGTGCCAATCC
* * * * * * * ** ** *
99768 TCGAAAAGAATGGAGACT-GTTACGA-GAATCGGA-GCTTGTCAAATTTAA-AGGATGAATTTTG
801 TAGAAAAGAATGGGGATTAG-TATGACTATTC--ATGTTTGTCTTATTTAAGA-GACAAACTTTG
* ** * ** ** * * * **
99829 ATTTTAGGGAAAATAAGG--CCAAGAAAAAG----AATGGGGATTA-GTAAGACTATTC-ATGT-
862 ATTCTA-ACAAAA-ACGGTTGAAAG-AAAAGCTTTTCTTGCGA-CACCAAAG-C-A-TCAATGTC
* *** * **** *
99885 TTG--TCTTATTTAAGAG-AT-AAACTTTGAT
920 TTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
* * * * * * *
99913 TCTAACAAAAACGGTTG-AAAGAA--AAG-CT-TTTCTTGCGACATCAAAGCATTAATGTCATAT
1 TC---C-CAATC--TTGAAAAGAATGGAGACTATTAC--GAGA-ATCAATGC--T--TG-CCT-T
* * * ** * *
99973 ATCCTAAGGAAGGGAATGTATTCTTGGATCCCAATTCTAA--AACGAATAGAGACTGTTACGAGA
51 AT--TTA--AA-GG-ATG-A-ACTTTGAT-----TT-TAAGGAA--AATAG-G---GCAAAGAAA
* *** *** * * * **** * **
100036 ATCGATGTT---TGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAAGGCAAGGAAAAT
96 AT--AT-TTCCATG-CAAAAGAAAATCATCAA-TATCA-TTT-ATCCTAATGAGG--A-GAATGT
* ** * * * * * * * *
100098 ATTTCCA-TG-C-AA-AAGAAAAT-AATAAATATCATTTATCCTAATGAAGAGAATTGCGTAATC
151 GTTTATAGTGCCTAATCACAAAATGAATGAAGATCA-TT-T-CT-A-GAA-TG-CTT--GT-TTG
** * * * *
100158 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGACCATAGACAT
206 AC-TTAT--TTG-AG-GC---AC--GAA--C---TTAGACT--TTT------C-A--A-A-A-AT
* *** * ***** * * * * * *
100223 T-ATAAAAATTTGTGGGAAGAAAGCCTTTTTTTGCAAAAGCAAAGCTTCAATATTGTGTATCCTT
242 TGGTGGGAA------GAAAGCCTTTC-----TTGCGAAACCAAAGCATCAATATCGTCTATCCTA
* * * * * *
100287 ATGGGAAGACTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGAATAATTTGACTATTCATG
296 ATGAGAAGACTATG-TTATGGTGCCT-ATTCTAGAAAAGAATGGGGATTAGTATGACTATTCAAG
* ** *
100351 TTTGTCTTATTTAACAGACAAACTTTGATTCTATA-AAAAATAGTTGAATGAAAAGGC-TTTCTT
359 TTTGTCTTATTTAAGAGACAAACTTTGATTCTA-ACAAAAACGGTTGAAAGAAAA-GCTTTTCTT
** * *
100414 GCGACACCAAAGCATCAATGTCAAGTATCCTAACGAAGGGAATGTATTCTTGGTTCCCAATCTTG
422 GCGACACCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGAATGTATTTTTGGTTCCCAATCTTG
* * * *
100479 AAAAGAATGGAAACTGTTATGAGAAT-GATGTTTGTCATATTTAAGGGATAAATTTTGATTTTAA
487 AAAAGAATGGAGACTGTTATGAGAATCGATGCTTGTCATATTTAAAGGATGAATTTTGATTTTAA
* * * * * * *
100543 GGAAGATAGGGCAAAGTAGAGATTTTCATGCAAAA-AAAATCATCAATATCATTTATCTTAATAA
552 GGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAGTATCATTTATCCTAATGA
* * * * * * * *
100607 GGAGACTGTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGA
617 GGAAAATGTGTTTAGTATGTCTAATCACAAAAGGAATGAAGATCTTTACTAGAATCCATGTTTGT
* * * * ** *
100672 CTCATTTGAGGCGCGAACTTAGACATTACAAAAATTGGTGGGAATAAAGCCTTTCTTGTGAAACA
682 CTCATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACC
* * * * *
100737 AAAGCATCAATATCATGTACCCTTATGAGAAGACTATGTTTACGGTGCCTAATCCTA-AAAAGAA
747 AAAGCATCAATATCATCTATCATAATGAGAAGACTATGTTTATGGTGCC-AATCCTAGAAAAGAA
* *
100801 TGGGGATTAGTATGACTATTAATGTTTGTCTTATTTAAAAGACAAACTTTGATTCTAACAAAAAC
811 TGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAACAAAAAC
* * * *
100866 GGTAGAAAGAAAAGCTTTTTTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
876 GGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGAAT
100931 GTGTTTTTGGT
941 GTGTTTTTGGT
* * * * * * *
100942 TCCCAATCTTGAAAGGAATGGAGACTGTTATGAGAATCGATGCTTGTCATATTTAAGGGATGAA-
1 TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAAC
* * *
101006 TCTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAATAGAAAATCACCAATATCAT
66 T-TTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCAT
* * * *
101071 TTAT-CTGAATGAGGAGAATGTGTTTATTGTGTCTAATCACAAAAGGAATGAAGATCATTACTAG
130 TTATCCT-AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAG
* * * * * * * * * *
101135 AATCCATGTTGGACTTTTTTGAGGCAAGAACATAGACTTTACGAAAATTGGAGGGAGGAAAGCCT
194 AATGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCT
* * * * *
101200 TTCCTGTGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAGGACTATATTTATGGTGCCTAA
259 TTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTAT-GTTATGGTGCCTAT
** * * * * * *
101265 TAGAAAAAAAAATGGGGATTACTATGACTATTCATGTTTATCTTATTTATGAGACAAACTTTGAT
323 TCTAGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAGAGACAAACTTTGAT
* * ** * * **
101330 TCTATCAAAAACGGTGGAAAGAATGGCTTTTCTTGCAATC-CCAAAGCATCAGTGTCACGTATCC
388 TCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGA-CACCAAAGCATCAATGTCTTGTATCC
* * * **
101394 TAATA-AAGGGAATATGTTTTTGGTTCCCAATCTTGAAAAAAAATGGAGACTGTTGCGAGAATCT
452 TAA-AGAAGGGAATGTATTTTTGGTTCCCAATCTTG-AAAAGAATGGAGACTGTTATGAGAATC-
* * * * * *
101458 G-TGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAAGGCAAAAAAAAGATTTCC
514 GATGCTTGTCATATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCC
* * * * *
101522 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGTTTAATCA
579 ATGCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGTATGTCTAATCA
* * * *
101587 CAAAAGGAATGAAGATCATTACTAGAATCCATGTTGGACTCATTTGAGGCACAAACTTAGACTTT
644 CAAAAGGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTT
* * * * * * * *
101652 ACAAAAATAGAG-AGGAAGAAAGCCTTTCATTGCGAAGCCAAAGCATTAGTATCATCTATCCTAA
709 TCAAAAATTG-GTGGGAAGAAAGCCTTTC-TTGCAAAACCAAAGCATCAATATCATCTATCATAA
* * * * *
101716 TGAAAAGACTATGTTTATAGTGCCTAA-CCCAGAAAAGACTAGGGATT-GTTATGACTATTCATG
772 TGAGAAGACTATGTTTATGGTGCC-AATCCTAGAAAAGAATGGGGATTAG-TATGACTATTCATG
* * * * *
101779 TTTATCTTATTTAAGAGGGCAAACTTTGTTTCTATCAAAAACGG-TGAAAAAAAAGCTTTTCTTG
835 TTTGTCTTATTTAAGA-GACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTG
* * * *
101843 CGACACC-AAGCATCAATGTCATCTATCCTAATGAAGAGAATGTG-TTTTGGT
899 CGACACCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
* * * * * * * *
101894 TCCTAATCTTGAAAAGAATGGAGACTATTACGAGAATCGATACTTGTCATA-TTAAGGGATTAAT
1 TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAAC
* * * * **
101958 TTTGATTTT-TGGAAAATAGGGCAAAGAAAAGATTTTCGTGCAAAAGAAAATTGTCAATATCATT
66 TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATT
* * * * *
102022 TATCCTAATGTGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATAAAGATCATTACGAGAA
131 TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGAA
* * *
102087 TGCATGTTTGAC-----T-----------TT---C----CAAAAATTGGTAGGAAGAAAGCTTTT
196 TGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCTTT
* * * ** * * * * * *
102129 TTTGCGACACCAAAGTATCAGCATCATGTATCCTTATGAGAAGACTATGTTTTTTGTGCCTACTC
261 CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATG-TTATGGTGCCTA-TT
* * * *
102194 CT-GAAAATAATGGGGATTAGTATGACTATT-TATTGTTGTCTTATTTAAGACACAAACTTTGAT
324 CTAGAAAAGAATGGGGATTAGTATGACTATTCAAGT-TTGTCTTATTTAAGAGACAAACTTTGAT
* * * *
102257 TCTATCAAAAATGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTACCCT
388 TCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCT
* * * * * * * *
102322 AATGAAAGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAAAGGAAACTATT-TAGAGAATCAAC
453 AAAGAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTAT-GAGAATCGAT
* * * * * *
102386 GTTTGCCTTATTT-AAGTGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAATATTTCCAT
517 GCTTGTCATATTTAAAG-GATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCAT
* * * * * * *
102450 GTAAAAGAAAATCATCAATATCATTTACCCTAATAAGGAGAATGTGTTTA-TCGTGCCTAATCAC
581 GCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGT-ATGTCTAATCAC
* *** * * *
102514 AAAATGAATGAAGATCATTT-CTAGAAAATATATTTATCTCATTTGAGGCATGAACTTAGA-TAT
645 AAAAGGAATGAAGATC-TTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACT-T
* * * * *
102577 TAT-AAAAATTGGTGGGAAGAAAGCTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTA
708 T-TCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAA
* * * * * *
102641 TGAGAGGACTAAGCTTATGGTGCCTAATACT-GAAAAGATTAGGGATTAGTATGACTATTCATGT
772 TGAGAAGACTATGTTTATGGTGCC-AATCCTAGAAAAGAATGGGGATTAGTATGACTATTCATGT
* ** *
102705 TTGTCTTATTTAGGAGACAAACTTTGATTCTGTCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCA
836 TTGTCTTATTTAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCG
102770 ACACCAAAG
901 ACACCAAAG
102779 TGAAAGCTCA
Statistics
Matches: 10448, Mismatches: 1533, Indels: 879
0.81 0.12 0.07
Matches are distributed among these distances:
924 24 0.00
925 125 0.01
926 209 0.02
927 205 0.02
931 1 0.00
934 1 0.00
944 5 0.00
945 6 0.00
946 5 0.00
947 15 0.00
948 26 0.00
949 300 0.03
950 1276 0.12
951 4602 0.44
952 960 0.09
953 500 0.05
954 675 0.06
955 37 0.00
956 2 0.00
957 3 0.00
958 1 0.00
959 2 0.00
960 7 0.00
961 6 0.00
962 4 0.00
963 9 0.00
966 1 0.00
967 8 0.00
969 5 0.00
970 1 0.00
971 2 0.00
972 3 0.00
973 5 0.00
974 6 0.00
975 14 0.00
976 16 0.00
977 3 0.00
978 13 0.00
979 6 0.00
980 5 0.00
981 13 0.00
982 1 0.00
983 5 0.00
984 8 0.00
985 23 0.00
986 194 0.02
987 249 0.02
988 185 0.02
989 29 0.00
990 7 0.00
991 1 0.00
992 1 0.00
994 11 0.00
995 4 0.00
996 5 0.00
997 9 0.00
998 13 0.00
999 14 0.00
1000 7 0.00
1001 12 0.00
1002 2 0.00
1003 1 0.00
1004 2 0.00
1005 8 0.00
1006 2 0.00
1007 2 0.00
1008 1 0.00
1009 1 0.00
1010 1 0.00
1011 5 0.00
1012 2 0.00
1013 4 0.00
1014 7 0.00
1015 2 0.00
1017 2 0.00
1019 7 0.00
1020 1 0.00
1021 5 0.00
1022 15 0.00
1023 119 0.01
1024 160 0.02
1025 159 0.02
1026 33 0.00
1027 11 0.00
1028 4 0.00
1029 7 0.00
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (951 bp):
TCCCAATCTTGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAAGGATGAAC
TTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATT
TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTTCTAGAA
TGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAAGCCTTT
CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTATGGTGCCTATTCT
AGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAGAGACAAACTTTGATTCT
AACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAAA
GAAGGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTATGAGAATCGATGCTT
GTCATATTTAAAGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAA
AGAAAATCATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTAGTATGTCTAATCACAAAAGG
AATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACTTTTCAAAAA
TTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGAGAAGAC
TATGTTTATGGTGCCAATCCTAGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATT
TAAGAGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGC
ATCAATGTCTTGTATCCTAAAGAAGGGAATGTGTTTTTGGT
Found at i:91762 original size:317 final size:313
Alignment explanation
Indices: 89537--98317 Score: 1739
Period size: 317 Copynumber: 27.7 Consensus size: 313
89527 AAAAGAAAAT
89537 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA-GAATGAAG
* *
89602 ATCATTTCTAGAATGCTTGTTTGACTTATTTGAGGCACGAATTTAGACTTTTCAAAAATTGGTGG
65 ATCATTTCTAGAATGCTTGTTTGACTTATTTAAGGCACGAACTTAGA-TTTTCAAAAATTGGTGG
* *
89667 GAAG-AAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTACCCTAATGAGAAGACTATGTT
129 GAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAA-AATATGTT
** * * * * *
89731 ATGGCACCT-ATTTTAGAAAAGATTGGGGACTAGTATGACAATTCAAGTTTGTCTGATTTAAGAG
193 ATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTATG--AATTCATGTTTGTCTTATTTAAGAG
* *
89795 ACCAACTTTGATTCTAACAAAAATGGTTGAAAGAAAAGCTTTTCTTGA-GATAA-CAAAG
256 ACGAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTT-ACGA-AACCAAAG
* ** * * * * * * **
89853 CATCAATGTC-TTGTATCCTAAACAAGG-GAATGTCTTTTTGGTTCCCATTCTTGAAAAGAATGG
1 CATCAATATCATT-TATCCT-AATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAAGAAT-G
* ** * * * *
89916 AA-A-CTATTT-TGAGAATCGAC--GTTTGTCAAATTTAAGAG-ATGAATTTTGATTTTAAGGAA
62 AAGATC-ATTTCT-AGAAT-G-CTTGTTTGACTTATTTAAG-GCACGAACTTAGATTTTCA--AA
* ** * * ** * * * *
89975 AATAGG-GCAAAGAAAAG-ATTTCCATGCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGG
120 AATTGGTGGGAAGAAAAGCATTT-CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGA-G
* ** * * * * *
90038 AAAATGTGTTTATTATGTCTAA--TTACAAAAGGAATGAAGATCT-TTACTGGAATCCATGTTTG
183 AAAATATG-TTATGGTGCCTAATCTTAGAAAA-GAATGGAGA-CTAGTA-T-GAATTCATGTTTG
* * ** * * * * * ** * * *
90100 TCTCATTTGAGTTAGGAACTTAGACTT-T-TCAAAAATTGGTGGCGAG-AAAGCCTTTCTTGCAA
243 TCTTATTTAAGAGACGAACTTTGA-TTCTAACAAAAA-CGGTTGAAAGAAAAGCTTTTCTTACGA
90162 AACCAAAG
306 AACCAAAG
* * * * * * * *
90170 CATCAATATCGTCTATCATAATGA-GATGACTATGTTTATGGTGCCAAATC-CTGAAAAGAATGG
1 CATCAATATCATTTATCCTAATGAGGA-GAATGTGTTTATAGTGCCTAATCAC--AAAAGAATGA
* * * * * * ** * *
90233 GGATTA-GTAT-GACTATTCATGTTT-ATCTTATTTAAGAG-AAAAACTTTGATTCTAACAAAAA
63 AGATCATTTCTAGA--ATGCTTGTTTGA-CTTATTTAAG-GCACGAACTTAGATT-T-TCAAAAA
* * * * * * * * **
90294 -CGGT-TGAAGGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAATCAAGGG
122 TTGGTGGGAA-GAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAAT-GAGAA
* * * * * * * *
90357 AATGTGTTTTTG-GCTCTCAATCTT-GAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCT
185 AATATGTTATGGTGC-CT-AATCTTAGAAAAGAATGGAGACTAGTATGA-ATTC-ATGTTTGTCT
** * * ** * * * *
90420 TATTTAA-AGGATAAACTTTGATTTTAAGGAAAATA-GG--GCAAAGAAAATATTTCCATGCAAA
246 TATTTAAGA-GACGAACTTTGATTCTAA-CAAAA-ACGGTTG-AAAGAAAAGCTTTTCTTACGAA
** *
90481 AGAAAAT
307 ACCAAAG
90488 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA-GAATGAAG
*
90553 ATCATTTCTAGAATGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGG
65 ATCATTTCTAGAATGCTTGTTTGACTTATTTAAGGCACGAACTTAGA-TTTTCAAAAATTGGTGG
* *
90618 GAAG-AAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTACCCTAATGAGAAGACTATGTT
129 GAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAA-AATATGTT
* * * * * *
90682 ATGGCGCCT-ATTTTAGAAAAGATTGGGGACTAGTATGACAATTCAAGTTTGTCTGATTTAAGAG
193 ATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTATG--AATTCATGTTTGTCTTATTTAAGAG
* * * *
90746 ACCAACTTTGATTCTAACAAAAACGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAG
256 ACGAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGAAACCAAAG
* * * * * * * * **
90804 CATCAATGTC-TTGTATCCTAAAGAAGG-GAATGTCTTTTTGGTTCCCACTCTTGAAAAGAATGG
1 CATCAATATCATT-TATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATC-ACAAAAGAAT-G
* * ** * * * * *
90867 AA-A-C-TGTTTTGAGAATCGAC--GTTTGTCAAATTTAAGGGATGAATTTTGATTTTAAGGAAA
62 AAGATCAT-TTCT-AGAAT-G-CTTGTTTGACTTATTTAAGGCACGAACTTAGATTTTCA--AAA
* ** * * ** * * * *
90927 ATAGG-GCAAAGAAAAG-ATTTCCATGCAAAAGAAAATCATCAGTATCATTTATCCTAATGAGGA
121 ATTGGTGGGAAGAAAAGCATTT-CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGA-GA
* ** * * * * *
90990 AAATGTGTTTATTATGTCTAA--TTACAAAAGGAATGAAGATCT-TTACTGGAATCCATGTTTGT
184 AAATATG-TTATGGTGCCTAATCTTAGAAAA-GAATGGAGA-CTAGTA-T-GAATTCATGTTTGT
* * * * * * ** * ** * * *
91052 CTCATTTGAGATAGGAACTTAGACTT-T-TCAAAATTTGGTGGGGAG-AAAGCCTTTCTTGCAAA
244 CTTATTTAAGAGACGAACTTTGA-TTCTAACAAAA-ACGGTTGAAAGAAAAGCTTTTCTTACGAA
91114 ACCAAAG
307 ACCAAAG
* * * * * * * **
91121 CATCAATATCATCTATCATAATGAGAAGACTATGTTTATGGTGCCAAATC-CTGAAAAGAATGGG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC--AAAAGAATGAA
* * * * * ** * *
91185 GATTA-GTAT-GACTATTCATGTTT-ATCTTATTTAAGAG-AAAAACTTTGATTCTAACAAAAA-
64 GATCATTTCTAGA--ATGCTTGTTTGA-CTTATTTAAG-GCACGAACTTAGATT-T-TCAAAAAT
* * * * * * * * **
91245 CGGT-TGAAGGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAATCAAGGGA
123 TGGTGGGAA-GAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAAT-GAGAAA
* * * * * * *
91309 ATGTGTTTTTG-GCTCTCAATCTT-GAAAAGAATGGAGACTA-TCACGAGAATCAATGCTTGCCT
186 ATATGTTATGGTGC-CT-AATCTTAGAAAAGAATGGAGACTAGT-ATGA-ATTC-ATGTTTGTCT
* * * * *
91371 TATTTAATG-GATGAACTTTGATTTTAAGGAAAATA-GGGT-AAAGAAAA--TATTTC-CACGCA
246 TATTTAA-GAGACGAACTTTGATTCTAA-CAAAA-ACGGTTGAAAGAAAAGCT-TTTCTTACG-A
** *
91430 AATGAAAAT
306 AA-CCAAAG
91439 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA-GAATGAAG
*
91504 ATCATTTCTAGAATGCTTGTTTGACTTATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGG
65 ATCATTTCTAGAATGCTTGTTTGACTTATTTAAGGCACGAACTTAGA-TTTTCAAAAATTGGTGG
* *
91569 GAAG-AAAGCCTTTCTTGC-ATAACCAAAGCATCAATATCGTCTATCCTAGTGAGAAAACTATGT
129 GAAGAAAAGCATTTCTTGCGA-AACCAAAGCATCAATATCGTCTATCCTAATGAGAAAA-TATGT
* * * * *
91632 ATATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAA
192 -TATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTATGA--ATTCATGTTTGTCTTATTTAAG
* * *
91696 AGACAAACTTTGATTCTCACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGACACCAAAG
254 AGACGAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGAAACCAAAG
* * * * * * *
91756 CATCAATGTC-TTGTATCCTAAAGAAGG-GAATGTACTTT-TGGTTCCCAAT-ATTGAAAAGAAT
1 CATCAATATCATT-TATCCTAATG-AGGAGAATGT-GTTTATAGTGCCTAATCA--CAAAAGAAT
* * * * * * * * *
91817 GGAGA-C-TGTTACGACAAT-CAATGCTTGCCTTATTTAAAGG-ATGAACTTTGATTTTAAGGAA
61 GAAGATCAT-TT-CTAGAATGC-TTGTTTGACTTATTT-AAGGCACGAACTTAGATTTTCA--AA
** ** * * ** * * * * *
91878 AATAAG-GCAAAGAAAA-TATTTCCATGC-AAATGAAAATCATCAATTTCATTTATCCTGATGAG
120 AATTGGTGGGAAGAAAAGCATTT-CTTGCGAAA-CCAAAGCATCAATATCGTCTATCCTAATGA-
* * * * * * * * * *
91940 GAGAATGTGTT-TGGAGAGCCTAATC--ACAAAATAAATGAATATCATTTGTA-GAATGCTTGTT
182 GAAAATATGTTAT-G-GTGCCTAATCTTAGAAAA-GAATGGAGA-C--TAGTATGAATTCATGTT
** * * * * * *
92001 TGAATTATTTGAG-GCACGAACTTAGACTT-T-TCAAAAATTGGCGTG-AAG-AAAGCCTTTCTT
241 TGTCTTATTTAAGAG-ACGAACTTTGA-TTCTAACAAAAA-CGG-TTGAAAGAAAAGCTTTTCTT
**
92061 GTGAAACCAAAG
302 ACGAAACCAAAG
* * * * * * *
92073 CATCAATAGCATCTATCCTAATGAGAAGACTATG-TTATA-TCGCCTATTCTAGAAAAGAATTG-
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT-GCCTAATC-ACAAAAGAA-TGA
* ** * ** * * * * *
92135 GGA-C--TAGTATGACTATTCAAGTTTGTCTGATTTAAGAG-ACAAACTTTGATTCTAACAAAAA
63 AGATCATTTCTA-GA--ATGCTTGTTTGACTTATTTAAG-GCACGAACTTAGATT-T-TCAAAAA
* * * * * * * * * * **
92196 -CGATTGAAAGAAAAGCTTTTCTTGCGATACCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGA
122 TTGGTGGGAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATG-AGAAA
* * * * * * * * * **
92260 ATGTCTTTTTGGTTCCCACTCTT-GAAAAGAATGGAAACTATTATGAGAATCGATGTTTGTCAAA
186 ATAT-GTTATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTATGA-ATTC-ATGTTTGTCTTA
* * * * * ** * * * * * **
92324 TTTAAGGGATGAATTTTGATTTTAAGGAAAATA-GG-ACAAAGAAAAGATTTCCATGCCAAAAAA
248 TTTAAGAGACGAACTTTGATTCTAA-CAAAA-ACGGTTGAAAGAAAAGCTTTTCTTACGAAACCA
*
92387 AAT
311 AAG
* * * *
92390 CATCAGTATCATTTATCCTAATGAGGAAAATGTGTTTATTGTGTCTAATCACAAAAGGAATGAAG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA-GAATGAAG
* ** * * * * * *
92455 ATC-TTTACTATAACCCATGTTTGTCTCATTTGAGGCAAGAACTTAGACTTTTCAGAAATTGGTG
65 ATCATTT-CTAGAATGCTTGTTTGACTTATTTAAGGCACGAACTTAGA-TTTTCAAAAATTGGTG
* * * * *
92519 GGGAG-AAAGCCTTTCTTGCAAAACCAAAGCATCAATATCGTCTATCATAATGAGAAGACTATGT
128 GGAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAA-AATATG-
* * * *
92583 TTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAG
191 TTATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTATGA--ATTCATGTTTGTCTTATTTAAG
* * * *
92647 AGACAAACTTTGATTCTAACAAAAACGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAG
254 AGACGAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGAAACCAAAG
* * * * * * **
92707 CATCAATGTC-TTGTATCCTAAAGAAGG-GAATGTAATTT-TGGTTCCCAATCTTGAAAAGAATG
1 CATCAATATCATT-TATCCTAATG-AGGAGAATGT-GTTTATAGTGCCTAATC-ACAAAAGAATG
* * * * * * * * *
92769 GAGA-CTATTACGAGAAT-CAATGCTTGCCTTATTTAAAGG-ATGAACTTTGATTTTAAGGAAAA
62 AAGATC-ATTTCTAGAATGC-TTGTTTGACTTATTT-AAGGCACGAACTTAGATTTTCA--AAAA
* ** * ** ** ** * * * * * *
92831 TAGG-GCAAAGAAAA-TATTTCCAAGAAAAAGAAAATCATCAATTTCATTTATCCTGATGAGGAG
122 TTGGTGGGAAGAAAAGCATTT-CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGA-GAA
* * * * * * * * * *
92894 AATGTGTT-TGGAGTGCCTAATC--ACAAAATAAATGAATA-TTGTTTCTAGAATGCTTGTTTGA
185 AATATGTTAT-G-GTGCCTAATCTTAGAAAA-GAATGGAGACTAG--TAT-GAATTCATGTTTGT
* * * * * * * * *
92955 CTTATTTGAG-GAACAAACTTAGACTT-T-TCAAAAATTGGTGGGAAG-AAAGCCTTTCTTGCGA
244 CTTATTTAAGAG-ACGAACTTTGA-TTCTAACAAAAA-CGGTTGAAAGAAAAGCTTTTCTTACGA
93016 AACCAAAG
306 AACCAAAG
* * * * * * * * **
93024 CATCAATATCATCTATCATAATGAGAAGACTATG-TTATGGTGCCTATTCTAGAAAAGAATGGGG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAAGAATGAAG
* * * * ** * * * * * * * *
93088 ATTA-GTAT-GACCATTCAAGTTTGTCTGATTTAAGAG-ACAAACTTTGATTCTAATAAAAATGT
65 ATCATTTCTAGA--ATGCTTGTTTGACTTATTTAAG-GCACGAACTTAGATTTTCA-AAAATTGG
* * * * * * * * ** *
93150 TTGAAAGAAAAGCTTTTATTGCGACACCAAAGCATCAATGTCCATGTATCCTAATGAAGGGAATG
126 TGGGAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATAT-CGTCTATCCTAATG-AGAAAATA
* * * * * * * * *
93215 TGTTTTTGGTTCCCAATCTT-GAAAAGAAAGAAGACTA-TTTAGAGAATCAATGCTTGCCTTATT
189 TG-TTATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTAT-GA-ATTC-ATGTTTGTCTTATT
* * * * * ** * * * **
93278 TAAGTGATGAACTTTGATTTTAAGGAAAATA-GG--GCAAAGGAAATATTTTCATGCAAAAGAAA
250 TAAGAGACGAACTTTGATTCTAA-CAAAA-ACGGTTG-AAAGAAAAGCTTTTCTTACGAAACCAA
*
93340 AT
312 AG
* * * *
93342 CATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATCGTGCCTAACCACAAATGAATGAAGA
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAGAATGAAGA
* * * *
93407 TCATTTCTAAAAT-CTATATTT-ATCTCATTTGAGGCACGAACTTAGATATTAT-AAAAATTGGT
66 TCATTTCTAGAATGCT-TGTTTGA-CTTATTTAAGGCACGAACTTAGAT-TT-TCAAAAATTGGT
* * * * * * * *
93469 GGGAAG-AAAGCCTTTCTTGCGAAACCAAAGCATTAATATCATGTATCCTTATGAGAGGACTAAG
127 GGGAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGA-AAATATG
* * *
93533 CTTATGGTGCCTAGTCCT-GAAAAGATTAT-G-GATTAGTATGACTATTCATGTTTGTCTTATTT
191 -TTATGGTGCCTAATCTTAGAAAAGA--ATGGAGACTAGTATGA--ATTCATGTTTGTCTTATTT
** * * * * *
93595 TGGAGGCAAACTTTGATTCTATCAAAAATGGTTGAAAGAAAAGCTTTTCTTACGACACCAAAG
251 AAGAGACGAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGAAACCAAAG
** * * * * * * * *
93658 CATCAATGCCATGTATCCTAATGAAG-GAAT-TGTATTCTTGGTTCCTATTCTCGAAAAGAATGG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGT-TT-ATAGTGCCTAATCAC-AAAAGAATGA
* ** * * ** * * * *
93721 AGA-C-TGTTACGAGAAT-CGGAGCTTGTCAAATTTAAAGG-ATGAATTTTGATTTTAAGGAAAA
63 AGATCAT-TT-CTAGAATGC-TTGTTTGACTTATTT-AAGGCACGAACTTAGATTTTCA--AAAA
* *** * * ** * * * *
93782 TAGG-ACAAAGAAAAG-ATTTCCATGCCAAAAAAAATCATCAGTATCATTTATCCTAATGAGGAA
122 TTGGTGGGAAGAAAAGCATTT-CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGA-GAA
* * * * * **
93845 AATATGTTTATTGTGTCTAATC--ACAAAAGGAATGAAGATCT-TTACTAGAACCCATGTTTGTC
185 AATATG-TTATGGTGCCTAATCTTAGAAAA-GAATGGAGA-CTAGTA-T-GAATTCATGTTTGTC
* * * * * ** * ** * * *
93907 TCATTTGAG-GCAGGAACTTAGACTT-T-TCAGAAATTGGTGGGGAGAAAA-CCTTTCTTGCAAA
245 TTATTTAAGAG-ACGAACTTTGA-TTCTAACA-AAAACGGTTGAAAGAAAAGCTTTTCTTACGAA
93968 ACCAAAG
307 ACCAAAG
* * * * * * * * * **
93975 CGTCAATATCGTCTATCATAATGAGAAGACTATGTTTATGGTGCCTAATC-CTGAAAACAATGGG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC--AAAAGAATGAA
* * * * * * * *
94039 GATTA-GTAT-GACTATTCATGTTT-ATCTTATTTAAGAG-ACCAACTTTGATTCTAACAAAAA-
64 GATCATTTCTAGA--ATGCTTGTTTGA-CTTATTTAAG-GCACGAACTTAGATT-T-TCAAAAAT
* *** * * * * * * **
94099 CGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGAA
123 TGGTGGGAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATG-AGAAAA
* * * * * * * * * *
94164 TGTAATTTTGGTTCCCAATCTT-GAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTAT
187 TAT-GTTATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTATGA-ATTC-ATGTTTGTCTTAT
* * * ** *
94228 TTAA-AGGATGAACTTTGATTTTAAGGAAAATA-GG--GCAAAGAAAATATTTTC--AAGAAAAA
249 TTAAGA-GACGAACTTTGATTCTAA-CAAAA-ACGGTTG-AAAGAAAAGCTTTTCTTACG--AAA
** *
94287 GAAAAT
308 CCAAAG
* * * ** *
94293 CATCAATTTCATTTACCCTGATGAGGAGAATGTGTTTGGAGTGCCTAATCACAAAATAAATGAAT
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA-GAATGAA-
* * * * *
94358 AAT-GTTTCTAGAATGCTTGTTTGACTTATTTGAGGAACGAACTTAGACTTTTTC-AAGATTGGT
64 GATCATTTCTAGAATGCTTGTTTGACTTATTTAAGGCACGAACTTAGA--TTTTCAAAAATTGGT
* *
94421 GGGAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCATAATGAGAAAACTATG
127 GGGAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAAA-TATG
* * * *
94485 TTATGGTGCCTATTC-TAGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTTATTTAAG
191 TTATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTATGA--ATTCATGTTTGTCTTATTTAAG
* * ** * * * *
94549 AGA-GAAACTTTGATTATAATAAAATTGGTTGAAAGAAAAGCTTTTATTGCGACACTAAAG
254 AGACG-AACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGAAACCAAAG
* * * * * * * * ** *
94609 CATCAATGTC-TTGTATCCTAAAGAATG-GAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGG
1 CATCAATATCATT-TATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATC-ACAAAAGAATGA
* * * * * * * *
94672 AGA-CTATTACGACAAT-CAATGCTTGCCTTATTTAAAGG-ATGAACATT-GATTTTAAGGAAAA
63 AGATC-ATTTCTAGAATGC-TTGTTTGACTTATTT-AAGGCACGAAC-TTAGATTTTCA--AAAA
* ** * * * ** * * * * *
94733 TAGG-GCAAAGAAAA-TATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTGATGAGGAG
122 TTGGTGGGAAGAAAAGCATTT-CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGA-GAA
* * * * * * * * *
94796 AATGTGTT-TGGAGTGCCTAATCATA-AAATA-AATGAATA-TTGTTTCTAGAATGCTTGTTTGA
185 AATATGTTAT-G-GTGCCTAATCTTAGAAA-AGAATGGAGACTAG--TAT-GAATTCATGTTTGT
** * * * * * * *
94857 CTTATTTGTG-GCACGAACATAGACTT-T-TCAAAAATTGGTGGGAAG-AAAGCCTTTCTTACGA
244 CTTATTTAAGAG-ACGAACTTTGA-TTCTAACAAAAA-CGGTTGAAAGAAAAGCTTTTCTTACGA
*
94918 AACCAAAA
306 AACCAAAG
* * * * * * * * **
94926 CATCAATAGCATCTATCCTGATGAGAAGACTATG-TTAT-GTCGCCTATTCTAGAAAAGAATGGG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT-GCCTAATC-ACAAAAGAATGAA
** * ** * * * * * * * **
94989 GA-C--TAGTATGATTATTCAAGTTTGTCTGAGTTAAGGGACAAACTTTGATTCT-AACAGAAAC
64 GATCATTTCTA-GA--ATGCTTGTTTGACTTATTTAAGGCACGAACTTAGATTTTCAA-A-AATT
* * * * * * * * *
95050 AGTTGAAAGAAAAGCTTTTCTTGC-AATACCAAAGCATCTATGTCTTGTATCCTAA--AGAAGGA
124 GGTGGGAAGAAAAGCATTTCTTGCGAA-ACCAAAGCATCAATATCGTCTATCCTAATGAGAA-AA
* * * * * * * * *
95112 -ATGCCTTTTTGGTTCCCACTCTT-GAAAGGAATGGAAACTATTATGAGAATCGATGTTTGTC-A
187 TATG---TTATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTATGA-ATTC-ATGTTTGTCTT
* * * * * * * * * * *
95174 AGTTTAAGGGATGAATTTTGATTTTAAGGAAAATA-GGGT-AAAGAAAAGATTTCCATGCAAAAC
247 A-TTTAAGAGACGAACTTTGATTCTAA-CAAAA-ACGGTTGAAAGAAAAGCTTTTCTTACGAAAC
* *
95237 AAAAT
309 CAAAG
* * * * *
95242 CATCAGTATCATTTATCCTAATGACGAAAATGTGTTTATTGTGTCTAATCACAAAAGGAATGAAG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA-GAATGAAG
* * * * * ** * *
95307 ATC-TTTACTAGAATCCATGTTTGTCTCATTTGAGGCATAAACTTAGACTTTTTAGAAATTGGTG
65 ATCATTT-CTAGAATGCTTGTTTGACTTATTTAAGGCACGAACTTAGA-TTTTCAAAAATTGGTG
* * * ** *
95371 GGGAG-AAAGCCTTTCTTGC-ATAACCAAAGCATCAATATCATCTATCAAAATGAGAAGACTATG
128 GGAAGAAAAGCATTTCTTGCGA-AACCAAAGCATCAATATCGTCTATCCTAATGAGAA-AATATG
* * * *
95434 TTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAA
191 -TTATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTATGA--ATTCATGTTTGTCTTATTTAA
** * *
95498 GAGATAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGC-AACACCAACG
253 GAGACGAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGAA-ACCAAAG
* * * * * * * **
95559 CATCAACATC-TTGTTTCCTAAAGAAGG-GAATGTAATTT-TGGTTCCCAATCTTGAAAAGAATG
1 CATCAATATCATT-TATCCTAATG-AGGAGAATGT-GTTTATAGTGCCTAATC-ACAAAAGAATG
* * * * * * * * *
95621 GAGA-CTATTACTTGAAT-CAATGCTTGCCTTATTTAAAGG-ATGAACTTTGATTTTAAGGAAAA
62 AAGATC-ATTTCTAGAATGC-TTGTTTGACTTATTT-AAGGCACGAACTTAGATTTTCA--AAAA
* ** * ** * ** * * * * * *
95683 TAGG-GCAAAGAAAA-TATTTCCAAGCAAAAGAAAATCATCAATTTCATTTATCCTGATGAGGAG
122 TTGGTGGGAAGAAAAGCATTT-CTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGA-GAA
* ** * * * * * * *
95746 AATGTGTT-TGGAGTGCCTAATCCCA-AAATA-AATGAATA-TCATTTCTAGAATGCTTGTTTGA
185 AATATGTTAT-G-GTGCCTAATCTTAGAAA-AGAATGGAGACT-A-GTAT-GAATTCATGTTTGT
* * ** * ** * * * **
95807 CTTATTTGAG-GCACGAACTTAGACTT-TTCCAAGATTGGTCGGAAG-AAAGCCTTTCTTGTGAA
244 CTTATTTAAGAG-ACGAACTTTGA-TTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGAA
95869 ACCAAAG
307 ACCAAAG
* * * * * * * * **
95876 CATCAATATCGTCTATCATAATGA-GAAAACTATG-TTATGGTGCCTATTCTAGAAAAGAATGGG
1 CATCAATATCATTTATCCTAATGAGGAGAA-TGTGTTTATAGTGCCTAATC-ACAAAAGAATGAA
* * * * ** * * * * *
95939 GATTA-GTAT-GACTATTTAAGTTTGTCTTATTTAAAAG-ACAAACTTTGATTATAACAAAAA-T
64 GATCATTTCTAGAATGCTT--GTTTGACTTATTT-AAGGCACGAACTTAGATT-T-TCAAAAATT
* * * * * * * * * * **
96000 AGTTGAAAGAAAAGCTTTTATTGCGACACCAAAGCATCAATGTCTTGTATCCTAAAGAAGGGAAT
124 GGTGGGAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATG-AGAAAAT
* * * * * * *
96065 GTGTTTTTGGTTCCCAATCTT-GAAAAGAATGGAGACT-GTTATGACAATCAATGCTTGCCTTAT
188 ATG-TTATGGTGCCTAATCTTAGAAAAGAATGGAGACTAG-TATGA-ATTC-ATGTTTGTCTTAT
* * * * ** * * * * **
96128 TTAA-AGGATGAACATTGATTTTAAGGAAAATA-GG--GCAAAGAAAATATTTCCATGCAAAAGA
249 TTAAGA-GACGAACTTTGATTCTAA-CAAAA-ACGGTTG-AAAGAAAAGCTTTTCTTACGAAACC
*
96189 AAAT
310 AAAG
* ** * *
96193 CATCAATATCATTTATCCTGATGAGGAGAATGTGTTTGGAGTGCCTAATCACAAAATAAATGAAT
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA-GAATGAAG
** * *
96258 ATTGTTTCTAGAATGCTTGTTTGACTTATTTGAGGCACGAACATAGACTTTTCAAAAATTGGTGG
65 ATCATTTCTAGAATGCTTGTTTGACTTATTTAAGGCACGAACTTAGA-TTTTCAAAAATTGGTGG
* * * *
96323 GAAG-AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCATAATGAGAAGACTATGTT
129 GAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAA-AATATGTT
* * * * *
96387 ATGGTGCCTATTC-TAGAAAAGAATGGGGATTAGTATGATCATTCAAGTTTGTCTGATTTAAGAG
193 ATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTATGA--ATTCATGTTTGTCTTATTTAAGAG
* * * * * * * *
96451 ACAAACTTTGATTCTAATAAAAATGTTTGAAAGAAAAGTTTTTATTGCGACACCAAAG
256 ACGAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGAAACCAAAG
* * * * * * ** * *
96509 CATCAATGTCCATGTATCCTAATGAAGG-GAATGTGTTTTTGGTTCCCAATCTTGAAAGGAATGG
1 CATCAATAT-CATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATC-ACAAAAGAATGA
* * * * * * ** * * *
96573 AGAT--TGTTATGAGAATTGATT-CTTGTCATATTTAAGGGATAAATTTTGATTTTAAGGAAAAT
63 AGATCAT-TTCT-AGAA-TGCTTGTTTGACTTATTTAAGGCACGAACTTAGATTTTCA--AAAAT
* * * * ** * * * * * *
96635 AGG-GGAAAGAAAAG-ATTTCCATGCAAAAAAAAAAATCTTCAGTATCATTTTTCCTAATGAGGA
123 TGGTGGGAAGAAAAGCATTT-CTTGC--GAAACCAAAGCATCAATATCGTCTATCCTAATGA-GA
* * * * * * * * *
96698 AAATGTGTTTATTGTGTCT-AT-TCACAAAAGGAATGAAGATTTTTGCTA-GAATCCATGTTTGT
184 AAATATG-TTATGGTGCCTAATCTTAGAAAA-GAATGGAGA--CTAG-TATGAATTCATGTTTGT
* * * * * * * * * * *
96760 CTCATTTGAG-GTAGGAACTTAGACTT-T-TCAAAAATTGGTGGGAAG-AAAGCCTTTCTTGCAA
244 CTTATTTAAGAG-ACGAACTTTGA-TTCTAACAAAAA-CGGTTGAAAGAAAAGCTTTTCTTACGA
96821 AACCAAAG
306 AACCAAAG
* * * * * * **
96829 CATCAATATCATCTATCATAATGAGAAGACTATGTTTATGGTGCCTAATC-CTGAAAAGAATGGG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC--AAAAGAATGAA
* * * * ** * *
96893 GATTA-GTAT-GACTAT-TTATGTTT-ATCTTATTTAAGAG-AAAAACTTTGATTCTAACAAAAA
64 GATCATTTCTAGA--ATGCT-TGTTTGA-CTTATTTAAG-GCACGAACTTAGATT-T-TCAAAAA
* * * * * * ** * * **
96953 -CGGT-TGAAGGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGAATTCTAATCAAGGG
122 TTGGTGGGAA-GAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAAT-GAGAA
* * * * * * *
97016 AATGTGTTTTTGGCT-CCCAATCTT-GAAAAGAATGGAGACTATTACTAGAA-TCAATGCTCGCC
185 AATATG-TTATGG-TGCCTAATCTTAGAAAAGAATGGAGACTAGTA-T-GAATTC-ATGTTTGTC
* * * **
97078 TTATTTAA-AGGATGAACTTTGATTTTAAGGAAAATA-GG--GCAAAGAAAA--TATTTCCAAGC
245 TTATTTAAGA-GACGAACTTTGATTCTAA-CAAAA-ACGGTTG-AAAGAAAAGCT-TTTCTTA-C
* ** *
97137 AAAAGAAAAT
304 GAAACCAAAG
* *
97147 CATCAATATCATTTATCCTATTAAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA-GAATGAAG
* * *
97212 ATCATTTCTAGAATGCTTGTTTGACTTATTTGAGGCACGAACTTGGACTTTTCAAAAAATGGTGG
65 ATCATTTCTAGAATGCTTGTTTGACTTATTTAAGGCACGAACTTAGA-TTTTCAAAAATTGGTGG
* * *
97277 GAAG-AAAGCATTTCTTACGAAACCAAAGCATCAATATCGTCTACCCTAATGAGAAGACTATGTT
129 GAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAA-AATATGTT
* * * * * *
97341 ATGGTGCCTATTC-TAGTAAAGAATGGGGATTAGTATGACTATTCAAGTTTGTCTGATTTAAGAG
193 ATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTATGA--ATTCATGTTTGTCTTATTTAAGAG
* * * * ** *
97405 ACAAACATTGATTCCAACAAAAACGGTTGAAAGAAAAGCTTTTATTGTGACACCAAAG
256 ACGAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGAAACCAAAG
* ** ** * * * * * ** * *
97463 CATCAATGTCATGCATCCTAATGAACAAAATGTGTTTTTGGTTCCCAATCTGGAAAGGAATGGAG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAAGAATGAAG
* * * * * * * * * * *
97528 AT--TGTTATGAGAATCGATT-CTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATAG
65 ATCAT-TTCT-AGAAT-GCTTGTTTGACTTATTTAAGGCACGAACTTAGATTTTCA--AAAATTG
** * ** * * * *
97590 G-GCAAAGAAAAG-ATTTCCATGC-AAAAGAACATCATCAGTATCATTTATCCTAATGAGGAAAA
125 GTGGGAAGAAAAGCATTT-CTTGCGAAACCAA-AGCATCAATATCGTCTATCCTAATGA-GAAAA
* * ** ** * * *
97652 TGTGTT-TAGTGTGTCTAATCACA-AAAAGAATAAAGATCT-TTACTAGAATCCATGTTTGTCTC
187 TATGTTAT-G-GTGCCTAATCTTAGAAAAGAATGGAGA-CTAGTA-T-GAATTCATGTTTGTCTT
* * * * *** * * * * *
97714 ATTTGAG-GCTCGAACTTAGACTT-T-CCAGAAATTAGTAGGAAG-AAAGCCTTTCTTGCAAAAC
247 ATTTAAGAG-ACGAACTTTGA-TTCTAACA-AAAACGGTTGAAAGAAAAGCTTTTCTTACGAAAC
97775 CAAAG
309 CAAAG
* **** * * * ** **
97780 CATCAATGTTGCCTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATCTGGAAAAGAATGGG
1 CATCAATATCATTTATCCTAATGAGGAGA-ATGTGTTTATAGTGCCTAATC-ACAAAAGAATGAA
* * * * * * * * * *
97844 GATTA-GTAT-GACTATTCATGTTTGTCTTATTTAAGAG-ACAAACTTTGATTCTAACAAAAA-C
64 GATCATTTCTAGA--ATGCTTGTTTGACTTATTTAAG-GCACGAACTTAGATT-T-TCAAAAATT
* * * * * * * * * ** **
97905 GGTTGAAACAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCTTGTATCCTAAAAAAGGGAAT
124 GGTGGGAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCT-AATGAGAAAAT
* * * * * * * *
97970 GTAATTTTGGTTCCCAATCTT-GAAAAGAATGGAGACT-G-ATCCGACAATCAATGCTTGCCTTA
188 AT-GTTATGGTGCCTAATCTTAGAAAAGAATGGAGACTAGTAT--GA-ATTC-ATGTTTGTCTTA
* * ** ** * * * *
98032 TTTAA-AGGATGAACTTTGATTTTATGGAAAATA-GG--GCAAAGAAAATATTTTCATGCAAAAG
248 TTTAAGA-GACGAACTTTGATTCTA-ACAAAA-ACGGTTG-AAAGAAAAGCTTTTCTTACGAAAC
* *
98093 AAAAT
309 CAAAG
* *
98098 CATCAATATCATTTATCCTAATGAAGAAAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
1 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA-GAATGAAG
* *
98163 ATCATTTCTAGAATGCTTGTTTGACATATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGG
65 ATCATTTCTAGAATGCTTGTTTGACTTATTTAAGGCACGAACTTAGA-TTTTCAAAAATTGGTGG
*
98228 GAAG-AAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTT
129 GAAGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAA-AATATGTT
*
98292 ATGGTGCCTATTC-TAGAAAAGAATGG
193 ATGGTGCCTAATCTTAGAAAAGAATGG
98318 GAAGAATGTT
Statistics
Matches: 5993, Mismatches: 1832, Indels: 1280
0.66 0.20 0.14
Matches are distributed among these distances:
313 14 0.00
314 41 0.01
315 202 0.03
316 1412 0.24
317 2440 0.41
318 1455 0.24
319 247 0.04
320 113 0.02
321 60 0.01
322 2 0.00
323 5 0.00
324 2 0.00
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (313 bp):
CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAGAATGAAGA
TCATTTCTAGAATGCTTGTTTGACTTATTTAAGGCACGAACTTAGATTTTCAAAAATTGGTGGGA
AGAAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAAATATGTTATG
GTGCCTAATCTTAGAAAAGAATGGAGACTAGTATGAATTCATGTTTGTCTTATTTAAGAGACGAA
CTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTACGAAACCAAAG
Found at i:95536 original size:158 final size:156
Alignment explanation
Indices: 89654--98317 Score: 1875
Period size: 159 Copynumber: 54.7 Consensus size: 156
89644 TTAGACTTTT
* * * * *
89654 CAAAAATTGGTGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTACCCTAATGA
1 CAAAAA-TGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* ** ** * * * * *
89719 GAAGACTATG-TTATGGCACCT-ATTTTAGAAAAGATTGGGGACTAGTATGACAATTCAAGTTTG
64 GAAGAATATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGACTATTCATGTTTG
* **
89782 TCTGATTTAAGAGACCAACTTTGATTCTAA
128 TCTTATTTAAGAGATAAACTTTGATT-TAA
* * * * *
89812 CAAAAATGGTTGAAAGAAAAGCTTTTCTTG-AGATAACAAAGCATCAATGTCTTGTATCCTAA--
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGCA-A-ACCAAAGCATCAATATCATCTATCCTAATG
* * * * * * * * * * * * * * *
89874 ACAAGGGAATGTCTTTTTGGTTCCCATTCTTGAAAAGAATGGAAACTATTTTGA-GAATCGACGT
63 AGAA--GAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGT
** * *
89938 TTGTCAAATTTAAGAGATGAATTTTGATTTTAA
125 TTGTCTTATTTAAGAGATAAACTTTGA-TTTAA
** * * ** * * *
89971 GGAAAATAGG--GCAAAGAAAAG-ATTTCCATGCAAAAGAAAATCATCAGTATCATTTATCCTAA
1 CAAAAAT-GGTTG-AAAG-AAAGCCTTT-CTTGC-AAACCAAAGCATCAATATCATCTATCCTAA
* ** * * * * *
90033 TGAGGAA-AATGTGTTTATTATGTCTAAT--TACAAAAGGAATGAAGATCT-TTACTGGA--ATC
61 TGA-GAAGAATATGTTTATGGTGCCTAATCCT-GAAAA-GAATGGAGAT-TAGTA-T-GACTATT
* * * *
90092 CATGTTTGTCTCATTT--GAGTTAGGAACTTAGACTTT-T
120 CATGTTTGTCTTATTTAAGAGATA--AACTTTGA-TTTAA
* ** * *
90129 CAAAAATTGGTGGCGAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCGTCTATCATAATGA
1 CAAAAA-TGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * *
90194 GATGACTATGTTTATGGTGCCAAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTAT
64 GAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGT
*
90259 CTTATTTAAGAGAAAAACTTTGATTCTAA
129 CTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * * *
90288 CAAAAACGGTTGAAGGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAATCA
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * * * * *
90353 -AGGGAATGTGTTT-TTG-GCTCTCAATCTTGAAAAGAATGGAGACTATTACGA-GAATCAATGC
64 GA-AGAATATGTTTATGGTGC-CT-AATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGT
*
90414 TTGCCTTATTTAA-AGGATAAACTTTGATTTTAA
125 TTGTCTTATTTAAGA-GATAAACTTTGA-TTTAA
** *** * ** * *
90447 GGAAAATAGG--GCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAAT
1 CAAAAAT-GGTTG-AAAGAAAGCCTTT-CTTGC-AAACCAAAGCATCAATATCATCTATCCTAAT
* * * * * * * * *
90510 GAGGAGAATGTGTTTATAGTGCCTAATCAC--AAAATGAATGAAGATCATTTCTAGA--ATGCTT
62 GAGAAGAATATGTTTATGGTGCCTAATC-CTGAAAA-GAATGGAGATTA-GTAT-GACTATTCAT
* * ** * *
90571 GTTTGACTTATTTGAG-GCACGAACTTAGACTTT-T
123 GTTTGTCTTATTTAAGAG-ATAAACTTTGA-TTTAA
* * * * *
90605 CAAAAATTGGTGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTACCCTAATGA
1 CAAAAA-TGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * ** * * * * *
90670 GAAGACTATG-TTATGGCGCCT-ATTTTAGAAAAGATTGGGGACTAGTATGACAATTCAAGTTTG
64 GAAGAATATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGACTATTCATGTTTG
* **
90733 TCTGATTTAAGAGACCAACTTTGATTCTAA
128 TCTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * *
90763 CAAAAACGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAA--A
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * * * * * * * *
90826 GAAGGGAATGTCTTTTTGGTTCCCACTCTTGAAAAGAATGGAAACT-GTTTTGA-GAATCGACGT
64 GAA--GAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAG-TATGACTATTC-ATGT
** * * *
90889 TTGTCAAATTTAAGGGATGAATTTTGATTTTAA
125 TTGTCTTATTTAAGAGATAAACTTTGA-TTTAA
** * * ** * * *
90922 GGAAAATAGG--GCAAAGAAAAG-ATTTCCATGCAAAAGAAAATCATCAGTATCATTTATCCTAA
1 CAAAAAT-GGTTG-AAAG-AAAGCCTTT-CTTGC-AAACCAAAGCATCAATATCATCTATCCTAA
* ** * * * * *
90984 TGAGGAA-AATGTGTTTATTATGTCTAAT--TACAAAAGGAATGAAGATCT-TTACTGGA--ATC
61 TGA-GAAGAATATGTTTATGGTGCCTAATCCT-GAAAA-GAATGGAGAT-TAGTA-T-GACTATT
* * *
91043 CATGTTTGTCTCATTT--GAGATAGGAACTTAGACTTT-T
120 CATGTTTGTCTTATTTAAGAGATA--AACTTTGA-TTTAA
* * ** *
91080 CAAAATTTGGTGGGGAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGA
1 CAAAA-ATGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * *
91145 GAAGACTATGTTTATGGTGCCAAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTAT
64 GAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGT
*
91210 CTTATTTAAGAGAAAAACTTTGATTCTAA
129 CTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * * *
91239 CAAAAACGGTTGAAGGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAATCA
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * * *
91304 -AGGGAATGTGTTT-TTG-GCTCTCAATCTTGAAAAGAATGGAGACTA-TCACGA-GAATCAATG
64 GA-AGAATATGTTTATGGTGC-CT-AATCCTGAAAAGAATGGAGATTAGT-ATGACTATTC-ATG
* * *
91364 CTTGCCTTATTTAATG-GATGAACTTTGATTTTAA
124 TTTGTCTTATTTAA-GAGATAAACTTTGA-TTTAA
** * *** ** ** * *
91398 GGAAAATAGGGT-AAAGAAAATATTTCCACGCAAATGAAAATCATCAATATCATTTATCCTAATG
1 CAAAAAT-GGTTGAAAGAAAGCCTTT-CTTGCAAA-CCAAAGCATCAATATCATCTATCCTAATG
* * * * * * * * *
91462 AGGAGAATGTGTTTATAGTGCCTAATCAC--AAAATGAATGAAGATCATTTCTAGA--ATGCTTG
63 AGAAGAATATGTTTATGGTGCCTAATC-CTGAAAA-GAATGGAGATTA-GTAT-GACTATTCATG
* * ** * *
91523 TTTGACTTATTTGAG-GCACGAACTTAGACTTT-T
124 TTTGTCTTATTTAAGAG-ATAAACTTTGA-TTTAA
* * * *
91556 CAAAAATTGGTGGGAAGAAAGCCTTTCTTGCATAACCAAAGCATCAATATCGTCTATCCTAGTGA
1 CAAAAA-TGGTTGAAAGAAAGCCTTTCTTGCA-AACCAAAGCATCAATATCATCTATCCTAATGA
* * *
91621 GAA-AACTATGTATATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTA
64 GAAGAA-TATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTG
* * *
91685 TCTTATTTAAAAGACAAACTTTGATTCTCA
128 TCTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * *
91715 CAAAAACGGTTGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCTTGTATCCTAA--A
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * ** * * *
91778 GAAGGGA-ATGTACTTTTGGTTCCCAATATTGAAAAGAATGGAGACT-GTTACGAC-AATCAATG
64 GAA-GAATATGT--TTATGGTGCCTAATCCTGAAAAGAATGGAGATTAG-TATGACTATTC-ATG
* * *
91840 CTTGCCTTATTTAA-AGGATGAACTTTGATTTTAA
124 TTTGTCTTATTTAAGA-GATAAACTTTGA-TTTAA
* * * *** * ** * * * *
91874 GGAAAATAAGG--CAAAGAAAATATTTCCATGCAAATGAAAATCATCAATTTCATTTATCCTGAT
1 -CAAAA-ATGGTTGAAAGAAAGCCTTT-CTTGCAAA-CCAAAGCATCAATATCATCTATCCTAAT
* * * * * * * * * ** * *
91937 GAGGAGAATGTGTTT-GGAGAGCCTAATCAC--AAAATAAATGAATATCA-TTTGTAGAATGCTT
62 GAGAAGAATATGTTTATG-GTGCCTAATC-CTGAAAA-GAATGGAGATTAGTATG-ACTATTCAT
** * ** * *
91998 GTTTGAATTATTTGAG-GCACGAACTTAGACTTT-T
123 GTTTGTCTTATTTAAGAG-ATAAACTTTGA-TTTAA
* * *
92032 CAAAAATTGGCGTG-AAGAAAGCCTTTCTTGTGAAACCAAAGCATCAATAGCATCTATCCTAATG
1 CAAAAA-TGG-TTGAAAGAAAGCCTTTCTTG-CAAACCAAAGCATCAATATCATCTATCCTAATG
* * * * *
92096 AGAAGACTATGTTATAT--CGCCT-ATTCTAGAAAAGAATTGG-GACTAGTATGACTATTCAAGT
63 AGAAGAATATGTT-TATGGTGCCTAATCCT-GAAAAGAA-TGGAGATTAGTATGACTATTCATGT
* *
92157 TTGTCTGATTTAAGAGACAAACTTTGATTCTAA
125 TTGTCTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * *
92190 CAAAAACGATTGAAAGAAAAGCTTTTCTTGCGATACCAAAGCATCAATGTCTTGTATCCTAA--A
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * * * * * * *
92253 GAAGGGAATGTCTTTTTGGTTCCCACTCTTGAAAAGAATGGAAACTATTATGA-GAATCGATGTT
64 GAA--GAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGTT
** * * *
92317 TGTCAAATTTAAGGGATGAATTTTGATTTTAA
126 TGTCTTATTTAAGAGATAAACTTTGA-TTTAA
** ** * * ** * * *
92349 GGAAAATAGG-ACAAAGAAAAG-ATTTCCATGCCAAAAAAAATCATCAGTATCATTTATCCTAAT
1 CAAAAAT-GGTTGAAAG-AAAGCCTTT-CTTG-CAAACCAAAGCATCAATATCATCTATCCTAAT
* * * * *
92412 GAGGAA-AATGTGTTTATTGTGTCTAATCAC--AAAAGGAATGAAGATCT--T-T-ACTATAACC
62 GA-GAAGAATATGTTTATGGTGCCTAATC-CTGAAAA-GAATGGAGAT-TAGTATGACTAT---T
* * * *
92470 CATGTTTGTCTCATTTGAG-GCA-AGAACTTAGACTTT-T
120 CATGTTTGTCTTATTTAAGAG-ATA-AACTTTGA-TTTAA
* * ** * *
92507 CAGAAATTGGTGGGGAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCGTCTATCATAATGA
1 CA-AAAATGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * *
92572 GAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTAT
64 GAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGT
*
92637 CTTATTTAAGAGACAAACTTTGATTCTAA
129 CTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * *
92666 CAAAAACGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAA--A
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * * * * * *
92729 GAAGGGA-ATGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGA-GAATCAATGC
64 GAA-GAATATGT--TTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGT
* *
92792 TTGCCTTATTTAA-AGGATGAACTTTGATTTTAA
125 TTGTCTTATTTAAGA-GATAAACTTTGA-TTTAA
** *** ** * ** * * * *
92825 GGAAAATAGG--GCAAAGAAAATATTTCCAAGAAAAAGAAAATCATCAATTTCATTTATCCTGAT
1 CAAAAAT-GGTTG-AAAGAAAGCCTTT-CTTG-CAAACCAAAGCATCAATATCATCTATCCTAAT
* * * * * * * * ** * *
92888 GAGGAGAATGTGTTT-GGAGTGCCTAATCAC--AAAATAAATGAATATT-GTTTCTAGAATGCTT
62 GAGAAGAATATGTTTATG-GTGCCTAATC-CTGAAAA-GAATGGAGATTAGTAT-GACTATTCAT
* * * * *
92949 GTTTGACTTATTTGAG-GAACAAACTTAGACTTT-T
123 GTTTGTCTTATTTAAGAG-ATAAACTTTGA-TTTAA
* * *
92983 CAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCATAATGA
1 CAAAAA-TGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * *
93048 GAAGACTATG-TTATGGTGCCT-ATTCTAGAAAAGAATGGGGATTAGTATGACCATTCAAGTTTG
64 GAAGAATATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGACTATTCATGTTTG
* *
93111 TCTGATTTAAGAGACAAACTTTGATTCTAA
128 TCTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * *
93141 TAAAAATGTTTGAAAGAAAAGCTTTTATTGCGACACCAAAGCATCAATGTCCATGTATCCTAATG
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATAT-CATCTATCCTAATG
* * * * * * * * * * * * *
93206 A-AGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAAAGAAGACTA-TTTAGA-GAATCAATGC
63 AGA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTAT-GACTATTC-ATGT
* * *
93268 TTGCCTTATTTAAGTGATGAACTTTGATTTTAA
125 TTGTCTTATTTAAGAGATAAACTTTGA-TTTAA
** *** * ** * * *
93301 GGAAAATAGG--GCAAAGGAAATATTTTCATGCAAAAGAAAATCATCAATATCATTTACCCTAAT
1 CAAAAAT-GGTTG-AAA-GAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAAT
* * * ** * * * * * *
93364 GAGGAGAATGTGTTTATCGTGCCTAA-CCACAAATGAATGAAGATCA-T-T-TCTAAAATCTATA
62 GAGAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACT--ATTC-ATG
* * * ** *
93425 TTTATCTCATTTGAG-GCACGAACTTAGATATTATA
124 TTTGTCTTATTTAAGAG-ATAAACTTTGAT-TTA-A
* * * * * *
93460 -AAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATTAATATCATGTATCCTTATGAG
1 CAAAAATGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGAG
* * * * *
93524 AGGACTAAGCTTATGGTGCCTAGTCCTGAAAAGATTAT-G-GATTAGTATGACTATTCATGTTTG
65 AAGAATATGTTTATGGTGCCTAATCCTGAAAAGA--ATGGAGATTAGTATGACTATTCATGTTTG
** ** *
93587 TCTTATTTTGGAGGCAAACTTTGATTCTAT
128 TCTTATTTAAGAGATAAACTTTGATT-TAA
* * * ** *
93617 CAAAAATGGTTGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGCCATGTATCCTAATGA
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * * *
93682 -AGGAAT-TGTATTCTTGGTTCCT-ATTCTCGAAAAGAATGGAGACT-GTTACGA-GAATCGGA-
64 GAAGAATATGT-TT-ATGGTGCCTAATCCT-GAAAAGAATGGAGATTAG-TATGACTATTC--AT
* ** * *
93741 GCTTGTCAAATTTAA-AGGATGAATTTTGATTTTAA
123 GTTTGTCTTATTTAAGA-GATAAACTTTGA-TTTAA
** ** * * ** * * *
93776 GGAAAATAGG-ACAAAGAAAAG-ATTTCCATGCCAAAAAAAATCATCAGTATCATTTATCCTAAT
1 CAAAAAT-GGTTGAAAG-AAAGCCTTT-CTTG-CAAACCAAAGCATCAATATCATCTATCCTAAT
* * * * **
93839 GAGGAA-AATATGTTTATTGTGTCTAATCAC--AAAAGGAATGAAGATCT-TTACTAGA--ACCC
62 GA-GAAGAATATGTTTATGGTGCCTAATC-CTGAAAA-GAATGGAGAT-TAGTA-T-GACTATTC
* * ** * *
93898 ATGTTTGTCTCATTTGAG-GCAGGAACTTAGACTTT-T
121 ATGTTTGTCTTATTTAAGAG-ATAAACTTTGA-TTTAA
* * ** * * * *
93934 CAGAAATTGGTGGGGAGAAAACCTTTCTTGCAAAACCAAAGCGTCAATATCGTCTATCATAATGA
1 CA-AAAATGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * *
93999 GAAGACTATGTTTATGGTGCCTAATCCTGAAAACAATGGGGATTAGTATGACTATTCATGTTTAT
64 GAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGT
**
94064 CTTATTTAAGAGACCAACTTTGATTCTAA
129 CTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * *
94093 CAAAAACGGTTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGTATCCTAA--A
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * * * * * *
94156 GAAGGGA-ATGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGA-GAATCAATGC
64 GAA-GAATATGT--TTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGT
* *
94219 TTGCCTTATTTAA-AGGATGAACTTTGATTTTAA
125 TTGTCTTATTTAAGA-GATAAACTTTGA-TTTAA
** *** ** * ** * * * * *
94252 GGAAAATAGG--GCAAAGAAAATATTTTCAAGAAAAAGAAAATCATCAATTTCATTTACCCTGAT
1 CAAAAAT-GGTTG-AAAG-AAAGCCTTTCTTG-CAAACCAAAGCATCAATATCATCTATCCTAAT
* * * * * * * ** * *
94315 GAGGAGAATGTGTTT-GGAGTGCCTAATCAC--AAAATAAAT-GA-ATAATGTTTCTAGAATGCT
62 GAGAAGAATATGTTTATG-GTGCCTAATC-CTGAAAA-GAATGGAGATTA-GTAT-GACTATTCA
* * * **
94375 TGTTTGACTTATTTGAG-GA-ACGAACTTAGACTTTTT
122 TGTTTGTCTTATTTAAGAGATA--AACTTTGA-TTTAA
* * * * * *
94411 CAAGATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTCTATCATAATGAG
1 CAAAAATGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGAG
* * *
94476 AA-AACTATG-TTATGGTGCCT-ATTCTAGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTG
65 AAGAA-TATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGACTATTCATGTTTG
*
94538 TCTTATTTAAGAGAGAAACTTTGATTATAA
128 TCTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * * * *
94568 TAAAATTGGTTGAAAGAAAAGCTTTTATTGCGACACTAAAGCATCAATGTCTTGTATCCTAA--A
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * * * * * *
94631 GAATGGAATGTATTTTTGGTTCCCAATCTTGAAAAGAATGGAGACTATTACGAC-AATCAATGCT
64 GAA--GAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGTT
* * *
94695 TGCCTTATTTAA-AGGATGAACATTGATTTTAA
126 TGTCTTATTTAAGA-GATAAACTTTGA-TTTAA
** *** * ** * * *
94727 GGAAAATAGG--GCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTGAT
1 CAAAAAT-GGTTG-AAAGAAAGCCTTT-CTTGC-AAACCAAAGCATCAATATCATCTATCCTAAT
* * * * * * * * * ** * *
94790 GAGGAGAATGTGTTT-GGAGTGCCTAATCAT-AAAATAAATGAATATT-GTTTCTAGAATGCTTG
62 GAGAAGAATATGTTTATG-GTGCCTAATCCTGAAAA-GAATGGAGATTAGTAT-GACTATTCATG
* ** ** * * *
94852 TTTGACTTATTTGTG-GCACGAACATAGACTTT-T
124 TTTGTCTTATTTAAGAG-ATAAACTTTGA-TTTAA
* * * * * *
94885 CAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAACATCAATAGCATCTATCCTGATGA
1 CAAAAA-TGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * *
94950 GAAGACTATG-TTAT-GTCGCCT-ATTCTAGAAAAGAATGGGGACTAGTATGATTATTCAAGTTT
64 GAAGAATATGTTTATGGT-GCCTAATCCT-GAAAAGAATGGAGATTAGTATGACTATTCATGTTT
* * * *
95012 GTCTGAGTTAAGGGACAAACTTTGATTCTAA
127 GTCTTATTTAAGAGATAAACTTTGATT-TAA
* ** * * * * *
95043 CAGAAACAGTTGAAAGAAAAGCTTTTCTTGCAATACCAAAGCATCTATGTCTTGTATCCTAA--A
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGCAA-ACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * * * * * * *
95106 GAAGGA-ATGCCTTTTTGGTTCCCACTCTTGAAAGGAATGGAAACTATTATGA-GAATCGATGTT
64 GAAGAATATG--TTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGTT
* * * *
95169 TGTC-AAGTTTAAGGGATGAATTTTGATTTTAA
126 TGTCTTA-TTTAAGAGATAAACTTTGA-TTTAA
** * * * * * * *
95201 GGAAAATAGGGT-AAAGAAAAG-ATTTCCATGCAAAACAAAATCATCAGTATCATTTATCCTAAT
1 CAAAAAT-GGTTGAAAG-AAAGCCTTT-CTTGC-AAACCAAAGCATCAATATCATCTATCCTAAT
* * * * * *
95264 GACGAA-AATGTGTTTATTGTGTCTAATCAC--AAAAGGAATGAAGATCT-TTACTAGA--ATCC
62 GA-GAAGAATATGTTTATGGTGCCTAATC-CTGAAAA-GAATGGAGAT-TAGTA-T-GACTATTC
* * * *
95323 ATGTTTGTCTCATTTGAG-GCATAAACTTAGACTTTTTA
121 ATGTTTGTCTTATTTAAGAG-ATAAACTTTGA--TTTAA
* * * ** **
95361 -GAAATTGGTGGGGAGAAAGCCTTTCTTGCATAACCAAAGCATCAATATCATCTATCAAAATGAG
1 CAAAAATGGTTGAAAGAAAGCCTTTCTTGCA-AACCAAAGCATCAATATCATCTATCCTAATGAG
* * *
95425 AAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTATC
65 AAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTC
95490 TTATTTAAGAGATAAACTTTGATTCTAA
130 TTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * *
95518 CAAAAACGGTTGAAAGAAAAGCTTTTCTTGCAACACCAACGCATCAACATCTTGTTTCCTAA--A
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGCAA-ACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * *
95581 GAAGGGA-ATGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTA-T-T-ACTTGAATCAAT
64 GAA-GAATATGT--TTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGAC-T-ATTC-AT
* * *
95642 GCTTGCCTTATTTAA-AGGATGAACTTTGATTTTAA
123 GTTTGTCTTATTTAAGA-GATAAACTTTGA-TTTAA
** *** ** ** * * * *
95677 GGAAAATAGG--GCAAAGAAAATATTTCCAAGCAAAAGAAAATCATCAATTTCATTTATCCTGAT
1 CAAAAAT-GGTTG-AAAGAAAGCCTTT-CTTGC-AAACCAAAGCATCAATATCATCTATCCTAAT
* * * * * * * * * * * *
95740 GAGGAGAATGTGTTT-GGAGTGCCTAATCC-CAAAATAAATGAATATCATTTCTAGA--ATGCTT
62 GAGAAGAATATGTTTATG-GTGCCTAATCCTGAAAA-GAATGGAGATTA-GTAT-GACTATTCAT
* * ** * **
95801 GTTTGACTTATTTGAG-GCACGAACTTAGACTTTTC
123 GTTTGTCTTATTTAAGAG-ATAAACTTTGA-TTTAA
* * * * * * *
95836 CAAGATTGGTCGGAAGAAAGCCTTTCTTGTGAAACCAAAGCATCAATATCGTCTATCATAATGAG
1 CAAAAATGGTTGAAAGAAAGCCTTTCTTG-CAAACCAAAGCATCAATATCATCTATCCTAATGAG
* * * *
95901 AA-AACTATG-TTATGGTGCCT-ATTCTAGAAAAGAATGGGGATTAGTATGACTATTTAAGTTTG
65 AAGAA-TATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGACTATTCATGTTTG
* *
95963 TCTTATTTAAAAGACAAACTTTGATTATAA
128 TCTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * *
95993 CAAAAATAGTTGAAAGAAAAGCTTTTATTGCGACACCAAAGCATCAATGTCTTGTATCCTAA--A
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * * *
96056 GAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAAGAATGGAGACT-GTTATGAC-AATCAATGC
64 GAA--GAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAG-TATGACTATTC-ATGT
* * *
96119 TTGCCTTATTTAA-AGGATGAACATTGATTTTAA
125 TTGTCTTATTTAAGA-GATAAACTTTGA-TTTAA
** *** * ** * * *
96152 GGAAAATAGG--GCAAAGAAAATATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTGAT
1 CAAAAAT-GGTTG-AAAGAAAGCCTTT-CTTGC-AAACCAAAGCATCAATATCATCTATCCTAAT
* * * * * * * * ** * *
96215 GAGGAGAATGTGTTT-GGAGTGCCTAATCAC--AAAATAAATGAATATT-GTTTCTAGAATGCTT
62 GAGAAGAATATGTTTATG-GTGCCTAATC-CTGAAAA-GAATGGAGATTAGTAT-GACTATTCAT
* * ** * * *
96276 GTTTGACTTATTTGAG-GCACGAACATAGACTTT-T
123 GTTTGTCTTATTTAAGAG-ATAAACTTTGA-TTTAA
* * *
96310 CAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATCTATCATAATGA
1 CAAAAA-TGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * *
96375 GAAGACTATG-TTATGGTGCCT-ATTCTAGAAAAGAATGGGGATTAGTATGA-TCATTCAAGTTT
64 GAAGAATATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGACT-ATTCATGTTT
* *
96437 GTCTGATTTAAGAGACAAACTTTGATTCTAA
127 GTCTTATTTAAGAGATAAACTTTGATT-TAA
* * ** * * * *
96468 TAAAAATGTTTGAAAGAAAAGTTTTTATTGCGACACCAAAGCATCAATGTCCATGTATCCTAATG
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATAT-CATCTATCCTAATG
* * * * * * * ** *
96533 A-AGGGAATGTGTTTTTGGTTCCCAATCTTGAAAGGAATGGAGATT-GTTATGAGAATTGAT-TC
63 AGA-AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAG-TATGACTATTCATGT-
* * *
96595 TTGTCATATTTAAGGGATAAATTTTGATTTTAA
125 TTGTCTTATTTAAGAGATAAACTTTGA-TTTAA
** * * * ** * * * * *
96628 GGAAAATAGG-GGAAAGAAAAG-ATTTCCATGCAAAAAAAAAAATCTTCAGTATCATTTTTCCTA
1 CAAAAAT-GGTTGAAAG-AAAGCCTTT-CTTGC---AAACCAAAGCATCAATATCATCTATCCTA
* * * * * *
96691 ATGAGGAA-AATGTGTTTATTGTGTCTATTCAC--AAAAGGAATGAAGATT--TTTG-CTAGAAT
60 ATGA-GAAGAATATGTTTATGGTGCCTAATC-CTGAAAA-GAATGGAGATTAGTATGACT---AT
* * * * *
96750 CCATGTTTGTCTCATTT--GAGGTAGGAACTTAGACTTT-T
119 TCATGTTTGTCTTATTTAAGAGATA--AACTTTGA-TTTAA
* * *
96788 CAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATATCATCTATCATAATGA
1 CAAAAA-TGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * *
96853 GAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTTATGTTTAT
64 GAAGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGT
*
96918 CTTATTTAAGAGAAAAACTTTGATTCTAA
129 CTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * ** * *
96947 CAAAAACGGTTGAAGGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCTTGAATTCTAATCA
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * *
97012 -AGGGAATGTGTTTTTGGCT-CCCAATCTTGAAAAGAATGGAGACTA-T-T-ACTAGAATCAATG
64 GA-AGAATATGTTTATGG-TGCCTAATCCTGAAAAGAATGGAGATTAGTATGACT--ATTC-ATG
* * * *
97072 CTCGCCTTATTTAA-AGGATGAACTTTGATTTTAA
124 TTTGTCTTATTTAAGA-GATAAACTTTGA-TTTAA
** *** ** ** * * *
97106 GGAAAATAGG--GCAAAGAAAATATTTCCAAGCAAAAGAAAATCATCAATATCATTTATCCTATT
1 CAAAAAT-GGTTG-AAAGAAAGCCTTT-CTTGC-AAACCAAAGCATCAATATCATCTATCCTAAT
* * * * * * * * * *
97169 AAGGAGAATGTGTTTATAGTGCCTAATCAC--AAAATGAATGAAGATCATTTCTAGA--ATGCTT
62 GAGAAGAATATGTTTATGGTGCCTAATC-CTGAAAA-GAATGGAGATTA-GTAT-GACTATTCAT
* * ** * *
97230 GTTTGACTTATTTGAG-GCACGAACTTGGACTTT-T
123 GTTTGTCTTATTTAAGAG-ATAAACTTTGA-TTTAA
* * * * * *
97264 CAAAAAATGGTGGGAAGAAAGCATTTCTTACGAAACCAAAGCATCAATATCGTCTACCCTAATGA
1 C-AAAAATGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * *
97329 GAAGACTATG-TTATGGTGCCT-ATTCTAGTAAAGAATGGGGATTAGTATGACTATTCAAGTTTG
64 GAAGAATATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGACTATTCATGTTTG
* * * *
97392 TCTGATTTAAGAGACAAACATTGATTCCAA
128 TCTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * *
97422 CAAAAACGGTTGAAAGAAAAGCTTTTATTGTGACACCAAAGCATCAATGTCATGC-ATCCTAATG
1 CAAAAATGGTTGAAAG-AAAGCCTTTCTTG-CAAACCAAAGCATCAATATCAT-CTATCCTAATG
* * * * * * * *
97486 A-ACAAAATGTGTTTTTGGTTCCCAAT-CTGGAAAGGAATGGAGATT-GTTATGA-GAATCGAT-
63 AGA-AGAATATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAG-TATGACTATTC-ATG
* * * *
97546 TCTTGTCATATTTAAGGGATGAATTTTGATTTTAA
124 T-TTGTCTTATTTAAGAGATAAACTTTGA-TTTAA
** * * ** * * *
97581 GGAAAATAGG--GCAAAGAAAAG-ATTTCCATGCAAAAGAACATCATCAGTATCATTTATCCTAA
1 CAAAAAT-GGTTG-AAAG-AAAGCCTTT-CTTGCAAACCAA-AGCATCAATATCATCTATCCTAA
* * * ** * *
97643 TGAGGAA-AATGTGTTTA-GTGTGTCTAATCAC-AAAAAGAATAAAGATCT-TTACTAGA--ATC
61 TGA-GAAGAATATGTTTATG-GTGCCTAATC-CTGAAAAGAATGGAGAT-TAGTA-T-GACTATT
* * * * * *
97702 CATGTTTGTCTCATTTGAG-GCTCGAACTTAGACTTT-C
120 CATGTTTGTCTTATTTAAGAGAT-AAACTTTGA-TTTAA
* * * * * ***
97739 CAGAAATTAGTAGGAAGAAAGCCTTTCTTGCAAAACCAAAGCATCAATGTTGCCTATCCTAATGA
1 CA-AAAATGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
*
97804 GAAGACA-ATGTTTATGGTGCCTAAT-CTGGAAAAGAATGGGGATTAGTATGACTATTCATGTTT
64 GAAGA-ATATGTTTATGGTGCCTAATCCT-GAAAAGAATGGAGATTAGTATGACTATTCATGTTT
*
97867 GTCTTATTTAAGAGACAAACTTTGATTCTAA
127 GTCTTATTTAAGAGATAAACTTTGATT-TAA
* * * * * * * *
97898 CAAAAACGGTTGAAACAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCTTGTATCCTAA--A
1 CAAAAATGGTTGAAA-GAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* * * * * * * *
97961 AAAGGGA-ATGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACT-G-ATCCGAC-AATCAAT
64 GAA-GAATATGT--TTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTAT--GACTATTC-AT
* * * *
98022 GCTTGCCTTATTTAA-AGGATGAACTTTGATTTTAT
123 GTTTGTCTTATTTAAGA-GATAAACTTTGA-TTTAA
** *** * ** * *
98057 GGAAAATAGG--GCAAAGAAAATATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAAT
1 CAAAAAT-GGTTG-AAAG-AAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAAT
* * * * * * * *
98120 GAAGAA-AATGTGTTTATAGTGCCTAATCAC--AAAATGAATGAAGATCATTTCTAGA--ATGCT
62 G-AGAAGAATATGTTTATGGTGCCTAATC-CTGAAAA-GAATGGAGATTA-GTAT-GACTATTCA
* * * ** * *
98180 TGTTTGACATATTTGAG-GCACGAACTTAGACTTT-T
122 TGTTTGTCTTATTTAAGAG-ATAAACTTTGA-TTTAA
* * * *
98215 CAAAAATTGGTGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGA
1 CAAAAA-TGGTTGAAAGAAAGCCTTTCTTGC-AAACCAAAGCATCAATATCATCTATCCTAATGA
* *
98280 GAAGACTATG-TTATGGTGCCT-ATTCTAGAAAAGAATGG
64 GAAGAATATGTTTATGGTGCCTAATCCT-GAAAAGAATGG
98318 GAAGAATGTT
Statistics
Matches: 6011, Mismatches: 1863, Indels: 1265
0.66 0.20 0.14
Matches are distributed among these distances:
155 15 0.00
156 93 0.02
157 615 0.10
158 1996 0.33
159 2727 0.45
160 369 0.06
161 167 0.03
162 26 0.00
163 1 0.00
164 2 0.00
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (156 bp):
CAAAAATGGTTGAAAGAAAGCCTTTCTTGCAAACCAAAGCATCAATATCATCTATCCTAATGAGA
AGAATATGTTTATGGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCT
TATTTAAGAGATAAACTTTGATTTAA
Found at i:98624 original size:352 final size:353
Alignment explanation
Indices: 97974--98654 Score: 1033
Period size: 352 Copynumber: 1.9 Consensus size: 353
97964 GGGAATGTAA
* * * *
97974 TTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGATCCGACAATCAATGCTTGCCTTATTTAAAG
1 TTTTGGTACCCAATCTTGAAAAGAATGGAGACTGATACGACAATCAATGCTTACCTTACTTAAAG
* * * * *
98039 GATGAACTTTGATTTTATGGAAAATAGGGCAAAGAAAATATTTTCATGCAAAAGAAAATCATCAA
66 GATGAACTTTAATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
98104 TATCATTTATCCTAATGAAGAAAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATT
131 TATCATTTATCCTAATGAAGAAAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATT
* * * * ** **
98169 TCTAGAATGCTTGTTTGACATATTTGAGGCACGAACTTAGACTTTTCAAAAATTGGTGGGAAGAA
196 ACTAGAATCCATGTTGGACATATTTGAGGCACGAACTTAGACTTAACAAAAATTGGAAGGAAGAA
* * *
98234 AGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATG-TTATGGTG
261 AGCATTTCCTACAAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGTG
98298 CCTATTCTAGAAAAGAATGGGAAGAATG
326 CCTATTCTAGAAAAGAATGGGAAGAATG
* * * *
98326 TTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAGTCAATGCTTACCTTACTTAAGG
1 TTTTGGTACCCAATCTTGAAAAGAATGGAGACTGATACGACAATCAATGCTTACCTTACTTAAAG
* *
98391 GATGAACTTTAATTTTAAGGAATATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATTAA
66 GATGAACTTTAATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
* * * **
98456 TATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCATGAAATGAATGAAGATCATT
131 TATCATTTATCCTAATGAAGAAAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATT
98521 ACTAGAATCCATGTTGGAC-TCATTTGAGGCACGAACTTAGACTTAACAAAAATTGGAAGGAAGA
196 ACTAGAATCCATGTTGGACAT-ATTTGAGGCACGAACTTAGACTTAACAAAAATTGGAAGGAAGA
* * *
98585 AAGCCTTTCCTACAAAATCAAAGCATCAATATTGTCTATCCTAATGAGAAGACTATGTTTATGGT
260 AAGCATTTCCTACAAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGT
98650 GCCTA
325 GCCTA
98655 ATCCTGGAAA
Statistics
Matches: 293, Mismatches: 34, Indels: 3
0.89 0.10 0.01
Matches are distributed among these distances:
351 1 0.00
352 280 0.96
353 12 0.04
ACGTcount: A:0.37, C:0.14, G:0.19, T:0.30
Consensus pattern (353 bp):
TTTTGGTACCCAATCTTGAAAAGAATGGAGACTGATACGACAATCAATGCTTACCTTACTTAAAG
GATGAACTTTAATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
TATCATTTATCCTAATGAAGAAAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATT
ACTAGAATCCATGTTGGACATATTTGAGGCACGAACTTAGACTTAACAAAAATTGGAAGGAAGAA
AGCATTTCCTACAAAACCAAAGCATCAATATCGTCTATCCTAATGAGAAGACTATGTTTATGGTG
CCTATTCTAGAAAAGAATGGGAAGAATG
Found at i:99110 original size:828 final size:828
Alignment explanation
Indices: 97498--99116 Score: 2341
Period size: 828 Copynumber: 2.0 Consensus size: 828
97488 CAAAATGTGT
* * * * * * ** *
97498 TTTTGGTTCCCAATCTGGAAAGGAATGGAGATTGTTATGAGAATCGATTCTTGTCATATTTAAGG
1 TTTTGGTACCCAATCTGGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTACCATACTTAAGG
* * * * *
97563 GATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAACATCATCAG
66 GATGAACTTTAATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
* *
97628 TATCATTTATCCTAATGAGGAAAATGTGTTTAGTGTGTCTAATCACAAAAAGAATAAAGATCTTT
131 TATCATTTATCCTAATGAGGAAAATGTGTTTAGTGTGCCTAATCACAAAAAGAATAAAGATCATT
* * * ** * *
97693 ACTAGAATCCATGTTTGTCTCATTTGAGGCTCGAACTTAGACTTTCCAGAAATTAGTAGGAAGAA
196 ACTAGAATCCATGTTGGACTCATTTGAGGCACGAACTTAGACTTAACAAAAATTAGAAGGAAGAA
* * *
97758 AGCCTTTCTTGCAAAACCAAAGCATCAATGTTGCCTATCCTAATGAGAAGACAATGTTTATGGTG
261 AGCCTTTCCTACAAAACCAAAGCATCAATATTGCCTATCCTAATGAGAAGACAATGTTTATGGTG
* *
97823 CCTAATCTGGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACT
326 CCTAATCTGGAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCATATTTAAGAGACAAACT
* * *
97888 TTGATTCTAACAAAAACGGTTGAAACAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCTTGT
391 TTGATTCTAACAAAAACGGTTGAAAAAAAAGCTTTTCTTACGACACCAAAACATCAATGTCATGT
* ** * * *
97953 ATCCTAAAAAAGGGAATGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGATCCGACAAT
456 ATCATAAAAAAGAAAACGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGATACAACAAT
* * *
98018 CAATGCTTGCCTTATTTAAAGGATGAACTTTGATTTTATGGAAAATAGGGCAAAGAAAATATTTT
521 CAATGCTTGCCATATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTT
98083 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAAGAAAATGTGTTTATAGTGCCTAATC
586 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAAGAAAATGTGTTTATAGTGCCTAATC
* *
98148 ACAAAATGAATGAAGATCATTTCTAGAATGCTTGTTTGACATATTTGAGGCACGAACTTAGACTT
651 ACAAAATGAATGAAGATCATTACTAGAATGCATGTTTGACATATTTGAGGCACGAACTTAGACTT
* * * *
98213 TTCAAAAATTGGTGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAATATCGTCTATCCTAAT
716 TCCAAAAATTGGGGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAACATCATCTATCCTAAT
98278 GAGAAGACTATGTTATGGTGCCTATTCTAGAAAAGAATGGGAAGAATG
781 GAGAAGACTATGTTATGGTGCCTATTCTAGAAAAGAATGGGAAGAATG
* * *
98326 TTTTGGTACCCAATCTTGAAAAGAATGGAGACTGTTACGAGAGTCAATGCTTACCTTACTTAAGG
1 TTTTGGTACCCAATCTGGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTACCATACTTAAGG
* *
98391 GATGAACTTTAATTTTAAGGAATATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATTAA
66 GATGAACTTTAATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
* * ** * *
98456 TATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGCCTAATCATGAAATGAATGAAGATCATT
131 TATCATTTATCCTAATGAGGAAAATGTGTTTAGTGTGCCTAATCACAAAAAGAATAAAGATCATT
*
98521 ACTAGAATCCATGTTGGACTCATTTGAGGCACGAACTTAGACTTAACAAAAATTGGAAGGAAGAA
196 ACTAGAATCCATGTTGGACTCATTTGAGGCACGAACTTAGACTTAACAAAAATTAGAAGGAAGAA
* * *
98586 AGCCTTTCCTACAAAATCAAAGCATCAATATTGTCTATCCTAATGAGAAGACTATGTTTATGGTG
261 AGCCTTTCCTACAAAACCAAAGCATCAATATTGCCTATCCTAATGAGAAGACAATGTTTATGGTG
*
98651 CCTAATCCTGG-AAAGACTAGGGATT-GTTATGACTATTCATGTTTGTCATATTTAAGAGAGCAA
326 CCTAAT-CTGGAAAAGAATAGGGATTAG-TATGACTATTCATGTTTGTCATATTTAAGAGA-CAA
* * *
98714 ACTTTGATTCTATCAAAAACGG-TGAAAAAAAAAGCTTTTCTTGCGACTCCAAAACATCAATGTC
388 ACTTTGATTCTAACAAAAACGGTTG-AAAAAAAAGCTTTTCTTACGACACCAAAACATCAATGTC
*** * *
98778 ATGTATCATAATGCAGAAAACGT-GTTCTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACA
452 ATGTATCATAAAAAAGAAAACGTAATT-TTGGTTCCCAATCTTGAAAAGAATGGAGACTGATACA
* * * * * *
98842 AGAATCGATGCTTGTCATATTTAAGGGATTAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAG
516 ACAATCAATGCTTGCCATATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAG
* ** * * * *
98907 ATTTTCATGCAAAGGAAAATTGTCAATATCATTTATCCTTATGAGGAGAATGTGTTTATGGTGCC
581 ATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAAGAAAATGTGTTTATAGTGCC
98972 TAATCACAAAATGAATGAAGATCATTACTAGAATGCATGTTTGA-ACT-TTTGAGGCACGAACTT
646 TAATCACAAAATGAATGAAGATCATTACTAGAATGCATGTTTGACA-TATTTGAGGCACGAACTT
* * * * *
99035 AGACTTTCCAAAAATTGGGGGGAAGAAAGCTTTTTTTGCGACACCAAAGCATTAACATCATGTAT
710 AGACTTTCCAAAAATTGGGGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAACATCATCTAT
*
99100 CCTTATGAGAAGACTAT
775 CCTAATGAGAAGACTAT
99117 ATTTTTCTTG
Statistics
Matches: 696, Mismatches: 89, Indels: 12
0.87 0.11 0.02
Matches are distributed among these distances:
827 1 0.00
828 426 0.61
829 269 0.39
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (828 bp):
TTTTGGTACCCAATCTGGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTACCATACTTAAGG
GATGAACTTTAATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
TATCATTTATCCTAATGAGGAAAATGTGTTTAGTGTGCCTAATCACAAAAAGAATAAAGATCATT
ACTAGAATCCATGTTGGACTCATTTGAGGCACGAACTTAGACTTAACAAAAATTAGAAGGAAGAA
AGCCTTTCCTACAAAACCAAAGCATCAATATTGCCTATCCTAATGAGAAGACAATGTTTATGGTG
CCTAATCTGGAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCATATTTAAGAGACAAACT
TTGATTCTAACAAAAACGGTTGAAAAAAAAGCTTTTCTTACGACACCAAAACATCAATGTCATGT
ATCATAAAAAAGAAAACGTAATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGATACAACAAT
CAATGCTTGCCATATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTT
CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAAGAAAATGTGTTTATAGTGCCTAATC
ACAAAATGAATGAAGATCATTACTAGAATGCATGTTTGACATATTTGAGGCACGAACTTAGACTT
TCCAAAAATTGGGGGGAAGAAAGCATTTCTTGCGAAACCAAAGCATCAACATCATCTATCCTAAT
GAGAAGACTATGTTATGGTGCCTATTCTAGAAAAGAATGGGAAGAATG
Found at i:100064 original size:241 final size:239
Alignment explanation
Indices: 99622--100096 Score: 704
Period size: 241 Copynumber: 2.0 Consensus size: 239
99612 AAAAGATTAC
* ** * *
99622 GGATTAGTACGACTATTCATGTTTGTCTTATTTTGGAGGCAAACTTTGATTCTATCAAAAACGGT
1 GGATTAGTAAGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAACAAAAACGGT
* *
99687 TGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGAATTGTA
66 TGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCATATATCCTAAGGAAGGAATTGTA
* * *
99752 TTCTTGGTTCCTATTCTCGAAAAGAATGGAGACTGTTACGAGAATCGGAGCTTGTCAAATTTAAA
131 TTCTTGGTCCCAATTCTC-AAAAGAATAGAGACTGTTACGAGAATCGGAGCTTGTCAAATTTAAA
*
99817 GGATGAATTTTGATTTTAGGGAAAATAAGGCCAAGAAAAAGAATGG
195 GGATGAATTTTGATTTTAAGGAAAATAAGG-CAAGAAAAAGAATGG
*
99863 GGATTAGTAAGACTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTAACAAAAACGGT
1 GGATTAGTAAGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAACAAAAACGGT
* * *
99928 TGAAAGAAAAGCTTTTCTTGCGACATCAAAGCATTAATGTCATATATCCTAAGGAAGGGAA-TGT
66 TGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCATATATCCTAAGGAA-GGAATTGT
* *
99992 ATTCTTGGATCCCAATTCT-AAAACGAATAGAGACTGTTACGAGAATC-GATGTTTGTCATATTT
130 ATTCTTGG-TCCCAATTCTCAAAA-GAATAGAGACTGTTACGAGAATCGGA-GCTTGTCAAATTT
* *
100055 AAGGGATGAATTTTGATTTTAAGGAAAATAAGGCAAGGAAAA
192 AAAGGATGAATTTTGATTTTAAGGAAAATAAGGCAAGAAAAA
100097 TATTTCCATG
Statistics
Matches: 211, Mismatches: 19, Indels: 9
0.88 0.08 0.04
Matches are distributed among these distances:
240 14 0.07
241 185 0.88
242 12 0.06
ACGTcount: A:0.36, C:0.12, G:0.20, T:0.31
Consensus pattern (239 bp):
GGATTAGTAAGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAACAAAAACGGT
TGAAAGAAAAGCTTTTCTTACGACACCAAAGCATCAATGTCATATATCCTAAGGAAGGAATTGTA
TTCTTGGTCCCAATTCTCAAAAGAATAGAGACTGTTACGAGAATCGGAGCTTGTCAAATTTAAAG
GATGAATTTTGATTTTAAGGAAAATAAGGCAAGAAAAAGAATGG
Found at i:103565 original size:19 final size:20
Alignment explanation
Indices: 103521--103573 Score: 90
Period size: 20 Copynumber: 2.7 Consensus size: 20
103511 GTTACAAGCA
103521 ATGTATCGATACAATTCATC
1 ATGTATCGATACAATTCATC
*
103541 ATGTATCGATACAATTCCT-
1 ATGTATCGATACAATTCATC
103560 ATGTATCGATACAA
1 ATGTATCGATACAA
103574 ACAGTAGTAG
Statistics
Matches: 32, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
19 14 0.44
20 18 0.56
ACGTcount: A:0.36, C:0.19, G:0.11, T:0.34
Consensus pattern (20 bp):
ATGTATCGATACAATTCATC
Found at i:106159 original size:13 final size:13
Alignment explanation
Indices: 106141--106165 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
106131 ATAGTAACCA
106141 TGTATCGATACAT
1 TGTATCGATACAT
106154 TGTATCGATACA
1 TGTATCGATACA
106166 GGGAATGTTG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:111632 original size:20 final size:20
Alignment explanation
Indices: 111607--111660 Score: 83
Period size: 20 Copynumber: 2.7 Consensus size: 20
111597 GTTACAAGCA
111607 ATGTATCGATACAAT-TCAT
1 ATGTATCGATACAATGTCAT
*
111626 CATGTATCGATACAATGTCCT
1 -ATGTATCGATACAATGTCAT
111647 ATGTATCGATACAA
1 ATGTATCGATACAA
111661 ACAGTGGTAG
Statistics
Matches: 32, Mismatches: 1, Indels: 2
0.91 0.03 0.06
Matches are distributed among these distances:
20 29 0.91
21 3 0.09
ACGTcount: A:0.35, C:0.19, G:0.13, T:0.33
Consensus pattern (20 bp):
ATGTATCGATACAATGTCAT
Found at i:111714 original size:20 final size:20
Alignment explanation
Indices: 111689--111741 Score: 72
Period size: 19 Copynumber: 2.7 Consensus size: 20
111679 CTGCCAGTTT
* **
111689 CATGTATCGATACAATTGTC
1 CATGTATCGATACAAGTGAA
111709 CATGTATCGATAC-AGTGAA
1 CATGTATCGATACAAGTGAA
111728 CATGTATCGATACA
1 CATGTATCGATACA
111742 TTATACAAAG
Statistics
Matches: 29, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
19 16 0.55
20 13 0.45
ACGTcount: A:0.34, C:0.19, G:0.17, T:0.30
Consensus pattern (20 bp):
CATGTATCGATACAAGTGAA
Found at i:112625 original size:159 final size:158
Alignment explanation
Indices: 112456--114532 Score: 429
Period size: 159 Copynumber: 13.1 Consensus size: 158
112446 CTATTCATAT
* * *
112456 TTGTCTTATTTAAGAGACAAACTTTGATTCTATA-AAAAACGGTTTAAAGAAAAGCTTTTCTTAT
1 TTGTCATATTTAAGAGACAAACTTTGATTCTA-AGAAAAACGGTTGAAAGAAAAGCTTTTCTTAC
* * *
112520 GACACCAAAGCATCAATGTCATGTATCCTAATAAAGGGAATGTATTCTTGGTTCCCAATCTTGAA
65 GACACCAAAGCATCAATATCATATATCCTAATAAAGGGAATGTATT-TTGGTGCCCAATCTTGAA
112585 AAGAATGGAGACT-GTTATGAGAATCGATGC
129 AAGAATGGAGACTAGTTATGAGAATC-ATGC
* ** * * * * *** * *
112615 TTGTCATATTTAAGGGATGAATTTTTATTTTAAGGAAAATAAGGCAAAAAGAATA---TTTCTAC
1 TTGTCATATTTAAGAGACAAACTTTGATTCTAA-GAAAA-ACGGTTGAAAGAAAAGCTTTTCT-T
* * ** * * * * * * **
112677 ACAAAAGAAAATCATCAATATCATTTATCCTAAT-GAGGAGAATGTGTTTATAGTGCCTAATCAC
63 ACGACACCAAAGCATCAATATCATATATCCTAATAAAGG-GAATGTATTT-TGGTGCCCAATCTT
* * * *
112741 CAAATGAATGAAGA-TCA-TTACT-AGAATACATGT
126 GAAAAGAATGGAGACT-AGTTA-TGAGAAT-CATGC
* * * ** * * *
112774 TTGTC-TCCTTTGAG-GCACAAACTTAGACTT-TACA-AAAATTGGGTGGAAG-AAAGCGTTTCT
1 TTGTCAT-ATTTAAGAG-ACAAACTTTGA-TTCTA-AGAAAAACGGTTGAAAGAAAAGCTTTTCT
* * * * * * *** * *
112834 TGC-ATAACCAAAGCATCGATATCGTCTATCATAATGAGAAGACTATGT-TTATGGTGCCTAATC
62 TACGA-CACCAAAGCATCAATATCATATATCCTAAT-A-AAGGGAATGTATTTTGGTGCCCAATC
* * * *
112897 TTGAAAATAATGGAGACTAG-TATGACTATTCATGT
124 TTGAAAAGAATGGAGACTAGTTATGA-GAATCATGC
* * *
112932 TTGTCTTATTTACA-AGACAAACTTTGATTCTAACAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
1 TTGTCATATTTA-AGAGACAAACTTTGATTCTAAGAAAAACGGTTGAAAGAAAAGCTTTTCTTAC
* ** * *
112996 GACACCAAAGCATCAATGTCATATATCCTAAGGACGGGAATGTATTCTTGGTTCCCAAT-TATGA
65 GACACCAAAGCATCAATATCATATATCCTAATAAAGGGAATGTATT-TTGGTGCCCAATCT-TGA
*
113060 AAAGAATAGAGACT-GTTATGAGAATCGATGC
128 AAAGAATGGAGACTAGTTATGAGAATC-ATGC
* ** * * * *
113091 TTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAATA-GG--GCAAAGAAAATG-TTTCCA
1 TTGTCATATTTAAGAGACAAACTTTGATTCTAA-GAAAA-ACGGTTG-AAAGAAAA-GCTTTTCT
* * * ** ** * * * * **
113152 TGCAAAATAAAATAATTAATATCATTTATCCTAAT-GAGGAGAATGTATTTATAGTGCCTTATC-
62 TACGACACCAAAGCATCAATATCATATATCCTAATAAAGG-GAATGTATTT-TGGTGCCCAATCT
** * **
113215 ACAAAATGAATGAAGA-TCA-TTACT-AGAATCCATAT
125 TGAAAA-GAATGGAGACT-AGTTA-TGAGAAT-CATGC
* * * * * *
113250 TTGTC-TCATTTGAG-GTACGAACTTAGACTT-TACA-AAAATA-GAG-AGGAAG-AAAGCCTTT
1 TTGTCAT-ATTTAAGAG-ACAAACTTTGA-TTCTA-AGAAAA-ACG-GTTGAAAGAAAAGCTTTT
* * * * * *** * * *
113308 CTTACGAAACCAAACCATCAATACCGTCTATCCTAATGAGAAGACTATGT-TTATGGTTCCTAAT
60 CTTACGACACCAAAGCATCAATATCATATATCCTAAT-A-AAGGGAATGTATTTTGGTGCCCAAT
* * * * * * * *
113372 CCTAAAAAGACTGGGGATTA-TTATGACTATTCATGT
123 CTTGAAAAGAATGGAGACTAGTTATGA-GAATCATGC
* ** * *
113408 TTGTCTTATTTAAGAGAGCAAACTTTGATTCTATCAAAAACGG-TGAAAAAGAAAGCTTTTCTTG
1 TTGTCATATTTAAGAGA-CAAACTTTGATTCTAAGAAAAACGGTTGAAAGA-AAAGCTTTTCTTA
* * * * * * *
113472 CGACTCCAAAGCATCAA-AGTCATGTATCCTAATGAAGAGAATGTGTTCTTAGTTCCCAATCTTG
64 CGACACCAAAGCATCAATA-TCATATATCCTAATAAAGGGAATGTATT-TTGGTGCCCAATCTTG
*
113536 AAAAGAATGGAGACT-GTTATGAGAATTGATGC
127 AAAAGAATGGAGACTAGTTATGAGAA-TCATGC
* ** * * * ** * * *
113568 TTGTCATATTTAAAAGATTAATTTTGATTTTAGGGAAAATA-GGGCG-AAGAAAAGATTTTCATG
1 TTGTCATATTTAAGAGACAAACTTTGATTCTA-AGAAAA-ACGGTTGAAAGAAAAGCTTTTCTTA
* * ** * * * * * * * * *
113631 CAAAAGAAAATCATCATTATTAT-TAATCCTAAT-GAGGAGAATGTGTTTATTGTGTCTAA--TG
64 CGACACCAAAGCATCAATATCATAT-ATCCTAATAAAGG-GAATGTATTT-TGGTGCCCAATCTT
* * ** *
113692 GCAAAAGGAAT--AAATTTTTTAACT-AGAATCCATGT
126 G-AAAA-GAATGGAGACTAGTT-A-TGAGAAT-CATGC
* * * ** ** *
113727 TTGTC-TCATTTGAG-GCACGAACTTAGACTTC-ACA-AAAATTGGTAAAAAGAAAA-CCTTTCT
1 TTGTCAT-ATTTAAGAG-ACAAACTTTGA-TTCTA-AGAAAAACGGTTGAAAGAAAAGCTTTTCT
* * * * * *** * * *
113787 TGCGAAACCAAAGCATCAATATCATGTATCCTTATGCGAAGACTATGT-TTATAGTGCCTAATCT
62 TACGACACCAAAGCATCAATATCATATATCCTAAT--AAAGGGAATGTATTTTGGTGCCCAATCT
* * * * * *
113851 AGAAAATAATGGGGATTAG-TATGACTATTCATG-
125 TGAAAAGAATGGAGACTAGTTATGA-GAATCATGC
* * ** * * * * *
113884 -TGTCTTATTTAAGACACAAACTTTGATTCTATCAAAAACAGTTTAAAGAAAAGCTTTACTTGCA
1 TTGTCATATTTAAGAGACAAACTTTGATTCTAAGAAAAACGGTTGAAAGAAAAGCTTTTCTTACG
* * * * *
113948 ACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTCTTAGTTCCCAATCTTGAAA
66 ACACCAAAGCATCAATATCATATATCCTAATAAAGGGAATGTATT-TTGGTGCCCAATCTTGAAA
* *
114013 AGAATAGAGACTA-CTATGAGAATCGATGC
130 AGAATGGAGACTAGTTATGAGAATC-ATGC
* ** * * ** * *
114042 TTGTCATATTTTAAGGGATGAATTTTGATTTTAAGGAAAATA-GG--GCAAAGAAAATATTTCCA
1 TTGTCATA-TTTAAGAGACAAACTTTGATTCTAA-GAAAA-ACGGTTG-AAAGAAAAGCTTTTCT
* * * ** ** * * * * *
114104 TGCAAAAGAAAATAATCAATATCATTTATCCTAAT-GAGGAGAATGTGTTTATAGTGCCTAATC-
62 TACGACACCAAAGCATCAATATCATATATCCTAATAAAGG-GAATGTATTT-TGGTGCCCAATCT
** * * * *
114167 ACAAAATGAAT-GAAAATCA-TTACT-AGAATCCGTGT
125 TGAAAA-GAATGGAGACT-AGTTA-TGAGAAT-CATGC
* * ** * * *
114202 TTGTC-TCATTTAAG-GCACGAACTTAGATAT-TATA-AAAATTGGTGGGAAG-AAAGCCTTTTT
1 TTGTCAT-ATTTAAGAG-ACAAACTTTGAT-TCTA-AGAAAAACGGTTGAAAGAAAAG-CTTTTC
* * * * * * * * *** * *
114262 TTGCAAAAGCAAAGCGTCAATATCATGTATCTTTATGAGAAGACTATGT-TTATGGTGCCTAATC
61 TTACGACACCAAAGCATCAATATCATATATCCTAAT-A-AAGGGAATGTATTTTGGTGCCCAATC
* * * * * *
114326 GTGAAAAGAATGGGGAATAGTT-TGACTATTCATGT
124 TTGAAAAGAATGGAGACTAGTTATGA-GAATCATGC
* ** * * *
114361 TTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAAAGAAAAGCTTTTCTTGCA
1 TTGTCATATTTAAGAGACAAACTTTGATTCTAAGAAAAACGGTTGAAAGAAAAGCTTTTCTTACG
* * * ** * *
114426 ACACTAAAGCATCAATTTCATGTATCCTAAGGAAGGGAATGAATTCTTGGTTCCCAATCTTGAAA
66 ACACCAAAGCATCAATATCATATATCCTAATAAAGGGAATGTATT-TTGGTGCCCAATCTTGAAA
* *
114491 AGAATGGAAACT-GTTATGAGAA-CGATGT
130 AGAATGGAGACTAGTTATGAGAATC-ATGC
*
114519 TTGTCACATTTAAG
1 TTGTCATATTTAAG
114533 GGATGAATTT
Statistics
Matches: 1382, Mismatches: 385, Indels: 303
0.67 0.19 0.15
Matches are distributed among these distances:
155 11 0.01
156 41 0.03
157 100 0.07
158 310 0.22
159 631 0.46
160 256 0.19
161 30 0.02
162 3 0.00
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.32
Consensus pattern (158 bp):
TTGTCATATTTAAGAGACAAACTTTGATTCTAAGAAAAACGGTTGAAAGAAAAGCTTTTCTTACG
ACACCAAAGCATCAATATCATATATCCTAATAAAGGGAATGTATTTTGGTGCCCAATCTTGAAAA
GAATGGAGACTAGTTATGAGAATCATGC
Found at i:112983 original size:476 final size:475
Alignment explanation
Indices: 112048--119707 Score: 10029
Period size: 476 Copynumber: 16.1 Consensus size: 475
112038 GATCTTAACA
* *
112048 CAAAGCATCAATGTCATGTATCCTAATG-AGGAGAATGTGTATTCTTGTTTCCTAATCTTGAAAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGG-GAATGTG--TTCTTGGTTCCCAATCTTGAAAA
* * * *
112112 GAATGGAGACTGTTACGAGAATCGGA-GCTTGTCAAATTTAAAGAATGAATTTTGATTTTAGGGA
63 GAATGGAGACTGTTACGAGAATC-GATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGA
112176 AAATA-GGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGA
127 AAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGA
* * * *
112240 GAATGTGTTTATAGTGCCTAATTAGAAAATGAATGGAGATCATTACTAGAATCCAT-TTTCGACT
192 GAATGTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT-GACT
* * * *
112304 CACTTGAGGCACAAACTTAGACTTTACAAAAATTGGCGT-GAAGGAAGCCTTTCTTGTAAAACCA
256 CATTTGAGGCACGAACTTAGACTTTACAAAAATTGG-GTGGAAGAAAGCCTTTCTTG-CAAACCA
* * * * * *
112368 AAGTATCAATATCATGTATCCTTATGAGAAGACTAAGTTTATGGTGCCAAATCTTAAAAAGAATG
319 AAGCATCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATG
* * *
112433 GGGATTAGTAGGACTATTCATATTTGTCTTATTTAAGAGACAAACTTTGATTCTATAAAAAACGG
384 GGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
* **
112498 TTTAAAGAAAAGCTTTTCTTATGACAC
449 TTGAAAGAAAAGCTTTTCTTGCGACAC
* *
112525 CAAAGCATCAATGTCATGTATCCTAATAAAGGGAATGTATTCTTGGTTCCCAATCTTGAAAAGAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
* *
112590 TGGAGACTGTTATGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTTATTTTAAGGAAAAT
66 TGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAAT
* * * **
112655 AAGGCAAA-AAGAATATTTCTACACAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAA
131 AGGGCAAAGAA-AAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAA
* * * * *
112719 TGTGTTTATAGTGCCTAATCACCAAATGAATGAAGATCATTACTAGAATACATGTTTGTCTCCTT
195 TGTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATT
* *
112784 TGAGGCACAAACTTAGACTTTACAAAAATTGGGTGGAAGAAAGCGTTTCTTGCATAACCAAAGCA
260 TGAGGCACGAACTTAGACTTTACAAAAATTGGGTGGAAGAAAGCCTTTCTTGCA-AACCAAAGCA
* * * * * * * *
112849 TCGATATCGTCTATCATAATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAATAATGGAGAC
324 TCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
*
112914 TAGTATGACTATTCATGTTTGTCTTATTTACA-AGACAAACTTTGATTCTAACAAAAACGGTTGA
389 TAGTATGACTATTCATGTTTGTCTTATTTA-AGAGACAAACTTTGATTCTATCAAAAACGGTTGA
112978 AAGAAAAGCTTTTCTTGCGACAC
453 AAGAAAAGCTTTTCTTGCGACAC
* * * *
113001 CAAAGCATCAATGTCATATATCCTAAGGACGGGAATGTATTCTTGGTTCCCAAT-TATGAAAAGA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCT-TGAAAAGA
* *
113065 ATAGAGACTGTTATGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAA
65 ATGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAA
* * *
113130 TAGGGCAAAGAAAATG-TTTCCATGCAAAATAAAATAATTAATATCATTTATCCTAATGAGGAGA
130 TAGGGCAAAGAAAA-GATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGA
* * * * *
113194 ATGTATTTATAGTGCCTTATCACAAAATGAATGAAGATCATTACTAGAATCCATATTTGTCTCAT
194 ATGTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT
* * * * * *
113259 TTGAGGTACGAACTTAGACTTTACAAAAATAGAGAGGAAGAAAGCCTTTCTTACGAAACCAAACC
259 TTGAGGCACGAACTTAGACTTTACAAAAATTGGGTGGAAGAAAGCCTTTCTTGC-AAACCAAAGC
* * * * * *
113324 ATCAATACCGTCTATCCTAATGAGAAGACTATGTTTATGGTTCCTAATCCTAAAAAGACTGGGGA
323 ATCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGA
*
113389 TTATTATGACTATTCATGTTTGTCTTATTTAAGAGAGCAAACTTTGATTCTATCAAAAACGG-TG
388 TTAGTATGACTATTCATGTTTGTCTTATTTAAGAGA-CAAACTTTGATTCTATCAAAAACGGTTG
* *
113453 AAAAAGAAAGCTTTTCTTGCGACTC
452 AAAGA-AAAGCTTTTCTTGCGACAC
* * *
113478 CAAAGCATCAAAGTCATGTATCCTAATGAAGAGAATGTGTTCTTAGTTCCCAATCTTGAAAAGAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
* * ** * *
113543 TGGAGACTGTTATGAGAATTGATGCTTGTCATATTTAAAAGATTAATTTTGATTTTAGGGAAAAT
66 TGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAAT
* * * * *
113608 AGGGCGAAGAAAAGATTTTCATGCAAAAGAAAATCATCATTATTATTAATCCTAATGAGGAGAAT
131 AGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
* ** * ** *
113673 GTGTTTATTGTGTCTAATGGCAAAAGGAAT-AA-ATTTTTTAACTAGAATCCATGTTTGTCTCAT
196 GTGTTTATTGTGCCTAATCACAAAATGAATGAAGA-TCATT-ACTAGAATCCATGTTTGACTCAT
* ** *
113736 TTGAGGCACGAACTTAGACTTCACAAAAATT-GGTAAAAAGAAAACCTTTCTTGCGAAACCAAAG
259 TTGAGGCACGAACTTAGACTTTACAAAAATTGGGT-GGAAGAAAGCCTTTCTTGC-AAACCAAAG
* * * *
113800 CATCAATATCATGTATCCTTATGCGAAGACTATGTTTATAGTGCCTAAT-CTAGAAAATAATGGG
322 CATCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGG
* *
113864 GATTAGTATGACTATTCATG--TGTCTTATTTAAGACACAAACTTTGATTCTATCAAAAACAGTT
386 GATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTT
* * *
113927 TAAAGAAAAGCTTTACTTGCAACAC
451 GAAAGAAAAGCTTTTCTTGCGACAC
* *
113952 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTCTTAGTTCCCAATCTTGAAAAGAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
* ** *
114017 TAGAGACTACTATGAGAATCGATGCTTGTCATATTTTAAGGGATGAATTTTGATTTTAAGGAAAA
66 TGGAGACTGTTACGAGAATCGATGCTTGTCATA-TTTAAGGGATGAATTTTGATTTTAAGGAAAA
* *
114082 TAGGGCAAAGAAAATATTTCCATGCAAAAGAAAATAATCAATATCATTTATCCTAATGAGGAGAA
130 TAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAA
* * * *
114147 TGTGTTTATAGTGCCTAATCACAAAATGAATGAAAATCATTACTAGAATCCGTGTTTGTCTCATT
195 TGTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATT
* * * *
114212 TAAGGCACGAACTTAGA-TATTATAAAAATT-GGTGGGAAGAAAGCCTTTTTTTGCAAAAGCAAA
260 TGAGGCACGAACTTAGACT-TTACAAAAATTGGGT-GGAAGAAAGCC-TTTCTTGC-AAACCAAA
* * * *
114275 GCGTCAATATCATGTATCTTTATGAGAAGACTATGTTTATGGTGCCTAATCGTGAAAAGAATGGG
321 GCATCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGG
* * *
114340 GAATAGTTTGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTT
386 GATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTT
*
114405 GAAAGAAAAGCTTTTCTTGCAACAC
451 GAAAGAAAAGCTTTTCTTGCGACAC
* * * **
114430 TAAAGCATCAATTTCATGTATCCTAAGGAAGGGAATGAATTCTTGGTTCCCAATCTTGAAAAGAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
* * * * * *
114495 TGGAAACTGTTATGAGAA-CGATGTTTGTCACATTTAAGGGATGAATTTTGATTTTATGGAAGAT
66 TGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAAT
*** * * * * * * * *
114559 AGGG-TTTGTAGAGATTTCCTTGCAAATGAAAATCATCAATATCATTTATCTTAATAAGGATATT
131 AGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
* *
114623 GTGTTTATTGTGCCTAATCATAAAATGAATGAAGATCATTACTAGAATCCATGCTTGACTCATTT
196 GTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTT
* * * * *
114688 GAGGCACGAACTTAGACTTTACAAAAATT-AGTGGGAGGAAAGCCTTTCTTGTGAAACCAAAACG
261 GAGGCACGAACTTAGACTTTACAAAAATTGGGT-GGAAGAAAGCCTTTCTTG-CAAACCAAAGCA
* * *
114752 TCAATATCGTGC-ACCCTTATGAGAAGACTATGTTTACGGTGCCTAATCCTGAAAAGAATGGGGA
324 TCAATATCAT-CTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGA
* * * * * ** *
114816 TTACTATGACTATTAATATTTGTCTTATTTAAAAGACAAACTTTGATTCTAACAAAAATTGTAGA
388 TTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGA
*
114881 AAGAAAAGCTTTTTTTGCGACAC
453 AAGAAAAGCTTTTCTTGCGACAC
* *
114904 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCTTGAAAGGAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
* * * * *
114969 TGGAGAGTGTTACAAGAGTTGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGTAAAT
66 TGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAAT
* *
115034 AGGGTAAAGAAAAGATTTCCATGCAAAAGAAAATCATTAATATCATTTATCCTAATGAGGAGAAT
131 AGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
* ** * ** *
115099 GTGTTTATTGTGTCTAATGGCAAAAGGAAT-AA-ATTTTTTAACTAGAATCCATGTTTGTCTCAT
196 GTGTTTATTGTGCCTAATCACAAAATGAATGAAGA-TCATT-ACTAGAATCCATGTTTGACTCAT
* **
115162 TTGAGGCACGAACTTAGACTTCACAAAAATT-GGTAAAAAGAAAGCCTTTCTTGCGAAACCAAAG
259 TTGAGGCACGAACTTAGACTTTACAAAAATTGGGT-GGAAGAAAGCCTTTCTTGC-AAACCAAAG
* * * *
115226 CATCAATATCATGTATCCTTATGCGAAGACAATGTTTATAGTGCCTAATCCTG-AAAGTAATGGG
322 CATCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAG-AATGGG
* * *
115290 GATTAGTATAACTATTCATGTTTGCCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTT
386 GATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTT
* *
115355 GAAA-AAAAGCCTTTCTTGTGACAC
451 GAAAGAAAAGCTTTTCTTGCGACAC
* * * * *
115379 CAAAGCATCAATGTCATATATTCTATTGAAGGGAATGTGTTTTTGGTTCCCAATCTAG-AAAGCA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAG-A
* *
115443 AT---G--TG-TACGTGAATCGATGCTTGTTC-TATTTAAGGGATGAATCTTGATTTTAAGGAAA
65 ATGGAGACTGTTACGAGAATCGATGCTTG-TCATATTTAAGGGATGAATTTTGATTTTAAGGAAA
* * * *
115501 AAAGGGCAAAGAAAAGTTTTTCATGCGAAAGAAAATCA-CTAATATCATTTATCCTAATGAGGAG
129 ATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATC-AATATCATTTATCCTAATGAGGAG
* * *
115565 AATGTGTTTATTGTGTCTAATCACAAAAGGAATGAAGATCATTACTAGAATCCATGTTGGACTCA
193 AATGTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCA
* ** * * * *
115630 TTTGAAGCATAAACATAGACATTACAAAAATTGGAG-GGAAAAAAGCCTTTCTTGCTGAACCAAA
258 TTTGAGGCACGAACTTAGACTTTACAAAAATTGG-GTGGAAGAAAGCCTTTCTTGC-AAACCAAA
* * * * *
115694 GCATCAATATCGTCTATCCTAATGAGAAGACTATATTTATAGTGCCTAATCCTGAAAAAAATGGG
321 GCATCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGG
* * *
115759 GATTAGTATGACTATACATGTTTGTCTTATTTAAGATACAAACTTTGATTCTATCAAAAACGGTG
386 GATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTT
* *
115824 GAAAGAATAGCTTTTCTTGCTATC-C
451 GAAAGAAAAGCTTTTCTTGCGA-CAC
* * * * * * *
115849 CAAAGCACCAATGTCACGCATCCTAATAAACGGAATATGTTTTTGGTTCCCAATCTTGAAAAGAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
* * * * *
115914 TGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAATGAAAAT
66 TGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAAT
115979 AGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
131 AGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
* * * *
116044 GTGTTTATTGTGTCTAATCACAACATGAAAGAAGATCATTACTAGAATCCATGTTGGACTCATTT
196 GTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTT
*
116109 GAGGCACGAACTTAGACTTTAC-AAAATTGGAG-GGAAGAAAGCCTTTCTTGCGAAACAAAAGCA
261 GAGGCACGAACTTAGACTTTACAAAAATTGG-GTGGAAGAAAGCCTTTCTTGC-AAACCAAAGCA
* *
116172 TCAATATCATCTATCCTAATGAGAAGACTATATTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
324 TCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
* *
116237 TAGTATGACTATTTATGTTTGTCTTATTTAAGAGAGCAAACTTTGATTCTATCAAAAACGGTGGA
389 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGA-CAAACTTTGATTCTATCAAAAACGGTTGA
116302 AAGAAAAGCTTTTCTTGCGACAC
453 AAGAAAAGCTTTTCTTGCGACAC
* * * * *
116325 CAAAGCATCGATGTCATGTATCCTAATGAAGAGAATGTATTCTTGTTTCCTAATCTTGAAAAGAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
* * * *
116390 TGGAGACTGTTACGAGAATTGGA-GCTTGTCAAATTTAAAGGATGAATTTTGATTTTAGGGAAAA
66 TGGAGACTGTTACGAGAA-TCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAA
* *
116454 TAGGGTAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATAAGGAGAA
130 TAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAA
* * *
116519 TGTGTTTGTTGTGTCTAATCACAAAAAGAATGAAGATCATTACTAGAATCCATGTTTGACTCATT
195 TGTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATT
* * *
116584 TGAGGCACGAACTTAGACTTTTCAAAAATTGTAG-GGAAGAAAGCCTTTCTTGTGAAACCAAAGC
260 TGAGGCACGAACTTAGACTTTACAAAAATTG-GGTGGAAGAAAGCCTTTCTTG-CAAACCAAAGC
* * * * * **
116648 ATCAATATCATGTACCCTTATGAGAAGACTATGTTTACGATTCCTAATCCTGAAAAGAATTAGGA
323 ATCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGA
* * * * *
116713 TTAGTATCACTATTAATGTTTGTCTTATTTAAAAGACAAACTTTGATTCTAACAAAAACGGTAGA
388 TTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGA
* *
116778 AAGAAAAGCTTTTTTTGCTACAC
453 AAGAAAAGCTTTTCTTGCGACAC
* * *
116801 CAAA-CATCAATGTCATGTATCCTAATGAAGGGAAAGTGTTTTTGGTTCCCAATCTTGAAAGGAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
* * *
116865 TGGAGACTGTTACGAGAATTGATCCTTGTCATATTTAAAGGATGAATTTTGATTTTAAGGAAAAT
66 TGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAAT
* *
116930 AGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATAAGGAGAAT
131 AGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
* * * * *
116995 GTGTTTATTGTGTCTAATCGCAAAAGGAATGAAGATCATTACTAGAATCCATGTTTGTCTAATTT
196 GTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTT
* * * * *
117060 GAGGCAGGAACTGAGACTTCACAAAAATT-GGTAGGAAGAAAGCCTTTCTTGCGAAACCGAAGCG
261 GAGGCACGAACTTAGACTTTACAAAAATTGGGT-GGAAGAAAGCCTTTCTTGC-AAACCAAAGCA
* * * *
117124 TCAATATCATGTATCCTTATGTGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGCAT
324 TCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
* * * * *
117189 TAGGATGACTATTCATGTTTGGCATATTAAAGAGACAAACTTTGATTCTACCAAAAACGGTTGAA
389 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAA
* *
117254 AGAAACGCTTTTCTTGTGACAC
454 AGAAAAGCTTTTCTTGCGACAC
* * * * *
117276 CAAAGCATCAATGTCATATATCCTAATGAAGGGAATGCGTTTTTGGTTCCCAATCTAGAAAGGAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
** * *
117341 TGTTGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGTTGAATCTTGATTTTAAGGAAAAT
66 TGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAAT
* * *
117406 AGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCACCAATATCATTTATCCTAATGAGGATAAT
131 AGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
* * *
117471 GTGTTTATTGTGTCTAATCACAAAAGGAATGAAGATCATTACTAGAATCCATGTTGGACTCATTT
196 GTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTT
* * * *
117536 GAGGCATGAACTTAGACTTTACAAAAATTGGAG-AGAAGAATGCCTTTCATGCAAATCCAAAGCA
261 GAGGCACGAACTTAGACTTTACAAAAATTGG-GTGGAAGAAAGCCTTTCTTGCAAA-CCAAAGCA
* * *
117600 TCAATATCGTCTATCCTAATGAGAAGACTATATTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
324 TCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
* * *
117665 TAGTATGACTATTCAGGTTTGTCTTAATTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAA
389 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAA
*
117730 AGAATAGCTTTTCTTGCGATC-C
454 AGAAAAGCTTTTCTTGCGA-CAC
*** * *
117752 CAAAGCATCAATGTCACACATCCTAATGAAGGGAATATGTTTTTGGTTCCCAATCTT-AAAAGGA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAA-GA
* * * **
117816 ATGGAGACTGTTACGAGAATCAATGCTTGTCTTATTTAA-AGATAGAACATTGATTTTAAGGAAA
65 ATGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGAT-GAATTTTGATTTTAAGGAAA
* *
117880 ATAGGGCAAAGAAAAGATTTCAATGCAAAAGAAAATCATAAATATCA-TTATCCTAATGAGGAGA
129 ATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGA
* *
117944 ATGTGTTTATTGTGCCT-ATCACAAAAGGAATGAAGATCATTACTAGAATCCATGTTGGACTCAT
194 ATGTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT
* * ** * *
118008 TTGAGGCTCGAACTTAAACAAACTTTACAAAAATTGGAAGAAAGAAAGCCTTTCTTGTGAAACCA
259 TTGAGGCACGAACTT----AGACTTTACAAAAATTGGGTGGAAGAAAGCCTTTCTTG-CAAACCA
* * * **
118073 AAGCATCAATATCGTCTATCCTAATGAGAAGACTATATTTATGGTGCCTAATTATGAAAAGAATG
319 AAGCATCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATG
* * *
118138 GGGATTAGTATGACTACTCATGTTTGTCTTATTTAAGAGAGCAAACTTTGATTCTACCAAAATCG
384 GGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGA-CAAACTTTGATTCTATCAAAAACG
*
118203 G-TGAAAAGAAAAGCTTTTCTTGTGACAC
448 GTTG-AAAGAAAAGCTTTTCTTGCGACAC
*
118231 CAAAGCATCAATGTCATGTATCCTAATGAAGAGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
*
118296 TGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATTAATTTTGATTTTAAGGAAAAT
66 TGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAAT
* *
118361 AGGGCAAAAAAAAGATTTCCACGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
131 AGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
* * * * * *
118426 GTGTTTATAGTGCCAAATTACAAAATGAATGAAGATCAATACTAGAATGCATGTTTGACTTATTT
196 GTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTT
* * * * *
118491 GAGGCATGAACGTAGACTTTACAAAAATT-GGTGGGAAGAAAGTCTTTTTTGTGAAACCAAAGCA
261 GAGGCACGAACTTAGACTTTACAAAAATTGGGT-GGAAGAAAGCCTTTCTTG-CAAACCAAAGCA
* * * * * * *
118555 TTAACATCATGTATCCTTTTGAGAAGACAAAGTTTATGGTGCCTAATCCTGAAAATAATGGGGAT
324 TCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
*
118620 TAGTATGACTATTCATGGTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAA
389 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAA
118685 AGAAAAGCTTTTCTTGCGACAC
454 AGAAAAGCTTTTCTTGCGACAC
* * ** * *
118707 CAAAGCATCAATATCATGTAGCCTAATGAAACGAATGTGTTTTTGGTTCCCAATCATGAAAAGAA
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
* * * * * * *
118772 TGGAGACTGTTAAGATAATCAACGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAAT
66 TGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAAT
* * * * *
118837 AGGGCAAAGGAAACATTTCCATGCAAAACAAAATCATTAATATCATTTACCCTAATGAGGAGAAT
131 AGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
* * * * * *
118902 GTGTTTATCGTGCCTAATCAGAAAATGAATGAAAATCATTACTAGAATCCAAGTTCGACTCACTT
196 GTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTT
* * * ** * *
118967 AAGGCACAAACTTAGACTTTAAAAAAAATTGGCAGGAAGGAAGCCTTTTTTGCAAAACCAAAGCA
261 GAGGCACGAACTTAGACTTT-ACAAAAATTGGGTGGAAGAAAGCCTTTCTTGC-AAACCAAAGCA
* * **
119032 TCAATATCATGC-ATCCTTATGAGAAGACTAAGTTTATGGTGCCTAATTCTGAAAA-AATGGCTA
324 TCAATATCAT-CTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGA
* * * * * *
119095 TTAGTGTGACTGTTCGTGTTTGTCTTATTTACGAG--AAACTTTGATTCTATCAAAAACAGTTTA
388 TTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGA
* *
119158 AAGAAAAGCTTTTCTTGTGATAC
453 AAGAAAAGCTTTTCTTGCGACAC
* *
119181 CAAAGCTTCAATGTCATGTATCCT-ATAGAAGGGAATGTATTCTTGGTTCCCAATCTTGAAAAGA
1 CAAAGCATCAATGTCATGTATCCTAAT-GAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGA
* * *
119245 ATGGAGACTGTTATGAGAATCGATGCTTGTCATATTTAAAGGATGAATTTTGATTTTTAGGAAAA
65 ATGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAA
* * *
119310 TAGGGCAAAGAAAATATTTCCATGCAGAAGAAAATCATCAATATCATTTATCCAAATG-GGAAGA
130 TAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGG-AGA
* * * *
119374 ATGTGTTTATTGTGTCTAATCGCAAAAGGAATGAAGATCATTACTAGAATCCATGTTTGTCTCAT
194 ATGTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCAT
* * * *
119439 TTGAGACACGAACTTAGACTTCACAAAAATT-GGTAGAAAGGAAGCCTTTCTTGCAAAACCAAAG
259 TTGAGGCACGAACTTAGACTTTACAAAAATTGGGT-GGAAGAAAGCCTTTCTTGC-AAACCAAAG
* * * * *
119503 CATTAATATCATATACCCTTATGCGAAGACTATGTTTATGGTACCTAATCCTGAAAAGAATGGGG
322 CATCAATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
* * * * * * *
119568 ATTAGTATGACTATTCAAGTTTGACTTATTAAAGAGGCAAACTTTGATTCCAACAAAAACGGTAG
387 ATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTG
* *
119633 AAAGATAAGCTTTTTTTGCGACAC
452 AAAGAAAAGCTTTTCTTGCGACAC
* * * *
119657 TAAAGCATCAATGTCATATATCCTAATGAAGAGAATGTGTTTTTGGTTCCC
1 CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCC
119708 TGAACTTTGA
Statistics
Matches: 6304, Mismatches: 776, Indels: 207
0.87 0.11 0.03
Matches are distributed among these distances:
469 318 0.05
470 78 0.01
471 7 0.00
472 2 0.00
473 90 0.01
474 738 0.12
475 1143 0.18
476 2583 0.41
477 778 0.12
478 279 0.04
479 196 0.03
480 39 0.01
481 53 0.01
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.31
Consensus pattern (475 bp):
CAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCTTGAAAAGAA
TGGAGACTGTTACGAGAATCGATGCTTGTCATATTTAAGGGATGAATTTTGATTTTAAGGAAAAT
AGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAT
GTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGACTCATTT
GAGGCACGAACTTAGACTTTACAAAAATTGGGTGGAAGAAAGCCTTTCTTGCAAACCAAAGCATC
AATATCATCTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTA
GTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAG
AAAAGCTTTTCTTGCGACAC
Found at i:117659 original size:158 final size:161
Alignment explanation
Indices: 115541--118137 Score: 380
Period size: 159 Copynumber: 16.4 Consensus size: 161
115531 GAAAATCACT
* * * * * * *
115541 AATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGTCTAATCAC--AAAAGGAATGAAGAT
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATC-CTGAAAAGGAATGAAGAT
* * * *
115604 CATTACTAGAATCCATGTTGGACTCATTTGAAGCATA-AACATAGACATTACAAAAATTGGAGGG
65 CATTACTAGAATCCATGTTGGACTCATTTGAGGCATAGAACTTAGACTTTACAAAAATTGGAGAG
* *
115668 AAA-AAAGCCTTTCTTGCTGAA-CCAAAGCATC
130 AAAGAAAGCCTTTCATGC-AAATCCAAAGCATC
* * * ** *
115699 AATATCGTCTATCCTAATGAGAAGACTATATTTATAGTGCCTAATCCTGAAAA-AAATGGGGATT
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATCCTGAAAAGGAATGAAGATC
* * * * * * * * *
115763 AGTA-T-GACTATACATGTTTGTCTTATTT-AAG-ATACAAACTTTGA-TTCTATCAAAAA-CGG
66 ATTACTAGA--ATCCATGTTGGACTCATTTGAGGCATA-GAACTTAGACTT-TA-CAAAAATTGG
* * * * *
115822 TG-GAAAGAATAGCTTTTCTTGC-TATCCCAAAGCACC
126 AGAGAAAGAA-AGCCTTTCATGCAAAT-CCAAAGCATC
* * * * * * *
115858 AATGTCACG-C-ATCCTAAT-A-AACGGAATATGTTTTTGGTTCCCAATCTTGAAAA-GAATGGA
1 AATAT--CGTCTATCCTAATGAGAA--GAATATATTTATGGTGCCTAATCCTGAAAAGGAATGAA
* * * * * * * * *
115918 GA-CTGTTACGAGAATCAATGCTT-GCCTTATTTAAGGGAT-GAACTTTGATTTTA-ATGAAAAT
62 GATC-ATTACTAGAATCCATG-TTGGACTCATTTGAGGCATAGAACTTAGACTTTACA--AAAAT
* * * *** *
115979 AGG-G-CAAAGAAAAG-ATTTCCATGCAAAAGAAAATCATC
123 TGGAGAGAAAG-AAAGCCTTT-CATGCAAATCCAAAGCATC
* * * * * * * * * *
116017 AATATCATTTATCCTAATGAGGAGAATGTGTTTATTGTGTCTAATCAC--AACATGAAAGAAGAT
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATC-CTGAAAAGGAATGAAGAT
*
116080 CATTACTAGAATCCATGTTGGACTCATTTGAGGCA-CGAACTTAGACTTTAC-AAAATTGGAG-G
65 CATTACTAGAATCCATGTTGGACTCATTTGAGGCATAGAACTTAGACTTTACAAAAATTGGAGAG
* * *
116142 GAAGAAAGCCTTTCTTGCGAAA-CAAAAGCATC
130 AAAGAAAGCCTTTCATGC-AAATCCAAAGCATC
* * ** *
116174 AATATCATCTATCCTAATGAGAAGACTATATTTATGGTGCCTAATCCTGAAAA-GAATGGGGATT
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATCCTGAAAAGGAATGAAGATC
* ** * * * * *
116238 AGTA-T-GACTATTTATGTTTGTCTTATTTAAGAGAGC--A-AACTTTGA-TTCTATCAAAAA-C
66 ATTACTAGA--ATCCATGTTGGACTCATTT--GAG-GCATAGAACTTAGACTT-TA-CAAAAATT
* * * *
116296 GGTG-GAAAGAAAAGCTTTTCTTGCGACA-CCAAAGCATC
124 GGAGAGAAAG-AAAGCCTTTCATGC-AAATCCAAAGCATC
* * * * * * * * *
116334 GATGTCATGTATCCTAATGA-AGAGAATGTATTCT-TGTTTCCTAATCTTGAAAA-GAATGGAGA
1 AATATCGTCTATCCTAATGAGA-AGAATATATT-TATGGTGCCTAATCCTGAAAAGGAATGAAGA
* * ** * ** * * * * ** *
116396 -CTGTTACGAGAATTGGA-GCTT-GTCAAATTTAAAGG-AT-GAATTTTGATTTTAGGGAAAATA
64 TC-ATTACTAGAA-TCCATG-TTGGACTCATTT-GAGGCATAGAACTTAGACTTTA-CAAAAATT
* * *** *
116456 GG-G-TAAAGAAAAG-ATTTCCATGCAAAAGAAAATCATC
124 GGAGAGAAAG-AAAGCCTTT-CATGCAAATCCAAAGCATC
* * * * * * * * * *
116493 AATATCATTTATCCTAATAAGGAGAATGTGTTTGTTGTGTCTAATCAC--AAAAAGAATGAAGAT
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATC-CTGAAAAGGAATGAAGAT
* * * *
116556 CATTACTAGAATCCATGTTTGACTCATTTGAGGCA-CGAACTTAGACTTTTCAAAAATTGTAG-G
65 CATTACTAGAATCCATGTTGGACTCATTTGAGGCATAGAACTTAGACTTTACAAAAATTGGAGAG
* * *
116619 GAAGAAAGCCTTTCTTGTGAAA-CCAAAGCATC
130 AAAGAAAGCCTTTCATG-CAAATCCAAAGCATC
* * * * * * * * * * * *
116651 AATATCATGTACCCTTATGAGAAGACTATGTTTACGATTCCTAATCCTGAAAA-GAATTAGGATT
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATCCTGAAAAGGAATGAAGATC
* ** ** * * * * * * * *
116715 AGTA-TCACTATTAATGTTTGTCTTATTTAAAAG-ACA-AACTTTGA-TTCTAACAAAAA-CGG-
66 ATTACT-AGAATCCATGTTGGACTCATTT-GAGGCATAGAACTTAGACTT-T-ACAAAAATTGGA
* * ** *
116774 TAGAAAGAAAAGCTTTTTTTGCTACA-CCAAA-CATC
127 GAGAAAG-AAAGCCTTTCATGC-AAATCCAAAGCATC
* * * * * * * * * *
116809 AATGTCATGTATCCTAATGA-AGGGAA-AGTGTTTTTGGTTCCCAATCTTG-AAAGGAATGGAGA
1 AATATCGTCTATCCTAATGAGA-AGAATA-TATTTATGGTGCCTAATCCTGAAAAGGAATGAAGA
* * ** * * * * * *
116871 -CTGTTACGAGAATTGATCCTT-GTCAT-ATTTAAAGG-AT-GAATTTTGATTTTA-AGGAAAAT
64 TC-ATTACTAGAATCCAT-GTTGGAC-TCATTT-GAGGCATAGAACTTAGACTTTACA--AAAAT
* * ** *** *
116930 AGG-G-CAAAGAAAAGATTTTCATGCAAAAGAAAATCATC
123 TGGAGAGAAAG-AAAGCCTTTCATGCAAATCCAAAGCATC
* * * * * * * *
116968 AATATCATTTATCCTAATAAGGAGAATGTGTTTATTGTGTCTAAT-C-GCAAAAGGAATGAAGAT
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATCCTG-AAAAGGAATGAAGAT
* * * * * *
117031 CATTACTAGAATCCATGTTTGTCTAATTTGAGGCA-GGAACTGAGACTTCACAAAAATTGGTAG-
65 CATTACTAGAATCCATGTTGGACTCATTTGAGGCATAGAACTTAGACTTTACAAAAATTGG-AGA
* * *
117094 G-AAGAAAGCCTTTCTTGCGAAA-CCGAAGCGTC
129 GAAAGAAAGCCTTTCATGC-AAATCCAAAGCATC
* * * * * * * *
117126 AATATCATGTATCCTTATGTGAAGACTATGTTTATGGTGCCTAATCCT-AAAAAGAATG--G-GC
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATCCTGAAAAGGAATGAAGATC
** * ** * *
117187 ATTAGGATGACTATTCATGTTTGG-CAT-ATTAAAGAG-ACA-AACTTTGA-TTCTACCAAAAA-
66 ATTACTA-GA--ATCCATG-TTGGAC-TCATTTGAG-GCATAGAACTTAGACTT-TA-CAAAAAT
* ** * * * *
117246 CGG-TTGAAAGAAACGCTTTTCTTGTGACA-CCAAAGCATC
123 TGGAGAGAAAGAAA-GCCTTTCATG-CAAATCCAAAGCATC
* * * * *** * * * **
117285 AATGTCATATATCCTAATGA-AGGGAATGCGTTTTTGGTTCCCAAT-CT-AGAAAGGAATGTTGA
1 AATATCGTCTATCCTAATGAGA-AGAATATATTTATGGTGCCTAATCCTGA-AAAGGAATGAAGA
* * * * * * * *
117347 -CTGTTACGAGAATCGATGCTT-GTCAT-ATTTAAGG-GTTGAATCTT-GATTTTA-AGGAAAAT
64 TC-ATTACTAGAATCCATG-TTGGAC-TCATTTGAGGCATAGAA-CTTAGACTTTACA--AAAAT
* * * *** * *
117406 AGG-GCA-AAAAAAAG-ATTTCCATGCAAAAGAAAATCACC
123 TGGAG-AGAAAGAAAGCCTTT-CATGCAAATCCAAAGCATC
* * * * * * * *
117444 AATATCATTTATCCTAATGAGGATAATGTGTTTATTGTGTCTAATCAC--AAAAGGAATGAAGAT
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATC-CTGAAAAGGAATGAAGAT
117507 CATTACTAGAATCCATGTTGGACTCATTTGAGGCAT-GAACTTAGACTTTACAAAAATTGGAGAG
65 CATTACTAGAATCCATGTTGGACTCATTTGAGGCATAGAACTTAGACTTTACAAAAATTGGAGAG
*
117571 -AAGAATGCCTTTCATGCAAATCCAAAGCATC
130 AAAGAAAGCCTTTCATGCAAATCCAAAGCATC
* ** *
117602 AATATCGTCTATCCTAATGAGAAGACTATATTTATGGTGCCTAATCCTGAAAA-GAATGGGGATT
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATCCTGAAAAGGAATGAAGATC
* * * * * * * * * * *
117666 AGTA-T-GACTATTCAGGTTTGTCTTAATTAAGAG-ACA-AACTTTGA-TTCTATCAAAAA-CGG
66 ATTACTAGA--ATCCATGTTGGACTCATTTGAG-GCATAGAACTTAGACTT-TA-CAAAAATTGG
* * * *
117725 TG-GAAAGAATAGCTTTTCTTGC-GATCCCAAAGCATC
126 AGAGAAAGAA-AGCCTTTCATGCAAAT-CCAAAGCATC
* * * * * * * * * *
117761 AATGTC-ACACATCCTAATGA-AGGGAATATGTTTTTGGTTCCCAAT-CTTAAAAGGAATGGAGA
1 AATATCGTC-TATCCTAATGAGA-AGAATATATTTATGGTGCCTAATCCTGAAAAGGAATGAAGA
* * * * * * * * *
117823 -CTGTTACGAGAATCAATGCTT-GTCTTATTTAAAG-ATAGAACATT-GATTTTA-AGGAAAATA
64 TC-ATTACTAGAATCCATG-TTGGACTCATTTGAGGCATAGAAC-TTAGACTTTACA--AAAATT
* * *** * *
117883 GG-G-CAAAGAAAAG-ATTTCAATGCAAAAGAAAATCATA
124 GGAGAGAAAG-AAAGCCTTTC-ATGCAAATCCAAAGCATC
* * * * *
117920 AATATCAT-TATCCTAATGAGGAGAATGTGTTTATTGTGCCT-ATCAC--AAAAGGAATGAAGAT
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATC-CTGAAAAGGAATGAAGAT
* *
117981 CATTACTAGAATCCATGTTGGACTCATTTGAGGC-TCGAACTTAAACAAACTTTACAAAAATTGG
65 CATTACTAGAATCCATGTTGGACTCATTTGAGGCATAGAACTT----AGACTTTACAAAAATTGG
* *
118045 A-AGAAAGAAAGCCTTTCTTGTGAAA-CCAAAGCATC
126 AGAGAAAGAAAGCCTTTCATG-CAAATCCAAAGCATC
* **
118080 AATATCGTCTATCCTAATGAGAAGACTATATTTATGGTGCCTAATTATGAAAA-GAATG
1 AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATCCTGAAAAGGAATG
118138 GGGATTAGTA
Statistics
Matches: 1766, Mismatches: 466, Indels: 410
0.67 0.18 0.16
Matches are distributed among these distances:
155 8 0.00
156 17 0.01
157 168 0.10
158 584 0.33
159 740 0.42
160 167 0.09
161 63 0.04
162 15 0.01
163 4 0.00
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.30
Consensus pattern (161 bp):
AATATCGTCTATCCTAATGAGAAGAATATATTTATGGTGCCTAATCCTGAAAAGGAATGAAGATC
ATTACTAGAATCCATGTTGGACTCATTTGAGGCATAGAACTTAGACTTTACAAAAATTGGAGAGA
AAGAAAGCCTTTCATGCAAATCCAAAGCATC
Found at i:120074 original size:420 final size:419
Alignment explanation
Indices: 119288--120127 Score: 1195
Period size: 420 Copynumber: 2.0 Consensus size: 419
119278 ATTTAAAGGA
* * * *
119288 TGAATTTTGATTTTTAGGAAAATAGGGCAAAGAAAATATTTCCATGCAGAAGAAAATCATCAATA
1 TGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCAAGCAGAAGAAAATCATCAATA
* * * *
119353 TCATTTATCCAAATGGGAAGAATGTGTTTATTGTGTCTAATCGCAAAAGGAATGAAGATCATTAC
66 TCATTTACCCAAATGGGAAGAATGTGTTTATAGTGCCTAATCACAAAAGGAATGAAGATCATTAC
* *
119418 TAGAATCCATGTTTGTCTCATTTGAGACACGAACTTAGACTTCACAAAAATTGGTAGAAAGGAAG
131 TAGAATCCATGTTTGTCTCATTTGAGACAAGAACTTAGACTTCACAAAAATTGGTAGAAAGAAAG
* * * *
119483 CCTTTCTTGCAAAACCAAAGCATTAATATCATATACCCTTATGCGAAGACTATGTTTATGGTACC
196 CCTTTCTTACAAAACCAAAGCATCAATATCATATACCCTTAGGAGAAGACTATGTTTATGGTA-C
*
119548 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTAAAGAGGCAAACTTT
260 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTAAAGAGACAAACTTT
* * *
119613 GATTCCAACAAAAACGGTAGAAAGATAAGCTTTTTTTGCGACACTAAAGCATCAATGTCATATAT
325 GATTCCAACAAAAACAGTAGAAAGAAAAGCTTTTCTTGCGACACTAAAGCATCAATGTCATATAT
*
119678 CCTAATGAAGAGAATGTGTTTTTGGTTCCC
390 CCTAATGAAGAGAATATGTTTTTGGTTCCC
* * *
119708 TGAACTTTGATTTTAAGGAAAATATGGCAAATG-GAACATTTCTAAGCA-AAGAAAAATCATCAA
1 TGAACTTTGATTTTAAGGAAAATAGGGCAAA-GAAAACATTTCCAAGCAGAAG-AAAATCATCAA
* * *
119771 TATCCTTTACCCTAATGTGG-AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCAT
64 TATCATTTACCCAAATG-GGAAGAATGTGTTTATAGTGCCTAATCACAAAAGGAATGAAGATCAT
* * * * * *
119835 TACTAGAATTCATGTTTGTCTTATTTGAGGCAAGAACTTAGACATT-ATAAAAATTGGTGGGAAG
128 TACTAGAATCCATGTTTGTCTCATTTGAGACAAGAACTTAGAC-TTCACAAAAATTGGTAGAAAG
* * *
119899 AAAGCCTTTCTTACGAAACCAAAGCATCAATATCATGTATCCTTAGGAGAAGACTATGTTTATGG
192 AAAGCCTTTCTTACAAAACCAAAGCATCAATATCATATACCCTTAGGAGAAGACTATGTTTATGG
* * * *
119964 TGA-TGACTCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTAAAGAGATAA
257 T-ACT-AATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTAAAGAGACAA
* * *
120028 ACTTTGATTCTATCAAAAACAGTTGAAAGAAAAGCTTTTCTTGCGACACTAAAGCATCAATGTCA
320 ACTTTGATTCCAACAAAAACAGTAGAAAGAAAAGCTTTTCTTGCGACACTAAAGCATCAATGTCA
* *
120093 TGTATCCTAATGAAGGGAATATGTTTTTGGTTCCC
385 TATATCCTAATGAAGAGAATATGTTTTTGGTTCCC
120128 AACCATGAAA
Statistics
Matches: 371, Mismatches: 43, Indels: 12
0.87 0.10 0.03
Matches are distributed among these distances:
419 4 0.01
420 361 0.97
421 6 0.02
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.31
Consensus pattern (419 bp):
TGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAACATTTCCAAGCAGAAGAAAATCATCAATA
TCATTTACCCAAATGGGAAGAATGTGTTTATAGTGCCTAATCACAAAAGGAATGAAGATCATTAC
TAGAATCCATGTTTGTCTCATTTGAGACAAGAACTTAGACTTCACAAAAATTGGTAGAAAGAAAG
CCTTTCTTACAAAACCAAAGCATCAATATCATATACCCTTAGGAGAAGACTATGTTTATGGTACT
AATCCTGAAAAGAATGGGGATTAGTATGACTATTCAAGTTTGACTTATTAAAGAGACAAACTTTG
ATTCCAACAAAAACAGTAGAAAGAAAAGCTTTTCTTGCGACACTAAAGCATCAATGTCATATATC
CTAATGAAGAGAATATGTTTTTGGTTCCC
Found at i:120711 original size:475 final size:474
Alignment explanation
Indices: 119708--122614 Score: 4057
Period size: 475 Copynumber: 6.1 Consensus size: 474
119698 TTTGGTTCCC
* * *
119708 TGAACTTTGATTTTAAGGAAAATATGGCAAATGG-AACATTTCTAAGC-AAAGAAAAATCATCAA
1 TGAACTTTGATTTTAAGGAAAATAGGGCAAA-GGAAACATTTCCATGCAAAAG-AAAATCATCAA
* *
119771 TATCCTTTACCCTAATGTGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATT
64 TATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATT
* *
119836 ACTAGAATTCATGTTTGTCTTATTTGAGGCAAGAACTTAGACATTATAAAAATTGGTGGGAAGAA
129 ACTAGAATTCATGTTTGTCTCATTTGAGG-ACGAACTTAGACATTATAAAAATTGGTGGGAAGAA
* *
119901 AGCCTTTCTTACGAAACCAAAGCATCAATATCATGTATCCTTAGGAGAAGACTATGTTTATGGTG
193 AGCCTTTCTTACGAAACCAAAG-ATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTG
* * ** *
119966 -ATGACTCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTAAAGAGATAAAC
257 CCT-AATCCTGAAAAGAATGGGGATTAGTATGACTATTCACATTTGTCTTATTAAAGAGACAAAC
*
120030 TTTGATTCTATCAAAAACAGTTGAAAGAAAAGCTTTTCTTGCGAC-ACTAAAGCATCAATGTCAT
321 TTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACAAC-AAAGCATCAATGTCAT
* * *
120094 GTATCCTAATGAAGGGAATATGTTTTTGGTTCCCAACCATGAAAAGAATGGTGACTGTTACGAGA
385 GTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGA
*
120159 ATCAACGCTTGCCTTATTTAAGGGG
450 ATCAACGCTTGCCTTATTTAAGGGA
* * * *
120184 TGAA-TAATGATTTTATGGAAAATAAGGCAAAGGAAACATTTCCATACAAAAGAAAATCATCAAT
1 TGAACT-TTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAAT
** * *
120248 ATCATTTACCCTAATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAATGAAGAACTTTA
65 ATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTA
120313 CTAGAATTCATGTTTGTCTCATTTGA-GATGCGAACTTAGACATTATAAAAATTGGTGGGAAGAA
130 CTAGAATTCATGTTTGTCTCATTTGAGGA--CGAACTTAGACATTATAAAAATTGGTGGGAAGAA
* * *
120377 AGCCTTTCTTGCGAAACCAATTG-TCAATATCGTGCATCCTTATGAGAAGACTATGTTTATGGTG
193 AGCCTTTCTTACGAAACCAA-AGATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTG
* *
120441 CCTAATCCTGAAAAGAATGGGGATTAGTTATGACTATTCACATTTGTCTTATTAAGGAGGCAAAC
257 CCTAATCCTGAAAAGAATGGGGATTAG-TATGACTATTCACATTTGTCTTATTAAAGAGACAAAC
* * *
120506 TTTGATTATATCAAAAATGGTTGAGAGAAAAGC-TTTCTTGCGACAACAAAGCATCAATGTCATG
321 TTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACAACAAAGCATCAATGTCATG
** * *
120570 TATCCTTTTGAAGGGAATGTGCTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACAAGAA
386 TATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAA
* *
120635 TCAATGCTTGCCTTATTTAGGGGA
451 TCAACGCTTGCCTTATTTAAGGGA
* * * *
120659 TGAACTATGATTTTATGGAAAATAAGGCAAAGGAAACATTTTCATGCAAAAGAAAATCATCAATA
1 TGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA
*
120724 TCATTTACCCTAATGAGGAAAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
66 TCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
* * * * *
120789 TATAATTCATGTTTGTCTCATTTAAGGCACGAAATTAGACACTATAAAAATTGGTGTGAAGAAAG
131 TAGAATTCATGTTTGTCTCATTTGAGG-ACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAG
* *
120854 CCTTTCTTCCGAAACCAAAGCATCAATATCGTGCATCCTTATGAGAAGACTATGTTTATGGTGCC
195 CCTTTCTTACGAAACCAAAG-ATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* *
120919 TAATCCT-AAAAGGAATAGGGATTAGTAAGACTATTCACATTTGTCTTATTAAAGAGACAAACTT
259 TAATCCTGAAAA-GAATGGGGATTAGTATGACTATTCACATTTGTCTTATTAAAGAGACAAACTT
*
120983 TGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT-TTGCAAC-ACTAAAGCATCAATGTCATGT
323 TGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACAAC-AAAGCATCAATGTCATGT
* * * *
121046 ATCCTAATGAAGGGAATGTATTTTTGGTTCCCAACCATGAAAAGAATGGTGACTATTACGAGAAT
387 ATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAAT
*
121111 CAACGCTTGCCTTATTTAAGGGG
452 CAACGCTTGCCTTATTTAAGGGA
** * *
121134 TGAACAATGAATTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA
1 TGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA
* *
121199 TCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAGAATGAATGAAGATCATTGC
66 TCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
** * * * ***
121264 TTCAATTCATGTTTGTCTCATTTGAGGCATGAAATTAGCCATTATAAAAATTGGTACAAAGAAAG
131 TAGAATTCATGTTTGTCTCATTTGAGG-ACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAG
* * *
121329 CCTTTCTT-CTGAAACCAAAGCATCAACATCGTGTATCCTTATGAGAAGACTATGTGTATGGTAC
195 CCTTTCTTAC-GAAACCAAAG-ATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGC
* * *
121393 CTAATCCTAAAAAGAATAGGGATTAGTAAGACTATTCACATTTGTCTTATTAAAGAGACAAACTT
258 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACATTTGTCTTATTAAAGAGACAAACTT
* ** ** *
121458 TGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGTGTCAATGAGAAGTA
323 TGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACAACAAAGCATCAATGTCATGTA
* * * * * *
121523 TCCTAGTGAAGGGAATGCGTTTTTTGTTCCCAATCTTGGAAAGAATGGAGACTAG-TATGAGAAT
388 TCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACT-GTTACGAGAAT
121587 CAACGCTTGCCTTATTTAAGGGA
452 CAACGCTTGCCTTATTTAAGGGA
* * * * * *
121610 TAAACTTTAATATTAAGAAAAATAGGGCAAAGGAAACATTTCCACGTAAAA-AAAATCATCAATA
1 TGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA
* * * *
121674 TCGTTTACCCTCATGAGGAGAATGTGTTTGTAGTGCCTAATCACAAAATGAATGAAGATCATTGC
66 TCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
* * * * *
121739 TATAATCCTTGTTTTTCTCATTTGAGGCACAAACTTAGACATTATAAAAATTGGTGGGAAGAAAG
131 TAGAATTCATGTTTGTCTCATTTGAGG-ACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAG
* * * *
121804 CCTTTCTTGCGAACCCAAAGCATCAATATCATGAATCCTTAT--G-AGACTATGTTTATGGTGCC
195 CCTTTCTTACGAAACCAAAG-ATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCC
* ** *
121866 TAATCTTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTT
259 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACATTTGTCTTATTAAAGAGACAAACTTT
*
121931 GATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTAT
324 GATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACAACAAAGCATCAATGTCATGTAT
* * * * *
121996 CCTAATGAAGGGAATGTGGTCTTGGTTTCCAATCATGAAAAGAATGGAGATTGTTATGAGAATCA
389 CCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCA
122061 ACGCTTGCCTTATTTAAGGGA
454 ACGCTTGCCTTATTTAAGGGA
* * * *
122082 TGAACTTTGATTTTAAGGAAAATATGGCAAATGAAACATTTCTACGCAAAAGAAAATCATCAATA
1 TGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA
* * * * *
122147 TCCTTTACCCTAAAGAGGATAATTTGTTTATAGTTCCTAATCACAAAATGAATGAAGATCATTAC
66 TCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
* * * *
122212 TAGAATCCGTGTTTGTCTCATTTGAGGTACGAACTTAGATATTATAAAAATTGGTGGGAAGAAAA
131 TAGAATTCATGTTTGTCTCATTTGAGG-ACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAG
* * * *
122277 CCTTTCATACGAAACCAAAGCGTCAACATCGTGTATCCTTATGAGAAGAGCTATGTTTATGGTGT
195 CCTTTCTTACGAAACCAAAG-ATCAATATCGTGTATCCTTATGAGAAGA-CTATGTTTATGGTGC
* * * ** *
122342 CGAATCCTAAAAAGAATGGGGATTAGTATGGCTATTCATGTTTGTCTTATTTAAGAGACAAACTT
258 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACATTTGTCTTATTAAAGAGACAAACTT
* * * * * * * *
122407 TGATTCTATAAAAAACGGTTAAAAGAAATGCTATTCTTGTGACACCAAAGCGTCAATGTCAAGTA
323 TGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACAACAAAGCATCAATGTCATGTA
* *
122472 TCCTAATGAAGGGAATGCGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGGTACGAGAATC
388 TCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATC
* *
122537 AATGCTTGCCTTATTTAAGTGA
453 AACGCTTGCCTTATTTAAGGGA
*
122559 TGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAAAAAA
1 TGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAA
122615 AGTGTTTATA
Statistics
Matches: 2182, Mismatches: 220, Indels: 57
0.89 0.09 0.02
Matches are distributed among these distances:
471 1 0.00
472 253 0.12
473 164 0.08
474 5 0.00
475 1031 0.47
476 459 0.21
477 269 0.12
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (474 bp):
TGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA
TCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
TAGAATTCATGTTTGTCTCATTTGAGGACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGC
CTTTCTTACGAAACCAAAGATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTA
ATCCTGAAAAGAATGGGGATTAGTATGACTATTCACATTTGTCTTATTAAAGAGACAAACTTTGA
TTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACAACAAAGCATCAATGTCATGTATCC
TAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAAC
GCTTGCCTTATTTAAGGGA
Found at i:125000 original size:42 final size:42
Alignment explanation
Indices: 124952--125071 Score: 150
Period size: 42 Copynumber: 2.8 Consensus size: 42
124942 AAGAGAAAGA
* * *
124952 AGAGATAGAAGGGATGATATGAGGAGAGATAAGAAAGATAGT
1 AGAGATAGGAGGGATGATAAGAGGAGAGATAAGAAAGATAAT
* * **
124994 AGAGATAGGAGGGATGATAGGAGGAGAGATAGGGGAGATAAT
1 AGAGATAGGAGGGATGATAAGAGGAGAGATAAGAAAGATAAT
* *
125036 AGAGAGAGGAGGGATGATAAGAGGAGGAGAGAAGAA
1 AGAGATAGGAGGGATGATAAGAGGA-GAGATAAGAA
125072 GATGGCAGAG
Statistics
Matches: 65, Mismatches: 12, Indels: 1
0.83 0.15 0.01
Matches are distributed among these distances:
42 59 0.91
43 6 0.09
ACGTcount: A:0.45, C:0.00, G:0.42, T:0.12
Consensus pattern (42 bp):
AGAGATAGGAGGGATGATAAGAGGAGAGATAAGAAAGATAAT
Found at i:125014 original size:12 final size:12
Alignment explanation
Indices: 124994--125031 Score: 53
Period size: 12 Copynumber: 3.2 Consensus size: 12
124984 GAAAGATAGT
124994 AGAGATAGGAGG
1 AGAGATAGGAGG
125006 -GATGATAGGAGG
1 AGA-GATAGGAGG
125018 AGAGATAGG-GG
1 AGAGATAGGAGG
125029 AGA
1 AGA
125032 TAATAGAGAG
Statistics
Matches: 24, Mismatches: 0, Indels: 5
0.83 0.00 0.17
Matches are distributed among these distances:
11 7 0.29
12 15 0.62
13 2 0.08
ACGTcount: A:0.39, C:0.00, G:0.50, T:0.11
Consensus pattern (12 bp):
AGAGATAGGAGG
Found at i:125022 original size:24 final size:23
Alignment explanation
Indices: 124952--125061 Score: 69
Period size: 24 Copynumber: 5.1 Consensus size: 23
124942 AAGAGAAAGA
*
124952 AGAGATAGAAGGGATGATATGAGG
1 AGAGATAGGAGGGATGATA-GAGG
* * *
124976 AGAGATA--A-GAAAGAT--AGT
1 AGAGATAGGAGGGATGATAGAGG
124994 AGAGATAGGAGGGATGATAGGAGG
1 AGAGATAGGAGGGATGATA-GAGG
*
125018 AGAGATA-G-GGGA-GATA-A-T
1 AGAGATAGGAGGGATGATAGAGG
*
125036 AGAGAGAGGAGGGATGATAAGAGG
1 AGAGATAGGAGGGATGAT-AGAGG
125060 AG
1 AG
125062 GAGAGAAGAA
Statistics
Matches: 65, Mismatches: 9, Indels: 24
0.66 0.09 0.24
Matches are distributed among these distances:
18 15 0.23
19 2 0.03
20 5 0.08
21 17 0.26
22 6 0.09
23 2 0.03
24 18 0.28
ACGTcount: A:0.44, C:0.00, G:0.43, T:0.14
Consensus pattern (23 bp):
AGAGATAGGAGGGATGATAGAGG
Found at i:130747 original size:159 final size:158
Alignment explanation
Indices: 128718--132585 Score: 992
Period size: 159 Copynumber: 24.5 Consensus size: 158
128708 CTCTACCATG
*
128718 TCACATTTGTCTTA-TTAAGGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTT
1 TCACGTTTGTCTTATTTAAGG-GACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * *** *
128782 TCTTACGACACCAAAGCATCAATGTCATATATCCTTGGGAAGGGAATGTGCTTT-TGGTTCCCAA
65 TCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTG-TTTATGGTGCCCAA
* * * ** * *
128846 TCATGAAAAAAAT--AGACTCTTATGAGAA
129 CCATGAAAAGAATGGAGATTAGTATGATAT
* * * * ** * * * ***
128874 TCAATGCTTGCCTTATTTAGGGGATGAACTATGATTTTATGGAAAATA-GGGCAAAAG-AAA-CA
1 TC-ACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTAT-CAAAA-ACGGTTGAAAGAAAAGC-
* * * ** * * * *
128936 TTTCCATGCAAAAGAAAATCATCAATATCATTTA-CCTTCATG-AGGAGAATGTGTTTATAGTGC
62 TTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC-TAATGAAGG-GAATGTGTTTATGGTGC
* * * *
128999 CCAATCA-CAAAATAATGAAGATGATTACTA-GA-AT
125 CCAACCATGAAAAGAATG--GA-GATTAGTATGATAT
* ** * * * * * * * * *
129033 CCTTGTTTGTCTCATTTGAGGCACAAACTTAGACAT-TATAAAAAATGG-TGAAA-ATAAGCCTT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGA-TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
** * * *** *
129095 TCTTGCGAAACCAAAGTGTCAGTATCATGTATCTCT-ATG-AGAAGACCATGTTTATGGTGCCTA
65 TCTTGCGAAACCAAAGCATCAATATCATGTATC-CTAATGAAG-GGAATGTGTTTATGGTGCCCA
*
129158 ATCC-TGAAAAGAATGGGGATTAGTATGACTAT
128 A-CCATGAAAAGAATGGAGATTAGTATGA-TAT
* * * * * *
129190 TCACATTTGTCTTATTAAAGAGACAAACATTGATTCTATCAGAAACGGTTGAAAAAAAAGCTTTT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT
* * * * * *
129255 CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGAGAATGTGTTTTTGGTTCCCAATC
66 CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCCAACC
* * * * *
129320 ATGTAAAGAATGGAGACT-GTTACGAGAA
131 ATGAAAAGAATGGAGATTAG-TATGATAT
* * * ** ** * ** ** *
129348 TCAATGCTT-TCAATATTTAAGGGATGAACAATGATTTTATGGAAAATAG-TGCAAAGGAAA-CA
1 TC-ACGTTTGTC-TTATTTAAGGGACAAACTTTGATTCTATCAAAAACGGTTG-AAAGAAAAGC-
* * * ** * * * *
129410 TTTCCATGCAAAAGAAAATCATCAATA-CTATTTACCCTAATG-AGGAGAATGTGTTTATAGTGC
62 TTTTCTTGCGAAACCAAAGCATCAATATC-ATGTATCCTAATGAAGG-GAATGTGTTTATGGTGC
* * * * * *
129473 CTAATCA-AAAAATGAATGAACATCT-TTACTAGA-AT
125 CCAACCATGAAAA-GAATGGAGAT-TAGTA-T-GATAT
* * * * * * * * * * * * * *
129508 CCATGCTTGACTCATTTGAGGCACGAACTTAGACTT-T-GCAAAAATTGGTGGGAAG-AAAGCCT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTT
* * * * * *
129570 TTCTTGCGAAACCAAAGCGTCAATATCATGAATCCTTATG-A--GACTATGTTTATGGTGCCTAA
64 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCCAA
*
129632 TCC-TGAAAAGAATGGGGATTAGTATGACTAT
129 -CCATGAAAAGAATGGAGATTAGTATGA-TAT
* * * * *
129663 TCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCCATCAAAAACAGTTGAATGAAAAGCTTTT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT
* *** * * * * * * *
129728 CTTGCGAGACCAAAATGTCAATGTCAAGTATCCTAACGAAGGGAATGCGTTTTTGGTTCCCAATC
66 CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCCAACC
* * * * * * * *
129793 AAGAAAAGAATAGAGACTGGCACGAGAA
131 ATGAAAAGAATGGAGATTAGTATGATAT
* ** * ** * * *
129821 TCAAC-TCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAATATACGG--AAAAGGAAA-C
1 TC-ACGT-TTGTCTTATTTAAGGGACAAACTTTGATTCT-ATCAA-AAACGGTTGAAAGAAAAGC
* * ** * * * *
129882 ATTTCCATGC-AAAAAAAATCATCAACATCATTTATCCTCAA-G-AGGAGAATGTGTTTATAGTG
62 -TTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCT-AATGAAGG-GAATGTGTTTATGGTG
* * * * *
129944 CCTAAACA-CAAAATGAATGAAGATCT-TTACTAGA-AT
124 CCCAACCATGAAAA-GAATGGAGAT-TAGTA-T-GATAT
* * * * * ** * * * * * *
129980 CCATGTTTGTCTCATTTGAGGCATGAACTTAGACAT-TAT-AAAAATTGG-GGGAAG-AAAGCCT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTT
* ** * * * * * * *
130041 TTCTTGTGAAACCAAAGTGTCAATATCGTATATCCTTATG-AGAAGACTATGTTTATGGTGCCTA
64 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCCA
* *
130105 ATCC-TGAAAAGAATGGGGATTAGTAAGACTAT
128 A-CCATGAAAAGAATGGAGATTAGTATGA-TAT
* * * * * * *
130137 TCAC-ATTATCTTATTAAAGAGACAAACTTTTAGTCTATCAAAAATGGTTGAAAGAAAAGCTTTT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT
* * * * * ** *
130201 CTTGCGACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATCTGTTTTTCATCCCCAACC
66 CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCCAACC
* * * *
130266 AAGAAAAGAATGGAGACT-GTTACGATAA
131 ATGAAAAGAATGGAGATTAG-TATGATAT
* * * ** ** * * * * *
130294 TCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGGAAAATAAGG--CAAAGGAAA-CA
1 TC-ACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTAT-CAAAA-ACGGTTGAAAGAAAAGC-
* * * * ** * * * *** *
130356 TATCCATGCAAAAGAAAATCATCAATATCATTTACCCTAATG-AGGAGAATACATTTATAGTGCC
62 TTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGCC
* * * * *
130420 TAATCA-CAAAATGAATGAAGATCT-TTACTAGA-AT
126 CAACCATGAAAA-GAATGGAGAT-TAGTA-T-GATAT
* * * * * * * * ** * * *
130454 CCATGTTTGTCTCATTTGAGGCACGAACTTAGACAT-TAT-AAAAATTAGTGGGAAG-AAAGCCT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTT
* * ** * * * * * *
130516 TTCTTGTGAAAGCAAAGTGTCAATGTCATGTATCCTTATG-AGAAGACTATGTTTATGGTGCCTA
64 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCCA
*
130580 ATCC-TGAAAAGAATGGGGATTAGTATGACTAT
128 A-CCATGAAAAGAATGGAGATTAGTATGA-TAT
* * * *
130612 TCATGTTTGTCTTATTAAAGAGATAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT
* * * * *
130677 CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAACC
66 CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCCAACC
* * * * *
130742 ATGAAAAGAATGGAGACTATTACGAGAA
131 ATGAAAAGAATGGAGATTAGTATGATAT
** ** ** ** * * *
130770 TCAACACTTACCTTATTTAAGGGATGAACAATGATTTTATGCAAAAAAGG--GCAAAGGAAA-CA
1 TC-ACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTAT-CAAAAACGGTTG-AAAGAAAAGC-
* * ** * * * * *
130832 TTTCCATGC-AAATGAAAATCATCAATACCATTTACCCTAAT-AAGGAGAATGTGTTTATAGTGC
62 TTTTCTTGCGAAA-CCAAAGCATCAATATCATGTATCCTAATGAAGG-GAATGTGTTTATGGTGC
* * * *
130895 CCAATCA-CAAAATGAATGAAGATCT-TTACTAGA-AT
125 CCAACCATGAAAA-GAATGGAGAT-TAGTA-T-GATAT
* * * * * * * * * *
130930 CCATGTTTGTCTCATTTGAGGCACGAACTTAGACAT-TAT-AAAAATTGG-TGAAA-AGAAAGCC
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGA-AAAGCT
** * * * * **
130991 TTTCTTGCGAAACCAAAGTGTCAGTATCGTGTATCCTTATG--GGAAGACTACGTTTATGGTGCC
63 TTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGG--GAATGTGTTTATGGTGCC
* * *
131054 TAATCATGAAAAGAATAGGA-ATTAGTAAGATTAT
126 CAACCATGAAAAGAAT-GGAGATTAGTATGA-TAT
* *
131088 TCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT
* * * * * *
131153 CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATCTGTTTTTAGTCCCCAACC
66 CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCCAACC
* * * *
131218 AAGAAAAGAATGGATACT-GTTATGATAA
131 ATGAAAAGAATGGAGATTAG-TATGATAT
* * ** ** * * * *
131246 TCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGGAAAATA-GG--GCAACGGAAA-C
1 TC-ACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTAT-CAAAA-ACGGTTG-AAAGAAAAGC
* * ** * * * * * *
131307 ATTTCCATGC-AAATGAAAATCATCAATACCATTTACCCTAATTAGAA--GAATGTGCTTATAGT
62 -TTTTCTTGCGAAA-CCAAAGCATCAATATCATGTATCCTAA-T-GAAGGGAATGTGTTTATGGT
* * * * *
131369 GCCTAATCA-CAAAATGAATGAAGATCT-TTACTAGA-AT
123 GCCCAACCATGAAAA-GAATGGAGAT-TAGTA-T-GATAT
* ** * * * * * * * * * *
131406 CCTTGCTTGTCTCATTTGAGGCAC-AACTTAGACAT-TAT-AAAAATTGGTGGGAAG-AAAGCCT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTT
* * * * * *
131467 TTCTTGTGAAACCAAAGCATCAATATCATGTATCCTTATG-AGAAGACTATGTTTATGGTGCCTA
64 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAG-GGAATGTGTTTATGGTGCCCA
131531 ATCCA-GAAAAGAAT-GAGGATTAGTATGACTAT
128 A-CCATGAAAAGAATGGA-GATTAGTATGA-TAT
*
131563 TCACGTTTGTCTTATTAAAGGGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT
* * ** * *
131628 CTTGCGACACCAAAGCATC-ATCGTCATGTATCCTAATGACCGGAATGTGTTTTTGGTTCCCAAC
66 CTTGCGAAACCAAAGCATCAAT-ATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCCAAC
* * * * *
131692 CATGAAAAGAATGGAGACTATTGTGAGAA
130 CATGAAAAGAATGGAGATTAGTATGATAT
* * ** ** * * * *
131721 TCAATGCTTACCTTATTTAAGGGATGAA-TAATGATTTTATGGAAAATA-GG--GCAAAGGAAA-
1 TC-ACGTTTGTCTTATTTAAGGGACAAACT-TTGATTCTAT-CAAAA-ACGGTTG-AAAGAAAAG
* * * ** * * * * *
131781 CATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAAT-AAGGAGAATGTGTTTATAGTG
61 C-TTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGG-GAATGTGTTTATGGTG
* * * * * *
131845 CCTAATCA-CAAAATGGATGAAGATCT-TTACTAGA-AT
124 CCCAACCATGAAAA-GAATGGAGAT-TAGTA-T-GATAT
* ** * * * * * * *
131881 CCTTGTTTGTCTCATTTGAAGTG-CGAGCTTAGACAT-TAT-AAAAATTGG-TGAAA-AGAAAGC
1 TCACGTTTGTCTTATTT-AAGGGACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGA-AAAGC
* * * * ***
131941 TTTTCTTG-GAAAACCAAAGCGTCAGTATCATGTATCCTTATG--GGAAGACTACATTTATGGTG
62 TTTTCTTGCG-AAACCAAAGCATCAATATCATGTATCCTAATGAAGG--GAATGTGTTTATGGTG
* * * *
132003 CCTAATCATGAAAACAATAGG-GATTAGTAAGATTAT
124 CCCAACCATGAAAAGAAT-GGAGATTAGTATGA-TAT
* * *
132039 TCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGGAAGAAAAGCTTTT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT
* * * * * * * *
132104 CTTG-GACACCAAAGCATCATTGTCATATATCCTAATGACGGGAATGTGTTTTTGGTTCCCATCC
66 CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCCAACC
* * * * *
132168 ATGAAAAGAATGGAGACTATTACGAGAA
131 ATGAAAAGAATGGAGATTAGTATGATAT
* ** ** * ** * *
132196 TCA-GTGCTTGCCTTATTTAAGGGATGAACAATGATTTTAT-GGAAACTAGG--GCAAAGGAAAT
1 TCACGT--TTGTCTTATTTAAGGGACAAACTTTGATTCTATCAAAAAC--GGTTG-AAAGAAAAG
* * * * ** * * * * * * *
132257 ATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATAAAGAGAATGTGTTTATAGTGCC
61 CTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCC
* * * ** *
132322 TAATCA-CAAAATGAATAAAGATCTTCACTA-GA-AT
126 CAACCATGAAAA-GAATGGAGA--TT-AGTATGATAT
* * * * * * * * * * *
132356 CCATGTTTGTCTCATTTGAGGCACGAACTTAGACAT-TAT-AAAAATCGGTGGGAAG-AAAGCCT
1 TCACGTTTGTCTTATTTAAGGGACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTT
* * * ** * *
132418 TTCTTGCGAAACCAAAGCAACAATATCGTGTATCCTTATG-AGAAAATTATGTTTATGGTGCCTA
64 TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAA-TGTGTTTATGGTGCCCA
* * * * *
132482 ATCTTGAAAAGAATGGGGATTAGAAAGACTAT
128 ACCATGAAAAGAATGGAGATTAGTATGA-TAT
* *
132514 TCACGTTTGTCTT-TTTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGATAGAAAAGCTTT
1 TCACGTTTGTCTTATTT-AAGGGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTT
132578 TCTTGCGA
65 TCTTGCGA
132586 CACTGATGAC
Statistics
Matches: 2615, Mismatches: 854, Indels: 483
0.66 0.22 0.12
Matches are distributed among these distances:
153 2 0.00
154 12 0.00
155 72 0.03
156 177 0.07
157 328 0.13
158 806 0.31
159 1101 0.42
160 80 0.03
161 34 0.01
162 3 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.30
Consensus pattern (158 bp):
TCACGTTTGTCTTATTTAAGGGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTT
CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAAGGGAATGTGTTTATGGTGCCCAACC
ATGAAAAGAATGGAGATTAGTATGATAT
Found at i:130756 original size:476 final size:474
Alignment explanation
Indices: 128723--140725 Score: 11014
Period size: 473 Copynumber: 25.2 Consensus size: 474
128713 CCATGTCACA
*
128723 TTTGTCTTA-TTAAGGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTA
1 TTTGTCTTATTTAA-GAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTG
* *** *
128787 CGACACCAAAGCATCAATGTCATATATCCTTGGGAAGGGAATGTGCTTTTGGTTCCCAATCATGA
65 CGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGA
* * * *
128852 AAAAAAT--AGACTCTTATGAGAATCAATGCTTGCCTTATTTAGGGGATGAACTATGATTTTATG
130 AAAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATG
* * * *
128915 GAAAATAGGGCAAAAGAAACATTTCCATGCAAAAGAAAATCATCAATATCATTTACCTTCATGAG
195 GAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* ** *
128980 GAGAATGTGTTTATAGTGCCCAATCACAAAAT-AATGAAGATGATTACTAGAATCCTTGTTTGTC
260 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * *
129044 TCATTTGAGGCACAAACTTAGACATTATAAAAAATGGT--GAAAATAAGCCTTTCTTGCGAAACC
325 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGA-AAGCCTTTCTTGCGAAACC
* * * *
129107 AAAGTGTCAGTATCATGTAT-CTCTATGAGAAGACCATGTTTATGGTGCCTAATCCTGAAAAGAA
389 AAAGCGTCAATATCGTGTATCCT-TATG-G-AGACTATGTTTATGGTGCCTAATCCTGAAAAGAA
**
129171 TGGGGATTAGTATGACTATTCACA
451 TGGGGATTAGTATGACTATTCATG
* * * *
129195 TTTGTCTTATTAAAGAGACAAACATTGATTCTATCAGAAACGGTTGAAAAAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* *
129260 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGAGAATGTGTTTTTGGTTCCCAATCATGTA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * **
129325 AAGAATGGAGACTGTTACGAGAATCAATGCTTTCAATATTTAAGGGATGAACAATGATTTTATGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* *
129390 AAAATAGTGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACTATTTACCCTAATGAGG
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
* * * *
129455 AGAATGTGTTTATAGTGCCTAATCAAAAAATGAATGAACATCTTTACTAGAATCCATGCTTGACT
261 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
* **
129520 CATTTGAGGCACGAACTTAGACTTTGCAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
326 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
* *
129585 AGCGTCAATATCATGAATCCTTAT-GAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
391 AGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
129649 ATTAGTATGACTATTCATG
456 ATTAGTATGACTATTCATG
* * *
129668 TTTGTCTTATTTAAGAGACAAACTTTGATTCCATCAAAAACAGTTGAATGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* *** * * * *
129733 GAGACCAAAATGTCAATGTCAAGTATCCTAACGAAGGGAATGCGTTTTTGGTTCCCAATCAAGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* ** * ** *
129798 AAGAATAGAGACTGGCACGAGAATCAACT-CTTGCCTTATTTAAGGGATGAACTTTGATTTTAAG
131 AAGAATGGAGACTGTTATGAGAATCAA-TGCTTGCCTTATTTAAGGGATGAACAATGATTTTATG
* * * * * *
129862 GAATATACGGAAAAGGAAACATTTCCATGCAAAA-AAAATCATCAACATCATTTATCCTCAA-GA
195 GAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCT-AATGA
*
129925 GGAGAATGTGTTTATAGTGCCTAAACACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGT
259 GGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGT
* *
129990 CTCATTTGAGGCATGAACTTAGACATTATAAAAATTGG-GGGAAGAAAGCCTTTCTTGTGAAACC
324 CTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* *
130054 AAAGTGTCAATATCGTATATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAAT
389 AAAGCGTCAATATCGTGTATCCTTATG-G-AGACTATGTTTATGGTGCCTAATCCTGAAAAGAAT
* *
130119 GGGGATTAGTAAGACTATTCA-C
452 GGGGATTAGTATGACTATTCATG
* * * * * *
130141 ATTATCTTATTAAAGAGACAAACTTTTAGTCTATCAAAAATGGTTGAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* * ** * * *
130206 GACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATCTGTTTTTCATCCCCAACCAAGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* *
130271 AAGAATGGAGACTGTTACGATAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* * *
130336 AAAATAAGGCAAAGGAAACATATCCATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGG
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
***
130401 AGAATACATTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
261 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
* * *
130466 CATTTGAGGCACGAACTTAGACATTATAAAAATTAGTGGGAAGAAAGCCTTTCTTGTGAAAGCAA
326 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
* * *
130531 AGTGTCAATGTCATGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
391 AGCGTCAATATCGTGTATCCTTATG-G-AGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
130596 GGATTAGTATGACTATTCATG
454 GGATTAGTATGACTATTCATG
* *
130617 TTTGTCTTATTAAAGAGATAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* *
130682 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTATTTTTGGTTCCCAACCATGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * ** * *
130747 AAGAATGGAGACTATTACGAGAATCAACACTTACCTTATTTAAGGGATGAACAATGATTTTATGC
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* * *
130812 AAAAAAGGGCAAAGGAAACATTTCCATGCAAATGAAAATCATCAATACCATTTACCCTAATAAGG
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
*
130877 AGAATGTGTTTATAGTGCCCAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
261 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
**
130942 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGAAAAGAAAGCCTTTCTTGCGAAACCAA
326 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
* * * * *
131007 AGTGTCAGTATCGTGTATCCTTATGGGAAGACTACGTTTATGGTGCCTAATCATGAAAAGAATAG
391 AGCGTCAATATCGTGTATCCTTAT-GG-AGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
* * * *
131072 GAATTAGTAAGATTATTCACG
454 GGATTAGTATGACTATTCATG
*
131093 TTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* * * * *
131158 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATCTGTTTTTAGTCCCCAACCAAGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * *
131223 AAGAATGGATACTGTTATGATAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* * * *
131288 AAAATAGGGCAACGGAAACATTTCCATGCAAATGAAAATCATCAATACCATTTACCCTAATTAGA
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
* * *
131353 AGAATGTGCTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCTTGCTTGTCT
261 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
*
131418 CATTTGAGGCAC-AACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGTGAAACCAA
326 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
* * * *
131482 AGCATCAATATCATGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCAGAAAAGAATGA
391 AGCGTCAATATCGTGTATCCTTATG-G-AGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
*
131547 GGATTAGTATGACTATTCACG
454 GGATTAGTATGACTATTCATG
* *
131568 TTTGTCTTATTAAAGGGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
** *
131633 GACACCAAAGCATC-ATCGTCATGTATCCTAATGACCGGAATGTGTTTTTGGTTCCCAACCATGA
66 GACACCAAAGCATCAAT-GTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGA
* * * *
131697 AAAGAATGGAGACTATTGTGAGAATCAATGCTTACCTTATTTAAGGGATGAATAATGATTTTATG
130 AAAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATG
*
131762 GAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATAAG
195 GAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* *
131827 GAGAATGTGTTTATAGTGCCTAATCACAAAATGGATGAAGATCTTTACTAGAATCCTTGTTTGTC
260 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* ** * ** *
131892 TCATTTGAAGTGCGAGCTTAGACATTATAAAAATTGGTGAAAAGAAAGCTTTTCTTG-GAAAACC
325 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCG-AAACC
* * ** * *
131956 AAAGCGTCAGTATCATGTATCCTTATGGGAAGACTACATTTATGGTGCCTAATCATGAAAACAAT
389 AAAGCGTCAATATCGTGTATCCTTAT-GG-AGACTATGTTTATGGTGCCTAATCCTGAAAAGAAT
* * * *
132021 AGGGATTAGTAAGATTATTCACG
452 GGGGATTAGTATGACTATTCATG
* *
132044 TTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGGAAGAAAAGCTTTTCTTG-
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* * *
132108 GACACCAAAGCATCATTGTCATATATCCTAATGACGGGAATGTGTTTTTGGTTCCC-ATCCATGA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAAT-CATGA
* * *
132172 AAAGAATGGAGACTATTACGAGAATCAGTGCTTGCCTTATTTAAGGGATGAACAATGATTTTATG
130 AAAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATG
* * * *
132237 GAAACTAGGGCAAAGGAAATATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATAAA
195 GAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* *
132302 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATAAAGATCTTCACTAGAATCCATGTTTGTC
260 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
*
132367 TCATTTGAGGCACGAACTTAGACATTATAAAAATCGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
325 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
** * * *
132432 AAGCAACAATATCGTGTATCCTTATGAGAAAATTATGTTTATGGTGCCTAATCTTGAAAAGAATG
390 AAGCGTCAATATCGTGTATCCTTATG-G-AGACTATGTTTATGGTGCCTAATCCTGAAAAGAATG
* * *
132497 GGGATTAGAAAGACTATTCACG
453 GGGATTAGTATGACTATTCATG
*
132519 TTTGTCTT-TTTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGATAGAAAAGCTTTTCTTG
1 TTTGTCTTATTT-AAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTG
** * * * * * * * * *** * *
132583 CGACACTGATGACAACCATGAACCAAGTTTGCCTAAAT-AA-TG-ATCT-TGAGATGGATTTCTA
65 CGACACCAAAG-CATCAATG--TCATGTAT-CCT-AATGAAGGGAATGTGT-TTTTGG-TTCCCA
* * * *** ***** *** ***
132644 A-CAAT-AAACAAAAT---TA-T-TAATGCTAGAA-CAAAAATTAAAAGAAGCAGAAAAAAT-AA
123 ATC-ATGAAA-AGAATGGAGACTGTTATG--AGAATCAATGCTT-GCCTTA-TTTAAGGGATGAA
* ** * *** *
132700 CAAAATGGAATAGATTA-GAGATGAAGGAT-GGCGCCACAATCACAAGATTGATAAGCCAAAAGG
182 C--AAT-G-AT--TTTATG-GA--AA--ATAGG-G-CA-AAGGA-AACATTTCCATG-CAAAA-G
* * * ** ** ** ** ** * * * * *
132763 AATGATCACCACA-A-GAGTCTTGGCCTCTTGATAAG-ATCCCG-AAAAATTGGCTCACTTA-AG
230 AA-AATCATCA-ATACCA-T-TTACCCTAATGAGGAGAAT-GTGTTTATAGTGCCT-AATCACA-
* * * * * * * * * * * *
132823 AAGTTAA-GAATCACACTCTCAC-ACAA--AATG--TGTTTAATTTGCAAGTATC-AA-TGTCTG
288 AAATGAATGAA-GA-TCT-TTACTAGAATCCATGTTTGTCTCATTTG-AGGCA-CGAACT-T-AG
**** ** * *** * * *
132880 -CCCCCTCCAAATCTGCTTACAAG--AG-CTTATATATGC---CCTCATAAGC--CATAGTTAAC
346 ACATTATAAAAAT-TGGTGGGAAGAAAGCCTT-TCT-TGCGAAAC-CA-AAGCGTCA-A--TATC
*** * * * * * * * * ****
132936 -ACAAACCCTAAGG-GGCT-T-ATTATGCTAACAAGCCCAACTCTTAGTTAAACCCA-AATAACA
403 GTGTATCCTTATGGAGACTATGTTTATGGT-----GCCTAA-TCCT-G--AAA---AGAATGGGG
** *
132996 AGTTTTTATG-CTA--AAT-
456 A-TTAGTATGACTATTCATG
*** ** *** ** ** * * * ***
133012 AAAGTCCAAAGCAAGTCACAACCAGC-AGGCCTTTTTATTACAAAA----T--AACCCAAGTCCT
1 TTTGTCTTATTTAAGAGACAA--A-CTTTG--ATTCTATCA-AAAACGGTTGAAAGAAAAG--CT
* * * * * ** * *
133070 AATTCAATCCATTG-GAGC-CCATATCTTCCAAATAT-ATGCAAT--TAACTAGCTCGGG-CTCC
58 --TT---T-C-TTGCGA-CACCAAAGCAT-C-AATGTCATG-TATCCTAA-T-G-AAGGGAAT-G
* * * * * * * * * * * * * * *
133129 TCTAACTCCAAATTGGGT-CTACT-TTTAAATAGGCCA-GCA-ACCATCTTCTCTAG-GTC-TTC
108 TGT---T----TTTGGTTCCCAATCATGAAA-A-G-AATGGAGA-C-TGTTAT-GAGAATCAATG
* ** *** * * * ** * * * **
133188 CTTTATCCTCT-TTGCCTTTGCCCTCG-TCATTGGTCCT-T-GAAACCCTTCCAACGCCTTCAGG
160 C-TT-GCCT-TATT---TAAGGGAT-GAACAATGATTTTATGGAAA---AT---AGGGC-AAAGG
* * **** **** * ** ***
133249 --TCTTTGTCTTCAATGGACCTTCCTTGGTTTTCATCAAACACTAAAGCATCAATGTCATTTATC
211 AAACATT-TC--C-AT-G--C--AAAAGAAAATCATC--A-A-T--ACCATTTACCC--------
* * * * * ** **
133312 CTAATGAAGG-GAATGTGTTTTTGGTTCCCAACCGTGAAAA-GAATGGTGA-CTATTA-TGAGAA
253 -TAATG-AGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCT-TTACT-AGAA
* * * * * * * * ** * * **
133373 TCAACGCTTGCCTTATTTAAGGGGA-GAA-TAATGATTTTATGGAAAATAGG-GCAAAGGAAA-C
313 TCCATGTTTGTCTCATTTGA-GGCACGAACTTA-GACATTAT-AAAAATTGGTGGGAA-GAAAGC
* * * ** * * * * * * ** * *
133434 ATTTCCATGCAAAAGAAAATCATCAATATCATTTACCCTAAT-GAGGAAAATGCGTTTATAGTAC
374 CTTT-CTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGGA-GACTAT--GTTTATGGTGC
** * *
133498 CTAATCAC--AAAACGAATGAAGATCT-TTACTAGA--ATCCATG
435 CTAATC-CTGAAAA-GAATGGGGAT-TAGTA-T-GACTATTCATG
** * * * * * * * * *
133538 TTTGTCTCGTTTGAGACACGAACTTAGACAT-TAT-AAAAATTGGTAGGAAG-AAAGCCTTTCTT
1 TTTGTCTTATTTAAGAGACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTTTCTT
* * * * * * * * * * * ** * *
133600 GCAAAACC-AATCGTCAATATCACGCATCCTTATG-AGAAGACA-ATGTTTATGGTGGCTAATCC
64 GCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GGA-ATGTGTTTTTGGTTCCCAATCA
* * * ** **
133662 TGAAAAGAAT-GAGGA--G-TATGACTATTCACAT--TTGTCTTA-TTAAGGAGACAAACTTTGA
127 TGAAAAGAATGGA-GACTGTTATGA-GAATCA-ATGCTTGCCTTATTTAAGG-GATGAACAATGA
* * * * * * * * * * ** *
133720 TTCTAT-CAAAA-ACGGCTGAAAGAAAAGC-TTTTCTTGCGACACAAAAGCATCAATGTCATGTA
188 TTTTATGGAAAATAGGGC--AAAGGAAA-CATTTCCATGCAAAAGAAAATCATCAATACCATTTA
* ** * * * * * * *
133782 TCCTTTTGAAGG-GAATGCGCTTT-TGGTTCCCAATCATGAAAA-GAATGGAGA-CTATTACAAG
250 CCCTAATG-AGGAGAATGTG-TTTATAGTGCCTAATCA-CAAAATGAATGAAGATCT-TTACTAG
* * ** * * * ** * **
133843 AATCAATGCTTACCTTATTT-AGGGGATGAAC-TATGATTTTATAGAAAATAGG-GCAAAGGAAA
311 AATCCATGTTTGTCTCATTTGA-GGCACGAACTTA-GACATTATA-AAAATTGGTGGGAA-GAAA
* * * ** * * ** * * * * * *
133905 -CATTTCCATGCAAAAGAAAACCATCAATATTATTTACCCTCATAAGGAGAATGTGTTTATAGTG
372 GCCTTT-CTTGCGAAACCAAAGCGTCAATATCGTGTATCCT--TATGGAGACTATGTTTATGGTG
* * * * *
133969 CCTAATCAC--AAAATAATGAAGATGATTACTA-GAATCTT--TG
434 CCTAATC-CTGAAAAGAATG--G-GGATTAGTATGACTATTCATG
* * * * * * *
134009 TTTGTCTCATTTGAG-GCACAAACTTAGACAT-TAT-AAAAATTGG-TGAAAAAAAAGCCTTTCT
1 TTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTTTCT
* * ** * * * * * * * * * * * *
134070 TGCAAAACCAAAGTGTCAGTATCGTGTATCTTTATG-AGATGACTATGTTTATGGTGCCTAATCC
63 TGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAG-GGAATGTGTTTTTGGTTCCCAATCA
* * * * * * ** *
134134 TGAAAAGAATGGGGATTAG-TATGACTATTCACAT--TTGTCTTA-TTAATGAGACAAACATTGA
127 TGAAAAGAATGGAGACT-GTTATGA-GAATCA-ATGCTTGCCTTATTTAA-GGGATGAACAATGA
* * * * * * * * ** * ** **
134195 TTCTAT-CAGAAA-CGGTTG-AAAGAAAAGC-TTTTCTTGCGACACCAAAGCATCAATGTCATGA
188 TTTTATGGA-AAATAGG--GCAAAGGAAA-CATTTCCATGCAAAAGAAAATCATCAATACCATTT
* * * * * *
134256 ATCCTAATGAAGG-GAATGTGTTTTTGGCT-CCCAA-CA-ATGTAAA-AAATGGAGA-CTGTTA-
249 ACCCTAATG-AGGAGAATGTGTTTATAG-TGCCTAATCACA---AAATGAATGAAGATCT-TTAC
* * * * * * * ** * * **
134314 TGAGAATCAACA-CTTT-CCTTATTTAAGGAATGAAC-AATGATTTTATGGAAAA-TAGTGCAAA
308 T-AGAATC--CATGTTTGTCTCATTTGAGGCACGAACTTA-GACATTAT-AAAAATTGGTGGGAA
* * * ** * * * * * * * * *
134375 GGAAA-CATTTCCATGCAAAAGAAAATCATCAATAGCATTTACCCTAATAAGGAGAATGTGTTTA
368 -GAAAGCCTTT-CTTGCGAAACCAAAGCGTCAATATCGTGTATCCT--TATGGAGACTATGTTTA
* * ** * * *
134439 TAGTGCCTAATCAC--AAAATAAATGAAGATCT-TTACTAGA--ATCCATA
429 TGGTGCCTAATC-CTGAAAA-GAATGGGGAT-TAGTA-T-GACTATTCATG
* * * * * * * * * *
134485 CTTGACTCATTT--GAGGCATGAACTTAGACTT-T-GCAAAAATTGGTGGGAAG-AAAGCCTTTC
1 TTTGTCTTATTTAAGAGACA--AACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTTTC
* * * * * *
134545 TCGCGAAACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATCTATTTTTAG-TCCCGAACC
62 TTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCC-AATC
* * * * * *
134609 AAGAAAAGAATGGAGACTGTTACGATAATCAACGCTTGCCTTATTTAAGGGATGAATAGTGATTT
126 ATGAAAAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTT
* *
134674 TATGGAAAATATGGCAAAGGAAATATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAA
191 TATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAA
* * *
134739 TGAGGCGAATGTGCTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTAATAGAATCCATGTT
256 TGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTT
* *
134804 TGTCTCATTTGAGGCACAAACTTACACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAA
321 TGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAA
*
134869 ACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGGCTATGTTTATGGTGCCTAATCCTGAAAAG
386 ACCAAAGCGTCAATATCGTGTATCCTTATG-G-AGACTATGTTTATGGTGCCTAATCCTGAAAAG
134934 AATGGGGATTAGTATGACTATTCATG
449 AATGGGGATTAGTATGACTATTCATG
* * *
134960 TTTGTCTTATTTAAGAGACAAACTTTGATTCCATCAAAAATGGTTGAACGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* *
135025 GACACCAAAACGTCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
** * * * *
135090 AAGAATGGAGACTACTATGAGAATCAATGCTTGCCATATTTAGGGGATGAACTACGATTTTATGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* * * *
135155 AAAATTGGGCAAGGGAAACATTTCCATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGA
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
* * * *
135220 AGAATGTGTTTATAATGCCTAATCACAAAATGAATGAAGATCATTACTACAATTCATGTTTGTCT
261 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
* ** *
135285 CATTTGAGGCACGAAATTAGACATTATAAAAATTGGTGCAAAGAAAGCCTTTCTTCCGAAACCAA
326 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
* * * *
135350 AGCATCAATATCGTGTATCCATATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATAG
391 AGCGTCAATATCGTGTATCCTTATG-G-AGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
* **
135415 GGATTAGTAAGACTATTCACA
454 GGATTAGTATGACTATTCATG
* * *
135436 TTTGTCTTATTAAAGAGATAAACTTTGATTCTATAAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
** ** * * * *
135501 GACACCAAAGTGTCAATGAGAAGTATCCTAGTGAAGGGAATGCGTTTTTGGTTCCTAATCATGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * * ***
135566 AAGAATGGAGACTGGTACGAGAATCAATGCTTGCCTTATTTAAGGGATGGATTTTGATTTTA-GG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* * * * * *
135630 AAAAATAGGGCAAAGGAAACATTTCCAAGCAAAA-AAAAACATCAATATCATTTACCGTCATGAA
196 -AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* ** ** * * *
135694 GAGAACGCATTTATCA-TGCCTAATCACAAAATGAATGAAGATAATTACTATAATCCTTATTTGT
260 GAGAATGTGTTTAT-AGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGT
* * * * *
135758 CTCCTTTGAGGCACAAACTTAGACAATGTAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAACCC
324 CTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* * * *
135823 AAAGCATCAATATGGTGAATCCTTAT-GAGACTATGTTTATGGTGCGTAATCCTGAAAAAGAATG
389 AAAGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCTAATCCTG-AAAAGAATG
*
135887 AGGATTAGTATGACTATTCATG
453 GGGATTAGTATGACTATTCATG
* *
135909 TTTGTCTTATTTAAGAGACAAACTTTGGTTCTATCAAAAACGGTTCAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* *
135974 GACACCAAAGCATTAATGTCATGTATCCTAATGAAGGAAATGTGTTTTTGGTTCCCAATCATGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * *
136039 AAGAATGGAGACTGTTATGAGAATCAACGCTTGCCTTATTTAAGGGATGAATAACGATTTTATGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* *
136104 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAAAAAAAAATTATCAATACCATTTACCCTAATG
196 AAAATAGGGCAAAGGAAACATTTCCATGC---AAAAGAAAATCATCAATACCATTTACCCTAATG
* * * *
136169 AGGAGAATGTGTTTAGAGTGCCGAATCACAAAATGAATGAAGATCATTACTGGAATCCATGTTTG
258 AGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTG
*
136234 TCTCATTTGAGGCACGAACTTAGACATTATAAAAATTAGTGGGAAGAAAGCCTTTCTTGC-AAAC
323 TCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAA-
* * * *
136298 CCAAAGTGTCAATATCGTGAATCCTTAT-GAGATTATGTTTATGGTGCCTAATCTTGAAAAGAAT
387 CCAAAGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCTAATCCTGAAAAGAAT
* *
136362 GGGGATTTGTATGACTATTCACG
452 GGGGATTAGTATGACTATTCATG
* * *
136385 TTTGTCTTATTTAAGAGACAAACTTTTATTCTATCAAAAATGATTGAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* * * *
136450 GACACCAAAGCATCAATGTCATGCATCTTAATGAAGGGAATGTGCTTTTGGTTCCTAATCATGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* *
136515 AAGAATGGAGACTATTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAATAATGATTTTATGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* *
136580 AAAATAGGGCAAAGGAAACATTTCCAAGCAAAAGAAAATCATCAATACCATTTACCCTCATGAGG
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
* * * * *
136645 AGAATGTGTTTGTCA-TGCCTAATCAGAAAATGAATGAAGA-CAATTACTATAATCCTTGTTTGT
261 AGAATGTGTTTAT-AGTGCCTAATCACAAAATGAATGAAGATC-TTTACTAGAATCCATGTTTGT
* * * *
136708 CTCATTTGAGGCACAAACTTAGAAAATATAAAAATTGGTGGGAAGAAAGCC-TTCTTGCGAACCC
324 CTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* * * * * *
136772 CAAGCGTCAATATCGTGAATCATTAT-GAGACTATGTTTATGGTGCCGAATCCTGACAGGAATGG
389 AAAGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
* *
136836 GGATTAGCATGACTATTCACG
454 GGATTAGTATGACTATTCATG
* * *
136857 TTTTTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTAAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* *
136922 GACACCAAAGCATCATTGTCATGTATCCTAATGAAGGGAATGTGTTTTTAGTTCCCAATCATGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * * *
136987 AAGAATGGAGACTATTGTGAGAATCAACGCTTGCCTTATTTAAGGGATGAATAATGATTTTATGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* * *
137052 AAAATAGGGCAAAGGAAACATTTCCAAGAAAAAGAAAATCATCAATACCATTTACCCTCATGAGG
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
* * * ** * * *
137117 AGAATGTTTTTGTCA-TCCCTAATCACAAAATGAATGAAGATAATTACTATAGTCCTTGTTTGTC
261 AGAATGTGTTTAT-AGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * *
137181 TCATTTGAGGCACAAACTTAGAAAATATAAAAATTGGTGGGAAGAAAGCCTTTCTTGC-AAACCC
325 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAA-CC
* * * *
137245 CAAGGGTCAATATCGTGAATCATTAT-GAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
389 AAAGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
* **
137309 GGATTAGTATAACTATTCACA
454 GGATTAGTATGACTATTCATG
* * * * * *
137330 TTTGTCTTATTAAAGAGACAAACTTTAATTCTATTAGAAACGGTTGAAAGAAAGGCTTTTCATGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* * *
137395 GACACCAAAGCATCAATGTCATGTATCCTAATGAAAGGAAAGTGTTTTTGGATCCCAATCATGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * * * *
137460 AAGAATGGAGACTGTTATGAAAATCAACGCTTGCCTTATTTAAGGGATAAATAAAGATTTTATGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
** * * * * *
137525 AAAATAGGGCAAAGGAAACATTTCCATGCGGAAGAAAATCGTCAACACCATTTACCCTCAGGAGC
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
* * * * ** * *
137590 AGAATGTGTTTGTCGTGCCTAATCACAAAATTATTGAAGATAATTACTATAATCCTTGTTTGTCT
261 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
* ** * * * *
137655 CATTTGTGGCATAAACTTAGACAATATAAAAATTGGTAGGAAGAAAGCCGTTCTTGCGAACCCAA
326 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
* * *
137720 AGCATCAATATCGTGAATCCTTAT-GAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGG
391 AGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
*
137784 ATTAGTATGACTATTTATG
456 ATTAGTATGACTATTCATG
*
137803 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGT
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* * ****
137868 GACACCAAAGCATCAATGTCACGTATCCTAATAAAGGGAATG-GAGACT-G-T-----T-ATGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * * * *
137924 AAGAATGGAGACTGTTATGAAAATCAACGCTTGCCTTATTTAAGGGATAAATAAAGATTTTATGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
** * * * * *
137989 AAAATAGGGCAAAGGAAACATTTCCATGCGGAAGAAAATCGTCAACACCATTTACCCTCAGGAGC
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
* * * * ** * *
138054 AGAATGTGTTTGTCGTGCCTAATCACAAAATTATTGAAGATAATTACTATAATCCTTGTTTGTCT
261 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
* ** * * * *
138119 CATTTGTGGCATAAACTTAGACAATATAAAAATTGGTAGGAAGAAAGCCGTTCTTGCGAACCCAA
326 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
* * *
138184 AGCATCAATATCGTGAATCCTTAT-GAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGG
391 AGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
*
138248 ATTAGTATGACTATTTATG
456 ATTAGTATGACTATTCATG
*
138267 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGT
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* * * * *
138332 GACACCAAAGCATCAATGTCACGTATCCTAATAAAGGGAATGTGTTCTTGGTACCCAACCATGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * ** * *
138397 AAGAATTGAGACTGGTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGA
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* * * * * ***
138462 AAAATAGGGCAAAAGAAACATTTCCACGCAGAAGAAAATCGTCAACACCATTTACCCTCCGGAGG
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
* * * * ** * *
138527 AGAATGTGTTTGTCGTGCCTATTCACAAAATGATTGAAGATAATTACTATAATCCTTGTTTGTCT
261 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
* ** * * * *
138592 CATTTGTGGCATAAACTTAGACAATATAAAAATTGGTGGGAAGAAAGCCGTCCTTGCGAACCCAA
326 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
* * *
138657 AGCGTCAATATCGTGAATCCTTAT-GAGACTATATTTATGGTGCCTGATCCTGAAAAGAATGGGG
391 AGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
*
138721 ATTAGTATGACTATTTATG
456 ATTAGTATGACTATTCATG
* * * * *
138740 TTTGTCTTATTTAAGAGACAAACTTTTATTCTAACAAAAATGGTTCAAAGAAAAGCTTTTCTTGT
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* * ** *
138805 GACACCAAAGCATCAATGTTATGTATCGTAACAAAGGGAATGTGTTCTTGGTTCCCAATCATGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * * ** *
138870 AAGAATGGAGATTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACTTTGA-TTTAAGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* * * * * * * *
138934 AAAGTATGGCAAATGATACATTTCTAAGCAAAAGAAAATCATCAATATCC-TTTACCTTAATGTG
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAG
* ** * *
138998 TAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATAATTACTATAATCCTTGTTTGTC
260 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
*
139063 TCATTTGAGGCACGAACTTAGACATTATAAAAATTAGTGGGAAGAAAGCCTTTCTTGC-AAACCC
325 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAA-CC
* * *
139127 AAAGTGTCAATATCGTGAATCCTTAT-GAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGG
389 AAAGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
139191 GGATTAGTATGACTATTCATG
454 GGATTAGTATGACTATTCATG
*
139212 TTTGTCTTATCTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
139277 GACACCAAAGCATCAATGTCATGTATCCTAAT-AAGGGGAATGTGTTTTTGGTTCCCAATCATGA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAA-GGGAATGTGTTTTTGGTTCCCAATCATGA
* * *
139341 AATGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATAAATAATGATTTTATG
130 AAAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATG
* * * *
139406 GAAAATAGGGCAAAGGAAACATTTCCATGCAGAAGAAAATCATCAACACCATTTACCCTCAGGAG
195 GAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* * * ** * *
139471 GAGAATGTGTTTGTCGTGCCTAATCACAAAATGATTGAAGATAATTACTATAATCCTTGTTTGTC
260 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* ** * * *
139536 TCATTTGTGGCATAAACTTAGACAATATAAAAATTGGTGGGAAGAAAGCCGTTCTTGCGAACCCA
325 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
*
139601 AAGCGTCAATATCGTGAATCCTTAT-GAGACTATGTTTATGGTGCCTAAATCCTGAAAAGAATGG
390 AAGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCT-AATCCTGAAAAGAATGG
*
139665 GGATTAGTATGGCTACTT-ATG
454 GGATTAGTATGACTA-TTCATG
*
139686 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* *
139751 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCACGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * * ** *
139816 AAGAATGGAGATTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* * * * *
139881 AAAATATGGCAAATGAAACATTTCTAAGCAAAAGAAAATCATCAATATCC-TTTACCTTAATGAG
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAG
* *
139945 GAGAAAGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACT-GAAATCCATGTTTGT
260 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAG-AATCCATGTTTGT
* * *
140009 CTCATTTGAGGCACGAACTTAGACATTACAACAATTAGTGGGAAGAAAGCCTTTCTTGC-AAACC
324 CTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAA-C
* * * *
140073 CAGAGCGTCAATATCGTGAATCCTTAT-GAGACTATGTTTATGGTGCCTAATCCTGAAAAAAATA
388 CAAAGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATG
* *
140137 GGGATTTGTATGACTATTCACG
453 GGGATTAGTATGACTATTCATG
*
140159 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* * * *
140224 AACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTTCCAATCACGAA
66 GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
* * * * * ** *
140289 ATGAATGGAGATTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAGCTTTGA-TTTAAGG
131 AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
* * * * *
140353 AAAATATGGCAAATGAAACATTTCTAAGCAAAAGAAAATCATCAATATCC-TTTACCTTAATGAG
196 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAG
* *
140417 GAGAACGTGTTTATAGTGCCTAATCGA-AAAATGAATGAAGATCTTTACTAGAATCCATGTTTAT
260 GAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGT
* * ** * *
140481 CTCATTTGAGACGCGAACTTAGACACAATAAAAATTGGTGGGAAGAAAGCGTTTCTTGAGAAACC
324 CTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* * * *
140546 AAAGCTTCAATATCATGTATCCTTATGAGAAAACTATGTTTATGGTGCCTAATCATGAAAAGAAT
389 AAAGCGTCAATATCGTGTATCCTTATG-G-AGACTATGTTTATGGTGCCTAATCCTGAAAAGAAT
* **
140611 GGGGATTAG-AGAGACTATTCACA
452 GGGGATTAGTA-TGACTATTCATG
*
140634 TTTGTCTTATTTAAGAGACAATCTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
1 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
* *
140699 GACACCAAAGCGTTAATGTCATGTATC
66 GACACCAAAGCATCAATGTCATGTATC
140726 GTGTGCAAGA
Statistics
Matches: 9788, Mismatches: 1354, Indels: 775
0.82 0.11 0.07
Matches are distributed among these distances:
464 455 0.05
465 3 0.00
466 1 0.00
470 4 0.00
471 125 0.01
472 1531 0.16
473 2366 0.24
474 785 0.08
475 1688 0.17
476 2044 0.21
477 225 0.02
478 15 0.00
479 15 0.00
480 7 0.00
481 9 0.00
482 5 0.00
483 1 0.00
484 3 0.00
485 9 0.00
486 3 0.00
487 7 0.00
488 6 0.00
489 15 0.00
490 34 0.00
491 27 0.00
492 35 0.00
493 35 0.00
494 14 0.00
495 9 0.00
496 14 0.00
497 12 0.00
498 8 0.00
499 10 0.00
500 11 0.00
501 10 0.00
502 4 0.00
503 4 0.00
504 2 0.00
505 5 0.00
506 11 0.00
507 7 0.00
508 12 0.00
509 7 0.00
510 2 0.00
511 8 0.00
512 9 0.00
513 8 0.00
514 4 0.00
515 9 0.00
516 4 0.00
517 11 0.00
518 5 0.00
519 1 0.00
520 4 0.00
521 2 0.00
522 9 0.00
523 14 0.00
524 10 0.00
525 11 0.00
526 26 0.00
527 10 0.00
528 23 0.00
529 14 0.00
530 3 0.00
531 3 0.00
534 5 0.00
ACGTcount: A:0.36, C:0.16, G:0.18, T:0.30
Consensus pattern (474 bp):
TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGC
GACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAA
AAGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTATGG
AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
AGCGTCAATATCGTGTATCCTTATGGAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
ATTAGTATGACTATTCATG
Found at i:134813 original size:317 final size:317
Alignment explanation
Indices: 134218--134899 Score: 994
Period size: 317 Copynumber: 2.2 Consensus size: 317
134208 GGTTGAAAGA
* * * * * *
134218 AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGAATCCTAATGAAGGGAATGTGTTTTTGG
1 AAAGCCTTTCTTGCGAAACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATCTATTTTTAG
* *
134283 CTCCCAACAATGTAAAAAATGGAGACTGTTATGAGAATCAACACTTTCCTTATTTAAGGAATGAA
66 CTCCCAACAATGTAAAAAATGGAGACTGTTACGAGAATCAACACTTGCCTTATTTAAGGAATGAA
*
134348 CAATGATTTTATGGAAAATAGTGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATAGCAT
131 CAATGATTTTATGGAAAATAGTGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCAT
* *
134413 TTACCCTAATAAGGAGAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGATCTTTACTAGA
196 TTACCCTAATAAGGAGAATGTGCTTATAGTGCCTAATCACAAAATAAATGAAGATCTTTAATAGA
** * * *
134478 ATCCATACTTGACTCATTTGAGGCATGAACTTAGACTTTGCAAAAATTGGTGGGAAG
261 ATCCATACTTGACTCATTTGAGGCACAAACTTACACATTACAAAAATTGGTGGGAAG
*
134535 AAAGCCTTTCTCGCGAAACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATCTATTTTTAG
1 AAAGCCTTTCTTGCGAAACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATCTATTTTTAG
* * *
134600 -TCCCGAACCAA-G-AAAAGAATGGAGACTGTTACGATAATCAACGCTTGCCTTATTTAAGGGAT
66 CTCCC-AA-CAATGTAAAA-AATGGAGACTGTTACGAGAATCAACACTTGCCTTATTTAAGGAAT
* * *
134662 GAATAGTGATTTTATGGAAAATA-TGGCAAAGGAAATATTTCCATGCAAAAGAAAATCATCAATA
128 GAACAATGATTTTATGGAAAATAGT-GCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA
* * *
134726 CCATTTACCCTAATGAGGCGAATGTGCTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTAA
192 CCATTTACCCTAATAAGGAGAATGTGCTTATAGTGCCTAATCACAAAATAAATGAAGATCTTTAA
** * *
134791 TAGAATCCATGTTTGTCTCATTTGAGGCACAAACTTACACATTATAAAAATTGGTGGGAAG
257 TAGAATCCATACTTGACTCATTTGAGGCACAAACTTACACATTACAAAAATTGGTGGGAAG
* * * *
134852 AAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGA
1 AAAGCCTTTCTTGCGAAACCAAAGCATCAATGTCATGTATCCTAATGA
134900 GAAGGCTATG
Statistics
Matches: 326, Mismatches: 35, Indels: 8
0.88 0.09 0.02
Matches are distributed among these distances:
316 9 0.03
317 314 0.96
318 3 0.01
ACGTcount: A:0.37, C:0.16, G:0.18, T:0.28
Consensus pattern (317 bp):
AAAGCCTTTCTTGCGAAACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATCTATTTTTAG
CTCCCAACAATGTAAAAAATGGAGACTGTTACGAGAATCAACACTTGCCTTATTTAAGGAATGAA
CAATGATTTTATGGAAAATAGTGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCAT
TTACCCTAATAAGGAGAATGTGCTTATAGTGCCTAATCACAAAATAAATGAAGATCTTTAATAGA
ATCCATACTTGACTCATTTGAGGCACAAACTTACACATTACAAAAATTGGTGGGAAG
Found at i:135050 original size:159 final size:158
Alignment explanation
Indices: 133588--140725 Score: 1192
Period size: 159 Copynumber: 45.3 Consensus size: 158
133578 TGGTAGGAAG
* * * * * *
133588 AAAGCCTTTCTTGCAAAACC-AATCGTCAATATCACGCATCCTTATGAGAAGACA-ATGTTTATG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGA-ATATGTTTATG
* * **
133651 GTGGCTAATCCTGAAAAGAAT-GAG--GAGTATGACTATTCACATTTGTCTTA-TTAAGGAGACA
65 GTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAA-GAGACA
*
133712 AACTTTGATTCTATCAAAAACGGCTG-AAAGA
129 AACTTTGATTCTAT-AAAAATGG-TGCAAAGA
* * * * ** * **
133743 AAAGCTTTTCTTGCGACACAAAAGCATCAATGTCATGTATCCTTTTGA-AGGGAATGCGCTTT-T
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGA-AGAATATG-TTTAT
* * * * * * ** * * ** * * *
133806 GGTTCCCAATCATGAAAAGAATGGAGACTATTA-CAAGAATCAATGCTTACCTTATTTAGGGGAT
64 GGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGAGAC
* * * *
133870 GAACTATGATTTTATAGAAAATAGG-GCAAAGG
128 AAACTTTGATTCTATA-AAAAT-GGTGCAAAGA
* * * ** * * * * * * * * * *
133902 AAA-CATTTCCATGCAAAAGAAAACCATCAATATTATTTACCCTCATAAGGAGAATGTGTTTATA
1 AAAGC-TTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * * * *
133966 GTGCCTAATCAC--AAAATAATGAAGATGATTACTA-GAATCTT--TGTTTGTCTCATTTGAG-G
65 GTGCCTAATC-CTGAAAAGAATG--GA-GATTAGTATGACTATTCATGTTTGTCTTATTTAAGAG
* * *
134025 CACAAACTTAGACAT-TATAAAAATTGGTG-AAAAA
126 -ACAAACTTTGA-TTCTATAAAAA-TGGTGCAAAGA
* * * * * * * * *
134059 AAAGCCTTTCTTGCAAAACCAAAGTGTCAGTATCGTGTATCTTTATGAGATGACTATGTTTATGG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* **
134124 TGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACATTTGTCTTA-TTAATGAGACAA
66 TGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAA-GAGACAA
* * *
134188 ACATTGATTCTATCAGAAACGGTTG-AAAGA
130 ACTTTGATTCTAT-AAAAATGG-TGCAAAGA
* * * * * * *
134218 AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGAATCCTAATGA-AGGGAATGTGTTTTTG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGA-AGAATATGTTTATG
* * * * * ** *
134282 GCT-CCCAA-CAATGTAAAA-AATGGAGACT-GTTATGA-GAATCAACACTTT-CCTTATTTAAG
65 G-TGCCTAATC-CTG-AAAAGAATGGAGATTAG-TATGACTATTC-A-TGTTTGTCTTATTTAAG
** * * * *
134341 -GA-ATGAACAATGATTTTATGGAAAATAGTGCAAAGG
124 AGACA--AACTTTGATTCTAT-AAAAATGGTGCAAAGA
* * * ** * * * * * * * * *
134377 AAA-CATTTCCATGCAAAAGAAAATCATCAATAGCATTTACCCTAATAAGGAGAATGTGTTTATA
1 AAAGC-TTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * * ** * *
134441 GTGCCTAATCAC--AAAATAAATGAAGATCT-TTACTAGA--ATCCATACTTGACTCATTT--GA
65 GTGCCTAATC-CTGAAAA-GAATGGAGAT-TAGTA-T-GACTATTCATGTTTGTCTTATTTAAGA
* * ** **
134499 GGCATGAACTTAGACTT-TGCAAAAATTGGTGGGAAG-
125 GACA--AACTTTGA-TTCTATAAAAA-TGGTGCAAAGA
* * * * * * * * *
134535 AAAGCCTTTCTCGCGAAACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATCTATTTTTA
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGA-AGAATATGTTTATG
* * * * * * * * * *
134599 GTCCCGAA-CCAAGAAAAGAATGGAGACT-GTTACGA-TAATCAACGCTTGCCTTATTTAAGGGA
65 GTGCCTAATCC-TGAAAAGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAGA
** * * *
134661 TGAA-TAGTGATTTTATGGAAAATAT-G-GCAAAGG
127 CAAACT-TTGATTCTAT--AAAA-ATGGTGCAAAGA
** * * * ** * * * * * ** * * *
134694 AAATATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGCGAATGTGCTTATAG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * *
134759 TGCCTAATCAC--AAAATGAATGAAGATCT-TTAATAGA--ATCCATGTTTGTCTCATTTGAG-G
66 TGCCTAATC-CTGAAAA-GAATGGAGAT-TAGT-AT-GACTATTCATGTTTGTCTTATTTAAGAG
** * **
134818 CACAAACTTACACAT-TATAAAAATTGGTGGGAAG-
126 -ACAAACTTTGA-TTCTATAAAAA-TGGTGCAAAGA
* * * **
134852 AAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGGCTATGTTTATGG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
*
134917 TGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAA
66 TGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAA
* *
134982 CTTTGATTCCATCAAAAATGGTTG-AACGA
131 CTTTGATTCTAT-AAAAATGG-TGCAAAGA
* * * * * *
135011 AAAGCTTTTCTTGCGACACCAAAACGTCAATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGA-AGAATATGTTTATG
* * * * * * * * * * * * **
135075 GTTCCCAATCATGAAAAGAATGGAGACTACTATGA-GAATCAATGCTTGCCATATTTAGGGGATG
65 GTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGAGACA
** * * * *
135139 AACTACGATTTTATGGAAAATTGG-GCAAGGG
129 AACTTTGATTCTAT--AAAAATGGTGCAAAGA
* * * ** * * * * * *
135170 AAA-CATTTCCATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGAAGAATGTGTTTATA
1 AAAGC-TTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * * * * *
135234 ATGCCTAATCAC--AAAATGAATGAAGATCATTACT-ACAATTCATGTTTGTCTCATTTGAG-GC
65 GTGCCTAATC-CTGAAAA-GAATGGAGATTAGTA-TGACTATTCATGTTTGTCTTATTTAAGAG-
* *
135295 ACGAAA-TTAGACAT-TATAAAAATTGGTGCAAAG-
126 AC-AAACTTTGA-TTCTATAAAAA-TGGTGCAAAGA
* * * * *
135328 AAAGCCTTTCTTCCGAAACCAAAGCATCAATATCGTGTATCC-ATATGAGAAGACTATGTTTATG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTA-ATGAGAAGAATATGTTTATG
* * ** * *
135392 GTGCCTAATCCTAAAAAGAATAGG-GATTAGTAAGACTATTCACATTTGTCTTATTAAAGAGATA
65 GTGCCTAATCCTGAAAAGAAT-GGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACA
*
135456 AACTTTGATTCTATAAAAAACGGTTG-AAAGA
129 AACTTTGATTCTAT-AAAAATGG-TGCAAAGA
* * * * * * ** *
135487 AAAGCTTTTCTTGCGACACCAAAGTGTCAATGA-GAAGTATCCTAGTGA-AGGGAATGCGTTTTT
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAAT-ATCATGTATCCTAATGAGA-AGAATATGTTTAT
* * * * * * * * * * *
135550 GGTTCCTAATCATGAAAAGAATGGAGACTGGTACGA-GAATCAATGCTTGCCTTATTTAAGGGAT
64 GGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGAGAC
** * * * *
135614 GGATTTTGATTTTAGGAAAAATAGG-GCAAAGG
128 AAACTTTGATTCTA-TAAAAAT-GGTGCAAAGA
* ** ** * * * * ****
135646 AAA-CATTTCCAAGC-AAAAAAAAACATCAATATCATTTA-CCGTCATGA-AGAGAACGCATTTA
1 AAAGC-TTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCC-TAATGAGA-AGAATATGTTTA
** * * * * ** *
135707 TCATGCCTAATCAC--AAAATGAATGAAGA-TA--ATTACTATAATCCTTATTTGTCTCCTTTGA
63 TGGTGCCTAATC-CTGAAAA-GAATGGAGATTAGTATGACTAT--T-CATGTTTGTCTTATTTAA
* *** * **
135767 G-GCACAAACTTAGACAATGTAAAAATTGGTGGGAAG-
123 GAG-ACAAACTTTGATTCTATAAAAA-TGGTGCAAAGA
* * * ** * * *
135803 AAAGCCTTTCTTGCGAACCCAAAGCATCAATATGGTGAATCCTTAT--G-AGACTATGTTTATGG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
*
135865 TGCGTAATCCTGAAAAAGAAT-GAGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACA
66 TGCCTAATCCTG-AAAAGAATGGA-GATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACA
* * *
135929 AACTTTGGTTCTATCAAAAACGGTTCAAAGA
129 AACTTTGATTCTAT-AAAAATGGTGCAAAGA
* * * * * * *
135960 AAAGCTTTTCTTGCGACACCAAAGCATTAATGTCATGTATCCTAATGA-AGGAAATGTGTTTTTG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAG-AATATGTTTATG
* * * * * * * * * * *
136024 GTTCCCAATCATGAAAAGAATGGAGACT-GTTATGA-GAATCAACGCTTGCCTTATTTAAGGGAT
65 GTGCCTAATCCTGAAAAGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAGAC
* ** * * *
136087 GAA-TAACGATTTTATGGAAAATAGG-GCAAAGG
128 AAACT-TTGATTCTAT-AAAAAT-GGTGCAAAGA
* * * ** *** * * * * *
136119 AAA-CATTTCCATGCAAAAAAAAAAAATTATCAATACCATTTACCCTAATGAGGAGAATGTGTTT
1 AAAGC-TTTTCTTGC---GAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTT
* * * * * * *
136183 A-GAGTGCCGAATCAC--AAAATGAATGAAGATCATTACTGGA--ATCCATGTTTGTCTCATTTG
62 ATG-GTGCCTAATC-CTGAAAA-GAATGGAGATTAGTA-T-GACTATTCATGTTTGTCTTATTTA
* * * * **
136243 AG-GCACGAACTTAGACAT-TATAAAAATTAGTGGGAAG-
122 AGAG-ACAAACTTTGA-TTCTATAAAAA-TGGTGCAAAGA
* * * * * *
136280 AAAGCCTTTCTTGC-AAACCCAAAGTGTCAATATCGTGAATCCTTAT--G-AGATTATGTTTATG
1 AAAGCTTTTCTTGCGAAA-CCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * *
136341 GTGCCTAATCTTGAAAAGAATGGGGATTTGTATGACTATTCACGTTTGTCTTATTTAAGAGACAA
65 GTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAA
* *
136406 ACTTTTATTCTATCAAAAATGATTG-AAAGA
130 ACTTTGATTCTAT-AAAAATG-GTGCAAAGA
* * * * * * *
136436 AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGCATCTTAATGA-AGGGAATGTGCTTT-T
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGA-AGAATATG-TTTAT
* * * * * * * * * *
136499 GGTTCCTAATCATGAAAAGAATGGAGACTATTATGA-GAATCAATGCTTGCCTTATTTAAGGGAT
64 GGTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGAGAC
* * * * *
136563 GAA-TAATGATTTTATGGAAAATAGG-GCAAAGG
128 AAACT-TTGATTCTAT-AAAAAT-GGTGCAAAGA
* ** * ** * * * * * * * * * *
136595 AAA-CATTTCCAAGCAAAAGAAAATCATCAATACCATTTACCCTCATGAGGAGAATGTGTTTGTC
1 AAAGC-TTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * * * * * *
136659 ATGCCTAAT-CAGAAAATGAATGAAGACAATTACTAT-A--ATCCTTGTTTGTCTCATTTGAG-G
65 GTGCCTAATCCTGAAAA-GAATG--GA-GATTAGTATGACTATTCATGTTTGTCTTATTTAAGAG
* *** **
136719 CACAAACTTAGAAAATATAAAAATTGGTGGGAAG-
126 -ACAAACTTTGATTCTATAAAAA-TGGTGCAAAGA
* * * * * * * *
136753 AAAGC-CTTCTTGCGAACCCCAAGCGTCAATATCGTGAATCATTAT--G-AGACTATGTTTATGG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * * * *
136814 TGCCGAATCCTGACAGGAATGGGGATTAGCATGACTATTCACGTTTTTCTTATTAAAGAGACAAA
66 TGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAA
* **
136879 CTTTGATTCTATCAAAAACGGTTAAAAGA
131 CTTTGATTCTAT-AAAAATGGTGCAAAGA
* * * * * * * *
136908 AAAGCTTTTCTTGCGACACCAAAGCATCATTGTCATGTATCCTAATGA-AGGGAATGTGTTTTTA
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGA-AGAATATGTTTATG
* * * * * * * * * * * * **
136972 GTTCCCAATCATGAAAAGAATGGAGACTATTGTGA-GAATCAACGCTTGCCTTATTTAAGGGATG
65 GTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGAGACA
* * * *
137036 AA-TAATGATTTTATGGAAAATAGG-GCAAAGG
129 AACT-TTGATTCTAT-AAAAAT-GGTGCAAAGA
* ** ** ** * * * * * * * * * * *
137067 AAA-CATTTCCAAGAAAAAGAAAATCATCAATACCATTTACCCTCATGAGGAGAATGTTTTTGTC
1 AAAGC-TTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * * * * *
137131 ATCCCTAATCAC--AAAATGAATGAAGA-TA--ATTACTATAGTCCTTGTTTGTCTCATTTGAG-
65 GTGCCTAATC-CTGAAAA-GAATGGAGATTAGTATGACTAT--T-CATGTTTGTCTTATTTAAGA
* *** **
137190 GCACAAACTTAGAAAATATAAAAATTGGTGGGAAG-
125 G-ACAAACTTTGATTCTATAAAAA-TGGTGCAAAGA
* * * * * * * *
137225 AAAGCCTTTCTTGC-AAACCCCAAGGGTCAATATCGTGAATCATTAT--G-AGACTATGTTTATG
1 AAAGCTTTTCTTGCGAAA-CCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * ** *
137286 GTGCCTAATCCTGAAAAGAATGGGGATTAGTATAACTATTCACATTTGTCTTATTAAAGAGACAA
65 GTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAA
* * *
137351 ACTTTAATTCTATTAGAAACGGTTG-AAAGA
130 ACTTTGATTCTA-TAAAAATGG-TGCAAAGA
* * * * * *
137381 AAGGCTTTTCATGCGACACCAAAGCATCAATGTCATGTATCCTAATGA-AAGGAA-AGTGTTTTT
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAA-GAATA-TGTTTAT
* * * * * * * * *
137444 GGAT-CCCAATCATGAAAAGAATGGAGACT-GTTATGA-AAATCAACGCTTGCCTTATTTAAGGG
64 GG-TGCCTAATCCTGAAAAGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAG
* ** * * *
137506 ATAAA-TAAAGATTTTATGGAAAATAGG-GCAAAGG
126 ACAAACT-TTGATTCTAT-AAAAAT-GGTGCAAAGA
* * * ** * * * * * * * * * * *
137540 AAA-CATTTCCATGCGGAAGAAAATCGTCAACACCATTTACCCTCAGGAGCAGAATGTGTTTGTC
1 AAAGC-TTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * * * * **
137604 GTGCCTAATCAC--AAAATTATTGAAGA-TA--ATTACTATAATCCTTGTTTGTCTCATTTGTG-
65 GTGCCTAATC-CTGAAAA-GAATGGAGATTAGTATGACTAT--T-CATGTTTGTCTTATTTAAGA
* * *** *
137663 GCATAAACTTAGACAATATAAAAATTGGTAG-GAAG-
125 G-ACAAACTTTGATTCTATAAAAA-TGGT-GCAAAGA
** * * * * * *
137698 AAAGCCGTTCTTGCGAACCCAAAGCATCAATATCGTGAATCCTTAT--G-AGACTATGTTTATGG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * *
137760 TGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTTATGTTTGTCTTATTTAAGAGACAAA
66 TGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAA
*
137825 CTTTGATTCTATCAAAAACGGTTG-AAAGA
131 CTTTGATTCTAT-AAAAATGG-TGCAAAGA
* * * * * **
137854 AAAGCTTTTCTTGTGACACCAAAGCATCAATGTCACGTATCCTAAT-A-AAG-----G-GAATGG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * ** * * * * * * * *
137911 AGACT-GTTATGAAAAGAATGGAGACT-GTTATGA-AAATCAACGCTTGCCTTATTTAAGGGATA
66 TGCCTAATCCTGAAAAGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAGACA
** * * *
137973 AA-TAAAGATTTTATGGAAAATAGG-GCAAAGG
129 AACT-TTGATTCTAT-AAAAAT-GGTGCAAAGA
* * * ** * * * * * * * * * * *
138004 AAA-CATTTCCATGCGGAAGAAAATCGTCAACACCATTTACCCTCAGGAGCAGAATGTGTTTGTC
1 AAAGC-TTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * * * * * **
138068 GTGCCTAATCAC--AAAATTATTGAAGA-TA--ATTACTATAATCCTTGTTTGTCTCATTTGTG-
65 GTGCCTAATC-CTGAAAA-GAATGGAGATTAGTATGACTAT--T-CATGTTTGTCTTATTTAAGA
* * *** *
138127 GCATAAACTTAGACAATATAAAAATTGGTAG-GAAG-
125 G-ACAAACTTTGATTCTATAAAAA-TGGT-GCAAAGA
** * * * * * *
138162 AAAGCCGTTCTTGCGAACCCAAAGCATCAATATCGTGAATCCTTAT--G-AGACTATGTTTATGG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * *
138224 TGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTTATGTTTGTCTTATTTAAGAGACAAA
66 TGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAA
*
138289 CTTTGATTCTATCAAAAACGGTTG-AAAGA
131 CTTTGATTCTAT-AAAAATGG-TGCAAAGA
* * * * * *
138318 AAAGCTTTTCTTGTGACACCAAAGCATCAATGTCACGTATCCTAAT-A-AAGGGAATGTGTTCT-
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAA--GAATATGTT-TA
* * * * * * * * * *
138380 TGGTACCCAA-CCATGAAAAGAATTGAGACTGGTATGA-GAATCAATGCTTGCCTTATTTAAGGG
63 TGGTGCCTAATCC-TGAAAAGAATGGAGATTAGTATGACTATTC-ATGTTTGTCTTATTTAAGAG
** * *
138443 ATGAACTTTGATTTTAAGAAAAATAGG-GCAAA-A
126 ACAAACTTTGATTCT-ATAAAAAT-GGTGCAAAGA
* ** * * * * * *** * *
138476 GAAA-CATTTCCACGCAGAAGA--AAATCGTCAACACCATTTACCCTCCGGAGGAGAATGTGTTT
1 -AAAGC-TTTTCTTGC-GAA-ACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTT
* * * * * * * * *
138538 GTCGTGCCTATTCAC--AAAATGATTGAAGA-TA--ATTACTATAATCCTTGTTTGTCTCATTTG
62 ATGGTGCCTAATC-CTGAAAA-GAATGGAGATTAGTATGACTAT--T-CATGTTTGTCTTATTTA
* * * *** **
138598 TG-GCATAAACTTAGACAATATAAAAATTGGTGGGAAG-
122 AGAG-ACAAACTTTGATTCTATAAAAA-TGGTGCAAAGA
** * * * * * * *
138635 AAAGCCGTCCTTGCGAACCCAAAGCGTCAATATCGTGAATCCTTAT--G-AGACTATATTTATGG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * *
138697 TGCCTGATCCTGAAAAGAATGGGGATTAGTATGACTATTTATGTTTGTCTTATTTAAGAGACAAA
66 TGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAA
* * *
138762 CTTTTATTCTAACAAAAATGGTTCAAAGA
131 CTTTGATTCT-ATAAAAATGGTGCAAAGA
* * * * * * * *
138791 AAAGCTTTTCTTGTGACACCAAAGCATCAATGTTATGTATCGTAA-CA-AAGGGAATGTGTTCT-
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAA--GAATATGTT-TA
* * * * * * * * * *
138853 TGGTTCCCAATCATGAAAAGAATGGAGATT-GTTACGA-GAATCAACGCTTGCCTTATTTAAGGG
63 TGGTGCCTAATCCTGAAAAGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAG
**
138916 ATGAACTTTGATT-TA-AGGAAAGTAT-G-GCAAATG-
126 ACAAACTTTGATTCTATA--AAA--ATGGTGCAAA-GA
* * * * ** * * * * * * *
138949 ATA-CATTTCTAAGCAAAAGAAAATCATCAATATCCTTTA-CCTTAATGTGTAGAATGTGTTTAT
1 AAAGCTTTTCT-TGCGAAACCAAAGCGTCAATATCATGTATCC-TAATGAGAAGAATATGTTTAT
* * * * * *
139012 AGTGCCTAATCAC--AAAATGAATGAAGA-TA--ATTACTATAATCCTTGTTTGTCTCATTTGAG
64 GGTGCCTAATC-CTGAAAA-GAATGGAGATTAGTATGACTAT--T-CATGTTTGTCTTATTTAAG
* * * * **
139072 -GCACGAACTTAGACAT-TATAAAAATTAGTGGGAAG-
124 AG-ACAAACTTTGA-TTCTATAAAAA-TGGTGCAAAGA
* * * * * * *
139107 AAAGCCTTTCTTGC-AAACCCAAAGTGTCAATATCGTGAATCCTTAT--G-AGACTAAGTTTATG
1 AAAGCTTTTCTTGCGAAA-CCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* *
139168 GTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATCTAAGAGACAA
65 GTGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAA
*
139233 ACTTTGATTCTATCAAAAACGGTTG-AAAGA
130 ACTTTGATTCTAT-AAAAATGG-TGCAAAGA
* * * * ** * *
139263 AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATAAGGGGAATGTGTTTTTGG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* * * * * * * * * * *
139328 TTCCCAATCATGAAATGAATGGAGACT-GTTATGA-GAATCAATGCTTGCCTTATTTAAGGGATA
66 TGCCTAATCCTGAAAAGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAGACA
* * * *
139391 AA-TAATGATTTTATGGAAAATAGG-GCAAAGG
129 AACT-TTGATTCTAT-AAAAAT-GGTGCAAAGA
* * * * * * * * * * * * *
139422 AAA-CATTTCCATGCAGAAGA--AAATCATCAACACCATTTACCCTCAGGAGGAGAATGTGTTTG
1 AAAGC-TTTTCTTGC-GAA-ACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTA
* * * * * * **
139484 TCGTGCCTAATCAC--AAAATGATTGAAGA-TA--ATTACTATAATCCTTGTTTGTCTCATTTGT
63 TGGTGCCTAATC-CTGAAAA-GAATGGAGATTAGTATGACTAT--T-CATGTTTGTCTTATTTAA
* * *** **
139544 G-GCATAAACTTAGACAATATAAAAATTGGTGGGAAG-
123 GAG-ACAAACTTTGATTCTATAAAAA-TGGTGCAAAGA
** * * * * *
139580 AAAGCCGTTCTTGCGAACCCAAAGCGTCAATATCGTGAATCCTTAT--G-AGACTATGTTTATGG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
* *
139642 TGCCTAAATCCTGAAAAGAATGGGGATTAGTATGGCTACTT-ATGTTTGTCTTATTTAAGAGACA
66 TGCCT-AATCCTGAAAAGAATGGAGATTAGTATGACTA-TTCATGTTTGTCTTATTTAAGAGACA
139706 AACTTTGATTCTATCAAAAATGGTTG-AAAGA
129 AACTTTGATTCTAT-AAAAATGG-TGCAAAGA
* * * * *
139737 AAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTTCT-T
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGA-AGAATATGTT-TAT
* * * * * * * * *
139800 GGTTCCCAATCAC-GAAAAGAATGGAGATT-GTTACGA-GAATCAACGCTTGCCTTATTTAAGGG
64 GGTGCCTAATC-CTGAAAAGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAGAG
** * *
139862 ATGAACTTTGATTTTA-AGGAAAAT-ATGGCAAATG-
126 ACAAACTTTGATTCTATA--AAAATGGT-GCAAA-GA
* * * ** * * * * *
139896 AAA-CATTTCTAAGCAAAAGAAAATCATCAATATCCTTTA-CCTTAATGAGGAGAA-AGTGTTTA
1 AAAGCTTTTCT-TGCGAAACCAAAGCGTCAATATCATGTATCC-TAATGAGAAGAATA-TGTTTA
* * * * * * * *
139958 TAGTGCCTAATCAC--AAAATGAATGAAGATCATTACTGA-AATCCATGTTTGTCTCATTTGAG-
63 TGGTGCCTAATC-CTGAAAA-GAATGGAGATTAGTA-TGACTATTCATGTTTGTCTTATTTAAGA
* * * * * * **
140019 GCACGAACTTAGACAT-TACAACAATTAGTGGGAAG-
125 G-ACAAACTTTGA-TTCTATAA-AAATGGTGCAAAGA
* * * * * *
140054 AAAGCCTTTCTTGC-AAACCCAGAGCGTCAATATCGTGAATCCTTAT--G-AGACTATGTTTATG
1 AAAGCTTTTCTTGCGAAA-CCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATG
* * *
140115 GTGCCTAATCCTGAAAAAAATAGG-GATTTGTATGACTATTCACGTTTGTCTTATTTAAGAGACA
65 GTGCCTAATCCTGAAAAGAAT-GGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACA
140179 AACTTTGATTCTATCAAAAATGGTTG-AAAGA
129 AACTTTGATTCTAT-AAAAATGG-TGCAAAGA
* * * *
140210 AAAGCTTTTCTTGC-AACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTTCT-
1 AAAGCTTTTCTTGCGAA-ACCAAAGCGTCAATATCATGTATCCTAATGAGA-AGAATATGTT-TA
* * * * * * * *
140272 TGGTTTCC-AATCAC-GAAATGAATGGAGATT-GTTACGA-GAATCAACGCTTGCCTTATTTAAG
63 TGG-TGCCTAATC-CTGAAAAGAATGGAGATTAG-TATGACTATTC-ATGTTTGTCTTATTTAAG
* ** * *
140333 GGATGAGCTTTGATT-TA-AGGAAAAT-ATGGCAAATG-
124 AGACAAACTTTGATTCTATA--AAAATGGT-GCAAA-GA
* * * ** * * * * * **
140368 AAA-CATTTCTAAGCAAAAGAAAATCATCAATATCCTTTA-CCTTAATGAGGAGAACGTGTTTAT
1 AAAGCTTTTCT-TGCGAAACCAAAGCGTCAATATCATGTATCC-TAATGAGAAGAATATGTTTAT
* * * * * * *
140431 AGTGCCTAAT-C-GAAAAATGAATGAAGATCT-TTACTAGA--ATCCATGTTTATCTCATTTGAG
64 GGTGCCTAATCCTG-AAAA-GAATGGAGAT-TAGTA-T-GACTATTCATGTTTGTCTTATTTAAG
* * ** * **
140491 ACG-CGAACTTAGACACAATAAAAATTGGTGGGAAG-
124 A-GACAAACTTTGATTCTATAAAAA-TGGTGCAAAGA
* * * *
140526 AAAGCGTTTCTTGAGAAACCAAAGCTTCAATATCATGTATCCTTATGAGAA-AACTATGTTTATG
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAA-TATGTTTATG
* * * **
140590 GTGCCTAATCATGAAAAGAATGGGGATTAG-AGAGACTATTCACATTTGTCTTATTTAAGAGACA
65 GTGCCTAATCCTGAAAAGAATGGAGATTAGTA-TGACTATTCATGTTTGTCTTATTTAAGAGACA
* *
140654 ATCTTTGATTCTATCAAAAACGGTTG-AAAGA
129 AACTTTGATTCTAT-AAAAATGG-TGCAAAGA
* * *
140685 AAAGCTTTTCTTGCGACACCAAAGCGTTAATGTCATGTATC
1 AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATC
140726 GTGTGCAAGA
Statistics
Matches: 4827, Mismatches: 1618, Indels: 1072
0.64 0.22 0.14
Matches are distributed among these distances:
149 6 0.00
150 83 0.02
151 16 0.00
152 5 0.00
153 2 0.00
154 68 0.01
155 483 0.10
156 533 0.11
157 326 0.07
158 1107 0.23
159 1907 0.40
160 156 0.03
161 43 0.01
162 84 0.02
163 6 0.00
164 2 0.00
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (158 bp):
AAAGCTTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTTATGG
TGCCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAA
CTTTGATTCTATAAAAATGGTGCAAAGA
Found at i:137929 original size:21 final size:21
Alignment explanation
Indices: 137905--137946 Score: 84
Period size: 21 Copynumber: 2.0 Consensus size: 21
137895 CTAATAAAGG
137905 GAATGGAGACTGTTATGAAAA
1 GAATGGAGACTGTTATGAAAA
137926 GAATGGAGACTGTTATGAAAA
1 GAATGGAGACTGTTATGAAAA
137947 TCAACGCTTG
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 21 1.00
ACGTcount: A:0.43, C:0.05, G:0.29, T:0.24
Consensus pattern (21 bp):
GAATGGAGACTGTTATGAAAA
Found at i:145232 original size:9 final size:9
Alignment explanation
Indices: 145220--145280 Score: 56
Period size: 9 Copynumber: 7.1 Consensus size: 9
145210 CTCTCTCTTT
145220 TATCTCTCC
1 TATCTCTCC
145229 TATCTCTCC
1 TATCTCTCC
* *
145238 T-CCTAT-C
1 TATCTCTCC
*
145245 -ATCCCTCC
1 TATCTCTCC
*
145253 TATCTCTAC
1 TATCTCTCC
145262 TATCTCTCC
1 TATCTCTCC
*
145271 AATCTCTCC
1 TATCTCTCC
145280 T
1 T
145281 CCTTTCATCC
Statistics
Matches: 39, Mismatches: 10, Indels: 6
0.71 0.18 0.11
Matches are distributed among these distances:
7 3 0.08
8 4 0.10
9 32 0.82
ACGTcount: A:0.15, C:0.44, G:0.00, T:0.41
Consensus pattern (9 bp):
TATCTCTCC
Found at i:145238 original size:42 final size:42
Alignment explanation
Indices: 145192--145310 Score: 168
Period size: 42 Copynumber: 2.8 Consensus size: 42
145182 TTCTTCTCTC
* * *
145192 CTCCTCCTGTCATCCCTCCTCTCTCTTTTATCTCTCCTATCT
1 CTCCTCCTATCATCCCTCCTATCTCTTTTATCTCTCCAATCT
**
145234 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCAATCT
1 CTCCTCCTATCATCCCTCCTATCTCTTTTATCTCTCCAATCT
*
145276 CTCCTCCTTTCATCCCTCCTATCTCTTCTT-TCTCT
1 CTCCTCCTATCATCCCTCCTATCTCTT-TTATCTCT
145311 TTGAAGGCTA
Statistics
Matches: 68, Mismatches: 8, Indels: 2
0.87 0.10 0.03
Matches are distributed among these distances:
42 67 0.99
43 1 0.01
ACGTcount: A:0.10, C:0.45, G:0.01, T:0.44
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTATCTCTTTTATCTCTCCAATCT
Found at i:145242 original size:12 final size:12
Alignment explanation
Indices: 145225--145259 Score: 54
Period size: 12 Copynumber: 2.9 Consensus size: 12
145215 TCTTTTATCT
145225 CTCCTATCTCTC
1 CTCCTATCTCTC
145237 CTCCTATCATC-C
1 CTCCTATC-TCTC
145249 CTCCTATCTCT
1 CTCCTATCTCT
145260 ACTATCTCTC
Statistics
Matches: 21, Mismatches: 0, Indels: 4
0.84 0.00 0.16
Matches are distributed among these distances:
11 2 0.10
12 17 0.81
13 2 0.10
ACGTcount: A:0.11, C:0.49, G:0.00, T:0.40
Consensus pattern (12 bp):
CTCCTATCTCTC
Found at i:148226 original size:476 final size:476
Alignment explanation
Indices: 146916--152765 Score: 7993
Period size: 476 Copynumber: 12.4 Consensus size: 476
146906 GTTTTCATCA
* * * * *
146916 GAATGTGTTCTTGGTTCCCAACCATGAAAAGAATTGAGACTAG-TACGAGAATCAATGCTTGCCT
1 GAATGTGTTTTTGGTTCCCAACTATGAAAAGAATGGAGACT-GTTATGAGAATCAACGCTTGCCT
* ** * * *
146980 TATTTAACGGATGAACTTTGATTTTAAGAAAAATAGGGCAAAGGAAACATTTCCATGCAAAAAAA
65 TATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAA
* * * * * *
147045 AAACATCAATATCATTTACCCTCATGAGGAGAATGCGTTTATCA-TGCCTAATCACAAAATGAAT
130 AATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTAT-AGAGCATAATCACAAAATGAAT
* *** * * * * * * **
147109 GAAGCTAAATATTATAAACCTTGTTTGTCTCATTTAAGGCATGAACTTAGACACCATAAAAATTG
194 GAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTG
* * *
147174 GTGGGAAGAAAGCCTGTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAC
259 GTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTAT
* *
147239 GTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACATTTGTCTTATTAAA
324 GTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAA
* *
147304 GAGACAAGCTTTGATTCTATCAAAAACAGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
389 GAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
*
147369 AATGTCATGCATCCTAATGAAGG
454 AATGTCATGTATCCTAATGAAGG
* * * *
147392 GAATGTGTTTTTGGTTCACAA-TCCTGAAAAGAATGGAGACTATTACGAGAATCAACGCTTGCCT
1 GAATGTGTTTTTGGTTCCCAACT-ATGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCCT
* *
147456 TATTTAA-GGATGAATAATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAA
65 TATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAA
* * * * * *
147520 AATCATCAATACCACTTACCC-AATGCGGAGAACGTGTTTAGAGTGCCTAATCACAAAATGAATG
130 AATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAATG
* *
147584 AAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCGCGAACATAGACATTATAAAAATTGG
195 AAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGG
* * * * * *
147649 TGGGAAGAAAGCCTTTCTTACGAAACCAAAGAGTCAATATTGTGTATCGTTATGAGAAAACAATG
260 TGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATG
* * * *
147714 TTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGTAAGACTATTCACATTTATCTTATTAAAG
325 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAG
* **
147779 AAATGAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
390 AGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
* * *
147844 ATGTCATGCATCCTAAGGAAGA
455 ATGTCATGTATCCTAATGAAGG
* **
147866 GAATGTGTTTTTGGTTACCAACTATGAAAAGAATGGAGACTGTTACAAGAATCAACGCTTGCCTT
1 GAATGTGTTTTTGGTTCCCAACTATGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCCTT
147931 ATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAA
66 ATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAA
* * * * *
147996 ATCATCAATACCATTTACCCTAATGAGGAGAATTTGTCTATAAAGTATAATCAAAAAATGAATGA
131 ATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAATGA
* * *
148061 AGATCTTTACTAGAATCCATGTTTATCTCATTTGAGGCGCGAACTTAGACATTATAAAAATTGAT
196 AGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGT
* * *
148126 GGGAAGAAAGCCATTCTTGTGAAACCAAAGTGTCAATATCGTGTATCCTTATGAGAAGACTATGT
261 GGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGT
* *
148191 TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACATTTGTCTTATTAAAAA
326 TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGA
* *
148256 GACAAACTTTGATTCTATCAGAAACGGTTGAAAGAAAAACTTTTCTTGCGACACCAAAGCATCAA
391 GACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAA
* *
148321 TGTCATATATCCTAATGATGG
456 TGTCATGTATCCTAATGAAGG
* * *
148342 GAATGCGTTTTTGGTTCCCAA-TCATGAAAAGAATGGAGACTATTATGAGAATCAATGCTTGCCT
1 GAATGTGTTTTTGGTTCCCAACT-ATGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCCT
* * *
148406 TATTTAAGGGATGAATAATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAAGAA
65 TATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAA
* * * * *
148471 AATCATCAATACCAATTACCCTCATGAGGAGAATGTGTTTGTCATG-TC-TAATCAAAAAATGAA
130 AATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTAT-A-GAGCATAATCACAAAATGAA
** * * * * *
148534 TGAAGATAATTACTATAATCCTTGTTTGTCTCATTTGAGGCACAAACTTAGAAAATATAAAAATT
193 TGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATT
* * * * *
148599 GGTGGGAAGAAAGCCTTTCTTGCGAACCCCAAGCGTCAATATTGTGAATCATTAT--G-AGACTA
258 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTA
* *
148661 TGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGCATGACTATTCACGTTTGTTTTATTAA
323 TGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAA
148726 AGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
388 AGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
* *
148791 CATTGTCATGTATCCTAATGACGG
453 CAATGTCATGTATCCTAATGAAGG
* * *
148815 GAATGTGTTTTTGGTTCTCAACTATGAAAAGAATGGAAACTGTTATGAGAATCAACGCTTACCTT
1 GAATGTGTTTTTGGTTCCCAACTATGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCCTT
* * *
148880 ATTTAAGGGATGAACAATGATTTTATGAAAAATAGGGCAAAGGAAACATTTCCATGCAAAAAAAA
66 ATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGC-AAAAGAA
** * *
148945 AATCATCAATACCATTTACCCTAAAAAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
130 AATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAATG
* *
149010 AAGATCTTTTTACTAGAATCCATGTTTCTCTCATTCGAGGCACGAACTTAGACATTATAAAAATT
195 AAGATC--TTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATT
* * ** * * *
149075 GGTGGGAAGAAAGCCTTTCTTGCAAAACCAAAGTGTCTGTATTGTGTATCCTAATGAGAAAACTA
258 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTA
* * *
149140 TGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGTAAGACTATTCACATTTGTCTTATTAA
323 TGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAA
** * *
149205 AGAGATGAACTTTGATTCTATCAATAACGGTTGAAAGAAAAGCTTTTTTTGCGACACCAAAGCAT
388 AGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
*
149270 CAATGTCATGTATCCAAATGAAGG
453 CAATGTCATGTATCCTAATGAAGG
* * *
149294 GAATGTGTTTTTGGTTCCCAACCATGAAAAAGAATGGAGACCGTTACGAGAATCAACGCTTGCCT
1 GAATGTGTTTTTGGTTCCCAACTATG-AAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCCT
* ** *
149359 TATTTAAGGGATGAACAATGATTTTAGCGAAAATACCGCAAAGGAAACATTTCCATGCAAAAGCA
65 TATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAA
* * * *
149424 AATCTTCAATACCATTTACCCAAATAAGGAGAAAGTGTTTATAGAGCATAATCACAAAATGAATG
130 AATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAATG
* *
149489 AAGATCTTTACTAGAATCCATGTTTGTCTCATTTAAGGCGCGAACTTAGACATTATAAAAATT-G
195 AAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGG
*
149553 TGGGGAAGAAAGCCTTTCTTGCGACACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTAT
260 T-GGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTAT
* *
149618 GTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGCCTTATTAAA
324 GTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAA
* *
149683 AAGACAAACTTTGATTCTATCAGAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
389 GAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
149748 AATGTCATGTATCCTAATGAAGG
454 AATGTCATGTATCCTAATGAAGG
* * *
149771 GAATGCGTTTTTGGTTCCCAA-TCAAGAAAAAGAATGGAGACTATTATGAGAATCAACGCTTGCC
1 GAATGTGTTTTTGGTTCCCAACT-ATG-AAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCC
* * * *
149835 TTATTTAAGGGATGAATAATGATTTTAGGGAGAATAGGGCAAAGGAAACATTTCCAAGCAAAAGC
64 TTATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGA
149900 AAATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAAT
129 AAATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAAT
* * ** *
149965 GAAGATCTTTACCAAAATCCATGTTTGTCTCATTTGAGGCGTGAACTTGGACATTAT--AAA---
194 GAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTG
* * *
150025 -----AAGAATGCCTTTCTTGCGAAACCAAAGTGTCAATATCGTGTATCCTGATGAGAAGACTAT
259 GTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTAT
*
150085 GTTTATGGTGCCTAATCCTGAAAAGAATGCGGATTAGTATGACTATTCACGTTTGTCTTATTAAA
324 GTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAA
* * *
150150 GAGACAAACTTTGATTCTATCAGAAATGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAACATC
389 GAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATC
*
150215 AATGTCATGTTTCCTAATGAAGG
454 AATGTCATGTATCCTAATGAAGG
* * * * *
150238 AAATGTGTTCTTGGTTCCCAA-TCACTGAAAAGAATGGAGATTGTTGTGAGAATCAATGCTTGCC
1 GAATGTGTTTTTGGTTCCCAACT-A-TGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCC
** * * * * *
150302 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATATGGCAAATGAAACATTTCTAAGCAAAA-A
64 TTATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGA
* * * * *
150366 AAAACAACAATATCC-TTTACCTTAATGAGGAGAATGTGTTTATAGCA-CCTAGTCACAAAATGA
129 AAATCATCAATA-CCATTTACCCTAATGAGGAGAATGTGTTTATAG-AGCATAATCACAAAATGA
* * *
150429 ATGAGGATCATTACTAGAATCCATGTTTGCCTCATTTGAGGCACGAACTTAGACATTATAAAAAT
192 ATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAAT
* * * *
150494 TGGTGGGAAGAAAGCCTTTCCTGCGAAACCAAAGTGTCAATATTGTGTATCCTGATGAGAAGACT
257 TGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACT
* * *
150559 ATGTTTATGGTGCCAAATCCTGACAAGAATGGGGATTAGCATGACTATTCACGTTTGTCTTATTA
322 ATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTA
* * *
150624 AAGAGACAAACTTTGATTCTATTAGAAATGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCA
387 AAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCA
** *
150689 AGAATGTCATGTTTCCTAATGAAGG
452 TCAATGTCATGTATCCTAATGAAGG
* * * * * * *
150714 GAATGTGTTCTTGGTTCCCAA-TCACGACAAGAATGGAGATTGTTGTGAGAATCAATGCTTGTCT
1 GAATGTGTTTTTGGTTCCCAACT-ATGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCCT
** * * * * * *
150778 TATTTAAGGGATGAACTTTGATTTTAAGGAAAATATGGCAAATGAAACATTTCTAAGCAAAACAA
65 TATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAA
* * *
150843 AA-CATCAATATCC-TTTACCTTAATGAGGAGAATGTGTTTATAGCA-CCTAGTCACAAAATGAA
130 AATCATCAATA-CCATTTACCCTAATGAGGAGAATGTGTTTATAG-AGCATAATCACAAAATGAA
* **
150905 TGAGGATGATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATT
193 TGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATT
* * * * *
150970 GGCGGGAAGAAAGCCTTTCTTGCCAAATCAAAGCGTCAATATCATGTATCCTTATGAGAAAACTA
258 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTA
* ** *
151035 TGTTTATGGTG-CTAATCATGAAAAGAATGGGGATTAGTAACACTATTCACATTTGTCTTATTAA
323 TGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAA
* * *
151099 AGAGACGAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCCTACGACACCAAAGCAT
388 AGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
*
151164 CAATGTCATGCATCCTAATGAAGG
453 CAATGTCATGTATCCTAATGAAGG
* *
151188 GAATGTGTTTTTGGTTCCCAACCATGAAAAGAATGGAGACTATTA-GAGAATCAACGCTTGCCTT
1 GAATGTGTTTTTGGTTCCCAACTATGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCCTT
* * *
151252 ATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAGAGGAAACATTTCAATGCAAAAGCAA
66 ATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAA
*
151317 ATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAGCATAGTCACAAAATGAATGA
131 ATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAATGA
* *
151382 AGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCGCGAACTTGGACATTAT--AAA-----
196 AGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGT
* * * *
151440 ---CAGAATGCCTTTCTTGCGAAACCAAAGTGTTAATATCGTGTATCCTTATGAGAAGACTATGT
261 GGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGT
* * *
151502 TTATGGTGCCTAATCCTGAAAAAAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAA-A
326 TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGA
** *
151566 GTTAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGTGACA-C-AAGCATCAA
391 GACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAA
151629 TGTCATGTATCCTAATGAAGG
456 TGTCATGTATCCTAATGAAGG
* ** * * * *
151650 GAATGTGTTCTTT-ATTCATAATCT-CGAAAAGAATGGAGATTGTTACGAGAATCAGCGCTTGCC
1 GAATGTGTT-TTTGGTTCCCAA-CTATGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCC
* * ** * * * * *
151713 TAATTTTAGGGATGAACTTTGATTTTAAGGAAAATATGGCAAATGAAACATTTCTAAGCAAAA-A
64 TTATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGA
* * * * * *
151777 AAA-CATCAATATCC-TTTACCTTAATAAGGAGAATCTGTTTATAGTGCCTAGTCACAAAATGAA
129 AAATCATCAATA-CCATTTACCCTAATGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAA
* * *
151840 TGAGGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACAAACTTAGACATTATAAAAATT
193 TGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATT
* * * *
151905 GGTGGGAAAAAAGCCTTTCTTGCGAAACCAGAGCGTCAATATCATGTATCTTTATGAGAAGACTA
258 GGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTA
* * *
151970 TGTTTATGGTGCCTAATCTTGAAAAGAAAGGGGATTAGCATGACTATTCACGTTTGTCTTATTAA
323 TGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATT-A
* * * * *
152035 AAGAGAGAAACTTTGATTCTATCAAAAATGGTTGAAAG-AAAGCTTTTCTTACGACACCCAAGCG
387 AAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCA
*
152099 TCAATGTCATATATCCTAATGAAGG
452 TCAATGTCATGTATCCTAATGAAGG
* ** *
152124 GAATGTGTTTTTGGTTCCCAACCATGAAAAGAATGGAGACAATTA-GAGAATCAACGCTTACCTT
1 GAATGTGTTTTTGGTTCCCAACTATGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCCTT
* * *
152188 A--TAAGGGATGAACAATGATTTTAGGGACAATAGGGCAGAGGAAACATTTCCATGCAAAAGCAA
66 ATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAA
* * * * * *
152251 ATCGTCAATACCATTTACCCGAATGAGCAGAATGTATTTATAGAACATAATCATAAAATGAATGA
131 ATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAATGA
*
152316 AGACCTTTACTAGAATCCATGTTTGTCTCATTTGAGG-AGCGAACTTAGACATTATAAAAATTGG
196 AGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCA-CGAACTTAGACATTATAAAAATTGG
* *
152380 TGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTATG
260 TGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATG
* * * * *
152445 TTTATGGCGCCTAATCCTGAAAAGAAAGGGGATTATTATGACTATTCATGTTTGTCTTATTTAAG
325 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAG
* * * * *
152510 AGACAAGCATTGATTCCATCAAAAACGATTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCA
390 AGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCA
152575 ATGTCATGTATCCTAATG-AGTG
455 ATGTCATGTATCCTAATGAAG-G
** * * *
152597 GAATGTGTTTTTGGTTTTCAATTATGAAAAGAATGGAGACTGTTTTAAGAATCAACGCTTGCCTT
1 GAATGTGTTTTTGGTTCCCAACTATGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCCTT
* * *
152662 ATTTAAGGGATGAATAAT-ATTTTTATGGAAAATAGGCCAAAGGAAACATTTCCATGCAAAAGAA
66 ATTTAAGGGATGAACAATGA-TTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAA
* *
152726 AATCATCAATACCATGTATCCTAATGAAGG-GAATGTGTTT
130 AATCATCAATACCATTTACCCTAATG-AGGAGAATGTGTTT
152766 TTGGTTCCCA
Statistics
Matches: 4790, Mismatches: 513, Indels: 142
0.88 0.09 0.03
Matches are distributed among these distances:
461 105 0.02
462 66 0.01
463 77 0.02
464 110 0.02
465 47 0.01
466 104 0.02
467 314 0.07
468 4 0.00
471 157 0.03
472 62 0.01
473 699 0.15
474 761 0.16
475 438 0.09
476 1034 0.22
477 483 0.10
478 1 0.00
479 241 0.05
480 87 0.02
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (476 bp):
GAATGTGTTTTTGGTTCCCAACTATGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCCTT
ATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAA
ATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAATGA
AGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGT
GGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGT
TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGA
GACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAA
TGTCATGTATCCTAATGAAGG
Found at i:149303 original size:159 final size:158
Alignment explanation
Indices: 147190--154690 Score: 906
Period size: 159 Copynumber: 47.5 Consensus size: 158
147180 AGAAAGCCTG
* * ** * * **
147190 TCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATG-AGAAGACTACGTTTATGGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * *
147254 TCATGAAAAGAATGGGGATTAGTATGACTATTCACATTTGTCTTATTAAAGAGAC-AAGCTTTGA
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAA-CTTTGA
*
147318 TTCTATCAAAAACAGTTGAAAGAAAAGCTTT
128 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * *
147349 TCTTGCGACACCAAAGCATCAATGTCATGCATCCTAATGAAGGGAATGTGTTTTTGGTTCAC-AA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGGTGC-CTAA
* * * * * * * * * *
147413 TCCTGAAAAGAATGGAGACTATTACGAGAATCAACGCTTGCCTTATTTAAG-GATGAA-TAATGA
65 TCATGAAAAGAATGGAGATTAGTAAGATATTC-ACGTTTGCCTTATTAAAGAGACGAACT-TTGA
* * *
147476 TTTTATGGAAAATA-GG--GCAAAGGAAA-CATTT
128 TTCTAT-CAAAA-ACGGTTG-AAAGAAAAGC-TTT
* * * * ** * * * * *
147507 CCATGCAAAAGAAAATCATCAATACCACT-TA-CCCAATG-CGGAGAACGTGTTTA-GAGTGCCT
1 TCTTGCGACACCAAAGCATCAATATCA-TGTATCCAAATGAAGG-GAATGTGTTTATG-GTGCCT
* * * * * * * ** *
147568 AATCA-CAAAATGAATGAAGATCT-TTACTAGA-ATCCATGTTTGTCTCATTTGAG-GCGCGAAC
63 AATCATGAAAA-GAATGGAGAT-TAGTA--AGATATTCACGTTTGCCTTATTAAAGAG-ACGAAC
* * * * * * *
147629 ATAGACAT-TAT-AAAAATTGGTGGGAAG-AAAGCCTT
123 TTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTT
* * ** *** ** **
147664 TCTTACGAAACCAAAG-AGTCAATATTGTGTATCGTTATG-AGAAAACAATGTTTATGGTGCCTA
1 TCTTGCGACACCAAAGCA-TCAATATCATGTATCCAAATGAAGGGAA-TGTGTTTATGGTGCCTA
* * ** * *
147727 ATCATGAAAAGAATGGGGATTAGTAAGACTATTCACATTTATCTTATTAAAGAAATGAACTTTGA
64 ATCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAACTTTGA
147792 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
128 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * * * *
147823 TCTTGCGACACCAAAGCATCAATGTCATGCATCCTAAGGAAGAGAATGTGTTTTTGGTTACC-AA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGG-TGCCTAA
* * * * * **
147887 -CTATGAAAAGAATGGAGACTGTTA-CAAGA-A-TCAACGCTTGCCTTATTTAAGGGATGAACAA
65 TC-ATGAAAAGAATGGAGA---TTAGTAAGATATTC-ACGTTTGCCTTATTAAAGAGACGAACTT
* ** *
147948 TGATTTTAGGGAAAATA-GG--GCAAAGGAAA-CATTT
125 TGATTCTA-TCAAAA-ACGGTTG-AAAGAAAAGC-TTT
* * * * ** * * * * * * * *** **
147982 CCATGCAAAAGAAAATCATCAATACCATTTACCCTAATG-AGGAGAATTTGTCTATAAAGTATAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGG-GAATGTGTTTATGGTGCCTAA
* * * * * ** * ** *
148046 TCA-AAAAATGAATGAAGATCT-TTACTAGA-ATCCATGTTTATCTCATTTGAG-GCGCGAACTT
65 TCATGAAAA-GAATGGAGAT-TAGTA--AGATATTCACGTTTGCCTTATTAAAGAG-ACGAACTT
* * * * * * **
148107 AGACAT-TAT-AAAAATTGATGGGAAG-AAAGCCAT
125 TGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTT
* * ** * ** * * *
148140 TCTTGTGAAACCAAAGTGTCAATATCGTGTATCCTTATG-AGAAGACTATGTTTATGGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * * * * *
148204 TCCTGAAAAGAATGGGGATTAGTATGACTATTCACATTTGTCTTATTAAAAAGACAAACTTTGAT
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAACTTTGAT
* *
148269 TCTATCAGAAACGGTTGAAAGAAAAACTTT
129 TCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * * * * *
148299 TCTTGCGACACCAAAGCATCAATGTCATATATCCTAATGATGGGAATGCGTTTTTGGTTCCCAAT
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGGTGCCTAAT
* * * * * * * * * * *
148364 CATGAAAAGAATGGAGACTATTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAA-TAATGAT
66 CATGAAAAGAATGGAGATTAGTAAGATATTC-ACGTTTGCCTTATTAAAGAGACGAACT-TTGAT
* * *
148428 TTTATGGAAAATA-GG--GCAAAGGAAA-CATTT
129 TCTAT-CAAAA-ACGGTTG-AAAGAAAAGC-TTT
* ** * * ** * * * ** * ** *
148458 CCAAGCAAAAGAAAATCATCAATACCAAT-TACCCTCATG-AGGAGAATGTGTTTGTCATGTCTA
1 TCTTGCGACACCAAAGCATCAATATC-ATGTATCCAAATGAAGG-GAATGTGTTTATGGTGCCTA
* * * * ** * * * ** *
148521 ATCA-AAAAATGAATGAAGATAATTACTATAATC-CTTGTTTGTCTCATTTGAG-GCACAAACTT
64 ATCATGAAAA-GAATGGAGATTAGTAAGATATTCAC--GTTTGCCTTATTAAAGAG-ACGAACTT
* *** * * * *
148583 AGAAAATAT-AAAAATTGGTGGGAAG-AAAGCCTT
125 TGATTCTATCAAAAA-CGGTTGAAAGAAAAGCTTT
* * ** * * * *
148616 TCTTGCGA-ACCCCAAGCGTCAATATTGTGAAT-CATTATG-A--GACTATGTTTATGGTGCCTA
1 TCTTGCGACA-CCAAAGCATCAATATCATGTATCCA-AATGAAGGGAATGTGTTTATGGTGCCTA
* * * * ** *
148676 ATCCTGAAAAGAATGGGGATTAGCATGACTATTCACGTTTGTTTTATTAAAGAGACAAACTTTGA
64 ATCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAACTTTGA
148741 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
128 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * * *
148772 TCTTGCGACACCAAAGCATCATTGTCATGTATCCTAATGACGGGAATGTGTTTTTGGT-TCTCAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGGTGCCT-AA
* * * * * * * * * * **
148836 -CTATGAAAAGAATGGAAACT-GTTATGAGAATCAACGCTTACCTTATTTAAGGGATGAACAATG
65 TC-ATGAAAAGAATGGAGATTAG-TAAGATATTC-ACGTTTGCCTTATTAAAGAGACGAACTTTG
* * * *
148899 ATTTTATGAAAAATAGG--GCAAAGGAAA-CATTT
127 ATTCTATCAAAAA-CGGTTG-AAAGAAAAGC-TTT
* * * * ** * * * * *
148931 CCATGCAAAAAAAAAATCATCAATACCATTTACCCTAAA--AAGGAGAATGTGTTTATAGTGCCT
1 TCTTGC-GACACCAAAGCATCAATATCATGTATCC-AAATGAAGG-GAATGTGTTTATGGTGCCT
* * ** * * * **
148994 AATCA-CAAAATGAATGAAGATCTTTTTACTAGA-ATCCATGTTT-CTCTCATTCGAG-GCACGA
63 AATCATGAAAA-GAATGGAGA--TTAGTA--AGATATTCACGTTTGC-CTTATTAAAGAG-ACGA
* * * * * *
149055 ACTTAGACAT-TAT-AAAAATTGGTGGGAAG-AAAGCCTT
121 ACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTT
* * ** ** ** * ** *
149092 TCTTGCAAAACCAAAGTGTCTGTATTGTGTATCCTAATG-AGAAAACTATGTTTATGGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAA-TGTGTTTATGGTGCCTAA
* * * *
149156 TCATGAAAAGAATGGGGATTAGTAAGACTATTCACATTTGTCTTATTAAAGAGATGAACTTTGAT
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAACTTTGAT
*
149221 TCTATCAATAACGGTTGAAAGAAAAGCTTT
129 TCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * * *
149251 TTTTGCGACACCAAAGCATCAATGTCATGTATCCAAATGAAGGGAATGTGTTTTTGGTTCCCAAC
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGGTGCCTAAT
** * * * * * * * **
149316 CATGAAAAAGAATGGAGA-CCGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGA
66 CATG-AAAAGAATGGAGATTAG-TAAGATATTC-ACGTTTGCCTTATTAAAGAGACGAACTTTGA
* * * * *
149380 TTTTAGCGAAAATACCG--CAAAGGAAA-CATTT
128 TTCTATC-AAAA-ACGGTTGAAAGAAAAGC-TTT
* * * * * * * * * * * * * *
149411 CCATGCAAAAGCAAATCTTCAATACCATTTACCCAAAT-AAGGAGAAAGTGTTTATAGAGCATAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGG-GAATGTGTTTATGGTGCCTAA
* * * * * * * * *
149475 TCA-CAAAATGAATGAAGATCT-TTACTAGA-ATCCATGTTTGTCTCATTTAAG-GCGCGAACTT
65 TCATGAAAA-GAATGGAGAT-TAGTA--AGATATTCACGTTTGCCTTATTAAAGAG-ACGAACTT
* * ** * * *
149536 AGACAT-TAT-AAAAATTGTGGGGAAG-AAAGCCTT
125 TGA-TTCTATCAAAAACGGT-TGAAAGAAAAGCTTT
* * ** * * *
149569 TCTTGCGACACCAAAGCGTCAATATCGTGTATCCTTATG-AGAAGACTATGTTTATGGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * *
149633 TCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGCCTTATTAAAAAGACAAACTTTGAT
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAACTTTGAT
*
149698 TCTATCAGAAACGGTTGAAAGAAAAGCTTT
129 TCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * * *
149728 TCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGCGTTTTTGGTTCCCAAT
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGGTGCCTAAT
* * * * * * * * * * *
149793 CAAGAAAAAGAATGGAGACTATTATGAGAATCAACGCTTGCCTTATTTAAGGGATGAA-TAATGA
66 CATG-AAAAGAATGGAGATTAGTAAGATATTC-ACGTTTGCCTTATTAAAGAGACGAACT-TTGA
* ** * *
149857 TTTTAGGGAGAATA-GG--GCAAAGGAAA-CATTT
128 TTCTA-TCA-AAAACGGTTG-AAAGAAAAGC-TTT
* ** * * * * * * * * * * *
149888 CCAAGCAAAAGCAAATCATCAATACCATTTACCCTAATG-AGGAGAATGTGTTTATAGAGCATAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGG-GAATGTGTTTATGGTGCCTAA
* * * * * * * * * *
149952 TCA-CAAAATGAATGAAGATCT-TTACCA-AAATCCATGTTTGTCTCATT--TGAGGCGTGAACT
65 TCATGAAAA-GAATGGAGAT-TAGTA--AGATATTCACGTTTGCCTTATTAAAGAGAC--GAACT
* * * * *
150012 TGGA--C-AT-TATAA------AAAG-AATGCCTT
124 TTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* ** * ** * * *
150036 TCTTGCGAAACCAAAGTGTCAATATCGTGTATCCTGATG-AGAAGACTATGTTTATGGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * *
150100 TCCTGAAAAGAATGCG-GATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGA
65 TCATGAAAAGAATG-GAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAACTTTGA
* *
150164 TTCTATCAGAAATGGTTGAAAGAAAAGCTTT
128 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * * * *
150195 TCTTGCGACACCAAAACATCAATGTCATGTTTCCTAATGAAGGAAATGTGTTCT-TGGTTCCCAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTT-TATGGTGCCTAA
* * * * * * *
150259 TCACTGAAAAGAATGGAGATTGTTGTGAGA-A-TCAATGCTTGCCTTATTTAAGGGATGAACTTT
65 TCA-TGAAAAGAATGGAGA-T-TAGTAAGATATTC-ACGTTTGCCTTATTAAAGAGACGAACTTT
* ** * * *
150322 GATTTTAAGGAAAATATGG--CAAATG-AAA-CATT
126 GATTCT-ATCAAAA-ACGGTTGAAA-GAAAAGCTTT
* * ** * * * * * * **
150354 TCTAAGC-AAAAAAAAACAACAATATCCTTTA-CCTTAATG-AGGAGAATGTGTTTATAGCACCT
1 TCT-TGCGACACCAAAGCATCAATATCATGTATCC-AAATGAAGG-GAATGTGTTTATGGTGCCT
* * * * * * * **
150416 AGTCA-CAAAATGAAT-GAGGATCATTACTAGA-ATCCATGTTTGCCTCATTTGAG-GCACGAAC
63 AATCATGAAAA-GAATGGA-GATTAGTA--AGATATTCACGTTTGCCTTATTAAAGAG-ACGAAC
* * * * * *
150477 TTAGACAT-TAT-AAAAATTGGTGGGAAG-AAAGCCTT
123 TTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTT
* * ** ** ** * * * *
150512 TCCTGCGAAACCAAAGTGTCAATATTGTGTATCCTGATG-AGAAGACTATGTTTATGGTGCCAAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * * * * *
150576 TCCTGACAAGAATGGGGATTAGCATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGAT
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAACTTTGAT
* * *
150641 TCTATTAGAAATGGTTGAAAGAAAAGCTTT
129 TCTATCAAAAACGGTTGAAAGAAAAGCTTT
** * * * * *
150671 TCTTGCGACACCAAAGCAAGAATGTCATGTTTCCTAATGAAGGGAATGTGTTCT-TGGTTCCCAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTT-TATGGTGCCTAA
* * * * * * * * * *
150735 TCACGACAAGAATGGAGATTGTTGTGAGA-A-TCAATGCTTGTCTTATTTAAGGGATGAACTTTG
65 TCATGAAAAGAATGGAGA-T-TAGTAAGATATTC-ACGTTTGCCTTATTAAAGAGACGAACTTTG
* ** * * *
150798 ATTTTAAGGAAAATATGG--CAAATG-AAA-CATT
127 ATTCT-ATCAAAA-ACGGTTGAAA-GAAAAGCTTT
* * * * * * * * **
150829 TCTAAGC-AAAACAAAACATCAATATCCTTTA-CCTTAATG-AGGAGAATGTGTTTATAGCACCT
1 TCT-TGCGACACCAAAGCATCAATATCATGTATCC-AAATGAAGG-GAATGTGTTTATGGTGCCT
* * * * * * * **
150891 AGTCA-CAAAATGAATGAGGATGATTACT-AGA-ATCCATGTTTGTCTCATTTGAG-GCACGAAC
63 AATCATGAAAA-GAAT--GGA-GATTAGTAAGATATTCACGTTTGCCTTATTAAAGAG-ACGAAC
* * * ** * *
150952 TTAGACAT-TAT-AAAAATTGGCGGGAAG-AAAGCCTT
123 TTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTT
* * * * ** ** *
150987 TCTTGCCAAATCAAAGCGTCAATATCATGTATCCTTATG-AGAAAACTATGTTTATGGTG-CTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAA-TGTGTTTATGGTGCCTAA
* * * *
151050 TCATGAAAAGAATGGGGATTAGTAACACTATTCACATTTGTCTTATTAAAGAGACGAACTTTGAT
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAACTTTGAT
151115 TCTATCAAAAACGGTTGAAAGAAAAGCTTT
129 TCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * * * * * *
151145 TCCTACGACACCAAAGCATCAATGTCATGCATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAAC
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGGTGCCTAAT
* * * * * * **
151210 CATGAAAAGAATGGAGACTATTAGAGA-A-TCAACGCTTGCCTTATTTAAGGGATGAACAATGAT
66 CATGAAAAGAATGGAGATTAGTA-AGATATTC-ACGTTTGCCTTATTAAAGAGACGAACTTTGAT
* ** * * *
151273 TTTAGGGAAAATA-GG--GCAGAGGAAA-CATT
129 TCTA-TCAAAA-ACGGTTG-AAAGAAAAGCTTT
* * * * * * * * * * * *
151302 TCAATGCAAAAGCAAATCATCAATACCATTTACCCTAATG-AGGAGAATGTGTTTATAGAGCATA
1 TC-TTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGG-GAATGTGTTTATGGTGCCTA
* * * * * * * * ** *
151366 GTCA-CAAAATGAATGAAGATCT-TTACTAGA-ATCCATGTTTGTCTCATTTGAG-GCGCGAACT
64 ATCATGAAAA-GAATGGAGAT-TAGTA--AGATATTCACGTTTGCCTTATTAAAGAG-ACGAACT
* * * * *
151427 TGGA--C-ATTATAAAC-------AG-AATGCCTT
124 TTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* ** * * ** * * *
151451 TCTTGCGAAACCAAAGTGTTAATATCGTGTATCCTTATG-AGAAGACTATGTTTATGGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * * * * **
151515 TCCTGAAAAAAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAAGTTA--AACTTTGA
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTA-TTAAAGAGACGAACTTTGA
151578 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
128 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * ** * *
151609 TCTTGTGACA-C-AAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCT-TTATTCATAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTT-TATGGTGCCTAA
* * * * * ** * *
151671 TC-TCGAAAAGAATGGAGATT-GTTACGAGAATCAGCGCTTGCCTAATTTTAGGGATGAACTTTG
65 TCAT-GAAAAGAATGGAGATTAG-TAAGATATTCA-CGTTTGCCTTATTAAAGAGACGAACTTTG
* ** * * *
151734 ATTTTAAGGAAAATATGG--CAAATG-AAA-CATT
127 ATTCT-ATCAAAA-ACGGTTGAAA-GAAAAGCTTT
* ** * * * * * *
151765 TCTAAGC-A-AAAAAAACATCAATATCCTTTA-CCTTAAT-AAGGAGAATCTGTTTATAGTGCCT
1 TCT-TGCGACACCAAAGCATCAATATCATGTATCC-AAATGAAGG-GAATGTGTTTATGGTGCCT
* * * * * * * * ** *
151826 AGTCA-CAAAATGAAT-GAGGATCATTACTAGA-ATCCATGTTTGTCTCATTTGAG-GCACAAAC
63 AATCATGAAAA-GAATGGA-GATTAGTA--AGATATTCACGTTTGCCTTATTAAAGAG-ACGAAC
* * * * * *
151887 TTAGACAT-TAT-AAAAATTGGTGGGAA-AAAAGCCTT
123 TTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTT
* * * *** * * *
151922 TCTTGCGAAACCAGAGCGTCAATATCATGTATCTTTATG-AGAAGACTATGTTTATGGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * * * *
151986 TCTTGAAAAGAAAGGGGATTAGCATGACTATTCACGTTTGTCTTATTAAAAGAGA-GAAACTTTG
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATT-AAAGAGACG-AACTTTG
*
152050 ATTCTATCAAAAATGGTTGAAAG-AAAGCTTT
127 ATTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * * * * * * *
152081 TCTTACGACACCCAAGCGTCAATGTCATATATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAAC
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGGTGCCTAAT
** * * * * * **
152146 CATGAAAAGAATGGAGACAATTAGAGA-A-TCAACGCTTACCTTA-T-AAGGGATGAACAATGAT
66 CATGAAAAGAATGGAGATTAGTA-AGATATTC-ACGTTTGCCTTATTAAAGAGACGAACTTTGAT
* ** * * *
152207 TTTAGGGACAATA-GG--GCAGAGGAAA-CATTT
129 TCTA-TCA-AAAACGGTTG-AAAGAAAAGC-TTT
* * * * * * * * * * * * * * ** *
152237 CCATGCAAAAGCAAATCGTCAATACCATTTACCCGAATG-AGCAGAATGTATTTATAGAACATAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * * * * **
152301 TCAT-AAAATGAATGAAGACCTTTACT-AGA-ATCCATGTTTGTCTCATTTGAG-GAGCGAACTT
65 TCATGAAAA-GAATGGAGA---TTAGTAAGATATTCACGTTTGCCTTATTAAAGAGA-CGAACTT
* * * * * *
152362 AGACAT-TAT-AAAAATTGGTGGGAAG-AAAGCCTT
125 TGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTT
* ** * * * *
152395 TCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATG-AGAAGACTATGTTTATGGCGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * * * * * * *
152459 TCCTGAAAAGAAAGGGGATTATTATGACTATTCATGTTTGTCTTATTTAAGAGAC-AAGCATTGA
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAA-CTTTGA
* *
152523 TTCCATCAAAAACGATTGAAAGAAAAGCTTT
128 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * **
152554 TCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATG-AGTGGAATGTGTTTTTGGT-TTTCA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCT-A
* ** * * * * *
152617 ATTATGAAAAGAATGGAGACTGTTTTAAGA-A-TCAACGCTTGCCTTATTTAAGGGATGAA-TAA
64 ATCATGAAAAGAATGGAGA-T-TAGTAAGATATTC-ACGTTTGCCTTATTAAAGAGACGAACT-T
* * ** *
152679 T-ATTTTTATGGAAAATA-GG-CCAAAGGAAA-CATTT
125 TGA-TTCTAT-CAAAA-ACGGTTGAAAGAAAAGC-TTT
* * * * ** * * * * * * *
152713 CCATGCAAAAGAAAATCATCAATACCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAAC
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGGTGCCTAAT
* * * * * * * * * *
152778 CATGAAAAAGAATGGAGACT-GTTACGAGAATCAACGCTTGCCTTATTTATGGGAAGAA-TAATG
66 CATG-AAAAGAATGGAGATTAG-TAAGATATTC-ACGTTTGCCTTATTAAAGAGACGAACT-TTG
* ** *
152841 ATTTTAGGGAAAATA-GG--GCAAAGGAAA-CATTT
127 ATTCTA-TCAAAA-ACGGTTG-AAAGAAAAGC-TTT
* * * * * * * * * * * ** * *
152873 CCATGCAAAAGCAAATCATCATTACCATTTACCCAACTG-AGGAGAATGTGTTTACAGAGCATAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGG-GAATGTGTTTATGGTGCCTAA
* * * * * * * ** * *
152937 TCA-CAAAATGAATGAAGATCATTACTAGA-ATCCATGTTTGTCTTATTTGAG-GTGCGAACTTG
65 TCATGAAAA-GAATGGAGATTAGTA--AGATATTCACGTTTGCCTTATTAAAGAG-ACGAACTTT
* * * *
152999 GA--C-AT-TATAA------AAAG-AATGCCTT
126 GATTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* ** * ** * * **
153021 TCTTGCGAAACCAAAGTGTCAATATCGTGTATCCTTATG-AGAAGACTACGTTTATGGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * * * * *
153085 TCCTAAAAAGACTGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGAT
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAACTTTGAT
*
153150 TCTATCAGAAACGGTTGAAAGAAAAGCTTT
129 TCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * *
153180 TCTTGCGACACCAAAGCATCAATGTCATGTACCCTAATGAAGGGAATGTGTTCT-TGGTTCCCAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTT-TATGGTGCCTAA
* * * ** * * *
153244 TCACGAAAAGAATGGAGATTGTTGTGAGA-ATGAACGCTTGCCTTATTTAAGAGATGAACTTTGA
65 TCATGAAAAGAATGGAGA-T-TAGTAAGATATTCACGTTTGCCTTATTAAAGAGACGAACTTTGA
* ** * *
153308 TTTTAAGGAAAATATGG--CAAATG-AAA--TATT
128 TTCT-ATCAAAA-ACGGTTGAAA-GAAAAGCT-TT
* * * ** * * * * * *
153338 TCTAAGCAAAAAAAAATCATCATTATCCTTTA-CCTTAATG-AGGAGAATGTGTTTATTGTGCCT
1 TCT-TGCGACACCAAAGCATCAATATCATGTATCC-AAATGAAGG-GAATGTGTTTATGGTGCCT
* * * * * **
153401 AATCA-CAAAATGAATGAAGATCATTAGT-AGA-ATCCATGTTTGCCTCATTTGAG-GCACGAAC
63 AATCATGAAAA-GAATG--GA-GATTAGTAAGATATTCACGTTTGCCTTATTAAAGAG-ACGAAC
* * * * *
153462 TTAGACAT-TAT-AAAAATTGGTGGGAAG-AAAGCTTT
123 TTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTT
* * * * * ** * * **
153497 TCCTGCAAAACCAAAGCGTCAATATCGTGTATCCTTATG-AGAAGACTACGTTTATGGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * * * * *
153561 TCACGAAAAGAATGGGGAATAGTATGACTATTCACGGTTGCCTTGTTAAAGAGAC-AGGCTTTGA
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGA-ACTTTGA
153625 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
128 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * *
153656 TCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCT-TGGTTCCAAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTT-TATGGTGCCTAA
** * * * * * * *
153720 TCACAAAAAGAATGGAGATT-GTTATGAGAATCAGCGCTTGCCTTATTTAAGGGATGAACTTTGA
65 TCATGAAAAGAATGGAGATTAG-TAAGATATTCA-CGTTTGCCTTATTAAAGAGACGAACTTTGA
* ** * * * *
153784 TTTTAAGGAAAATATGG--CAAATG-AGA-CATT
128 TTCT-ATCAAAA-ACGGTTGAAA-GAAAAGCTTT
* * * ** * * * * * *
153814 TCTAGGCAAAAAAAAATCATCAATATCCTTTA-CCTTAATG-AGGAGAATGTGTTTGTTGTGCCT
1 TCT-TGCGACACCAAAGCATCAATATCATGTATCC-AAATGAAGG-GAATGTGTTTATGGTGCCT
* * * * * * * **
153877 AATCA-CAAAATGAATGAAGATCATTACTAGA-ATCCATGTTTGCCTCATTTGAG-GCACGAACT
63 AATCATGAAAA-GAATGGAGATTAGTA--AGATATTCACGTTTGCCTTATTAAAGAG-ACGAACT
* * * * *
153939 TAGATAT-TAT-AAAAATTGGTGGGAAG-AAAGCCTT
124 TTGAT-TCTATCAAAAA-CGGTTGAAAGAAAAGCTTT
* * * * ** * ** * * * **
153973 TCCTGCAAAACCGAAGTGTCAATATCGTGTATCCTTACG-AGAAGACTACGTTTATGGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * *
154037 TCACGAAAAGAATGG-GAGTTAGTATGACTATTCATGTTTGCCGTATTAAAGAGAC-AAGCTTTG
65 TCATGAAAAGAATGGAGA-TTAGTAAGA-TATTCACGTTTGCCTTATTAAAGAGACGAA-CTTTG
154100 ATTCTATCAAAAACGGTTGAAAGAAAAGCTTT
127 ATTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * * * * *
154132 TCTTACGACACCAAAGCATCAATGTCACGTATCCTAATGAAGGGAGTGTGTTTTTGGTTCCCAAT
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGGTGCCTAAT
* * * * * **
154197 CATGAAAAGAATGGAGACTGTTA-TCAGA-A-TCAACGCTTGCCTTATTTAAGGGATGAA-TAAG
66 CATGAAAAGAATGGAGA---TTAGTAAGATATTC-ACGTTTGCCTTATTAAAGAGACGAACT-TT
* * *
154258 GATTTTA-CAGAAAATAGG--GCAAAGGAAA-CATTT
126 GATTCTATCA-AAAA-CGGTTG-AAAGAAAAGC-TTT
* * ** * ** * * * * * *
154291 CCATGTAAAAGAAAATCATCAATACCATTTACCCTAATG-AGGAGAATGTGTTTATTGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGG-GAATGTGTTTATGGTGCCTAA
** * * * * ** * ** ** * *
154355 TC-CCAAAATGAATGAAGATCT-TTACTAGA-ATCCATGTTTATCTCATTTGAG-GTGTGGACGT
65 TCATGAAAA-GAATGGAGAT-TAGTA--AGATATTCACGTTTGCCTTATTAAAGAG-ACGAACTT
* * * * * *
154416 AGACAT-TAT-AAAAATTGGTGGGAAG-AAAGCCTT
125 TGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTT
* * ** * * *
154449 TCTTGCGACACCGAAGCGTCAATATCATGTATCCTTATG-AGAAGACTATGTTTATGGTGCCTAA
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAG-GGAATGTGTTTATGGTGCCTAA
* * * * *
154513 TCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTTGTCTTATTAAAGAGACAAACTTTGA
65 TCATGAAAAGAATGGAGATTAGTAAGA-TATTCACG-TTTGCCTTATTAAAGAGACGAACTTTGA
**
154578 TTCTATCCGAAACGGTTGAAAGAAAAGCTTT
128 TTCTATCAAAAACGGTTGAAAGAAAAGCTTT
* * * * * * * * *
154609 TCTTGTGACACCAAAGCGTCAATGTCATGTATCCTAATGAAGGAAATGTGTTTTTGTTTCCCAAT
1 TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGGTGCCTAAT
154674 CATGAAAAGAATGGAGA
66 CATGAAAAGAATGGAGA
154691 CTGTTATCAG
Statistics
Matches: 5144, Mismatches: 1663, Indels: 1069
0.65 0.21 0.14
Matches are distributed among these distances:
146 4 0.00
147 10 0.00
148 233 0.05
149 35 0.01
150 13 0.00
151 4 0.00
152 4 0.00
153 3 0.00
154 11 0.00
155 123 0.02
156 262 0.05
157 342 0.07
158 1324 0.26
159 1972 0.38
160 659 0.13
161 89 0.02
162 50 0.01
163 4 0.00
164 2 0.00
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (158 bp):
TCTTGCGACACCAAAGCATCAATATCATGTATCCAAATGAAGGGAATGTGTTTATGGTGCCTAAT
CATGAAAAGAATGGAGATTAGTAAGATATTCACGTTTGCCTTATTAAAGAGACGAACTTTGATTC
TATCAAAAACGGTTGAAAGAAAAGCTTT
Found at i:152891 original size:160 final size:158
Alignment explanation
Indices: 152565--152925 Score: 492
Period size: 160 Copynumber: 2.3 Consensus size: 158
152555 CTTGTGACAC
* ** ** **
152565 CAAAGCATCAATGTCATGTATCCTAATGAGTGGAATGTGTTTTTGGTTTTCAATTATGAAAAGAA
1 CAAATCATCAATACCATGTATCCTAATGAG-GGAATGTGTTTTTGGTTCCCAACCATGAAAAGAA
** * *
152630 TGGAGACTGTTTTAAGAATCAACGCTTGCCTTATTTAAGGGATGAATAATATTTTTATGGAAAAT
65 TGGAGACTGTTACAAGAATCAACGCTTGCCTTATTTAAGGGAAGAATAATATTTTTAGGGAAAAT
152695 AGGCCAAAGGAAACATTTCCATGCAAAAG
130 AGGCCAAAGGAAACATTTCCATGCAAAAG
*
152724 AAAATCATCAATACCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAACCATGAAAAAGA
1 CAAATCATCAATACCATGTATCCTAATG-AGGGAATGTGTTTTTGGTTCCCAACCATG-AAAAGA
* *
152789 ATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTATGGGAAGAATAATGA-TTTTAGGGAAA
64 ATGGAGACTGTTACAAGAATCAACGCTTGCCTTATTTAAGGGAAGAATAAT-ATTTTTAGGGAAA
*
152853 ATAGGGCAAAGGAAACATTTCCATGCAAAAG
128 ATAGGCCAAAGGAAACATTTCCATGCAAAAG
* * *
152884 CAAATCATCATTACCATTTA-CCCAACTGAGGAGAATGTGTTT
1 CAAATCATCAATACCATGTATCCTAA-TGAGG-GAATGTGTTT
152926 ACAGAGCATA
Statistics
Matches: 178, Mismatches: 19, Indels: 9
0.86 0.09 0.04
Matches are distributed among these distances:
159 54 0.30
160 123 0.69
161 1 0.01
ACGTcount: A:0.37, C:0.14, G:0.20, T:0.29
Consensus pattern (158 bp):
CAAATCATCAATACCATGTATCCTAATGAGGGAATGTGTTTTTGGTTCCCAACCATGAAAAGAAT
GGAGACTGTTACAAGAATCAACGCTTGCCTTATTTAAGGGAAGAATAATATTTTTAGGGAAAATA
GGCCAAAGGAAACATTTCCATGCAAAAG
Found at i:153192 original size:626 final size:624
Alignment explanation
Indices: 152110--153359 Score: 1794
Period size: 626 Copynumber: 2.0 Consensus size: 624
152100 CAATGTCATA
152110 TATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAACCATGAAAAGAATGGAGACAATTAGAGAAT
1 TATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAACCATGAAAAGAATGGAGACAATTAGAGAAT
* * *
152175 CAACGCTTACCTTATAAGGGATGAACAATGATTTTAGGGACAATAGGGCAGAGGAAACATTTCCA
66 CAACGCTTACCTTATAAGGGAAGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCA
* * *
152240 TGCAAAAGCAAATCGTCAATACCATTTACCCGAATGAGCAGAATGTATTTATAGAACATAATCAT
131 TGCAAAAGCAAATCATCAATACCATTTACCCGAATGAGCAGAATGTATTTACAGAACATAATCAC
*
152305 AAAATGAATGAAGACCTTTACTAGAATCCATGTTTGTCTCATTTGAGGAGCGAACTTAGACATTA
196 AAAATGAATGAAGACCATTACTAGAATCCATGTTTGTCTCATTTGAGGAGCGAACTTAGACATTA
152370 TAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGA
261 T-AAAA-------GAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGA
* * * *
152435 GAAGACTATGTTTATGGCGCCTAATCCTGAAAAGAAAGGGGATTATTATGACTATTCATGTTTGT
318 GAAGACTACGTTTATGGCGCCTAATCCTAAAAAGAAAGGGGATTAGTATGACTATTCACGTTTGT
* * *
152500 CTTATTTAAGAGACAAGCATTGATTCCATCAAAAACGATTGAAAGAAAAGCTTTTCTTGTGACAC
383 CTTATTAAAGAGACAAACATTGATTCCATCAAAAACGATTGAAAGAAAAGCTTTTCTTGCGACAC
* * ** * *
152565 CAAAGCATCAATGTCATGTATCCTAATG-AGTGGAATGTGTTTTTGGTTTTCAATTATGAAAAGA
448 CAAAGCATCAATGTCATGTACCCTAATGAAG-GGAATGTGTTCTTGGTTCCCAATCACGAAAAGA
* * *
152629 ATGGAGACTGTTTTAAGAATCAACGCTTGCCTTATTTAAGGGATGAA-TAAT-ATTTTTATGGAA
512 ATGGAGACTGTTGTAAGAATCAACGCTTGCCTTATTTAAGAGATGAACT-ATGA-TTTTAAGGAA
* *
152692 AATA-GGCCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATG
575 AATATGG-CAAAGGAAACATTTCCAAGCAAAAAAAAATCATCAATACCATG
**
152742 TATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAACCATGAAAAAGAATGGAGACTGTTACGAGA
1 TATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAACCATG-AAAAGAATGGAGACAATTA-GAGA
* * *
152807 ATCAACGCTTGCCTTATTTATGGGAAGAATAATGATTTTAGGGAAAATAGGGCAAAGGAAACATT
64 ATCAACGCTTACCTTA--TAAGGGAAGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATT
* * * *
152872 TCCATGCAAAAGCAAATCATCATTACCATTTACCC-AACTGAGGAGAATGTGTTTACAGAGCATA
127 TCCATGCAAAAGCAAATCATCAATACCATTTACCCGAA-TGAGCAGAATGTATTTACAGAACATA
* * * *
152936 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGTGCGAACTTGGA
191 ATCACAAAATGAATGAAGACCATTACTAGAATCCATGTTTGTCTCATTTGAGGAGCGAACTTAGA
* ** *
153001 CATTAT-AAA-AAGAATGCCTTTCTTGCGAAACCAAAGTGTCAATATCGTGTATCCTTATGAGAA
256 CATTATAAAAGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAA
* **
153064 GACTACGTTTATGGTGCCTAATCCTAAAAAGACTGGGGATTAGTATGACTATTCACGTTTGTCTT
321 GACTACGTTTATGGCGCCTAATCCTAAAAAGAAAGGGGATTAGTATGACTATTCACGTTTGTCTT
* * * *
153129 ATTAAAGAGACAAACTTTGATTCTATCAGAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAA
386 ATTAAAGAGACAAACATTGATTCCATCAAAAACGATTGAAAGAAAAGCTTTTCTTGCGACACCAA
153194 AGCATCAATGTCATGTACCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCACGAAAAGAATGG
451 AGCATCAATGTCATGTACCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCACGAAAAGAATGG
* * * *
153259 AGATTGTTGTGAGAATGAACGCTTGCCTTATTTAAGAGATGAACTTTGATTTTAAGGAAAATATG
516 AGACTGTTGTAAGAATCAACGCTTGCCTTATTTAAGAGATGAACTATGATTTTAAGGAAAATATG
* * *
153324 GCAAATGAAATATTTCTAAGCAAAAAAAAATCATCA
581 GCAAAGGAAACATTTCCAAGCAAAAAAAAATCATCA
153360 TTATCCTTTA
Statistics
Matches: 553, Mismatches: 56, Indels: 24
0.87 0.09 0.04
Matches are distributed among these distances:
626 304 0.55
627 6 0.01
632 40 0.07
633 17 0.03
634 22 0.04
635 2 0.00
636 162 0.29
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.29
Consensus pattern (624 bp):
TATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAACCATGAAAAGAATGGAGACAATTAGAGAAT
CAACGCTTACCTTATAAGGGAAGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCA
TGCAAAAGCAAATCATCAATACCATTTACCCGAATGAGCAGAATGTATTTACAGAACATAATCAC
AAAATGAATGAAGACCATTACTAGAATCCATGTTTGTCTCATTTGAGGAGCGAACTTAGACATTA
TAAAAGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTA
CGTTTATGGCGCCTAATCCTAAAAAGAAAGGGGATTAGTATGACTATTCACGTTTGTCTTATTAA
AGAGACAAACATTGATTCCATCAAAAACGATTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
CAATGTCATGTACCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCACGAAAAGAATGGAGACT
GTTGTAAGAATCAACGCTTGCCTTATTTAAGAGATGAACTATGATTTTAAGGAAAATATGGCAAA
GGAAACATTTCCAAGCAAAAAAAAATCATCAATACCATG
Found at i:153678 original size:476 final size:476
Alignment explanation
Indices: 152729--155123 Score: 3410
Period size: 476 Copynumber: 5.1 Consensus size: 476
152719 AAAAGAAAAT
** *
152729 CATCAATACCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAACCATGAAAAAGAATGGA
1 CATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATG-AAAAGAATGGA
* * * *
152794 GACTGTTACGAGAATCAACGCTTGCCTTATTTATGGGAAGAATAATGATTTTAGGGAAAATAGGG
65 GACTGTTATGAGAATCAACGCTTGCCTTATTTAAGGGATGAATAATGATTTTAAGGAAAATAGGG
* *
152859 CAAAGGAAACATTTCCATGCAAAAGCAAATCATCATTACCATTTACCC-AACTGAGGAGAATGTG
130 CAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAA-TGAGGAGAATGTG
** * * *
152923 TTTACAGAGCATAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAG
194 TTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAG
* * *
152988 GTGCGAACTTGGACATTAT--AAA--------AAGAATGCCTTTCTTGCGAAACCAAAGTGTCAA
259 GCGCGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGTGTCAA
* *
153043 TATCGTGTATCCTTATGAGAAGACTACGTTTATGGTGCCTAATCCTAAAAAGACTGGGGATTAGT
324 TATCGTGTATCCTTATGAGAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGT
*
153108 ATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAGAAACGGTTGAAAGAA
389 ATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAA
153173 AAGCTTTTCTTGCGACACCAAAG
454 AAGCTTTTCTTGCGACACCAAAG
* * *
153196 CATCAATGTCATGTACCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCACGAAAAGAATGGAG
1 CATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAG
* * * * * *
153261 ATTGTTGTGAGAATGAACGCTTGCCTTATTTAAGAGATGAACT-TTGATTTTAAGGAAAATATGG
66 ACTGTTATGAGAATCAACGCTTGCCTTATTTAAGGGATGAA-TAATGATTTTAAGGAAAATAGGG
* * * * * * *
153325 CAAATGAAATATTTCTAAGCAAAAAAAAATCATCATTATCC-TTTACCTTAATGAGGAGAATGTG
130 CAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAGGAGAATGTG
* *
153389 TTTATTGTGCCTAATCACAAAATGAATGAAGATCATTAGTAGAATCCATGTTTGCCTCATTTGAG
194 TTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAG
* * * * *
153454 GCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCTTTTCCTGCAAAACCAAAGCGTCAA
259 GCGCGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGTGTCAA
*
153519 TATCGTGTATCCTTATGAGAAGACTACGTTTATGGTGCCTAATCAC-GAAAAGAATGGGGAATAG
324 TATCGTGTATCCTTATGAGAAGACTACGTTTATGGTGCCTAATC-CTGAAAAGAATGGGGATTAG
* * * **
153583 TATGACTATTCACGGTTGCCTTGTTAAAGAGACAGGCTTTGATTCTATCAAAAACGGTTGAAAGA
388 TATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGA
153648 AAAGCTTTTCTTGCGACACCAAAG
453 AAAGCTTTTCTTGCGACACCAAAG
* * **
153672 CATCAATGTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCCAAATCACAAAAAGAATGGAG
1 CATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAG
* * * *
153737 ATTGTTATGAGAATCAGCGCTTGCCTTATTTAAGGGATGAACT-TTGATTTTAAGGAAAATATGG
66 ACTGTTATGAGAATCAACGCTTGCCTTATTTAAGGGATGAA-TAATGATTTTAAGGAAAATAGGG
* * * * * *
153801 CAAATGAGACATTTCTAGGCAAAAAAAAATCATCAATATCC-TTTACCTTAATGAGGAGAATGTG
130 CAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAGGAGAATGTG
* *
153865 TTTGTTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGCCTCATTTGAG
194 TTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAG
* * * * *
153930 GCACGAACTTAGATATTATAAAAATTGGTGGGAAGAAAGCCTTTCCTGCAAAACCGAAGTGTCAA
259 GCGCGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGTGTCAA
*
153995 TATCGTGTATCCTTACGAGAAGACTACGTTTATGGTGCCTAATCAC-GAAAAGAAT-GGGAGTTA
324 TATCGTGTATCCTTATGAGAAGACTACGTTTATGGTGCCTAATC-CTGAAAAGAATGGGGA-TTA
* * * *
154058 GTATGACTATTCATGTTTGCCGTATTAAAGAGACAAGCTTTGATTCTATCAAAAACGGTTGAAAG
387 GTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAG
*
154123 AAAAGCTTTTCTTACGACACCAAAG
452 AAAAGCTTTTCTTGCGACACCAAAG
* *
154148 CATCAATGTCACGTATCCTAATGAAGGGAGTGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAG
1 CATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAG
* *
154213 ACTGTTATCAGAATCAACGCTTGCCTTATTTAAGGGATGAATAAGGATTTTACA-GAAAATAGGG
66 ACTGTTATGAGAATCAACGCTTGCCTTATTTAAGGGATGAATAATGATTTTA-AGGAAAATAGGG
*
154277 CAAAGGAAACATTTCCATGTAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAGAATGTGT
130 CAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAGAATGTGT
* * *
154342 TTATTGTGCCTAATCCCAAAATGAATGAAGATCTTTACTAGAATCCATGTTTATCTCATTTGAGG
195 TTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGG
* * * * * * *
154407 TGTGGACGTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGACACCGAAGCGTCAAT
260 CGCGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGTGTCAAT
* *
154472 ATCATGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTA
325 ATCGTGTATCCTTATGAGAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTA
**
154537 TGACTATTCACGTTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCCGAAACGGTTGAAAGAA
390 TGACTATTCACG-TTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAA
*
154602 AAGCTTTTCTTGTGACACCAAAG
454 AAGCTTTTCTTGCGACACCAAAG
* * *
154625 CGTCAATGTCATGTATCCTAATGAAGGAAATGTGTTTTTGTTTCCCAATCATGAAAAGAATGGAG
1 CATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAG
* * *
154690 ACTGTTATCAGAATCAATGCTTGCCTTATTTAAGGGATGAATAATGATTTTATGGAAAATAGGGC
66 ACTGTTATGAGAATCAACGCTTGCCTTATTTAAGGGATGAATAATGATTTTAAGGAAAATAGGGC
* *
154755 AAAGGAAACATTTCCATGTAAAAGCAAATCATCAATACCATTTACCCTAATGAGGAGAATGTGTT
131 AAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAGAATGTGTT
* * * * * *
154820 TATAGAGCATAATCACAAAATGAATGAAGATCTTTACTAGAGTCCATGTTTGTCTCATTTAAGGC
196 TATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGC
* *
154885 GCGAACTTGGACATTAT--AAA--------AAGAATGCCTTTCTTGCGAAACCAAAGTGTCAATA
261 GCGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGTGTCAATA
*
154940 TCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTAT
326 TCGTGTATCCTTATGAGAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTAT
* * * *
155005 GATTGTTCACGTTTGTCTAATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAA-AAAG
391 GACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAA
155069 GCTTTTCTTGCGACACCAAAG
456 GCTTTTCTTGCGACACCAAAG
* *
155090 CATCAATGTCTTGTATCCTAGTGAAGGGAATGTG
1 CATCAATGTCATGTATCCTAATGAAGGGAATGTG
155124 ATGACAACCA
Statistics
Matches: 1752, Mismatches: 154, Indels: 46
0.90 0.08 0.02
Matches are distributed among these distances:
465 53 0.03
466 235 0.13
467 156 0.09
468 3 0.00
475 11 0.01
476 965 0.55
477 329 0.19
ACGTcount: A:0.35, C:0.15, G:0.20, T:0.30
Consensus pattern (476 bp):
CATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAG
ACTGTTATGAGAATCAACGCTTGCCTTATTTAAGGGATGAATAATGATTTTAAGGAAAATAGGGC
AAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAGAATGTGTT
TATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGC
GCGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGTGTCAATA
TCGTGTATCCTTATGAGAAGACTACGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTAT
GACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAA
GCTTTTCTTGCGACACCAAAG
Found at i:160152 original size:42 final size:42
Alignment explanation
Indices: 160097--160206 Score: 184
Period size: 42 Copynumber: 2.6 Consensus size: 42
160087 TTCTTCTCTC
* *
160097 CTCCTCCTGTCATCCCTCCTCTCTCTATTATCTCCCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCCCCTGTCT
* *
160139 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCCCCTGTCT
160181 CTCCTCCTATCATCCCTCCTCTCTCT
1 CTCCTCCTATCATCCCTCCTCTCTCT
160207 TCTTTCTCTT
Statistics
Matches: 63, Mismatches: 5, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
42 63 1.00
ACGTcount: A:0.09, C:0.48, G:0.03, T:0.40
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCCCCTGTCT
Found at i:162972 original size:476 final size:476
Alignment explanation
Indices: 161825--164005 Score: 2976
Period size: 476 Copynumber: 4.6 Consensus size: 476
161815 GTTTTCATCA
* * * ** *
161825 GAATGTGTTCTTGGTTCCCAATCACGAAAAGAATGGAGATTGTTGTGAGAATCAACGTTTGCCTT
1 GAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTT
* * * ** * * *
161890 ATTTAAGGGGTGAACTTTAATTTTAAGGAAAATATGGCAATTGAAACATTTCTAAGCAAAAAAAA
66 ATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGC--AAAAGA
161955 AAATCATCAATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
129 AAATCATCAATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
*
162020 GAAGATCATCA-TAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTG
194 GAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTG
* * * * *
162084 GTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGTGTCAATATCATGTATCCTCATGAGAAAACTAT
259 GTGGGAAGAAAGCCTTTCTTACAAAACCAAAGCGTCAATATCATGTATCCTTATGAGAAGACTAT
* ** * *
162149 GTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGTAACACTATTCACGTTTTGTCTTATTAA
324 GTTTATGGTGCCTAATCATGAAAAGAAAGGGGATTAGTATGACTATTCATG-TTTGTCTTATTTA
* * * * * * *
162214 AGAGACGAACTTTGATTCCATCAAAAACGGTTGAAAGAAAAGCTTTTCCTGCGACACTAAATCAT
388 AGAGACAAACTTTGATTCTATAAAAAACGGTTGAAAGAAAAGCTATTCTTGCGACACCAAAGCAT
*
162279 CAATGTCATGTATCCTAATGAAGG
453 CAATGTCAAGTATCCTAATGAAGG
* * *
162303 GAATGTGTTTTTGGTTCCCAACCATGAAAAGAATGGAGACTATTA-GAGAATCAACGCTTACCTT
1 GAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTT
** * * *
162367 ATTTAAGGGATGAACAATGATTTTAGGGAAAATAGGGCAGAGGAAACATTTCCATGCAAAAGCAA
66 ATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAA
* * * * *
162432 ATCATCAATA-CCATTTACCCTAATGAGAAGAATGTGTTTATAGAGCATAATCACAAACTGAATG
131 ATCATCAATATCC-TTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * *
162496 AAGATCTTTACTAGAATCCATGTTTATCTCATTTGA-GAAGCGAACTTAGACATTATAAAAATTG
195 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCA-CGAACTTAGACATTATAAAAATTG
* *
162560 GTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCATGTATCCTTATGAGAAGACTAT
259 GTGGGAAGAAAGCCTTTCTTACAAAACCAAAGCGTCAATATCATGTATCCTTATGAGAAGACTAT
* *
162625 GTTTATGGTGCCTAATCCTGAAAAGAAAGGGGATTAGTATGACTATTCATGTTTGTGTTATTTAA
324 GTTTATGGTGCCTAATCATGAAAAGAAAGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAA
* * * * *
162690 -AGATAAACTCTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACTAAAGCATC
389 GAGACAAACTTTGATTCTATAAAAAACGGTTGAAAGAAAAGCTATTCTTGCGACACCAAAGCATC
* *
162754 ACTGTCATGTATCCTAATGAAGG
454 AATGTCAAGTATCCTAATGAAGG
* * **
162777 GAATGTGTTCTTGGTTCCCAATCATGAAAAGAATGGAGATTGTTACGAGAATCAGTGCTTGCCTT
1 GAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTT
* * * *
162842 ATTTAAGGGATGAACTTTGATTTTAAGGAAAATATGGCAAATGAAACATTTCTAAGCAAAAGAAA
66 ATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAA
* *
162907 ATCATCAATATCCTTTACCTTAATGAGGAGAATGTGTTTATTGTGCCTAATCATAAATATGAATG
131 ATCATCAATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAA-ATGAATG
* * * *
162972 AAGATCTTTGCTAGAATCCATGTTTGCCTTATTTGAGGCACGAACTTAGACATTATAAAAATTGG
195 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGG
* * * * * * *
163037 TGGGAAGAAAGCCTTTCCTACAAAACCAAAGTGTTAATATCGTGTATACTTATGAGCAGACTACG
260 TGGGAAGAAAGCCTTTCTTACAAAACCAAAGCGTCAATATCATGTATCCTTATGAGAAGACTATG
* *
163102 TTTATGCTGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAG
325 TTTATGGTGCCTAATCATGAAAAGAAAGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAG
* *
163167 AAACAAACTTTGATTCTATAAAAAACGGTTGAAAGAAAAGCTATTCTTGCGACACCAAAGCGTCA
390 AGACAAACTTTGATTCTATAAAAAACGGTTGAAAGAAAAGCTATTCTTGCGACACCAAAGCATCA
* *
163232 ATGTCAAGTATCCTAGTGTAGG
455 ATGTCAAGTATCCTAATGAAGG
* *
163254 GAATGCGTTTTTGGTTCCCAATCATGAAAAGAACT-GAGACTGGTACGAGAATCAACGCTTGCCT
1 GAATGTGTTTTTGGTTCCCAATCATGAAAAGAA-TGGAGACTGTTACGAGAATCAACGCTTGCCT
* * *
163318 TATTTAAGGGATAAACTTTGGTTTTAAGGAAATTAGGGCAAAGGAAACATTTCCATGCAAAAGAA
65 TATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAA
** * *
163383 AATTGTCAATATCCTTTACCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATG
130 AATCATCAATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * * *
163448 AAGATCCTTAGTAGAATCCAAGTTTGTCTCATTTGAGGCATCGAGCTTAGACATTATAAAAATTG
195 AAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCA-CGAACTTAGACATTATAAAAATTG
* * *
163513 GTGGGAAGAAAGCCTTTCTTACAAAACCAAAGCATCAATATCGTGTATCCTTACGAGAAGACTAT
259 GTGGGAAGAAAGCCTTTCTTACAAAACCAAAGCGTCAATATCATGTATCCTTATGAGAAGACTAT
** * * * ** *
163578 GTTTATCATGCCGAAT-TTTAAAAGAAA-AAGATTAGTATGACTATTCGTGTTTGTCTTATTTAA
324 GTTTATGGTGCCTAATCATGAAAAGAAAGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAA
* *
163641 GAGACAAACTTTGATTCTATAAAAAAACGGTTGAAAGAAAAGCTATTCTTGCGCCACCAAAGCGT
389 GAGACAAACTTTGATTCTAT-AAAAAACGGTTGAAAGAAAAGCTATTCTTGCGACACCAAAGCAT
* *
163706 CAATGTCAAGTATCCTAGTGTAGG
453 CAATGTCAAGTATCCTAATGAAGG
* ** ** *
163730 GGATGCATTTTTGGTTCCCAATCATGAAAAGAACCGAGACTGGTACGAGAATCAACGCTTGCCTT
1 GAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTT
* * * *
163795 ATTTAAGGGATGCACTTTGATTTTATGGAAAACAGGGCAAAGGAAACATTTCCATGCAAAAAAAA
66 ATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAA
* * * *
163860 ATCATGAACATCATTTACCTTCATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT-AATGA
131 ATCATCAATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
* * * * * * *
163924 AGATGATTACTAGAATCCTTATTTCTATCATTTGAGGCACAAACTTAGACATTATAAAAGTTGGT
196 AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGT
**
163989 GAAAAGAAAGCCTTTCT
261 GGGAAGAAAGCCTTTCT
164006 GATGAAAACC
Statistics
Matches: 1516, Mismatches: 175, Indels: 28
0.88 0.10 0.02
Matches are distributed among these distances:
474 161 0.11
475 292 0.19
476 623 0.41
477 400 0.26
478 40 0.03
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (476 bp):
GAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTT
ATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAA
ATCATCAATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGA
AGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGT
GGGAAGAAAGCCTTTCTTACAAAACCAAAGCGTCAATATCATGTATCCTTATGAGAAGACTATGT
TTATGGTGCCTAATCATGAAAAGAAAGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGA
GACAAACTTTGATTCTATAAAAAACGGTTGAAAGAAAAGCTATTCTTGCGACACCAAAGCATCAA
TGTCAAGTATCCTAATGAAGG
Found at i:167697 original size:158 final size:154
Alignment explanation
Indices: 165612--170581 Score: 1156
Period size: 159 Copynumber: 31.4 Consensus size: 154
165602 AATTGGTGGG
* * * * * *
165612 AAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTGTCCTTATGAGAAGACTATGTTTA
1 AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTTA
* * * *
165677 TGGTGCCTAATCCTGAAAAGGATGGGGATTAGTATGACTATTCACGTTTGTCTTGTTAAAGAAAC
66 TGGTGCCTAATCCTGAAAAGAAT-GGGATTAGTATGA-TATTCACGTTTGTCTTATTTAAGAGAC
* *
165742 -AAATATTGATTCTATCAGAAACGGTTGA
129 GAACT-TTGATT-TAT-AAAAACGGTTGA
* * * * *
165770 AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTT
1 AAGAAAA-CTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGA-AGAATATGTT
* * * * * * * * *
165834 TTTGGTTCCCAA-CCATGAAAAGAATGGAGACT-GTTACGAGAATCAACGCTTGCCTTATTTAAG
64 TATGGTGCCTAATCC-TGAAAAGAATGG-GATTAG-TATGATATTC-ACGTTTGTCTTATTTAAG
* * ** *
165897 GGATGAACAATGATTT-TAGCGAAAATAGG--GCA
125 AGACGAACTTTGATTTATA---AAAA-CGGTTG-A
* * * * * * * * * * * *
165929 AAGGAAACATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAAAGAGGAG-A-ATGTTT
1 AAGAAAAC-TTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTT
* * * ** * * * * * *
165992 ATAGAGCATAATCAC--AAAATGAATGAAAATCT-TTACTAGA-ATCCATGTTTGTATCATTTGA
65 ATGGTGCCTAATC-CTGAAAA-GAATG-GGAT-TAGTA-T-GATATTCACGTTTGTCTTATTTAA
* * * * * *
166053 G-GCGCGAACTTAGACATTATAAAAATTGGTGGG
124 GAG-ACGAACTTTGA-TTTATAAAAA-CGGTTGA
* * ** * * * *
166086 AAGAAAGCCTTTCTTGCGAAACCAAAGTGTCAATATCGTGCATCCTTATGAGAGGACTATGTTTA
1 AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTTA
* *
166151 TGGTGCCTAATCCTAAAAAGAATGGGATTAGTATGACTATTCACGTTTGTCTTA-GTAATGAGAC
66 TGGTGCCTAATCCTGAAAAGAATGGGATTAGTATGA-TATTCACGTTTGTCTTATTTAA-GAGAC
166215 GAACTTTGATTCTATCAAAAACGGTTGA
129 GAACTTTGATT-TAT-AAAAACGGTTGA
* * * *
166243 AAGAAAAACTTTTCTTACGACACCAAAGCATCAATGTCATGTA---TTAT-A-AAGGGAATGTGT
1 AAG-AAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAA--GAATATGT
* * * * * ** * * * *
166303 TTTTGGTTCCCAA-CCATGAAAAGAATGGAGACTATTACAAGAATCAACGCTTGCCTTATTTAAG
63 TTATGGTGCCTAATCC-TGAAAAGAATGG-GATTAGTATGATATTC-ACGTTTGTCTTATTTAAG
* * ** *
166367 GGATGAACAATGATTT-TAGGGAAAATAGG--GCA
125 AGACGAACTTTGATTTATA---AAAA-CGGTTG-A
* * * * * * * * * * * * *
166399 AAGGAAACATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAATAAGGAGAATGTGTTT
1 AAGAAAAC-TTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTT
* * * * * *
166464 ATAGAG-GAC-AATCAC--AAAATGAAAGAAGATCT-TTACTAGA-ATCCACGTTTGTCTCATTT
65 AT-G-GTGCCTAATC-CTGAAAA-GAATG-GGAT-TAGTA-T-GATATTCACGTTTGTCTTATTT
* * * * * * *
166523 GAG-GCGCGAACTTAGACATTATAAAAATTGGTGGG
122 AAGAG-ACGAACTTTGA-TTTATAAAAA-CGGTTGA
* * * ** * ** *
166558 AAGAAAGCCTTTCTTGCAAAACCAAAGTGTCAATATCGTGTATCCTTATGAGAAGACCATGCTTA
1 AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTTA
* *
166623 TGGTACCTAATCCTGAAAAGAATGGGATTAGTATGACTATTCACGTTTGT-TATATTAAAGAGAC
66 TGGTGCCTAATCCTGAAAAGAATGGGATTAGTATGA-TATTCACGTTTGTCT-TATTTAAGAGAC
166687 GAACTTTGATTCTATCAAAAACGGTTGA
129 GAACTTTGATT-TAT-AAAAACGGTTGA
* * * * *
166715 AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAT-AAAAGAATGTGTTT
1 AAGAAAA-CTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTT
* * * * * * * * * * * *
166779 TTGGTTCCCAA-CCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGG
65 ATGGTGCCTAATCC-TGAAAAGAATGG-GATTAGTATGATATTC-ACGTTTGTCTTATTTAAGAG
* ** *
166843 ATGAACAATGACTTTAGGGAAAATA-GG--GCA
127 ACGAACTTTGA-TTTA--TAAAA-ACGGTTG-A
* * * * * * * * * * * *
166873 AAGGAAACATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAATAAGAAGAATGTGTTT
1 AAGAAAAC-TTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTT
* * * * * * ** * * * *
166938 GTAGAGCTTAATCAC--AAAATGAGTGAAGATCTTTTCTAGA-ATTCATGTTTGTCTCATTTGAG
65 ATGGTGCCTAATC-CTGAAAA-GAATG-GGAT-TAGTAT-GATATTCACGTTTGTCTTATTTAAG
* * * *
167000 -GCACGAACTTAGACATTATAAAAATTGGTGGGA
125 AG-ACGAACTTTGA-TTTATAAAAA-CGGT-TGA
* * * * * *
167033 AA-AAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTGTCCTTATGAGAAGACTATGTTTA
1 AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTTA
* * * * * * *
167097 TGGTGCCTAATCATGAAAAGGATGGGATTAGTATGACTATTCACGTTTGTCATGTTAAAGAAACA
66 TGGTGCCTAATCCTGAAAAGAATGGGATTAGTATGA-TATTCACGTTTGTCTTATTTAAGAGACG
* *
167162 AACATTGATTCTATTAGAAACGGTTGA
130 AACTTTGATT-TA-TAAAAACGGTTGA
* * * * * *
167189 AAGAAAAGCTTTTATTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTT
1 AAGAAAA-CTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGA-AGAATATGTT
* * * * * * * *
167253 TTTGGTTCCTAA-CCATGAAAAGAATGGAGACT-GTTACGAGAATCAACGCTTGCCTTATTTAAG
64 TATGGTGCCTAATCC-TGAAAAGAATGG-GATTAG-TATGATATTC-ACGTTTGTCTTATTTAAG
* * *** *
167316 GGATGAACAACGATTT-TAGGGAAAATAGG--GCA
125 AGACGAACTTTGATTTATA---AAAA-CGGTTG-A
* * * * ** * * * * * *
167348 AAGGAAACATTTCCATGCAAAAGGAAATCATCAATACCATTTACCCTTGAAGAGGAG-A-ATGTT
1 AAGAAAAC-TTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTT-ATGAGAAGAATATGTT
* * * * * * * * *
167411 TATAGAGCATAATCAC--AAAATGAATGAAGATCT-TTACTAGA-ATCCATGTTTGTCTCATTTG
64 TATGGTGCCTAATC-CTGAAAA-GAATG-GGAT-TAGTA-T-GATATTCACGTTTGTCTTATTTA
* * * * * *
167472 AG-GCGCGAACTTAGAAATTATAAAAATTGGTGGG
123 AGAG-ACGAACTTTG-ATTTATAAAAA-CGGTTGA
* * ** * * *
167506 AAGAAAGCCTTTCTTGCGAAACCAAAGTGTCAATATCGTGCATCCTTATGAGAAGACTATGTTTA
1 AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTTA
*
167571 TGGTGCCTAATCCTGAAAAGAATGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACG
66 TGGTGCCTAATCCTGAAAAGAATGGGATTAGTATGA-TATTCACGTTTGTCTTATTTAAGAGACG
167636 AACTTTGATTCTATCAAAAACGGTTGA
130 AACTTTGATT-TAT-AAAAACGGTTGA
* * * *
167663 AAGAAAAACTTTTCTTACGACACCAAAGCATCAATGTCATGTA---TTAT-A-AAGGGAATGTGT
1 AAG-AAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAA--GAATATGT
* * * * * * ** * * * *
167723 TTTTGGTTCCCAA-CCATTAAAAGAATGGAGACTATTACAAGAATCAACGCTTGCCTTATTTAAG
63 TTATGGTGCCTAATCC-TGAAAAGAATGG-GATTAGTATGATATTC-ACGTTTGTCTTATTTAAG
* * **
167787 GGATGAACAATGATTTTAGTGAAAATA-GG--GCA
125 AGACGAACTTTGA-TTTA-T-AAAA-ACGGTTG-A
* * * * * * * * * * * * *
167819 AAGGAAACATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAATAAGGAGAATGTGTTT
1 AAGAAAAC-TTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTT
* * * * * * * * *
167884 GTAGAGCATAATCAC--AAAATGAGTGAAGATCT-TTACTAGA-ATCCATGTTTGT-TTCATTTA
65 ATGGTGCCTAATC-CTGAAAA-GAATG-GGAT-TAGTA-T-GATATTCACGTTTGTCTT-ATTTA
* * * *
167944 AG-G-CGTGAACTTTGACATTATAAAAATTGGTGGG
123 AGAGAC--GAACTTTGA-TTTATAAAAA-CGGTTGA
* * * * * *
167978 AAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTGTCCTTATGAGAAGACTATGTTTA
1 AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTTA
* * **
168043 TGGTGCCTAATCTTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCCTT-TGGAAGAGA
66 TGGTGCCTAATCCTGAAAAGAAT-GGGATTAGTATGA-TATTCACGTTTGT-CTTATTTAAGAGA
*
168107 CAAACTTTGATTCTATCAAAAACGGTTGA
128 CGAACTTTGATT-TAT-AAAAACGGTTGA
* * * * *
168136 AAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGAGAATGTGTT
1 AAGAAAA-CTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGA-AGAATATGTT
* * * * * * * *
168200 CT-TGGTTCCCAATCATGAAAATAATGGAGATT-GTTACGAGAATTAACGCTTG-CATTATTTAA
64 -TATGGTGCCTAATCCTGAAAAGAATGG-GATTAG-TATGA-TATTCACGTTTGTC-TTATTTAA
* * *
168262 GGGATGAACTTTGATTTTATGGAAAA---TATGCCA
124 GAGACGAACTTTGA-TTTAT-AAAAACGGT-TG--A
* * * * ** * * * * *
168295 AATG-AAGCATTTCTAAGCAAAAGAAAATCATCAATATCCT-TTTACCTTAATGAGGAGAATGTG
1 AA-GAAAACTTTTCT-TGCGAAACCAAAGCATCAATATCATGTAT-CCTT-ATGAGAAGAATATG
* * ** * * * *
168358 TTTATAGTGCCTAATCAC--AAAATGAATGAAGATCTTTTCT-AGATTC-CTTGTTTTTCTCATT
62 TTTATGGTGCCTAATC-CTGAAAA-GAATG-GGAT-TAGTATGATATTCAC--GTTTGTCTTATT
* * * *
168419 TAAG-GTGCGAACTTTGACATTATAAAAATTGGTGGGA
121 TAAGAG-ACGAACTTTGA-TTTATAAAAA-CGGT-TGA
* * * * * *
168456 AA-AAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTGTCCTTATGAGAAGACTATGTTTA
1 AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTTA
* * *
168520 TGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTGTTAAAGAAAC
66 TGGTGCCTAATCCTGAAAAGAAT-GGGATTAGTATGA-TATTCACGTTTGTCTTATTTAAGAGAC
* * **
168585 AAACATCAATTCTATCAAAAACGGTTGA
129 GAACTTTGATT-TAT-AAAAACGGTTGA
** * * * * * *
168613 AAGAAAAGCTTTTCTTGATACAGCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTT
1 AAGAAAA-CTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGA-AGAATATGTT
* * * * * * * * * *
168677 TTTAGTTCCCAA-CCATGAAAAGAATGGAGACT-GTTACGAGAATCAACGCTTGCCTTATTTAAG
64 TATGGTGCCTAATCC-TGAAAAGAATGG-GATTAG-TATGATATTC-ACGTTTGTCTTATTTAAG
* * ** *
168740 GGATGAACAATGATTT-TAGGGAAAATAGG--GCA
125 AGACGAACTTTGATTTATA---AAAA-CGGTTG-A
* * * * * * * * * * * ** *
168772 AAGGAAACATTTCCATGCAAAAGCAAATCACCAATACCATTTACCCTAAACAGGAA-AATGTGTT
1 AAGAAAAC-TTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGA-GAAGAATATGTT
* * * * * * * * *
168836 TATAGAGCATAATCAC--AAAATGAATGAAGATCT-TTACTAGA-ATCCATGTTTGTCTCATTTG
64 TATGGTGCCTAATC-CTGAAAA-GAATG-GGAT-TAGTA-T-GATATTCACGTTTGTCTTATTTA
* * * * * *
168897 AGCCG-CGAACTTAGACATCATAAAAACTGGTGGG
123 AG-AGACGAACTTTGA-TTTATAAAAAC-GGTTGA
** * * * * *
168931 AAGAATGCCTTTCTTGCGAAACCAAAGCGTCAATATCATGTCTCCTTATGAGAAGACTATATTTA
1 AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTTA
* * *
168996 TGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTCTCCTATTTAAGAGAC
66 TGGTGCCTAATCCTGAAAAGAAT-GGGATTAGTATGA-TATTCACGTTTGTCTTATTTAAGAGAC
*
169061 AAACTTTGATTCTATCAAAAACGGTTGA
129 GAACTTTGATT-TAT-AAAAACGGTTGA
** * * * *
169089 AAGAAATGTTTTTCTTGCGACACAAAAGCATCAATGTCATGTATCCTAATGA-AGAGAATATGTT
1 AAGAAA-ACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGA-AGAATATGTT
* * * * * **
169153 CT-TGGTTCCCAATCGTGAAAAGAATGGAGATT-GTTATGAGAATTAACACTTG-CATTATTTAA
64 -TATGGTGCCTAATCCTGAAAAGAATGG-GATTAG-TATGA-TATTCACGTTTGTC-TTATTTAA
* * * * *
169215 GGGATGAACTTTGATTTGAAGGAAAATATGG--CA
124 GAGACGAACTTTGATTT--A-TAAAA-ACGGTTGA
* * ** * * * * * * * *
169248 AATG-AAACATTTCTAAGC-AAATGAAAATCATCAATATCCTTTAACATAATGAGGAGAATGTGT
1 AA-GAAAACTTTTCT-TGCGAAA-CCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGT
* * * * * *
169311 TTATAGTGCCTAATCAC--AAAATGAATGAAGATCT-TTACTAGA-ATCCATGTTTGTCTCATTT
63 TTATGGTGCCTAATC-CTGAAAA-GAATG-GGAT-TAGTA-T-GATATTCACGTTTGTCTTATTT
* * * * ** * *
169372 GAG-GCATGAAATTAGATATTATAAAAATTTGTGGG
122 AAGAG-ACGAACTTTGAT-TTATAAAAA-CGGTTGA
* * * ** * *
169407 AAGAAAGCCTTTCTTGCAAAACCAAAGTGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTA
1 AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTTA
* *
169472 TGGTGCCTAATCAC-GAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTAAAGAGA
66 TGGTGCCTAATC-CTGAAAAGAAT-GGGATTAGTATGA-TATTCACGTTTGTCTTATTTAAGAGA
*
169536 C-AAGCTTTGATTCTATCAAAAACGGTTAA
128 CGAA-CTTTGATT-TAT-AAAAACGGTTGA
* * * * *
169565 AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATCTAT-CTTAATGA-AGGGAATGTGC
1 AAGAAAA-CTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTT-ATGAGA-AGAATATG-
* * * * * * * * *
169628 TTT-TGGTTCGC-AAACATGAAAAGAATGGAAATT-GTTATGAGAATCAATGCTTGCCTTATTTA
62 TTTATGGTGC-CTAATCCTGAAAAGAATGG-GATTAG-TATGATATTC-ACGTTTGTCTTATTTA
* * * *
169690 GGGGATGAACTATGATTTTATGGAAAATA-GG--GCA
123 AGAGACGAACTTTGA-TTTAT--AAAA-ACGGTTG-A
* * * * ** * * * * * * *
169724 AAGGAAATAC-TTCCATACAAAAGAAAATCATCAATATCATTTACCCTAATAAGGAGAATGTGTT
1 AA-GAAA-ACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTT
* * * * * * * * * *
169788 TGTAGTGCCTAATCAC--AAAATGAATGAAGATCATTACT-ACAATTCAAGTTTCTCTCATTTGA
64 TATGGTGCCTAATC-CTGAAAA-GAATG-GGATTAGTA-TGA-TATTCACGTTTGTCTTATTTAA
* * * *
169850 G-GCACGAAATTAGACATTATAAAAATTGGTGTG-
124 GAG-ACGAACTTTGA-TTTATAAAAA-CGGT-TGA
* * * * * *
169883 AAGAAAGCCTTTCTTTCGAAACCAAAGCATCAATATCGTGCATCCTTATGAGAAGACA-ATATTT
1 AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGA-ATATGTTT
* ** *
169947 ATGGTGCCTAATCCT-AAAAGGAATGGGGATTAGTAAGACTATTCATATTTGTCTTATTAAAGAG
65 ATGGTGCCTAATCCTGAAAA-GAAT-GGGATTAGTATGA-TATTCACGTTTGTCTTATTTAAGAG
* *
170011 ACAAACTTTGTTTCTATCAAAAACGGTTGA
127 ACGAACTTTGATT-TAT-AAAAACGGTTGA
* * * ** * *
170041 AAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTAATGTATCCGAATGA-AGGGAATGTGTT
1 AAGAAAA-CTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGA-AGAATATGTT
* * * * * * * *
170105 CT-TGGTTCCCAATTAC-GAAAAGAATGGAGATT-GT-TGCGACAATCAAAGCTTGCCTTATTTA
64 -TATGGTGCCTAA-TCCTGAAAAGAATGG-GATTAGTAT--GATATTC-ACGTTTGTCTTATTTA
* * *** *
170166 AGGGATGAACTTTGATTT-TAAGGAAAATATGGCA
123 AGAGACGAACTTTGATTTATAA--AAACGGTTG-A
* * * ** * * * *
170200 AATG-AAACATTTCTAAGCAAAAAAAAAATCATCAATATCCTTTA-CCTTAATGAGGAGAA-AGT
1 AA-GAAAACTTTTCT-TGC-GAAACCAAAGCATCAATATCATGTATCCTT-ATGAGAAGAATA-T
* * * * * * *
170262 GTTTATAGTGCCTAATCAC--AAAATGAATGAAGATCATTACTAGA-ATCCATGTTTGTCTCATT
61 GTTTATGGTGCCTAATC-CTGAAAA-GAATG-GGATTAGTA-T-GATATTCACGTTTGTCTTATT
* * * * * * *
170324 TGAG-GCATGAACTTAGACATTATAAAAATTGGTGGG
121 TAAGAG-ACGAACTTTGA-TTTATAAAAA-CGGTTGA
* * * * *
170360 AAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTA
1 AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTTA
* * *
170425 TGGCGCCTAATTCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAC
66 TGGTGCCTAATCCTGAAAAGAAT-GGGATTAGTATGA-TATTCACGTTTGTCTTATTTAAGAGAC
*
170490 AAACTTTGATTCTATCAAAAACGGTTGA
129 GAACTTTGATT-TAT-AAAAACGGTTGA
* * * * *
170518 AAGAAAAGCTTTTCTTACGACACAAAAGCATCAATGTCATGTATCCTAATGA-AGAGAATATGTT
1 AAGAAAA-CTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGA-AGAATATGTT
170582 CTTGGCTCCC
Statistics
Matches: 3385, Mismatches: 1036, Indels: 781
0.65 0.20 0.15
Matches are distributed among these distances:
153 4 0.00
154 7 0.00
155 87 0.03
156 213 0.06
157 345 0.10
158 1126 0.33
159 1305 0.39
160 249 0.07
161 41 0.01
162 5 0.00
163 3 0.00
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (154 bp):
AAGAAAACTTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGAATATGTTTA
TGGTGCCTAATCCTGAAAAGAATGGGATTAGTATGATATTCACGTTTGTCTTATTTAAGAGACGA
ACTTTGATTTATAAAAACGGTTGA
Found at i:169075 original size:476 final size:476
Alignment explanation
Indices: 165379--175698 Score: 12868
Period size: 476 Copynumber: 21.6 Consensus size: 476
165369 CTAATAAAGG
* *
165379 GAATGGAGACTATTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGACTTTAGGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * *
165444 AATAGGGCAGAGGAAACATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAATAAGGAG
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
* * * * * **
165509 AATGTGTTTGTAGAGCATAATCACAAAATGAGTGAAGATCTTTTCTAGAATTAATGTTTGTCTCA
131 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
165574 TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
196 TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
* *
165639 CGTCAATATCGTGTGTCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGGATGGGG
261 CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
* * *
165704 ATTAGTATGACTATTCACGTTTGTCTTGTTAAAGAAACAAA-TATTGATTCTATCAGAAACGGTT
326 ATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACT-TTGATTCTATCAAAAACGGTT
165768 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
390 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
*
165833 TTTTGGTTCCCAACCATGAAAA
455 TTTTGGTTCCCAATCATGAAAA
*
165855 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGCGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* *
165920 AATAGGGCAAAGGAAACATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAAAGAGGAG
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
* * * *
165985 AA--TGTTTATAGAGCATAATCACAAAATGAATGAAAATCTTTACTAGAATCCATGTTTGTATCA
131 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
*
166048 TTTGAGGCGCGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
196 TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
* * * *
166113 TGTCAATATCGTGCATCCTTATGAGAGGACTATGTTTATGGTGCCTAATCCTAAAAAGAAT-GGG
261 CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
* * *
166177 ATTAGTATGACTATTCACGTTTGTCTTAGTAATGAGACGAACTTTGATTCTATCAAAAACGGTTG
326 ATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTG
* * *
166242 AAAGAAAAACTTTTCTTACGACACCAAAGCATCAATGTCATGTAT--T-ATAAAGGGAATGTGTT
391 AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTT
*
166304 TTTGGTTCCCAACCATGAAAA
456 TTTGGTTCCCAATCATGAAAA
* *
166325 GAATGGAGACTATTACAAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* *
166390 AATAGGGCAAAGGAAACATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAATAAGGAG
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
* * * *
166455 AATGTGTTTATAGAGGAC-AATCACAAAATGAAAGAAGATCTTTACTAGAATCCACGTTTGTCTC
131 AATGTGTTTATAG-TGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTC
* *
166519 ATTTGAGGCGCGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCAAA
195 ATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAA
* * * *
166584 GTGTCAATATCGTGTATCCTTATGAGAAGACCATGCTTATGGTACCTAATCCTGAAAAGAAT-GG
260 GCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGG
*
166648 GATTAGTATGACTATTCACGTTTGT-TATATTAAAGAGACGAACTTTGATTCTATCAAAAACGGT
325 GATTAGTATGACTATTCACGTTTGTCT-TATTAAAGAGACAAACTTTGATTCTATCAAAAACGGT
**
166712 TGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAAT-AAAAGAATGTG
389 TGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
*
166776 TTTTTGGTTCCCAACCATGAAAA
454 TTTTTGGTTCCCAATCATGAAAA
* * *
166799 GAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGACTTTAGGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * *
166864 AATAGGGCAAAGGAAACATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAATAAGAAG
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
* * * * * *
166929 AATGTGTTTGTAGAGCTTAATCACAAAATGAGTGAAGATCTTTTCTAGAATTCATGTTTGTCTCA
131 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
*
166994 TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAAAAAGCCTTTCTTGCGAAACCAAAG
196 TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
* * *
167059 CGTCAATATCGTGTGTCCTTATGAGAAGACTATGTTTATGGTGCCTAATCATGAAAAGGAT-GGG
261 CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
* * * * * *
167123 ATTAGTATGACTATTCACGTTTGTCATGTTAAAGAAACAAACATTGATTCTATTAGAAACGGTTG
326 ATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTG
*
167188 AAAGAAAAGCTTTTATTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTT
391 AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTT
* *
167253 TTTGGTTCCTAACCATGAAAA
456 TTTGGTTCCCAATCATGAAAA
*
167274 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAACGATTTTAGGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
*
167339 AATAGGGCAAAGGAAACATTTCCATGCAAAAGGAAATCATCAATACCATTTACCCTTGAA-GAGG
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCC-T-AATGAGG
* *
167403 AGAA--TGTTTATAGAGCATAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
129 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
* *
167466 CATTTGAGGCGCGAACTTAGAAATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
194 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
* *
167531 AGTGTCAATATCGTGCATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAAT-G
259 AGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
*
167595 GGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACGAACTTTGATTCTATCAAAAACGGT
324 GGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGT
* * *
167660 TGAAAGAAAAACTTTTCTTACGACACCAAAGCATCAATGTCATGTAT--T-ATAAAGGGAATGTG
389 TGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
* *
167722 TTTTTGGTTCCCAACCATTAAAA
454 TTTTTGGTTCCCAATCATGAAAA
* * *
167745 GAATGGAGACTATTACAAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGTGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* *
167810 AATAGGGCAAAGGAAACATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAATAAGGAG
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
* * * * *
167875 AATGTGTTTGTAGAGCATAATCACAAAATGAGTGAAGATCTTTACTAGAATCCATGTTTGTTTCA
131 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
* ** *
167940 TTTAAGGCGTGAACTTTGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
196 TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
* *
168005 CGTCAATATCGTGTGTCCTTATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAATGGGG
261 CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
* **
168070 ATTAGTATGACTATTCATGTTTGTCCTT-TGGAAGAGACAAACTTTGATTCTATCAAAAACGGTT
326 ATTAGTATGACTATTCACGTTTGT-CTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTT
* *
168134 GAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAAGAGAATGTGT
390 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
*
168199 TCTTGGTTCCCAATCATGAAAA
455 TTTTGGTTCCCAATCATGAAAA
* * * * ** *
168221 TAATGGAGATTGTTACGAGAATTAACGCTTGCATTATTTAAGGGATGAACTTTGATTTTATGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * * * * * * *
168286 AATATGCCAAATGAAGCATTTCTAAGCAAAAGAAAATCATCAATATCCTTTTACCTTAATGAGGA
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAGGA
* * * *
168351 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTTCTAGATTCCTTGTTTTTCTC
130 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTC
* ** * *
168416 ATTTAAGGTGCGAACTTTGACATTATAAAAATTGGTGGGAAAAAAGCCTTTCTTGCGAAACCAAA
195 ATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAA
*
168481 GCGTCAATATCGTGTGTCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGG
260 GCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGG
* * * **
168546 GATTAGTATGACTATTCACGTTTGTCTTGTTAAAGAAACAAACATCAATTCTATCAAAAACGGTT
325 GATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTT
** *
168611 GAAAGAAAAGCTTTTCTTGATACAGCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
390 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
* *
168676 TTTTAGTTCCCAACCATGAAAA
455 TTTTGGTTCCCAATCATGAAAA
168698 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * ** *
168763 AATAGGGCAAAGGAAACATTTCCATGCAAAAGCAAATCACCAATACCATTTACCCTAAACAGGAA
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
* *
168828 AATGTGTTTATAGAGCATAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
131 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
* * * * *
168893 TTTGAGCCGCGAACTTAGACATCATAAAAACTGGTGGGAAGAATGCCTTTCTTGCGAAACCAAAG
196 TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
* * *
168958 CGTCAATATCATGTCTCCTTATGAGAAGACTATATTTATGGTGCCTAATCCTGAAAAGAATGGGG
261 CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
* * * *
169023 ATTAGTATGACTATTCATGTTTCTCCTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTG
326 ATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTG
* * * * *
169088 AAAGAAATGTTTTTCTTGCGACACAAAAGCATCAATGTCATGTATCCTAATGAAGAGAATATGTT
391 AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTT
* *
169153 CTTGGTTCCCAATCGTGAAAA
456 TTTGGTTCCCAATCATGAAAA
* * * * * ** * *
169174 GAATGGAGATTGTTATGAGAATTAACACTTGCATTATTTAAGGGATGAACTTTGATTTGAAGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * * * * * *
169239 AATATGGCAAATGAAACATTTCTAAGCAAATGAAAATCATCAATATCC-TTTAACATAATGAGGA
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAGGA
169303 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTC
130 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTC
* * * * *
169368 ATTTGAGGCATGAAATTAGATATTATAAAAATTTGTGGGAAGAAAGCCTTTCTTGCAAAACCAAA
195 ATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAA
*
169433 GTGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCAC-GAAAAGAATGG
260 GCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CTGAAAAGAATGG
* *
169497 GGATTAGTATGACTATTCATGTTTGTCTTATTAAAGAGACAAGCTTTGATTCTATCAAAAACGGT
324 GGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGT
* * *
169562 TAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATCTATCTTAATGAAGGGAATGTG
389 TGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
* * *
169627 CTTTTGGTTCGCAAACATGAAAA
454 TTTTTGGTTCCCAATCATGAAAA
* * * * * * *
169650 GAATGGAAATTGTTATGAGAATCAATGCTTGCCTTATTTAGGGGATGAACTATGATTTTATGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * * * *
169715 AATAGGGCAAAGGAAATACTTCCATACAAAAGAAAATCATCAATATCATTTACCCTAATAAGGAG
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
* * * * * *
169780 AATGTGTTTGTAGTGCCTAATCACAAAATGAATGAAGATCATTACTACAATTCAAGTTTCTCTCA
131 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
* * *
169845 TTTGAGGCACGAAATTAGACATTATAAAAATTGGTGTGAAGAAAGCCTTTCTTTCGAAACCAAAG
196 TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
* * * *
169910 CATCAATATCGTGCATCCTTATGAGAAGACAATATTTATGGTGCCTAATCCT-AAAAGGAATGGG
261 CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAA-GAATGGG
* ** *
169974 GATTAGTAAGACTATTCATATTTGTCTTATTAAAGAGACAAACTTTGTTTCTATCAAAAACGGTT
325 GATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTT
* *
170039 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTAATGTATCCGAATGAAGGGAATGTGT
390 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
* * *
170104 TCTTGGTTCCCAATTACGAAAA
455 TTTTGGTTCCCAATCATGAAAA
* * * * ** *
170126 GAATGGAGATTGTTGCGACAATCAAAGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * * * * *
170191 AATATGGCAAATGAAACATTTCTAAGCAAAAAAAAAATCATCAATATCC-TTTACCTTAATGAGG
66 AATAGGGCAAAGGAAACATTTCCATGC-AAAAGAAAATCATCAATA-CCATTTACCCTAATGAGG
* *
170255 AGAAAGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCT
129 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
*
170320 CATTTGAGGCATGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
194 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
* *
170385 AGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGCGCCTAATTCTGAAAAGAATGG
259 AGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
* *
170450 GGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGT
324 GGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGT
* * * *
170515 TGAAAGAAAAGCTTTTCTTACGACACAAAAGCATCAATGTCATGTATCCTAATGAAGAGAATATG
389 TGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
* * *
170580 TTCTTGGCTCCCGATCATG-AAA
454 TTTTTGGTTCCCAATCATGAAAA
* * * * ** *
170602 GAATGGAGATTGTTATGAGAATTAACGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * * * *
170667 AATATGGCAAATGAAACATTTCTAAGCAAAAGAAAATCATCAATATCC-TTTACCTTAATGAGGA
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAGGA
* * * ***
170731 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAATATCATTATTAGAATCCAT-TTACCCT-
130 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTC
** * * * *
170794 A-AAGAGG-A-GAATGTGTTTATAGAGCATAATCACAAAA-TGAAT--GAAG--A-TCTTTAC-T
195 ATTTGAGGCACGAA-----CT-TAGA-CATTAT-A-AAAATTG-GTGGGAAGAAAGCCTTT-CTT
* * * * * * * * * * * * * ** *
170849 -AGAATCC-ATGTTTGTCTCAT-TTGAGGCA-CAAACTTAGACATTATAAAAATTTGTGGAAAGA
249 GCGAAACCAAAG--CGTC-AATATCG-TGTATC---CTT----ATGAGAAGACTATGT-TTATG-
** * * ** * * * * * * *
170910 AAGCCT-TTCTTATGAAACCAA-AGCG--T--TA--A-TA-TCATGTAT-CCTTATGAGA-AGAC
301 GTGCCTAATC--CTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGAC
* * * * * * * * ** *
170963 TATATTTATGGTTCTGAATCCTGAAAATAATGG-GGATTAG-AATGACTATTCATGTTTGTCTTA
364 -AAACTT-TGATTCT--AT-C---AAA-AACGGTTGA-AAGAAAAG-CTTTTC-T-TGCGAC--A
** * * * ** * * * *
171026 TTTAAGAG-A-CAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCT-TTTCTTGCG-ACAC
414 -CCAA-AGCATC-AA-TGTCA-TGTATC-CTAA----TGAAGGGAATG-TGTTT-TTG-GTTC-C
* * *
171087 CAAAGCAT-CAAT
465 C-AATCATGAAAA
* * ** * * * * ***** * * * ** * **
171099 GTCATGTATCCTAATGAAGGGAATGTGTTCTTGGTTCC-CAATTACGAAAAGAATGGA-GATTGT
1 G-AATGGAGACT-GTTACGAGAATCAACGCTT-G--CCTTATTTAAGGGATGAA-CAATGATT-T
*
171162 T-GCGAGAATCAAT-GCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATATGGCAAA
59 TAG-G-GAA--AATAG---GGC--A---AA-GGA--AAC----A---T--------T-T--C---
* * * *
171225 TGAAACATTTCTAAGCAAAACAAAATCATCAATATCCTTTACCTTAATGAGGAGAATGTGTTTAT
88 -----CA--T----GCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTAT
* * * * * *
171290 AGTGCCTAATCACAAAATGAATGAAGATCGTTACTACAATTCTTGTTTCTCTCATTTGAGGTACA
142 AGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGGCAC-
* * * *
171355 GAA-TTAGACATTATAAAAATTGGTGCGAAGAAAGCCTTTCTTTCAAAACCAAAGCATCAATATC
206 GAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAGCGTCAATATC
* * * *
171419 GTGCATCCTTATGAGAAGACAATATTTATGGTGCCTAATCCT-AAAAGGAATGGGGATTAGTAAG
271 GTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAA-GAATGGGGATTAGTATG
*
171483 ACTATTCACTTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAG
335 ACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAG
** * * * ** *
171548 CTTTTCTTGCGACACCAAAGTGTCAATGTGAAGTATCCTAAAGAAGGGAATGCATTTTTAG-TCC
400 CTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC
171612 TCAATCATGAAAA
465 -CAATCATGAAAA
* * * * * * ** *
171625 GAATCGAGACCGATACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * ** * * *
171690 AATATGGCAAATGAAACATTTGTAAGCAAAAGAAAATCATCAACATCC-TTTACCTTAATGAGGA
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAGGA
* * * *
171754 GAATGTGCTTATTGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGCCTC
130 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTC
* * *
171819 ATTTGAGGCACGAACTTAGACATCATTATAAAAATTGCTGGGAAGAAAGCCTTTCCTGCAAAACC
195 ATTTGAGGCACGAACTTAG--A-CATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* * *
171884 AAAGTGTCAATATCGTGTATCCTTATGATAAGACTATGTTTATGTTGCCTAATCAC-GAAAAGAA
257 AAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CTGAAAAGAA
* * *
171948 T--GG--T-GTATGACTATTCACGTTTGTCTTATTAAAGAGACAAGCGTTGATTCTATCAAAAAT
321 TGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAAC
* *
172008 GTTTGAAAGAAAAGCTTTTCTTGCGGCACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
386 GGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
*
172073 GCGTTTTTGGTTCCCAATCATGAAAA
451 GTGTTTTTGGTTCCCAATCATGAAAA
* * * ** * *
172099 CAATGGAGACTATTATGAGAATCAACGCTTGCCTTATCCAAGGGATGAATAATGATTTTATGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
*
172164 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATGCCATTTACCCTAATGAGGAG
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
* *
172229 AATGTATTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTATCTCA
131 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
* * *
172294 TTTGAGGCGCGAACTTAGACATTATAAAAATCGGTGGGAAGAAAGCCTTTCTTGCGATACCAAAG
196 TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
* * * * *
172359 CATCAATATCGTGTATCCTTAAGAGAAAACTAGGTTTATGGTGCCTAATCCTGAAAAGATTGGGG
261 CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
*
172424 ATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAGAAACGGTTG
326 ATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTG
* *
172489 AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATATCATATATCCTAATGAAGGGAATGTGTT
391 AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTT
*
172554 TTTGGTTCCTAATCATGAAAA
456 TTTGGTTCCCAATCATGAAAA
* * * * * * *
172575 GAATGGAGACCGTTATGAGAATCAACGCTTGCCTTTTTTAAGGGTTGAATAACGATTTTATGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * * *
172640 AATAGGGCTAAGGAAATATTTCCATGCAAAAGAAAATCATCAATATCATTTACCCTAATAAGGAG
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
* * * * * ** *
172705 AAAGTGTTTATAGTGCATAATCACAAAATGAATGAAGATCGTTACTACAATTCATGACTCTCTCA
131 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
* * *
172770 TTTGAGGCACGAAATTAGACATTATAAAAATTGGTGCGAAGAAAGCCTTTCTTTCGAAACCAAAG
196 TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
* * *
172835 CATCAATATCGTGTATCCTTATGAGAAGACAATATTTATGGTGCCTAATCCT-AAAAGGAATGGG
261 CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAA-GAATGGG
* * * *
172899 GATTAGTAAGACTATTCACATTTATCTTATTAAAGAGACAAACTTTGATTCTATCAAAAAAGGTT
325 GATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTT
* ** * * **
172964 GAAAGAAAAGCTTTTCTTGCGACATCAAAGTGTCAATGTGAAGTATCCTAATGAAGGGAATGCAT
390 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
173029 TTTTGG-TCCTCAATCATGAAAA
455 TTTTGGTTCC-CAATCATGAAAA
* * ** *
173051 GAATGGAGACTAG-TACGAGAACCAATGCTTGCCTTATTTAA-GGATGAACTTTGATTTTAAGGA
1 GAATGGAGACT-GTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGA
* * * * *
173114 AAATAGGGCAAAAGAAACATTTCCATGCAAAA-AAAATCATCAATATCATTTTCCCTCACGAGGA
65 AAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGA
* * * * * *
173178 GAATGTGTTTATAGTGCCAAATCACAAAATGAGTGAAGATCATTACTATAATCCTTGTTCGTCTC
130 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTC
* * * * * * * * *
173243 ATTTGAGGCCCAAACTTAGACATTACAAAAATTCGTTGAAAGAAAGCCCTTCTTACGACACCAAA
195 ATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAA
* * * * * *
173308 GCATCAATATCGTGTATCCTTATGAGAAGACTATATTTATGGTTCCGAATGCTGAAAATAATGGG
260 GCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGG
* * *
173373 GATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAGCTTTGATTCTATCAAAAACGGTT
325 GATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTT
* * *
173438 GAAAGAAAAGC-TTTCTCTGCGACACCAAAGCATTAATGTAATGTATCCGAATGAAGGGAATGTG
390 GAAAGAAAAGCTTTTCT-TGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
* * *
173502 TTCTTGGTTCCCAATTACGAAAA
454 TTTTTGGTTCCCAATCATGAAAA
* * * * *
173525 GAATGGAGATTGTTGCGACAATCAATGCTTGCCTTATTTAAGGGATGAACAATTGATTTTAAGTG
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAA-TGATTTT-AGGG
* * *
173590 AAAATATGGCAAAGGAAACATTTTCATGTAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
64 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
* * *
173655 AGAATGTGTTTATAGAGCATAATCAGAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
129 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCT
*
173720 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCGA
194 CATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
* *
173785 AGTGTCAATATCATGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
259 AGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGG
* * *
173850 GGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAAACAAACTTTGATTCTATCAGAAATGGT
324 GGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGT
* *
173915 TGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAAGTG
389 TGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
173980 TTTTTGGTTCCCAATCATGAAAA
454 TTTTTGGTTCCCAATCATGAAAA
* * * * * *
174003 GAATGGAGACCGTTATGAGAATCAATGCTTGCCTTATTTATGGGATGAATAATGATTTTATGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * * *
174068 AATAGGGCAAAGGAAAGATTTCTATGCAAAAGAAAATCATCAATACCATTTACCATCATGAGGAG
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
* * * **
174133 AATGTGTTTGTCGTGCCTAATCACAAAATGAAAGAAGATAATTACTAGAATCCATGTTTGTCTCA
131 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
* * * *
174198 TTTGAGGCACGAACTTAGACATTATAAGAATTGGTGGGAAGAAAGCTTTTCTTGTGAACCCAAAG
196 TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
* * * * * *
174263 CATCAATATCGTGGATGCTTAT--G-AGACTATGTTTATTGTGCCTAATCCTTAAAAGAATAGGG
261 CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
* * * * *
174325 ATTACTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTACCAAAAATGGTTG
326 ATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTG
*
174390 AAAGAAAAGCTTTTCTTGCAACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTT
391 AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTT
* *
174455 CTTGGTTCCCAATCACGAAAA
456 TTTGGTTCCCAATCATGAAAA
* * * * ** *
174476 TAATGGAGATTGTTGCGAGAATCAACGCTTGCCTTATTTAAGAGATGAACTTTGATTTTAAGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * * * * *
174541 AATATGGCAAATGAAACATTTCTAAGCAAAAAAAAATCATCAATATCC-TTTACCTTAATGAGGA
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAGGA
*
174605 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTC
130 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTC
*
174670 ATTTGAGGCACGAACATAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAA
195 ATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAA
* *
174735 GCATCAATATCGTGTATCCTTATGAGAAAACTATGTTTATGGTGCCTAA-CCATGAAAAGAATGG
260 GCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCC-TGAAAAGAATGG
** * ****
174799 GGATTAGTAACACTATTCACATTTGTCTTATTAAAGATTTGAACTTTGATTCTATCAAAAACGGT
324 GGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGT
* * * *
174864 TGAAAGAAAAACTTTTCCTGCGATACCAAAGCATCAATGTCATGTATCATAATGAAGGGAATGTG
389 TGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
* *
174929 TTTTTAGTTCCCAACCATGAAAA
454 TTTTTGGTTCCCAATCATGAAAA
* *
174952 GAATGGAGACTATTA-GAGAATCAATGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * *
175016 ACTAGGGCAGAGGAAACATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAATGAGGAG
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
* * * * *
175081 AATGTATTTATAGAGCATAATCACAAAATGAATGAAGATCTTTATTGGAATCCATGTTTGTCTCA
131 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
* *
175146 TTTGAGG-AGCGAACTAAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTCGCGAAACCAAA
196 TTTGAGGCA-CGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAA
* * * *
175210 GTGTCAATATCGTGTGTCCTTATGAGAGGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGT
260 GCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGG
* * * *
175275 GATTAGTATGACTATTAATGTTTGTCCTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTT
325 GATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTT
** * *
175340 GAAAGAAAAGCTTTTCTTGCGACATAAAAGCATCAATGTCATGTATCCAAATGAAGAGAATGTGT
390 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGT
*
175405 TCTTGGTTCCCAATCATGAAAA
455 TTTTGGTTCCCAATCATGAAAA
* * * * ** *
175427 GAATGGAGATTGTTATGAGAATTAACGCTTACCTTATTTAAGGGATGAACTTTGATTTTAAGGAA
1 GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
* * * * *
175492 AATATGGCAAATGAAACATTTCTAAGC-AAAGAAAATCATCAATATCC-TTTACCTTAATGAGGA
66 AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAGGA
*
175555 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCCC
130 GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTC
* * **
175620 ATGTGAGGCACAAACCTT-GACATTATAAAAATAAGTGGGAAGAAAGCCTTTCTTGC-AAACCCA
195 ATTTGAGGCACGAA-CTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAA-CCA
175683 AAGCGTCAATATCGTG
258 AAGCGTCAATATCGTG
175699 AATGGGAATT
Statistics
Matches: 8545, Mismatches: 1075, Indels: 449
0.85 0.11 0.04
Matches are distributed among these distances:
469 2 0.00
470 175 0.02
471 244 0.03
472 462 0.05
473 652 0.08
474 1584 0.19
475 909 0.11
476 2728 0.32
477 828 0.10
478 383 0.04
479 101 0.01
480 5 0.00
481 19 0.00
482 15 0.00
483 7 0.00
484 10 0.00
486 2 0.00
487 5 0.00
488 5 0.00
489 5 0.00
490 2 0.00
492 1 0.00
493 1 0.00
494 8 0.00
495 5 0.00
496 3 0.00
497 7 0.00
498 5 0.00
499 10 0.00
500 1 0.00
501 13 0.00
502 5 0.00
503 3 0.00
504 1 0.00
505 3 0.00
507 2 0.00
508 3 0.00
509 1 0.00
510 2 0.00
511 2 0.00
512 2 0.00
513 2 0.00
514 1 0.00
515 3 0.00
516 2 0.00
518 3 0.00
519 1 0.00
520 3 0.00
521 4 0.00
522 14 0.00
523 1 0.00
524 10 0.00
525 10 0.00
526 6 0.00
527 2 0.00
528 10 0.00
530 1 0.00
531 1 0.00
532 2 0.00
533 5 0.00
534 6 0.00
535 4 0.00
536 2 0.00
537 3 0.00
538 6 0.00
539 7 0.00
540 15 0.00
541 18 0.00
543 7 0.00
544 4 0.00
545 15 0.00
546 7 0.00
547 104 0.01
548 26 0.00
549 9 0.00
550 6 0.00
551 1 0.00
553 3 0.00
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (476 bp):
GAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTAGGGAA
AATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAG
AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCA
TTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAAAG
CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGG
ATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTG
AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTT
TTTGGTTCCCAATCATGAAAA
Found at i:170831 original size:71 final size:71
Alignment explanation
Indices: 170711--170857 Score: 224
Period size: 71 Copynumber: 2.1 Consensus size: 71
170701 AATCATCAAT
* * * * *
170711 ATCC-TTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAATATCATT
1 ATCCATTTACCCTAAAGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAATGAAGATCATT
*
170775 ATTAGA
66 ACTAGA
*
170781 ATCCATTTACCCTAAAGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAATGAAGATCTTT
1 ATCCATTTACCCTAAAGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAATGAAGATCATT
170846 ACTAGA
66 ACTAGA
170852 ATCCAT
1 ATCCAT
170858 GTTTGTCTCA
Statistics
Matches: 69, Mismatches: 7, Indels: 1
0.90 0.09 0.01
Matches are distributed among these distances:
70 4 0.06
71 65 0.94
ACGTcount: A:0.39, C:0.14, G:0.16, T:0.31
Consensus pattern (71 bp):
ATCCATTTACCCTAAAGAGGAGAATGTGTTTATAGAGCATAATCACAAAATGAATGAAGATCATT
ACTAGA
Found at i:176649 original size:476 final size:475
Alignment explanation
Indices: 175757--184210 Score: 11732
Period size: 476 Copynumber: 17.8 Consensus size: 475
175747 CTTTACTAGA
* *
175757 GAGAATGTGTTTATAGAGCATAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * *
175822 TCATTTGAGCCGCGAACTTAGACATTATAAAAACTGGTGGGAAGAACGCCTTTCTTGCGAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* *
175887 AAGCGTCAATATCGTGTGTCCTTATGAGAAGACTATATTTATGGTGCCTAATCCTGAAAAGAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCC-GAAAAGAATG
* * * *
175952 GGGATTAGTATGACTATTCATGTTTGTCCTATTTAAGAGACAAACTTTGATTCTATCAAAAACAG
195 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
* * *
176017 TTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAAGGAATCT
260 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* * * * * * *
176082 GTTCTTGTTTCCCAATCACGAAATGAATGGAGATTGTTACGAGAATCAATGTTTGCCTTATTTAA
325 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAA
* * * * * * * *
176147 GGGATGAACTTTGATTTTAAGGAAAATATGGCGAATGAAACATTTCTAAGCAGAAGAAAATCATC
390 GGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATC
* *
176212 AATATCC-TTTACCTTAATTAG
455 AATA-CCATTTACCCTAATGAG
* *
176233 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCCTTACTAGAATCCATGTTTGAC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* *
176298 TCATTTGAGGCACAAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* ** * *
176363 GAGTTTCAATATCGTGTATCCTTATGAGAAGATTATGTTTATGGTGCCTAATCACGAAAATAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CGAAAAGAATG
* * *
176428 GGGATTAGTATGACTATTCATGTTTGTCTTATTAAAGAGACAAGCTTTGTTTCTATCAAAAACGG
195 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
* * * * * *
176493 TTAAAAGAAAAGCTTTTCTTGCCACACCAAAGCATCAATGTCATGTATCTTACTAAAGGGAATAT
260 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* * * * * *
176558 GCTTTTGGTTCGCAATCATGAAATGAATGGAGACTGTTATGAGAATCAATGCTTGCCTTATTTAG
325 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAA
* *
176623 GGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAATATTTTCATGCAAAAGAAAATCATC
390 GGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATC
* *
176688 AATATCATTTACCCTAATAAG
455 AATACCATTTACCCTAATGAG
* * * * * * *
176709 GACAATGTGTTTATAGTGCCTAATCACGAAATGAATGAAGATCATTACTACAATTCACGTTTCTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * * * *
176774 TCATTTGAGGCACGAAATCAGACATTATAAAAATTAGTGCGAAGAAAGCCTTTCTTTCAAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* * * * * * **
176839 AAGCATCAATATCATGCATCCTTATGAGAATACAATATTTATGGTGCCTAATCTTAAAAGGAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCGAAAA-GAATG
* * * *
176904 GGGATTAGTAAGGCTATTCACATTTGTCTTATTAAAGAGACAAACTTTGATTCTATAAAAAACGG
195 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
* ** * * *
176969 TTGAAAGAAAAGCTTTTCCTGCGACACCAAAGTGTCAATGTGAAGTATCCTAATGAAGGGAATGC
260 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* * * * *
177034 ATTTTTGG-TCCTCAATCATGAAAAGAATGGAGACTGGTACAAGAATCAATGCTTGCCATATTTA
325 GTTTTTGGTTCC-CAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* * * * *
177098 AGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAAGAAACTTTTCCATGCAAAAAAAAATCAT
389 AGGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
* * * *
177163 CAATATCATTTAACGTCATGAG
454 CAATACCATTTACCCTAATGAG
* * *
177185 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTATAATCCTTGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * *
177250 TCATTTGAGGCACAAACTTAGACATTATAAAAATTCGTGGAAAGAAAGCCTTTCTTACGAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* * * * * * *
177315 AAGTGTCAATATCGTGTATCCTTATGAGAAGACTATATTTATAGTTCCGAATCCTGAAAATAATA
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCC-GAAAAGAATG
* * * *
177380 GGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACAAACTTTGATACTATCAAAAACGG
195 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
* * *
177445 TTGAAGGAAAAGCTTTTCCTGCAACACCAAAGCATCAATGTC----ATCCTAATGAAGGGAATGT
260 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* * *
177506 GTTCTTGGTTCCCAATCATGAAAAGAATGGAGATTGTTAAGAGAATCAACGCTTGCCTTATTTAC
325 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA-
* *
177571 A-GGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
389 AGGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
*
177635 CAATACCATTTACCTTAATGAG
454 CAATACCATTTACCCTAATGAG
* *
177657 GAGAATGTGTTTATAGAGCATAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
*** * * *
177722 TCATTTGAGATGCGAACTTAGACATTAAAAAAATTGGTGGCAAGAAAGACTTTCTTGCGAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
*
177787 AAGTC-TCAATATCGTGTATCCTTATTAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAAT
131 AAG-CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCC-GAAAAGAAT
* * *
177851 GGAGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAAACAAACTTTGATTCTATCAGAAACG
194 GGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACG
*
177916 GTTTAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
259 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* * * *
177981 TGTTTTTGGTTCCCAATCACGAAAAGAATGGAGATTGTTATGAGAATCAACACTTGCCTTATTTA
324 TGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* * * * * * * *
178046 AGGGATGAACTTTGATTTTAAGGAAAATATGGCAAATGAAACATTTCTAAGCAAAAAAAAAACAT
389 AGGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
*
178111 CAATATCC-TTTACCTTAATGAG
454 CAATA-CCATTTACCCTAATGAG
*
178133 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATT-CTTAGAATCCATGTTTGT
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTAC-TAGAATCCATGTTTGT
* * *
178197 CTCATTTGGGGCACGAACTTAGACACTATAAAAATTGGTGGGACGAAAGCCTTTCTTGCGAAACC
65 CTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* * * * * * * *
178262 AAAGCATCAATATCGTGTATCCTTATAAGAAGACTATATTTATAGTTCCGAATCCTAAAAATAAT
130 AAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCC-GAAAAGAAT
* * * **
178327 GGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACAAACTTTGATAGTATCAAAAACG
194 GGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACG
* * *
178392 GTTGAAGGAAAAGCTTTTCCTGCGACACCAAAGCATCAATGTC----ATCCAAATGAAGGGAATG
259 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* * *
178453 TGTTCTTGGTTCCCAATCATGAAAAGAATGGAGATTGTTATGAGAATCAACGCTTGCCTTATTTA
324 TGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* *
178518 AGGGATGAA-TAATGATTTTATGGAAAATAGGGTAAAGGAAATATTTCCATGCAAAAGAAAATCA
389 AGGGATGAACT-ATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCA
178582 TCAATACCATTTACCCTAATGAG
453 TCAATACCATTTACCCTAATGAG
* * *
178605 GAGAATGTGTTTATAGAGCATAATCACTAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * *
178670 TCATTTGAGG-AGCGAACATAGGCATTATGAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
66 TCATTTGAGGCA-CGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* *
178734 AAAGTGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAT
130 AAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CGAAAAGAAT
* * * * *
178799 GGGGATTAGTATGACTATTCATGTTTGTCTTATTTAA-AGATAAACTTTGATTATATCGAAAACG
194 GGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACG
*
178863 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGCGAATG
259 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* ** *
178928 TGTTTTTGGTTCCCAATCACGAAAAGAATGGAGGTTGTTACGAGAATCAATGCTTGCCTTATTTA
324 TGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* * * * * *
178993 AGGGATGAACTTTGATTTTAAGGAAAATATTGG-AAATGAAACATTTCTAAGCAAAAGAAAATCA
389 AGGGATGAACTATGATTTTATGGAAAATA-GGGCAAAGGAAACATTTCCATGCAAAAGAAAATCA
* *
179057 TCAATGTCC-TTTACCTTAATGAG
453 TCAAT-ACCATTTACCCTAATGAG
* * * * *
179080 GAGAATGTGTTTTTTGTGCCTAATCACAAAATGAATGAAGATCATTATTAGAATCCATGTTTGCC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * *
179145 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTAGGAAGAAAGCCTTTCCTGCAAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* * ** *
179210 AAGTGTCAATATCGTGTATTCTTATGAGAAGACTATGTTTATCATGCCTAATCATGAAAAGAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CGAAAAGAATG
*
179275 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAGCTTTGATTCTATCAAAAACGG
195 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
179340 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
260 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* * * *
179405 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTATTATGAGAATCAACGCTAGTCTTATTTAA
325 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAA
*
179470 GGGTTGAA-TAATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
390 GGGATGAACT-ATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
*
179534 CAATACCATTTACCCTAAGGAG
454 CAATACCATTTACCCTAATGAG
* *
179556 GAGAATGTGTTTATAGTGCCTAATCCCAAAATGAATAAAGATCTTTACTAGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * **
179621 TCATTTGAGGCACGGACTTAGACACTATAAAAATTGGTGGGGAGAAAGCCTTTCTTGCGATCCCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* * * **
179686 AAGCGTCAATATCATGTATCCGTATGAGAAGACTATGGTTATGGTAACTAATCCTGAAAAGAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCC-GAAAAGAATG
*
179751 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAGAAACGG
195 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
* * * * *
179816 TTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATTAATATCATATATCCTAATGATGGGAATGT
260 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
** * * *
179881 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACCATTATGAGAGTCAACGCTTGCCTTTTTTAA
325 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAA
* *
179946 GGGATGAA-TAACGATTTTATGGAAAA-AGGGCAAAGGAAACATTTCCATACAAAAGAAAATCAT
390 GGGATGAACT-ATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
**
180009 CAATACCATTTACCCTAAAAAG
454 CAATACCATTTACCCTAATGAG
*
180031 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTCTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* *
180096 TCATTTGAGGCAGGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCAAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* * * * *
180161 AAGTGTCAATATTGTGTATCCTAATGAGAAAACTATGTTTATGGTGCCTAATCATGAAAAGAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CGAAAAGAATG
* * * *
180226 GGGATTAGTAGGACTATTCACATTTGTCTTATT-AAGAG-CTGAACTTTGATTCTATCAATAACG
195 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGAC-AAACTTTGATTCTATCAAAAACG
* * *
180289 GTTGAAAGAAAAGCTTTTTTTGTGACACCAAAGCATCAATGTCGTGTATCCTAATGAAGGGAATG
259 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* *
180354 TGTTTTTGGTTCCCAACCATGAAAAAGAATGGAAACTGTTACGAGAATCAACGCTTGCCTTATTT
324 TGTTTTTGGTTCCCAATCATG-AAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTT
* * * * *** *
180419 AAGGGATAAACAACGATTTTAGGGAAAATAGTTTAAAGGAAACATTTCCATGCAAAAGCAAATCA
388 AAGGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCA
180484 TCAATACCATTTACCCTAATGAG
453 TCAATACCATTTACCCTAATGAG
* * * *
180507 GAGAATGTGTTTATAGAGCATAATTACAAAATGAATGAAGCTCTTTACTAGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* *
180572 TCATTTGAGGCGCGAACTTAGACATTATAGAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
*
180637 AAGTGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCC-GAAAAGAATG
* * *
180702 GGGATTAGTATGAATATTCACGTTTGTCTTATTAAGGAGACAAACTTTAATTCTATCAAAAACGG
195 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
* * *
180767 TTGAATGAAAAGCTTTTCTTGCAACACCAAAGCATCAATGTCATGTATCCTTATGAAGGGAATGT
260 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* * * * * *
180832 GCTTTTGGTTCGCAATCATGAAAAGAATGAAGACTGTTATGAGAATCAATGCTTGCC-TATTTAG
325 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAA
*
180896 GGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATAAAATCATC
390 GGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATC
* ** * *
180961 AATATCATTTATGCTAATAAT
455 AATACCATTTACCCTAATGAG
* * * * * * * *
180982 GAGAATGTGTTTATAGTTCCTAATCACAAAGTGAATGAATATCGTTACCACAATTCATGTTTCTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * * * ** **
181047 TTATTTGAGGCGCAAAATTAGACTTTATAAAAATTGGTGCAAAGAAAGCCTTTCTTTTGAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* * *
181112 AAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGCGCCTAATCCTAAAAAGAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCC-GAAAAGAATG
* * *
181177 GGGATTAGTAAGACTATTCACATTTGACTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
195 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
* * * ** * * **
181242 TTGAAAGAACAGCTTGTCTTGCGACCCCAAAGTGTCAATGTGAAGT-TCCTAATGAAGGGAATAC
260 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* *
181306 GTTTTTGG-TCCTCAATCATGAAAAGAATGGAGACTGGTACGAGAATCAACGCTTGCCATATTTA
325 GTTTTTGGTTCC-CAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* * * * * * **
181370 GGGGATGAACTTTGATTTTAAGGAAAATAGGGCTACGAAAACATTTCCATGCAAAAGAAAATTGT
389 AGGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
181435 CAATATCC-TTTACCCTAATGAG
454 CAATA-CCATTTACCCTAATGAG
* * *
181457 GATAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCCTTACTAGAATCCAAGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * *
181522 TCATTTGAGGCATCGAACTTAGACATTACAAAAATTGGTGGGAA-AAACACCTTTCTTACGAAAC
66 TCATTTGAGGCA-CGAACTTAGACATTATAAAAATTGGTGGGAAGAAA-GCCTTTCTTGCGAAAC
* ** * *
181586 CAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATCATGCCAAATCTTGAAAAGAA
129 CAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CGAAAAGAA
** * * *
181651 T-AAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAAAAAAC
193 TGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAAC
* * * * * * * *
181715 AGTTGAAACAAAAGCTATTCTTACGACACCAAAGCGTCAATGTCAAGTATCCTAGTGTAGGGAAT
258 GGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* * *
181780 GTGTTTTTGGTTCCCAATCATGAAAAGAATCGAAACTGGTACGAGAATCAACGCTTGCCTTATTT
323 GTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTT
* **
181845 AAGGGATGAACTTTGATTTTATGGAAAATAGGGTGAAGGAAACATTTCCATGCTAAAA-AAAATC
388 AAGGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGC-AAAAGAAAATC
* *
181909 ATCAACACCATTTACCCTTATGAG
452 ATCAATACCATTTACCCTAATGAG
** * *
181933 GAGAATGTGTTTATAGTGCCTAATCACAAAAT-AATGAAGATGATTACTAGAATCCTTGTTTCTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* ** * *
181997 TCATTTGAGGCACAAACTTAGACATTATAAAAATTGGTGAAAAGAAAGCCTTTCTAGCGAAATCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* * * *
182062 AAGCATCAGTATCATGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCCAAAAAGAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAAT-CCGAAAAGAATG
* * * * * *
182127 GGGATTAGTATGACTATTCACGTTTGCCTTGTTAAAGAGACAAACATTGATTCTATTAGAAATGG
195 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
* * *
182192 TTGAAAAAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGAATCCTAATGAAGGGAATAT
260 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* * *
182257 GCTTTTGGCTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAA
325 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAA
* * * ** *
182322 GAGATGAACAAAT-ATTTTATGGAAAACAACGCAAAGGAAACATTTCCAAGCAAAAGAAAATCAT
390 GGGATGAAC-TATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
182386 CAATACCATTTACCCTAATGAG
454 CAATACCATTTACCCTAATGAG
* * *
182408 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAACATCTTTACTTGAATCCATGTTTTTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * * **
182473 TGATTTGAGGCGCGAACTTAGACATT-TCAAAAATTGGAGGGAAAAAAGCCTTTCTTATGAAACC
66 TCATTTGAGGCACGAACTTAGACATTAT-AAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* * * *
182537 AAAGCGTCAATATCGTGTATCCTTATAAGAAAACTATGTTTATGGTGCCTAATCATGAGAAGAAT
130 AAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CGAAAAGAAT
*
182602 GGGAATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACG
194 GGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACG
182667 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
259 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* *
182732 TGTTTTTGGTTCCCAACCATGAAAAGAATGGAGACTGTTACGAGAATCAACACTTGCCTTATTTA
324 TGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* * * * * *
182797 AGGGATGAACAATGATTTTAGGGAAAATAGGGCAAGGGAAACATTTCCAGGCAAAGGCAAATCAT
389 AGGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
*
182862 CAATACCATTTACGCTAATGAG
454 CAATACCATTTACCCTAATGAG
* *
182884 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAACATCTTTACTTGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * * **
182949 TGATTTGAGGCGCGAACTTAGACATT-TCAAAAATTGGAGGGAAAAAAGCCTTTCTTATGAAACC
66 TCATTTGAGGCACGAACTTAGACATTAT-AAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* * * *
183013 AAAGCAGTCAATATCGTGTATCCTTATAAGAAAACTATGTTTATGGTGCCTAATCATGAGAAGAA
130 AAAGC-GTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CGAAAAGAA
* *
183078 TGGGAATTAGTATGACTATTCATGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAAC
193 TGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAAC
* * *
183143 GGTTGAAAGAAAAGCCTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGAAGAGAAT
258 GGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* * *
183208 GTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAACACTTGCCTTTTTT
323 GTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTT
*
183273 AAGAGATGAA-TAATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATC
388 AAGGGATGAACT-ATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATC
*
183337 ATCAATACCATTTATCCTAATGAG
452 ATCAATACCATTTACCCTAATGAG
* *
183361 GAGAATGTGTTTGTAGTGTCC-AATCATAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGT
1 GAGAATGTGTTTATAGTG-CCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGT
* * * * * * *
183425 CTCATTTGAGGGATGAACTTAGACATTATAATAATAGGTGGGAAGAAAGCCTTTCTAGCAAAATC
65 CTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* *
183490 AAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCACGAAAGGAAT
130 AAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CGAAAAGAAT
* * * * *
183555 GGGGATTTGTATGACTATTCACGTTTGTCATATTAAAGAGACAAACATTGATTCCATCAGAAACG
194 GGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACG
* *
183620 GTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGCCATGTATCCTAATGAAGGGAATG
259 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* *
183685 TGTTTTTGGTTCCCAATCATG-AAGGAATGGAGACTGTTATGAGAATCAACGCTTGCCTTATTTA
324 TGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* *
183749 AGGGATGAA-TAATTATTTTATGGAATATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCA
389 AGGGATGAACT-ATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCA
* *
183813 TCAATACCATTTTCCCTAATAAG
453 TCAATACCATTTACCCTAATGAG
* * * *
183836 GACAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCTTTACTGGAATCTATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * * *
183901 TCATTTAAGGCGCGAATTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTCCTCGCGAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* * *
183966 AAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCTGAAATGAATGG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCGAAAAGAATGG
*
184031 GGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACGAAA-TTTGATTCTATCAAAAACAG
196 GGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGAC-AAACTTTGATTCTATCAAAAACGG
**
184095 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCGTTGTCATGTATCCTAATGAAGGGAATGT
260 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* * ** *
184160 GTTTTTGGTTCCTAACCACAAAAAGAACGGAGACTGTTACGAGAATCAACG
325 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACG
184211 ACTGGCTTGT
Statistics
Matches: 7094, Mismatches: 816, Indels: 137
0.88 0.10 0.02
Matches are distributed among these distances:
471 68 0.01
472 768 0.11
473 8 0.00
474 410 0.06
475 1909 0.27
476 3375 0.48
477 552 0.08
478 4 0.00
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (475 bp):
GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCGAAAAGAATGG
GGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGT
TGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
TTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAAG
GGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCA
ATACCATTTACCCTAATGAG
Found at i:179987 original size:951 final size:952
Alignment explanation
Indices: 175757--184210 Score: 11790
Period size: 951 Copynumber: 8.9 Consensus size: 952
175747 CTTTACTAGA
* *
175757 GAGAATGTGTTTATAGAGCATAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * *
175822 TCATTTGAGCCGCGAACTTAGACATTATAAAAACTGGTGGGAAGAACGCCTTTCTTGCGAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* *
175887 AAGCGTCAATATCGTGTGTCCTTATGAGAAGACTATATTTATGGTGCCTAATCCTGAAAAGAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATG
* * * *
175952 GGGATTAGTATGACTATTCATGTTTGTCCTATTTAAGAGACAAACTTTGATTCTATCAAAAACAG
196 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
* * *
176017 TTAAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAAGGAATCT
261 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* * * * * * *
176082 GTTCTTGTTTCCCAATCACGAAATGAATGGAGATTGTTACGAGAATCAATGTTTGCCTTATTTAA
326 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAA
* * * * *
176147 GGGATGAACTTTGATTTTAAGGAAAATATGGCGAATGAAACATTTCTAAGCAGAAGAAAATCATC
391 GGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAAGAAAATCATC
* *
176212 AATATCCTTTACCTTAATTAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCC
456 AATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCA
* *
176277 TTACTAGAATCCATGTTTGACTCATTTGAGGCACAAACTTAGACATTATAAAAATTGGTGGGAAG
521 TTACTAGAATCCATGTTTGCCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAG
* * ** *
176342 AAAGCCTTTCTTGCAAAACCAGAGTTTCAATATCGTGTATCCTTATGAGAAGATTATGTTTATGG
586 AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGG
* * * *
176407 TGCCTAATCACGAAAATAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTAAAGAGACAAG
651 TGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAA
* * *
176472 CTTTGTTTCTATCAAAAACGGTTAAAAGAAAAGCTTTTCTTGCCACACCAAAGCATCAATGTCAT
716 CTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
* * * * * * * *
176537 GTATCTTACTAAAGGGAATATGCTTTTGGTTCGCAATCATGAAATGAATGGAGACTGTTATGAGA
781 GTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGA
* * *
176602 ATCAATGCTTGCCTTATTTAGGGGATGAACT-ATGATTTTATGGAAAATAGGGCAAAGGAAATAT
846 ATCAACGCTTGCCTTATTTAAGGGATGAA-TAATGATTTTATGGAAAATAGGGCAAAGGAAACAT
* * *
176666 TTTCATGCAAAAGAAAATCATCAATATCATTTACCCTAATAAG
910 TTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* * * * * * *
176709 GACAATGTGTTTATAGTGCCTAATCACGAAATGAATGAAGATCATTACTACAATTCACGTTTCTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * * * *
176774 TCATTTGAGGCACGAAATCAGACATTATAAAAATTAGTGCGAAGAAAGCCTTTCTTTCAAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* * * * * * *
176839 AAGCATCAATATCATGCATCCTTATGAGAATACAATATTTATGGTGCCTAAT-CTTAAAAGGAAT
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAA-GAAT
* * * *
176903 GGGGATTAGTAAGGCTATTCACATTTGTCTTATTAAAGAGACAAACTTTGATTCTATAAAAAACG
195 GGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACG
* ** * *
176968 GTTGAAAGAAAAGCTTTTCCTGCGACACCAAAGTGTCAATGTGAAGTATCCTAATGAAGGGAATG
260 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
** * * * *
177033 CATTTTTGG-TCCTCAATCATGAAAAGAATGGAGACTGGTACAAGAATCAATGCTTGCCATATTT
325 TGTTTTTGGTTCC-CAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTT
* * * *
177097 AAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAAGAAACTTTTCCATGCAAAAAAAAATCA
389 AAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAAGAAAATCA
* * * *
177162 TCAATATCATTTAACGTCATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
454 TCAATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* * * * * *
177227 CATTACTATAATCCTTGTTTGTCTCATTTGAGGCACAAACTTAGACATTATAAAAATTCGTGGAA
519 CATTACTAGAATCCATGTTTGCCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGA
* ** *
177292 AGAAAGCCTTTCTTACGAAACCAAAGTGTCAATATCGTGTATCCTTATGAGAAGACTATATTTAT
584 AGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTAT
* * * * * * * * *
177357 AGTTCCGAATCCTGAAAATAATAGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACA
649 GGTGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACA
* * * *
177422 AACTTTGATACTATCAAAAACGGTTGAAGGAAAAGCTTTTCCTGCAACACCAAAGCATCAATGTC
714 AACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC
* * *
177487 ----ATCCTAATGAAGGGAATGTGTTCTTGGTTCCCAATCATGAAAAGAATGGAGATTGTTAAGA
779 ATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGA
* *
177548 GAATCAACGCTTGCCTTATTTACA-GGATGAACAATGATTTTAGGGAAAATAGGGCAAAGGAAAC
844 GAATCAACGCTTGCCTTATTTA-AGGGATGAATAATGATTTTATGGAAAATAGGGCAAAGGAAAC
*
177612 ATTTCCATGCAAAAGAAAATCATCAATACCATTTACCTTAATGAG
908 ATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* *
177657 GAGAATGTGTTTATAGAGCATAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
*** * * *
177722 TCATTTGAGATGCGAACTTAGACATTAAAAAAATTGGTGGCAAGAAAGACTTTCTTGCGAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
*
177787 AAGTC-TCAATATCGTGTATCCTTATTAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAAT
131 AAG-CGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAAT
* * *
177851 GGAGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAAACAAACTTTGATTCTATCAGAAACG
195 GGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACG
*
177916 GTTTAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
260 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* * * *
177981 TGTTTTTGGTTCCCAATCACGAAAAGAATGGAGATTGTTATGAGAATCAACACTTGCCTTATTTA
325 TGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* * * * *
178046 AGGGATGAACTTTGATTTTAAGGAAAATATGGCAAATGAAACATTTCTAAGCAAAAAAAAAACAT
390 AGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAAGAAAATCAT
178111 CAATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
455 CAATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
* * *
178176 ATT-CTTAGAATCCATGTTTGTCTCATTTGGGGCACGAACTTAGACACTATAAAAATTGGTGGGA
520 ATTAC-TAGAATCCATGTTTGCCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGA
* * *
178240 CGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATAAGAAGACTATATTTAT
584 AGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTAT
* * * * * * * * *
178305 AGTTCCGAATCCTAAAAATAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACA
649 GGTGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACA
** * *
178370 AACTTTGATAGTATCAAAAACGGTTGAAGGAAAAGCTTTTCCTGCGACACCAAAGCATCAATGTC
714 AACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC
* * * *
178435 ----ATCCAAATGAAGGGAATGTGTTCTTGGTTCCCAATCATGAAAAGAATGGAGATTGTTATGA
779 ATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGA
* *
178496 GAATCAACGCTTGCCTTATTTAAGGGATGAATAATGATTTTATGGAAAATAGGGTAAAGGAAATA
844 GAATCAACGCTTGCCTTATTTAAGGGATGAATAATGATTTTATGGAAAATAGGGCAAAGGAAACA
178561 TTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
909 TTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* * *
178605 GAGAATGTGTTTATAGAGCATAATCACTAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * *
178670 TCATTTGAGG-AGCGAACATAGGCATTATGAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
66 TCATTTGAGGCA-CGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* *
178734 AAAGTGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCTTGAAAAGAAT
130 AAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAAT
* * * * *
178799 GGGGATTAGTATGACTATTCATGTTTGTCTTATTTAA-AGATAAACTTTGATTATATCGAAAACG
195 GGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACG
*
178863 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGCGAATG
260 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* ** *
178928 TGTTTTTGGTTCCCAATCACGAAAAGAATGGAGGTTGTTACGAGAATCAATGCTTGCCTTATTTA
325 TGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* * *
178993 AGGGATGAACTTTGATTTTAAGGAAAATATTGG-AAATGAAACATTTCTAAGCAAAAGAAAATCA
390 AGGGATGAACTTTGATTTTAAGGAAAATA-GGGCAAAGGAAACATTTCCAAGCAAAAGAAAATCA
* * *
179057 TCAATGTCCTTTACCTTAATGAGGAGAATGTGTTTTTTGTGCCTAATCACAAAATGAATGAAGAT
454 TCAATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* *
179122 CATTATTAGAATCCATGTTTGCCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTAGGA
519 CATTACTAGAATCCATGTTTGCCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGA
* * ** *
179187 AGAAAGCCTTTCCTGCAAAACCAAAGTGTCAATATCGTGTATTCTTATGAGAAGACTATGTTTAT
584 AGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTAT
**
179252 CATGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACA
649 GGTGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACA
*
179317 AGCTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC
714 AACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC
* *
179382 ATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTATTATGA
779 ATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGA
* * *
179447 GAATCAACGCTAGTCTTATTTAAGGGTTGAATAATGATTTTATGGAAAATAGGGCAAAGGAAACA
844 GAATCAACGCTTGCCTTATTTAAGGGATGAATAATGATTTTATGGAAAATAGGGCAAAGGAAACA
*
179512 TTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAAGGAG
909 TTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* *
179556 GAGAATGTGTTTATAGTGCCTAATCCCAAAATGAATAAAGATCTTTACTAGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * **
179621 TCATTTGAGGCACGGACTTAGACACTATAAAAATTGGTGGGGAGAAAGCCTTTCTTGCGATCCCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
* * * **
179686 AAGCGTCAATATCATGTATCCGTATGAGAAGACTATGGTTATGGTAACTAATCCTGAAAAGAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATG
*
179751 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAGAAACGG
196 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
* * * * *
179816 TTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATTAATATCATATATCCTAATGATGGGAATGT
261 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
** * * *
179881 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACCATTATGAGAGTCAACGCTTGCCTTTTTTAA
326 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAA
** *
179946 GGGATGAA-TAACGATTTTATGGAAAA-AGGGCAAAGGAAACATTTCCATA-CAAAAGAAAATCA
391 GGGATGAACT-TTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCA-AGCAAAAGAAAATCA
* **
180008 TCAATA-CCATTTACCCTAAAAAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
454 TCAATATCC-TTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
* *
180072 TCTTTACTAGAATCCATGTTT-CTCTCATTTGAGGCAGGAACTTAGACATTATAAAAATTGGTGG
518 TCATTACTAGAATCCATGTTTGC-CTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGG
* ** * * *
180136 GAAGAAAGCCTTTCTTGCAAAACCAAAGTGTCAATATTGTGTATCCTAATGAGAAAACTATGTTT
582 GAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTT
* *
180201 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGTAGGACTATTCACATTTGTCTTATT-AAGAG-
647 ATGGTGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGA
* * * *
180264 CTGAACTTTGATTCTATCAATAACGGTTGAAAGAAAAGCTTTTTTTGTGACACCAAAGCATCAAT
712 C-AAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAAT
* * *
180329 GTCGTGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAACCATGAAAAAGAATGGAAACTGTT
776 GTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATG-AAAAGAATGGAGACTGTT
* * * * ***
180394 ACGAGAATCAACGCTTGCCTTATTTAAGGGATAAACAACGATTTTAGGGAAAATAGTTTAAAGGA
840 ACGAGAATCAACGCTTGCCTTATTTAAGGGATGAATAATGATTTTATGGAAAATAGGGCAAAGGA
*
180459 AACATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAATGAG
905 AACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* * * *
180507 GAGAATGTGTTTATAGAGCATAATTACAAAATGAATGAAGCTCTTTACTAGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* *
180572 TCATTTGAGGCGCGAACTTAGACATTATAGAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
66 TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
*
180637 AAGTGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATG
131 AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATG
* * *
180702 GGGATTAGTATGAATATTCACGTTTGTCTTATTAAGGAGACAAACTTTAATTCTATCAAAAACGG
196 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
* * *
180767 TTGAATGAAAAGCTTTTCTTGCAACACCAAAGCATCAATGTCATGTATCCTTATGAAGGGAATGT
261 TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
* * * * * *
180832 GCTTTTGGTTCGCAATCATGAAAAGAATGAAGACTGTTATGAGAATCAATGCTTGCC-TATTTAG
326 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAA
* * * *
180896 GGGATGAACTATGATTTTATGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAATAAAATCATC
391 GGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAAGAAAATCATC
* * * * * * *
180961 AATATCATTTATGC-TAATAATGAGAATGTGTTTATAGTTCCTAATCACAAAGTGAATGAATATC
456 AATATCCTTTA-CCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
* * * * * * * * * **
181025 GTTACCACAATTCATGTTT-CTCTTATTTGAGGCGCAAAATTAGACTTTATAAAAATTGGTGCAA
520 ATTACTAGAATCCATGTTTGC-CTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGA
**
181089 AGAAAGCCTTTCTTTTGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTAT
584 AGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTAT
* * * * * *
181154 GGCGCCTAATCCTAAAAAGAATGGGGATTAGTAAGACTATTCACATTTGACTTATTAAAGAGACA
649 GGTGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACA
* * * ** *
181219 AACTTTGATTCTATCAAAAACGGTTGAAAGAACAGCTTGTCTTGCGACCCCAAAGTGTCAATGTG
714 AACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC
* ** *
181284 AAGT-TCCTAATGAAGGGAATACGTTTTTGG-TCCTCAATCATGAAAAGAATGGAGACTGGTACG
779 ATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCC-CAATCATGAAAAGAATGGAGACTGTTACG
* * * * * * *
181347 AGAATCAACGCTTGCCATATTTAGGGGATGAACT-TTGATTTTAAGGAAAATAGGGCTACGAAAA
843 AGAATCAACGCTTGCCTTATTTAAGGGATGAA-TAATGATTTTATGGAAAATAGGGCAAAGGAAA
**
181411 CATTTCCATGCAAAAGAAAATTGTCAATATCC-TTTACCCTAATGAG
907 CATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATGAG
* * *
181457 GATAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCCTTACTAGAATCCAAGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * *
181522 TCATTTGAGGCATCGAACTTAGACATTACAAAAATTGGTGGGAA-AAACACCTTTCTTACGAAAC
66 TCATTTGAGGCA-CGAACTTAGACATTATAAAAATTGGTGGGAAGAAA-GCCTTTCTTGCGAAAC
* ** * *
181586 CAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATCATGCCAAATCTTGAAAAGAA
129 CAAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAA
** * * *
181651 T-AAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAAAAAAC
194 TGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAAC
* * * * * * * *
181715 AGTTGAAACAAAAGCTATTCTTACGACACCAAAGCGTCAATGTCAAGTATCCTAGTGTAGGGAAT
259 GGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* * *
181780 GTGTTTTTGGTTCCCAATCATGAAAAGAATCGAAACTGGTACGAGAATCAACGCTTGCCTTATTT
324 GTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTT
* ** *
181845 AAGGGATGAACTTTGATTTTATGGAAAATAGGGTGAAGGAAACATTTCCATGCTAAAA-AAAATC
389 AAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAAGC-AAAAGAAAATC
*
181909 ATCAACA-CCATTTACCCTT-ATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT-AATGAA
453 ATCAATATCC-TTTA-CCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
* * *
181971 GATGATTACTAGAATCCTTGTTT-CTCTCATTTGAGGCACAAACTTAGACATTATAAAAATTGGT
516 GATCATTACTAGAATCCATGTTTGC-CTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGT
** * * * *
182035 GAAAAGAAAGCCTTTCTAGCGAAATCAAAGCATCAGTATCATGTATCCTTATGAGAAGACTATGT
580 GGGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGT
*** * *
182100 TTATGGTGCCTAATCCCAAAAAGAATGGGGATTAGTATGACTATTCACGTTTGCCTTGTTAAAGA
645 TTATGGTGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGA
* * * * *
182165 GACAAACATTGATTCTATTAGAAATGGTTGAAAAAAAAGCTTTTCTTGCGACACCAAAGCATCAA
710 GACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAA
* * * *
182230 TGTCATGAATCCTAATGAAGGGAATATGCTTTTGGCTCCCAATCATGAAAAGAATGGAGACTGTT
775 TGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTT
* * * * **
182295 ACGAGAATCAATGCTTGCCTTATTTAAGAGATGAACAAAT-ATTTTATGGAAAACAACGCAAAGG
840 ACGAGAATCAACGCTTGCCTTATTTAAGGGATGAA-TAATGATTTTATGGAAAATAGGGCAAAGG
*
182359 AAACATTTCCAAGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
904 AAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* * *
182408 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAACATCTTTACTTGAATCCATGTTTTTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
* * * * **
182473 TGATTTGAGGCGCGAACTTAGACATT-TCAAAAATTGGAGGGAAAAAAGCCTTTCTTATGAAACC
66 TCATTTGAGGCACGAACTTAGACATTAT-AAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* * * *
182537 AAAGCGTCAATATCGTGTATCCTTATAAGAAAACTATGTTTATGGTGCCTAATCATGAGAAGAAT
130 AAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAAT
*
182602 GGGAATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACG
195 GGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACG
182667 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
260 GTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
* *
182732 TGTTTTTGGTTCCCAACCATGAAAAGAATGGAGACTGTTACGAGAATCAACACTTGCCTTATTTA
325 TGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
** * * * * *
182797 AGGGATGAACAATGATTTTAGGGAAAATAGGGCAAGGGAAACATTTCCAGGCAAAGGCAAATCAT
390 AGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAAGAAAATCAT
*
182862 CAATA-CCATTTACGC-TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAACA
455 CAATATCC-TTTAC-CTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
* * * * * *
182925 TCTTTACTTGAATCCATGTTTGTCTGATTTGAGGCGCGAACTTAGACATT-TCAAAAATTGGAGG
518 TCATTACTAGAATCCATGTTTGCCTCATTTGAGGCACGAACTTAGACATTAT-AAAAATTGGTGG
* ** * *
182989 GAAAAAAGCCTTTCTTATGAAACCAAAGCAGTCAATATCGTGTATCCTTATAAGAAAACTATGTT
582 GAAGAAAGCCTTTCTTGCGAAACCAAAGCA-TCAATATCGTGTATCCTTATGAGAAGACTATGTT
* * *
183054 TATGGTGCCTAATCATGAGAAGAATGGGAATTAGTATGACTATTCATGTTTGTCTTATTAAAGAG
646 TATGGTGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAG
* *
183119 ACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCCTTTCTTGTGACACCAAAGCATCAAT
711 ACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAAT
*
183184 GTCATGTATCCTAATGAAGAGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTA
776 GTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTA
* * * *
183249 TGAGAATCAACACTTGCCTTTTTTAAGAGATGAATAATGATTTTATGGAAAATAGGGCAAAGGAA
841 CGAGAATCAACGCTTGCCTTATTTAAGGGATGAATAATGATTTTATGGAAAATAGGGCAAAGGAA
*
183314 ACATTTCCATGCAAAAGAAAATCATCAATACCATTTATCCTAATGAG
906 ACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* *
183361 GAGAATGTGTTTGTAGTGTCC-AATCATAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGT
1 GAGAATGTGTTTATAGTG-CCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGT
* * * * * * *
183425 CTCATTTGAGGGATGAACTTAGACATTATAATAATAGGTGGGAAGAAAGCCTTTCTAGCAAAATC
65 CTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
* *
183490 AAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCAC-GAAAGGAA
130 AAAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATC-CTGAAAAGAA
* * * * *
183554 TGGGGATTTGTATGACTATTCACGTTTGTCATATTAAAGAGACAAACATTGATTCCATCAGAAAC
194 TGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAAC
* *
183619 GGTTGAAAGAAAAGCTTTTCTTGTGACACCAAAGCATCAATGCCATGTATCCTAATGAAGGGAAT
259 GGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAAT
* *
183684 GTGTTTTTGGTTCCCAATCATG-AAGGAATGGAGACTGTTATGAGAATCAACGCTTGCCTTATTT
324 GTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTT
* * *
183748 AAGGGATGAA-TAATT-ATTTTATGGAATATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAAT
389 AAGGGATGAACT--TTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAAGAAAAT
* * * * *
183811 CATCAATA-CCATTTTCCCTAATAAGGACAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAA
452 CATCAATATCC-TTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
* * * * * * *
183875 GATCTTTACTGGAATCTATGTTTGTCTCATTTAAGGCGCGAATTTAGACATTATAAAAATTGGTG
516 GATCATTACTAGAATCCATGTTTGCCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTG
* *
183940 GGAAGAAAGCCTTCCTCGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTT
581 GGAAGAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTT
*
184005 TATGGTGCCTAATC-TGAAATGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAG
646 TATGGTGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAG
* **
184069 ACGAAA-TTTGATTCTATCAAAAACAGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCGT
711 AC-AAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAA
* * ** *
184133 TGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCTAACCACAAAAAGAACGGAGACTGTT
775 TGTCATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTT
184198 ACGAGAATCAACG
840 ACGAGAATCAACG
184211 ACTGGCTTGT
Statistics
Matches: 6684, Mismatches: 753, Indels: 132
0.88 0.10 0.02
Matches are distributed among these distances:
947 499 0.07
948 1213 0.18
949 11 0.00
950 999 0.15
951 2121 0.32
952 1226 0.18
953 612 0.09
954 3 0.00
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (952 bp):
GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTC
TCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
AAGCGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATG
GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGG
TTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGT
GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAA
GGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCAAGCAAAAGAAAATCATC
AATATCCTTTACCTTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCA
TTACTAGAATCCATGTTTGCCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGGGAAG
AAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGG
TGCCTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAA
CTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCAT
GTATCCTAATGAAGGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGA
ATCAACGCTTGCCTTATTTAAGGGATGAATAATGATTTTATGGAAAATAGGGCAAAGGAAACATT
TCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
Found at i:184124 original size:158 final size:158
Alignment explanation
Indices: 175869--184174 Score: 1884
Period size: 159 Copynumber: 52.4 Consensus size: 158
175859 TGGGAAGAAC
* * * * * * *
175869 GCCTTTCTTGCGAAACCAAAGCGTCAATATCGTGTGTCCTTATGAGAAGACTATATTTATGGTGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* * * * *
175934 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCCTATTTAAGAGAC-AAACT
66 CTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAA-T
* **
175998 TTGATTCTATCAAAAACAGTTAAAAGAAAA
129 TTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * *
176028 GCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA-AAGGAATCTGTTCT-TGTT
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAA-GAATGTGTT-TATGGT
* * * * * * * * * *
176091 TCCCAATCACGAAATGAATGGAGATTGTTACGA-GAATCAATGTTTGCCTTATTTAAGGGATGAA
64 GCCTAATCATGAAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAA
* * *** *
176155 CTTTGATTTTAAGGAAAATA-TGGCGAATG-AAA
127 ATTTGATTCTATCAAAAATAGT-G-GAAAGAAAA
* * * * * * * *
176187 -CATTTCTAAGCAGAAGA--AAATCATCAATATCCTTTA-CCTTAATTAGGAGAATGTGTTTATA
1 GCCTTTCT-TGC-GAA-ACCAAAGCATCAATATCATGTATCC-TAATGAGAAGAATGTGTTTATG
** * * * * * *
176248 GTGCCTAATCACAAAATGAATGAAGATCCT-TACTAGA--ATCCATGTTTGACTCATTTGAG-GC
62 GTGCCTAATCATGAAATGAATGGAGAT--TGTA-T-GACTATTCACGTTTGTCTTATTTAAGAG-
* * * *
176309 AC-AAACTTAGACAT-TAT-AAAAATTGGTGGGAAG-AAA
122 ACGAAA-TTTGA-TTCTATCAAAAA-TAGTGGAAAGAAAA
* * ** * * * *
176345 GCCTTTCTTGCAAAACCAGAGTTTCAATATCGTGTATCCTTATGAGAAGATTATGTTTATGGTGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* * * * *
176410 CTAATCACGAAAAT-AATGGGGATTAGTATGACTATTCATGTTTGTCTTATTAAAGAGAC-AAGC
66 CTAATCATG-AAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAA-A
* ** **
176473 TTTGTTTCTATCAAAAACGGTTAAAAGAAAA
128 TTTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * * * *
176504 GCTTTTCTTGCCACACCAAAGCATCAATGTCATGTATCTTACT-A-AAGGGAATATGCTTT-TGG
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAA--GAATGTG-TTTATGG
* * * * * * * * * *
176566 TTCGC-AATCATGAAATGAATGGAGACTGTTATGA-GAATCAATGCTTGCCTTATTTAGGGGATG
63 TGC-CTAATCATGAAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTAAGAGACG
* * * ** *
176629 AACTATGATTTTATGGAAAATAG-GGCAAAGGAAA
125 AAATTTGATTCTATCAAAAATAGTGG-AAAGAAAA
*** * * ** * * * * * * *
176663 TATTTTCATGCAAAAGAAAATCATCAATATCATTTACCCTAATAAGGACAATGTGTTTATAGTGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* * * * * *
176728 CTAATCACGAAATGAATGAAGATCAT-TACT-ACAATTCACGTTTCTCTCATTTGAG-GCACGAA
66 CTAATCATGAAATGAATGGAGAT--TGTA-TGACTATTCACGTTTGTCTTATTTAAGAG-ACGAA
** *
176790 ATCAGACAT-TAT-AAAAATTAGTGCG-AAG-AAA
127 ATTTGA-TTCTATCAAAAA-TAGTG-GAAAGAAAA
* * * * * * *
176821 GCCTTTCTTTCAAAACCAAAGCATCAATATCATGCATCCTTATGAGAATACA-ATATTTATGGTG
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGA-ATGTGTTTATGGTG
* * * * * * * *
176885 CCTAATCTTAAAAGGAATGGGGATTAGTAAGGCTATTCACATTTGTCTTATTAAAGAGAC-AAAC
65 CCTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAA-
* ** *
176949 TTTGATTCTATAAAAAACGGTTGAAAGAAAA
128 TTTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * ** * * * * ** *
176980 GCTTTTCCTGCGACACCAAAGTGTCAATGTGAAGTATCCTAATGA-AGGGAATGCATTTTTGGT-
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTTTATGGTG
* * * ** * * * * * * *
177043 CCTCAATCATGAAAAGAATGGAGACTGGTA-CAAGAATCAATGCTTGCCATATTTAAGGGATGAA
65 CCT-AATCATGAAATGAATGGAGA-TTGTATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAA
* * ***
177107 CTTTGATTTTAAGGAAAATAG-GGCAAA-AGAAA
127 ATTTGATTCTATCAAAAATAGTGG-AAAGA-AAA
* * * ** * * * * * * *
177139 -CTTTTCCATGCAAAAAAAAATCATCAATATCATTTAACGTCATGAGGAGAATGTGTTTATAGTG
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTG
** * * * * *
177203 CCTAATCACAAAATGAATGAAGA-T-CATTACTATAATC-CTTGTTTGTCTCATTTGAG-GCAC-
65 CCTAATCATGAAATGAATGGAGATTGTATGACTAT--TCAC--GTTTGTCTTATTTAAGAG-ACG
* * *
177263 AAACTTAGACAT-TAT-AAAAATTCGTGGAAAG-AAA
125 AAA-TTTGA-TTCTATCAAAAA-TAGTGGAAAGAAAA
* ** * * * * * * *
177297 GCCTTTCTTACGAAACCAAAGTGTCAATATCGTGTATCCTTATGAGAAGACTATATTTATAGTTC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* * * *
177362 CGAATCCTGAAAAT-AATAGG-GATTAGTATGACTATTCATGTTTATCTTATTTAAGAGAC-AAA
66 CTAATCATG-AAATGAAT-GGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAA
* ** * *
177424 CTTTGATACTATCAAAAACGGTTGAAGGAAAA
128 -TTTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * *
177456 GCTTTTCCTGC-AACACCAAAGCATCAATGTC----ATCCTAATGA-AGGGAATGTGTTCT-TGG
1 GCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTT-TATGG
* * * * * * * * *
177514 TTCCCAATCATGAAAAGAATGGAGATTGTTAAGA-GAATCAACGCTTGCCTTATTTACAG-GATG
63 TGCCTAATCATGAAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTA-AGAGACG
* * *** *
177577 AACA-ATGATTTTAGGGAAAATAG-GGCAAAGGAAA
125 AA-ATTTGATTCTATCAAAAATAGTGG-AAAGAAAA
* * * ** * * * * * *
177611 -CATTTCCATGCAAAAGAAAATCATCAATACCATTTA-CCTTAATGAGGAGAATGTGTTTATAGA
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCC-TAATGAGAAGAATGTGTTTATGGT
* ** * * * * * *
177674 GCATAATCACAAAATGAATGAAGATCTTTACTAGA--ATCCATGTTTGTCTCATTTGAGATG-CG
64 GCCTAATCATGAAATGAATGGAGAT-TGTA-T-GACTATTCACGTTTGTCTTATTTAAGA-GACG
* * * * * *
177736 AACTTAGACAT-TA-AAAAAATTGGTGGCAAG-AAA
125 AAATTTGA-TTCTATCAAAAA-TAGTGGAAAGAAAA
* * * * * *
177769 GACTTTCTTGCGAAACCAAAGTC-TCAATATCGTGTATCCTTATTAGAAGACTATGTTTATGGTG
1 GCCTTTCTTGCGAAACCAAAG-CATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTG
* * * *
177833 CCTAATCCTGAAAAGAATGGAGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAAAC-AAAC
65 CCTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAA-
* ** **
177897 TTTGATTCTATCAGAAACGGTTTAAAGAAAA
128 TTTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * * *
177928 GCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTTTATGGTG
* * * * * ** * * * *
177992 CCCAATCACGAAAAGAATGGAGATTGTTATGA-GAATCAACACTTGCCTTATTTAAGGGATGAAC
65 CCTAATCATGAAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAAA
* ***
178056 TTTGATTTTAAGGAAAATA-TGGCAAATG-AAA
128 TTTGATTCTATCAAAAATAGTGG-AAA-GAAAA
* * * ** * * * * *
178087 -CATTTCTAAGCAAAAAAAAAACATCAATATCCTTTA-CCTTAATGAGGAGAATGTGTTTATAGT
1 GCCTTTCT-TGCGAAACCAAAGCATCAATATCATGTATCC-TAATGAGAAGAATGTGTTTATGGT
** * * * ** * * * * *
178150 GCCTAATCACAAAATGAATGAAGATCAT-TCTTAGAATCCATGTTTGTCTCATTT-GGGGCACGA
64 GCCTAATCATGAAATGAATGGAGAT--TGTATGACTATTCACGTTTGTCTTATTTAAGAG-ACGA
* * ** * * *
178213 ACTTAGACACTAT-AAAAATTGGTGGGACG-AAA
126 AATTTGATTCTATCAAAAA-TAGTGGAAAGAAAA
* * * * * * * *
178245 GCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATAAGAAGACTATATTTATAGTTC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* * * * * *
178310 CGAATCCTAAAAAT-AATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGAC-AAAC
66 CTAATCAT-GAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAA-
** ** * *
178373 TTTGATAGTATCAAAAACGGTTGAAGGAAAA
128 TTTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * * *
178404 GCTTTTCCTGCGACACCAAAGCATCAATGTC----ATCCAAATGA-AGGGAATGTGTTCT-TGGT
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTT-TATGGT
* * * * * * * * *
178463 TCCCAATCATGAAAAGAATGGAGATTGTTATGA-GAATCAACGCTTGCCTTATTTAAGGGATG-A
64 GCCTAATCATGAAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAA
* * ** *
178526 ATAATGATTTTATGGAAAATAG-GGTAAAGGAAA
127 AT-TTGATTCTATCAAAAATAGTGG-AAAGAAAA
** * * ** * * * * * * *
178559 -TATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAG
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTG
* * * * * * *
178623 CATAATCACT-AAATGAATGAAGATCTTTACTAGA--ATCCATGTTTGTCTCATTTGAG-GAGCG
65 CCTAATCA-TGAAATGAATGGAGAT-TGTA-T-GACTATTCACGTTTGTCTTATTTAAGAGA-CG
** * * * *
178684 AACATAGGCA-T-TATGAAAATTGGTGGGAAG-AAA
125 AA-ATTTG-ATTCTATCAAAAATAGTGGAAAGAAAA
** * * * *
178717 GCCTTTCTTGCGAAACCAAAGTGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* * * * *
178782 CTAATCTTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAA-AGA-TAAACT
66 CTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAA-T
* * ** *
178845 TTGATTATATCGAAAACGGTTGAAAGAAAA
129 TTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * * *
178875 GCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGCGAATGTGTTTTTGGTT
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTTTATGGTG
* * * * * * * * * * * * *
178939 CCCAATCACGAAAAGAATGGAGGTTGTTACGA-GAATCAATGCTTGCCTTATTTAAGGGATGAAC
65 CCTAATCATGAAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAAA
* *** *
179003 TTTGATTTTAAGGAAAATATTGGAAATG-AAA
128 TTTGATTCTATCAAAAATAGTGGAAA-GAAAA
* * * ** * * * * * * *
179034 -CATTTCTAAGCAAAAGAAAATCATCAATGTCCTTTA-CCTTAATGAGGAGAATGTGTTTTTTGT
1 GCCTTTCT-TGCGAAACCAAAGCATCAATATCATGTATCC-TAATGAGAAGAATGTGTTTATGGT
** * * ** * * * * *
179097 GCCTAATCACAAAATGAATGAAGATCAT-TATTAGAATCCATGTTTGCCTCATTTGAG-GCACGA
64 GCCTAATCATGAAATGAATGGAGAT--TGTATGACTATTCACGTTTGTCTTATTTAAGAG-ACGA
* * * *
179160 ACTTAGACAT-TAT-AAAAATTGGTAGG-AAG-AAA
126 AATTTGA-TTCTATCAAAAA-TAGT-GGAAAGAAAA
* * ** * * * * * **
179192 GCCTTTCCTGCAAAACCAAAGTGTCAATATCGTGTATTCTTATGAGAAGACTATGTTTATCATGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* * * *
179257 CTAATCATGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGAC-AAGCT
66 CTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAA-AT
** *
179321 TTGATTCTATCAAAAACGGTTGAAAGAAAA
129 TTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * * *
179351 GCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTTTATGGTG
* * * * * * * **
179415 CCCAATCATGAAAAGAATGGAGACTAT-TATGA-GAATCAACGCTAGTCTTATTTAAGGGTTG-A
65 CCTAATCATGAAATGAATGGAGA-T-TGTATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAA
* * ** *
179477 ATAATGATTTTATGGAAAATAG-GGCAAAGGAAA
127 AT-TTGATTCTATCAAAAATAGTGG-AAAGAAAA
* * * ** * * * * * * *
179510 -CATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAAGGAGGAGAATGTGTTTATAGTG
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTG
*** ** * * * * * *
179574 CCTAATCCCAAAATGAATAAAGATCTTTACTAGA--ATCCATGTTTGTCTCATTTGAG-GCACGG
65 CCTAATCATGAAATGAATGGAGAT-TGTA-T-GACTATTCACGTTTGTCTTATTTAAGAG-ACGA
* * ** * **
179636 ACTTAGACACTAT-AAAAATTGGTGGGGAG-AAA
126 AATTTGATTCTATCAAAAA-TAGTGGAAAGAAAA
** * * * * *
179668 GCCTTTCTTGCGATCCCAAAGCGTCAATATCATGTATCCGT-ATGAGAAGACTATGGTTATGGTA
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCC-TAATGAGAAGAATGTGTTTATGGTG
* * * * *
179732 ACTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGAC-AAAC
65 CCTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAA-
* ** *
179796 TTTGATTCTATCAGAAACGGTTGAAAGAAAA
128 TTTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * * * * *
179827 GCTTTTCTTGTGACACCAAAGCATTAATATCATATATCCTAATGATG-GGAATGTGTTTTTGGTT
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA-GAAGAATGTGTTTATGGTG
* * * * * * * * * *
179891 CCCAATCATGAAAAGAATGGAGACCAT-TATGA-GAGTCAACGCTTGCCTTTTTTAAGGGATG-A
65 CCTAATCATGAAATGAATGGAGA--TTGTATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAA
** * ** *
179953 ATAACGATTTTATGGAAAA-AG-GGCAAAGGAAA
127 AT-TTGATTCTATCAAAAATAGTGG-AAAGAAAA
* * * * ** * * * * ** * *
179985 -CATTTCCATACAAAAGAAAATCATCAATACCATTTACCCTAAAAAGGAGAATGTGTTTATAGTG
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTG
** * * * * * * * *
180049 CCTAATCACAAAATGAATGAAGATCTTTACTAGA--ATCCATGTTTCTCTCATTTGAG-GCAGGA
65 CCTAATCATGAAATGAATGGAGAT-TGTA-T-GACTATTCACGTTTGTCTTATTTAAGAG-ACGA
* * * * *
180111 ACTTAGACAT-TAT-AAAAATTGGTGGGAAG-AAA
126 AATTTGA-TTCTATCAAAAA-TAGTGGAAAGAAAA
* ** ** *
180143 GCCTTTCTTGCAAAACCAAAGTGTCAATATTGTGTATCCTAATGAGAA-AACTATGTTTATGGTG
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAA-TGTGTTTATGGTG
* * * * *
180207 CCTAATCATGAAAAGAATGGGGATTAGTAGGACTATTCACATTTGTCTTA-TTAAGAG-CTGAAC
65 CCTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGAC-GAAA
* ** *
180270 TTTGATTCTATCAATAACGGTTGAAAGAAAA
128 TTTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * * * * * *
180301 GCTTTTTTTGTGACACCAAAGCATCAATGTCGTGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTTTATGGTG
* * * * * * * * * * * *
180365 CCCAACCATGAAAAAGAATGGAAACTGTTACGA-GAATCAACGCTTGCCTTATTTAAGGGA-TAA
65 CCTAATCATG-AAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAA
*** * *** ** *
180428 ACAACGATTTTAGGGAAAATAGTTTAAAGGAAA
127 A-TTTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * * * * * * * *
180461 -CATTTCCATGCAAAAGCAAATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGAG
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTG
* * ** * * * * * * * *
180525 CATAATTACAAAATGAATGAAGCTCTTTACTAGA--ATCCATGTTTGTCTCATTTGAG-GCGCGA
65 CCTAATCATGAAATGAATGGAGAT-TGTA-T-GACTATTCACGTTTGTCTTATTTAAGAG-ACGA
* * * * * *
180587 ACTTAGACAT-TAT-AGAAATTGGTGGGAAG-AAA
126 AATTTGA-TTCTATCA-AAAATAGTGGAAAGAAAA
** * * * *
180619 GCCTTTCTTGCGAAACCAAAGTGTCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* * * *
180684 CTAATCCTGAAAAGAATGGGGATTAGTATGAATATTCACGTTTGTCTTA-TTAAGGAGAC-AAAC
66 CTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAA-GAGACGAAA-
* ** * *
180747 TTTAATTCTATCAAAAACGGTTGAATGAAAA
128 TTTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * *
180778 GCTTTTCTTGC-AACACCAAAGCATCAATGTCATGTATCCTTATGA-AGGGAATGTGCTTT-TGG
1 GCCTTTCTTGCGAA-ACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTG-TTTATGG
* * * * * * * * * * * *
180840 TTCGC-AATCATGAAAAGAATGAAGACTGTTATGA-GAATCAATGCTTG-CCTATTTAGGGGATG
63 TGC-CTAATCATGAAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTAAGAGACG
* * * ** *
180902 AACTATGATTTTATGGAAAATAG-GGCAAAGGAAA
125 AAATTTGATTCTATCAAAAATAGTGG-AAAGAAAA
* * * ** * * * * *
180936 -CATTTCCATGCAAAATAAAATCATCAATATCATTTATGCTAATAATG-AGAATGTGTTTATAGT
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGA-GAAGAATGTGTTTATGGT
* * * * * ** * * * *
180999 TCCTAATCA-CAAAGTGAATGAATATCGTTACCACAATTCATGTTTCTCTTATTT--GAGGCGCA
64 GCCTAATCATGAAA-TGAATGGAGATTG-TATGACTATTCACGTTTGTCTTATTTAAGAGACG--
* * *
181061 AAATTAGACTT-TAT-AAAAATTGGTGCAAAG-AAA
125 AAATTTGA-TTCTATCAAAAA-TAGTGGAAAGAAAA
** * * * * *
181094 GCCTTTCTTTTGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGCGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* * * * * * * *
181159 CTAATCCTAAAAAGAATGGGGATTAGTAAGACTATTCACATTTGACTTATTAAAGAGAC-AAACT
66 CTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAA-T
** * *
181223 TTGATTCTATCAAAAACGGTTGAAAGAACA
129 TTGATTCTATCAAAAATAGTGGAAAGAAAA
** ** * * * * ** *
181253 G-CTTGTCTTGCGACCCCAAAGTGTCAATGTGAAGT-TCCTAATGA-AGGGAATACGTTTTTGGT
1 GCCTT-TCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTTTATGGT
* * * * * * * * * * *
181315 -CCTCAATCATGAAAAGAATGGAGACTGGTACGA-GAATCAACGCTTGCCATATTTAGGGGATGA
64 GCCT-AATCATGAAATGAATGGAGA-TTGTATGACTATTC-ACGTTTGTCTTATTTAAGAGACGA
* * *** * *
181378 ACTTTGATTTTAAGGAAAATAG-GGCTACGAAAA
126 AATTTGATTCTATCAAAAATAGTGG-AAAGAAAA
* * * ** *** * * * * * *
181411 -CATTTCCATGCAAAAGAAAATTGTCAATATCCTTTACCCTAATGAGGATAATGTGTTTATAGTG
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTG
** * * * * *
181475 CCTAATCACAAAATGAATGAAGATCCT-TACTAGA--ATCCAAGTTTGTCTCATTTGAG-GCATC
65 CCTAATCATGAAATGAATGGAGAT--TGTA-T-GACTATTCACGTTTGTCTTATTTAAGAG-A-C
* * * * *
181536 GAACTTAGACAT-TA-CAAAAATTGGTGGGAAA-AACA
124 GAAATTTGA-TTCTATCAAAAA-TAGT-GGAAAGAAAA
* * * * * **
181571 -CCTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATCATGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* * * * *
181635 CAAATCTTGAAAAGAAT-AAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGAC-AAACT
66 CTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAA-T
* * * *
181698 TTGATTCTATAAAAAACAGTTGAAACAAAA
129 TTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * * * * *
181728 G-CTATTCTTACGACACCAAAGCGTCAATGTCAAGTATCCTAGTGTAG-GGAATGTGTTTTTGGT
1 GCCT-TTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATG-AGAAGAATGTGTTTATGGT
* * * * * * * * * * * * *
181791 TCCCAATCATGAAAAGAATCGAAACTGGTACGA-GAATCAACGCTTGCCTTATTTAAGGGATGAA
64 GCCTAATCATGAAATGAATGGAGA-TTGTATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAA
* * ** * *
181855 CTTTGATTTTATGGAAAATAG-GGTGAAGGAAA
127 ATTTGATTCTATCAAAAATAGTGG-AAAGAAAA
* * * ** * * * * * * * *
181887 -CATTTCCATGCTAAAAAAAATCATCAACACCATTTACCCTTATGAGGAGAATGTGTTTATAGTG
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTG
** * * * * * *
181951 CCTAATCACAAAAT-AATGAAGA-TG-ATTACTAGAATC-CTTGTTTCTCTCATTTGAG-GCAC-
65 CCTAATCATGAAATGAATGGAGATTGTATGACT--ATTCAC--GTTTGTCTTATTTAAGAG-ACG
* * * *
182010 AAACTTAGACAT-TAT-AAAAATTGGTGAAAAG-AAA
125 AAA-TTTGA-TTCTATCAAAAA-TAGTGGAAAGAAAA
* * * * * *
182044 GCCTTTCTAGCGAAATCAAAGCATCAGTATCATGTATCCTTATGAGAAGACTATGTTTATGGTGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
*** * * * * * *
182109 CTAATCCCAAAAAGAATGGGGATTAGTATGACTATTCACGTTTGCCTTGTTAAAGAGAC-AAACA
66 CTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAA-T
* * * * *
182173 TTGATTCTATTAGAAATGGTTGAAAAAAAA
129 TTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * * *
182203 GCTTTTCTTGCGACACCAAAGCATCAATGTCATGAATCCTAATGA-AGGGAATATGCTTT-TGGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTG-TTTATGG-
* * * * * * * * * *
182266 T-CCCAATCATGAAAAGAATGGAGACTGTTACGA-GAATCAATGCTTGCCTTATTTAAGAGATGA
63 TGCCTAATCATGAAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTAAGAGACGA
** * ** * ** * *
182329 ACAAAT-ATTTTATGGAAAACAACGCAAAGGAAA
126 A-ATTTGATTCTATCAAAAATAGTGGAAAGAAAA
* ** * ** * * * * * *
182362 -CATTTCCAAGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGGAGAATGTGTTTATAGTG
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTG
** * * * * * * * * *
182426 CCTAATCACAAAATGAATGAACATCTTTACTTGA--ATCCATGTTTTTCTGATTTGAG-GCGCGA
65 CCTAATCATGAAATGAATGGAGAT-TGTA--TGACTATTCACGTTTGTCTTATTTAAGAG-ACGA
* * * * * *
182488 ACTTAGA--CATTTCAAAAATTGGAGGGAA-AAAA
126 AATTTGATTC-TATCAAAAA-TAGTGGAAAGAAAA
** * * * * *
182520 GCCTTTCTTATGAAACCAAAGCGTCAATATCGTGTATCCTTATAAGAA-AACTATGTTTATGGTG
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAA-TGTGTTTATGGTG
*
182584 CCTAATCATGAGAA-GAATGG-GAATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGAC-AA
65 CCTAATCATGA-AATGAATGGAG-ATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAA
** *
182646 ACTTTGATTCTATCAAAAACGGTTGAAAGAAAA
127 A-TTTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * * *
182679 GCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTTTATGGTG
* * * * * * * ** * * *
182743 CCCAACCATGAAAAGAATGGAGACTGTTACGA-GAATCAACACTTGCCTTATTTAAGGGATGAAC
65 CCTAATCATGAAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAA-
* * *** * *
182807 A-ATGATTTTAGGGAAAATAG-GGCAAGGGAAA
127 ATTTGATTCTATCAAAAATAGTGG-AAAGAAAA
* ** * * * * * *
182838 -CATTTCCAG-GCAAAGGCAAATCATCAATACCATTTA-CGCTAATGAGGAGAATGTGTTTATAG
1 GCCTTTCTTGCG-AAA-CCAAAGCATCAATATCATGTATC-CTAATGAGAAGAATGTGTTTATGG
** * * * * * * * *
182900 TGCCTAATCACAAAATGAATGAACATCTTTACTTGA--ATCCATGTTTGTCTGATTTGAG-GCGC
63 TGCCTAATCATGAAATGAATGGAGAT-TGTA--TGACTATTCACGTTTGTCTTATTTAAGAG-AC
* * * * * *
182962 GAACTTAGA--CATTTCAAAAATTGGAGGGAA-AAAA
124 GAAATTTGATTC-TATCAAAAA-TAGTGGAAAGAAAA
** * * * *
182996 GCCTTTCTTATGAAACCAAAGCAGTCAATATCGTGTATCCTTATAAGAA-AACTATGTTTATGGT
1 GCCTTTCTTGCGAAACCAAAGCA-TCAATATCATGTATCCTAATGAGAAGAA-TGTGTTTATGGT
* *
183060 GCCTAATCATGAGAA-GAATGG-GAATTAGTATGACTATTCATGTTTGTCTTATTAAAGAGAC-A
64 GCCTAATCATGA-AATGAATGGAG-ATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGA
** *
183122 AACTTTGATTCTATCAAAAACGGTTGAAAGAAAA
126 AA-TTTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * * *
183156 GCCTTTCTTGTGACACCAAAGCATCAATGTCATGTATCCTAATGA-AGAGAATGTGTTTTTGGTT
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTTTATGGTG
* * * * * ** * * *
183220 CCCAATCATGAAAAGAATGGAGACTGTTATGA-GAATCAACACTTGCCTTTTTTAAGAGATG-AA
65 CCTAATCATGAAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAAA
* * ** *
183283 TAATGATTTTATGGAAAATAG-GGCAAAGGAAA
128 T-TTGATTCTATCAAAAATAGTGG-AAAGAAAA
* * * ** * * * * * *
183315 -CATTTCCATGCAAAAGAAAATCATCAATACCATTTATCCTAATGAGGAGAATGTGTTTGTAGTG
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTG
* * * * * * * * *
183379 TCC-AATCATAAAATGAATGAAGATCTTTACTAGA--ATCCATGTTTGTCTCATTTGAGGGATGA
65 -CCTAATCATGAAATGAATGGAGAT-TGTA-T-GACTATTCACGTTTGTCTTATTTAAGAGACGA
* * * * *
183441 ACTTAGACAT-TAT-AATAATAGGTGGGAAG-AAA
126 AATTTGA-TTCTATCAAAAATA-GTGGAAAGAAAA
* * * * * * *
183473 GCCTTTCTAGCAAAATCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* * * * * *
183538 CTAATCACGAAAGGAATGGGGATTTGTATGACTATTCACGTTTGTCATATTAAAGAGAC-AAACA
66 CTAATCATGAAATGAATGGAGA-TTGTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAA-T
* * ** *
183602 TTGATTCCATCAGAAACGGTTGAAAGAAAA
129 TTGATTCTATCAAAAATAGTGGAAAGAAAA
* * * ** * * *
183632 GCTTTTCTTGTGACACCAAAGCATCAATGCCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTTTATGGTG
* * * * * * * * *
183696 CCCAATCATG-AAGGAATGGAGACTGTTATGA-GAATCAACGCTTGCCTTATTTAAGGGATGAAT
65 CCTAATCATGAAATGAATGGAGATTG-TATGACTATTC-ACGTTTGTCTTATTTAAGAGACGAA-
* * ** * *
183759 AATT-ATTTTATGGAATATAG-GGCAAAGGAAA
127 ATTTGATTCTATCAAAAATAGTGG-AAAGAAAA
* * * ** * * * * * * *
183790 -CATTTCCATGCAAAAGAAAATCATCAATACCAT-TTTCCCTAATAAGGACAATGTGTTTATAGT
1 GCCTTT-CTTGCGAAACCAAAGCATCAATATCATGTAT-CCTAATGAGAAGAATGTGTTTATGGT
** * * *
183853 GCCTAATCACAAAATGAA-GGAAGATCT-T-T-ACTGGAATCTATGTTTGTCTCATTTAAG-G-C
64 GCCTAATCATGAAATGAATGG-AGAT-TGTATGACT--ATTC-ACGTTTGTCTTATTTAAGAGAC
* * * *
183912 GCGAATTTAGACAT-TAT-AAAAATTGGTGGGAAG-AAA
124 G-AAATTT-GA-TTCTATCAAAAA-TAGTGGAAAGAAAA
* * * * * *
183948 GCCTTCCTCGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGC
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
* *
184013 CTAATC-TGAAATGAATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACGAAATT
66 CTAATCATGAAATGAATGGAGATT-GTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAATT
* *
184077 TGATTCTATCAAAAACAGTTGAAAGAAAA
130 TGATTCTATCAAAAATAGTGGAAAGAAAA
* * ** * * * *
184106 GCTTTTCTTGCGACACCAAAGCATCGTTGTCATGTATCCTAATGA-AGGGAATGTGTTTTTGGTT
1 GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGA-AGAATGTGTTTATGGTG
184170 CCTAA
65 CCTAA
184175 CCACAAAAAG
Statistics
Matches: 5687, Mismatches: 1929, Indels: 1063
0.66 0.22 0.12
Matches are distributed among these distances:
154 28 0.00
155 180 0.03
156 52 0.01
157 275 0.05
158 2202 0.39
159 2623 0.46
160 278 0.05
161 47 0.01
162 2 0.00
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (158 bp):
GCCTTTCTTGCGAAACCAAAGCATCAATATCATGTATCCTAATGAGAAGAATGTGTTTATGGTGC
CTAATCATGAAATGAATGGAGATTGTATGACTATTCACGTTTGTCTTATTTAAGAGACGAAATTT
GATTCTATCAAAAATAGTGGAAAGAAAA
Found at i:184255 original size:28 final size:28
Alignment explanation
Indices: 184211--184944 Score: 898
Period size: 28 Copynumber: 25.8 Consensus size: 28
184201 AGAATCAACG
*
184211 ACTGGCTTGTGGGCTTTGAAAGGGTGCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
* * * * *
184239 ACTGACTTGTGGTCTTTAAAAAGATACC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
**
184267 ACTGACTTGTGGGCTTTGAAAATAGTGCC
1 ACTGACTTGTGGGCTTTG-AAAGGGTGCC
* *
184296 ACTAACTTGTGGGCTTTGAAAAGAGTGCC
1 ACTGACTTGTGGGCTTTG-AAAGGGTGCC
* * *
184325 ACTAACTTATGGGCTTTGACAGGGTGCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
* *
184353 ATTGACTTGTGGGCTTTGAAAGGGTACC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
* *
184381 ACTGACTTGTGGGCTTTAAAAAGAGTGCC
1 ACTGACTTGTGGGCTTT-GAAAGGGTGCC
184410 ACTGACTTGTGGGCTTTGAAAGGGGTGCC
1 ACTGACTTGTGGGCTTTGAAA-GGGTGCC
* *
184439 ACCGACTTGTGGGCTTTGAAAGGATGCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
*
184467 ACTGACTTGTGGGCTTTGAAAGGGTGTC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
184495 ACTGACTTGTGGGCTTTGAAAGGGTGCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
* *
184523 ACTAACTTGTGGGCTTTGAAAGGATGCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
* * *
184551 ATTGACTTGTAGGCTTTGAAAGGATGCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
*
184579 ACTGACTTGTGGGCTTTGAAAAGAGTGCC
1 ACTGACTTGTGGGCTTTG-AAAGGGTGCC
*
184608 ACT-ACTTGTGGGTTTTGAAAGGGTGCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
*
184635 ACTGACTTGTGGGCTTTGAAAAGAG-GCC
1 ACTGACTTGTGGGCTTTG-AAAGGGTGCC
*
184663 ACTGACTTGTGGGCTTTGAAAGGATGCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
*
184691 ACTGACTTGTGGGCTTTGAAAAGAGTGCC
1 ACTGACTTGTGGGCTTTG-AAAGGGTGCC
**
184720 ACTGACTTGTGGGCTTTGAAAAAG-GCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
* *
184747 ACTGACTTATGGGCTTTGAAAGGATGCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
*
184775 ACTGACTTGTGGGCTTTGAAAAGAGTGCC
1 ACTGACTTGTGGGCTTTG-AAAGGGTGCC
*
184804 ACTGACTTGTGGGCTTTGAAAAGGTGCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
* *
184832 ACTGACTTGTGGCCTTTGAAAGGATGCC
1 ACTGACTTGTGGGCTTTGAAAGGGTGCC
* * *
184860 ACCGACTTGTGGGCTTTCAAAAGAGTTGCC
1 ACTGACTTGTGGGCTTT-GAAAG-GGTGCC
* * *
184890 ACCGACTCGTGTGGGCTTTGAAAAGAGTTACC
1 ACTGACT--TGTGGGCTTTG-AAAG-GGTGCC
*
184922 ACCGACTCGTGTGGGCTTTGAAA
1 ACTGACT--TGTGGGCTTTGAAA
184945 AGATGAACGT
Statistics
Matches: 621, Mismatches: 70, Indels: 27
0.86 0.10 0.04
Matches are distributed among these distances:
27 39 0.06
28 354 0.57
29 173 0.28
30 12 0.02
31 3 0.00
32 40 0.06
ACGTcount: A:0.23, C:0.18, G:0.31, T:0.28
Consensus pattern (28 bp):
ACTGACTTGTGGGCTTTGAAAGGGTGCC
Found at i:186203 original size:11 final size:12
Alignment explanation
Indices: 186174--186203 Score: 53
Period size: 11 Copynumber: 2.6 Consensus size: 12
186164 TTTTTGTTAT
186174 TTTTTTTCTTGG
1 TTTTTTTCTTGG
186186 TTTTTTT-TTGG
1 TTTTTTTCTTGG
186197 TTTTTTT
1 TTTTTTT
186204 GCTTTTTTTT
Statistics
Matches: 18, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
11 11 0.61
12 7 0.39
ACGTcount: A:0.00, C:0.03, G:0.13, T:0.83
Consensus pattern (12 bp):
TTTTTTTCTTGG
Found at i:200145 original size:20 final size:19
Alignment explanation
Indices: 200118--200287 Score: 93
Period size: 20 Copynumber: 8.9 Consensus size: 19
200108 GAAAAAAGAC
*
200118 AAAATGTATCGATACTTTG
1 AAAATGTATCGATACATTG
* *
200137 AAGAATGTATTGATACATTC
1 AA-AATGTATCGATACATTG
* *
200157 ATACATGTATCGATAAATTG
1 A-AAATGTATCGATACATTG
200177 AAAAATGTATCGATACAATCTG
1 -AAAATGTATCGATAC-AT-TG
* ** * * *
200199 ----GGTA-AAAAAAATAG
1 AAAATGTATCGATACATTG
200213 -AA-TGTATCGATACATTG
1 AAAATGTATCGATACATTG
*
200230 AAAAATGTATCGATACATTC
1 -AAAATGTATCGATACATTG
* * *
200250 ATACATGTATCCATACATTA
1 A-AAATGTATCGATACATTG
200270 AAAATGTATCGATACATT
1 AAAATGTATCGATACATT
200288 TGGGTAAAAA
Statistics
Matches: 112, Mismatches: 27, Indels: 24
0.69 0.17 0.15
Matches are distributed among these distances:
14 1 0.01
15 2 0.02
16 5 0.04
17 8 0.07
19 20 0.18
20 70 0.62
21 4 0.04
22 2 0.02
ACGTcount: A:0.43, C:0.12, G:0.14, T:0.32
Consensus pattern (19 bp):
AAAATGTATCGATACATTG
Found at i:200247 original size:93 final size:91
Alignment explanation
Indices: 200091--200297 Score: 292
Period size: 93 Copynumber: 2.3 Consensus size: 91
200081 TTTTAACTAG
* * * * *
200091 ATGTATCGATACATCT-AG-AAAAAAGACAAAATGTATCGATACTTTGAAGAATGTATTGATACA
1 ATGTATCGATACATCTGGGTAAAAAAAACAAAATGTATCGATACATTGAAAAATGTATCGATACA
*
200154 TTCATACATGTATCGATAAATTGAAAA
66 TTCATACATGTATCCATAAATT-AAAA
* *
200181 ATGTATCGATACAATCTGGGTAAAAAAAATAGAATGTATCGATACATTGAAAAATGTATCGATAC
1 ATGTATCGATAC-ATCTGGGTAAAAAAAACAAAATGTATCGATACATTGAAAAATGTATCGATAC
*
200246 ATTCATACATGTATCCATACATTAAAA
65 ATTCATACATGTATCCATAAATTAAAA
*
200273 ATGTATCGATACATTTGGGTAAAAA
1 ATGTATCGATACATCTGGGTAAAAA
200298 TGTGACTTTT
Statistics
Matches: 104, Mismatches: 10, Indels: 5
0.87 0.08 0.04
Matches are distributed among these distances:
90 12 0.12
91 16 0.15
92 17 0.16
93 59 0.57
ACGTcount: A:0.44, C:0.12, G:0.14, T:0.30
Consensus pattern (91 bp):
ATGTATCGATACATCTGGGTAAAAAAAACAAAATGTATCGATACATTGAAAAATGTATCGATACA
TTCATACATGTATCCATAAATTAAAA
Found at i:201825 original size:476 final size:474
Alignment explanation
Indices: 200794--202593 Score: 2428
Period size: 476 Copynumber: 3.8 Consensus size: 474
200784 GGTGTCTACA
** * *
200794 GACACCAAAGTGTCAATGTGAAGTATCCTAATGAAGGGAATGCG-TTTTTGGTCCTCAATCATGA
1 GACACCAAAGCATCAATGTCAAGTATCCTAATGAAGGGAATGCGTTTTTTGTTCC-CAATCATGA
* *
200858 AAAGAATGGAGACTGGTATGAGAATCAACTGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAA
65 AAAGAATGGAGACTGGTATGAGAATCAAC-GCTTGCCTTATTTAAGGGATGAACTATGATTTTAT
** * *
200923 GGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATTGTCAATATCC-TTTACCTTATTG
129 GGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATA-CCATTTACCCTAATG
* * *
200987 AGGAAAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCCTTACTAGAATCCAAGTTTG
193 AGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTG
* *
201052 TCTCATTTGAGGCATCGAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAA
258 TCTCATTTGAGGCA-CAAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAA
* * * * *
201117 CCAAACCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATCGTGCCAAATCTTGAAAAGA
322 CCAAAGCATCAATATCGTGTATCCTTATGAAAAGACTATGTTTATAGTGCCTAATC-CGAAAAGA
** * *
201182 AT-AAGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAAAAAA
386 ATGGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATAAAAAA
* * *
201246 CGGTTGAAAAAAAAGCTATTCTTGT
451 CAGTTG-AAAAAAAGCTTTTCTTGC
* * * * *
201271 GACACCAAAGCGTCAATGTCAAGTATCCTAGTGTAGGGAATGCATTTTTGGTTCCCAATCATGAA
1 GACACCAAAGCATCAATGTCAAGTATCCTAATGAAGGGAATGCGTTTTTTGTTCCCAATCATGAA
* * *
201336 AAGAATCGAGACTGGTACTGAGAATCAACGCTTGCCTTATTTAAGGGATGAATTTTGATTTTATG
66 AAGAATGGAGACTGGTA-TGAGAATCAACGCTTGCCTTATTTAAGGGATGAACTATGATTTTATG
* * * * **
201401 GAAAATAGGGCAAAGGAAACATTTCCATGCAAAAAAAAATTATCAACATCATTTACCCTCGTGAG
130 GAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* * *
201466 GAGAATGTGTTTATAGTGCCTAATCACAAAAT-AATGAAGATGATTACTAGAATCCTTGTTTCTC
195 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTC
* * * * * *
201530 TCATTTAAGGCACAAACTTAGACATTATAGAAATTGGGGGGAATAAAGCCTTTCTTGTGAAACGA
260 TCATTTGAGGCACAAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCA
201595 AAGCATCAATATCGTGTATCCTTATGAAAAGACTATGTTTATAGTGCCTAATCCGAAAAAGAATG
325 AAGCATCAATATCGTGTATCCTTATGAAAAGACTATGTTTATAGTGCCTAATCCG-AAAAGAATG
* * *
201660 GGGATTAGTATGACTACTCACGTTTGTCATATTAAAGAGACAAACTTTGATTCTATTAAAAACAG
389 GGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATAAAAAACAG
201725 TTGAAAGAAAAGCTTTTCTTGC
454 TTGAAA-AAAAGCTTTTCTTGC
* * * * *
201747 GACACCAAAGCATCAATG-CTAGGAATCCTAATGAAGGAAATGTGTTTTTTGTTCCCAATCAAGA
1 GACACCAAAGCATCAATGTC-AAGTATCCTAATGAAGGGAATGCGTTTTTTGTTCCCAATCATGA
* * * * * * *
201811 AAAGAATTGAGACTGTTATGAGAATCATCGCTTGCCTTTTTTGATGGATGAACTATAATTTTATG
65 AAAGAATGGAGACTGGTATGAGAATCAACGCTTGCCTTATTTAAGGGATGAACTATGATTTTATG
* *
201876 AAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAT
130 GAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAG
* ** * * *
201941 GAGAATGTGTTTATAGTGCCTAGTCACGTAATGAATGAGGATCATTACTAGAATCCATGCTTGAC
195 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTC
* *
202006 TCATTTGAGGCACAAACTTAGAC-TATACAAAAATTGGTGGGAAGAAAGCCTTTCCTGCGAAACC
260 TCATTTGAGGCACAAACTTAGACAT-TATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACC
** * *
202070 AAAGTGTCAATATCATGTCTCCTTATGAAAAGACTATGTTTATAGTGCCTAATCCTGAAAAGAAT
324 AAAGCATCAATATCGTGTATCCTTATGAAAAGACTATGTTTATAGTGCCTAATCC-GAAAAGAAT
* * * *
202135 GGGGATTACTGTGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAA-T
388 GGGGATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATAAAAAACA
202199 GATTGAAAAAGAAGCTTTTCTTGC
453 G-TTGAAAAA-AAGCTTTTCTTGC
* * ** * * * *
202223 GACACCAATGCATCAATGTCATGTATCCTAACAAAGGGAATGTGTTTTTAGTTCCCAGTCTTGAA
1 GACACCAAAGCATCAATGTCAAGTATCCTAATGAAGGGAATGCGTTTTTTGTTCCCAATCATGAA
* * * *
202288 AAGAATGGAGACCGTTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTATGATTTTATGG
66 AAGAATGGAGACTGGTATGAGAATCAACGCTTGCCTTATTTAAGGGATGAACTATGATTTTATGG
* *
202353 AAAATAGGCCAAAGGAAACATTTCCTTGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
131 AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
* *
202418 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTACAGTCCATGTTTGTCT
196 AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCT
* * ** * *
202483 CCTTTGGGGCATGAACTTAGACAATATAAAAATTGTTGGGAAGAAAGCCTTTCTT-CTGAAACCA
261 CATTTGAGGCACAAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGC-GAAACCA
* * * *
202547 AAGCATCAAAAACGTGTATCCTTATGAGAAGACTATGTTTATGGTGC
325 AAGCATCAATATCGTGTATCCTTATGAAAAGACTATGTTTATAGTGC
202594 TGATGAGAAC
Statistics
Matches: 1161, Mismatches: 147, Indels: 31
0.87 0.11 0.02
Matches are distributed among these distances:
474 1 0.00
475 238 0.20
476 715 0.62
477 188 0.16
478 19 0.02
ACGTcount: A:0.36, C:0.16, G:0.19, T:0.30
Consensus pattern (474 bp):
GACACCAAAGCATCAATGTCAAGTATCCTAATGAAGGGAATGCGTTTTTTGTTCCCAATCATGAA
AAGAATGGAGACTGGTATGAGAATCAACGCTTGCCTTATTTAAGGGATGAACTATGATTTTATGG
AAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCAATACCATTTACCCTAATGAGG
AGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCT
CATTTGAGGCACAAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTGCGAAACCAA
AGCATCAATATCGTGTATCCTTATGAAAAGACTATGTTTATAGTGCCTAATCCGAAAAGAATGGG
GATTAGTATGACTATTCACGTTTGTCTTATTAAAGAGACAAACTTTGATTCTATAAAAAACAGTT
GAAAAAAAGCTTTTCTTGC
Found at i:203188 original size:327 final size:325
Alignment explanation
Indices: 202592--203245 Score: 1089
Period size: 327 Copynumber: 2.0 Consensus size: 325
202582 TGTTTATGGT
* * *
202592 GCTGATGAGAACCAAGGAAGGTCCATTGAAGACAATGACCTGAAGACGTTGGGAAGGTTTCAGGG
1 GCTGATGAAAACCAAGGAAGGTCCATTGAAGACAAAGACCTGAAGACGTTGGGAAGGTTTCAAGG
*
202657 ACCAATGACAAGGGCAAAGGCAAAGAGGATAAAGGAAGACCTAGAGAAGATGGTTGCTGCCCTAT
66 ACCAATAACAAGGGCAAAGGCAAAGAGGATAAAGGAAGACCTAGAGAAGATGGTTGCTGCCCTAT
* * *
202722 TTGAAAGTAGACCCAATTTGGAGTTAGAAGAGCCTAAGCAGGTCTATTACATATATTTGGAAGAT
131 TTGAAAGTAGACCCAATCTGGAGTTAGAAAAGCCCAAGCAGGTCTATTACATATATTTGGAAGAT
* * *
202787 ATGGGCTCCAATGGATTGAATTAGGACTTGGGTTATTTTGTAATAAAAGGCCTGCTGGTTGTGGC
196 ATGGGCTCCAATGGATTCAATTAGGACTTGGGTTATTTTGTAATAAAAGGCCTGCTAGTTGTGAC
202852 TTACTTTGGGCTTTATTTAGCATAAAAAAACTTGTTATTTGGGTTTAACTAAGAGTTGGGCTTGT
261 TTACTTTGGGCTTTATTTAGCAT--AAAAACTTGTTATTTGGGTTTAACTAAGAGTTGGGCTTGT
202917 TA
324 TA
*
202919 GCTGATGAAAACCAAGGAAGGTCCATTGAAGACAAAGACCTGAAGGCGTT-GGAAGGATTTCAAG
1 GCTGATGAAAACCAAGGAAGGTCCATTGAAGACAAAGACCTGAAGACGTTGGGAAGG-TTTCAAG
* *
202983 GACCAATAACGAGGGCAAAGGCAAAGAGGATAAAGGAAGACCTAGAGAAGATGGTTGCTGGCCTA
65 GACCAATAACAAGGGCAAAGGCAAAGAGGATAAAGGAAGACCTAGAGAAGATGGTTGCTGCCCTA
*
203048 TTTGAAAGTAGACCCAATCTGGAGTTAGAAAAGCCCAAGCTA-GT-TAATTGCATATATTTGGAA
130 TTTGAAAGTAGACCCAATCTGGAGTTAGAAAAGCCCAAGC-AGGTCT-ATTACATATATTTGGAA
*
203111 GATATGGGCTCCAATGGATTCAATTAGGACTTGGGTTATTTTGTAATAAAGGGCCTGCTAGTTGT
193 GATATGGGCTCCAATGGATTCAATTAGGACTTGGGTTATTTTGTAATAAAAGGCCTGCTAGTTGT
* *
203176 GACTTGCTTTGGGCTTTATTTAGCATAAAAACTTGTTATTTTGGTTTAACTAAGAGTTGGGCTTG
258 GACTTACTTTGGGCTTTATTTAGCATAAAAACTTGTTATTTGGGTTTAACTAAGAGTTGGGCTTG
203241 TTA
323 TTA
203244 GC
1 GC
203246 ATAATAAGCC
Statistics
Matches: 307, Mismatches: 17, Indels: 8
0.92 0.05 0.02
Matches are distributed among these distances:
325 43 0.14
326 7 0.02
327 256 0.83
328 1 0.00
ACGTcount: A:0.32, C:0.13, G:0.27, T:0.28
Consensus pattern (325 bp):
GCTGATGAAAACCAAGGAAGGTCCATTGAAGACAAAGACCTGAAGACGTTGGGAAGGTTTCAAGG
ACCAATAACAAGGGCAAAGGCAAAGAGGATAAAGGAAGACCTAGAGAAGATGGTTGCTGCCCTAT
TTGAAAGTAGACCCAATCTGGAGTTAGAAAAGCCCAAGCAGGTCTATTACATATATTTGGAAGAT
ATGGGCTCCAATGGATTCAATTAGGACTTGGGTTATTTTGTAATAAAAGGCCTGCTAGTTGTGAC
TTACTTTGGGCTTTATTTAGCATAAAAACTTGTTATTTGGGTTTAACTAAGAGTTGGGCTTGTTA
Found at i:204593 original size:42 final size:42
Alignment explanation
Indices: 204531--204659 Score: 188
Period size: 42 Copynumber: 3.1 Consensus size: 42
204521 GTAGCCCTCA
* *
204531 AAGAGAAAGAAGAGAGAGGAGGGATGATAGGAGGAGAGACAG
1 AAGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAG
* *
204573 GAGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGAGACAG
1 AAGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAG
* * *
204615 AAGAGATAATAGAGAGAGGAGGGATGACAGGAGGAG-GAGAG
1 AAGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAG
204656 AAGA
1 AAGA
204660 AGATGGAAGA
Statistics
Matches: 78, Mismatches: 9, Indels: 1
0.89 0.10 0.01
Matches are distributed among these distances:
41 8 0.10
42 70 0.90
ACGTcount: A:0.45, C:0.02, G:0.45, T:0.08
Consensus pattern (42 bp):
AAGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAG
Found at i:213760 original size:15 final size:15
Alignment explanation
Indices: 213742--213795 Score: 54
Period size: 15 Copynumber: 3.4 Consensus size: 15
213732 CTTCTTCTCT
*
213742 CCTCCTCCTGTCATC
1 CCTCCTCCTATCATC
*
213757 CCTCCTCTCTCTATTATC
1 CCT-C-CTC-CTATCATC
*
213775 TCTCCTCCTATCATC
1 CCTCCTCCTATCATC
213790 CCTCCT
1 CCTCCT
213796 ATCTCTACTA
Statistics
Matches: 31, Mismatches: 5, Indels: 6
0.74 0.12 0.14
Matches are distributed among these distances:
15 15 0.48
16 4 0.13
17 4 0.13
18 8 0.26
ACGTcount: A:0.09, C:0.50, G:0.02, T:0.39
Consensus pattern (15 bp):
CCTCCTCCTATCATC
Found at i:213779 original size:18 final size:18
Alignment explanation
Indices: 213758--213819 Score: 58
Period size: 18 Copynumber: 3.6 Consensus size: 18
213748 CCTGTCATCC
213758 CTCCTCTCTCTATTATCT
1 CTCCTCTCTCTATTATCT
* *
213776 CT-C-CTC-CTATCATCC
1 CTCCTCTCTCTATTATCT
* *
213791 CTCCTATCTCTACTATCT
1 CTCCTCTCTCTATTATCT
*
213809 CTCCTGTCTCT
1 CTCCTCTCTCT
213820 CCTCCTATCA
Statistics
Matches: 34, Mismatches: 7, Indels: 6
0.72 0.15 0.13
Matches are distributed among these distances:
15 9 0.26
16 4 0.12
17 3 0.09
18 18 0.53
ACGTcount: A:0.11, C:0.44, G:0.02, T:0.44
Consensus pattern (18 bp):
CTCCTCTCTCTATTATCT
Found at i:213789 original size:33 final size:33
Alignment explanation
Indices: 213743--213813 Score: 115
Period size: 33 Copynumber: 2.2 Consensus size: 33
213733 TTCTTCTCTC
* * *
213743 CTCCTCCTGTCATCCCTCCTCTCTCTATTATCT
1 CTCCTCCTATCATCCCTCCTATCTCTACTATCT
213776 CTCCTCCTATCATCCCTCCTATCTCTACTATCT
1 CTCCTCCTATCATCCCTCCTATCTCTACTATCT
213809 CTCCT
1 CTCCT
213814 GTCTCTCCTC
Statistics
Matches: 35, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
33 35 1.00
ACGTcount: A:0.11, C:0.46, G:0.01, T:0.41
Consensus pattern (33 bp):
CTCCTCCTATCATCCCTCCTATCTCTACTATCT
Found at i:213793 original size:12 final size:11
Alignment explanation
Indices: 213771--213842 Score: 53
Period size: 12 Copynumber: 6.5 Consensus size: 11
213761 CTCTCTCTAT
213771 TATCTCTCCTCC
1 TATCTC-CCTCC
213783 TATCATCCCTCC
1 TATC-TCCCTCC
*
213795 TATCT--CTAC
1 TATCTCCCTCC
213804 TATCT--CTCC
1 TATCTCCCTCC
*
213813 TGTCTCTCCTCC
1 TATCTC-CCTCC
213825 TATCATCCCTCC
1 TATC-TCCCTCC
*
213837 TCTCTC
1 TATCTC
213843 TTCTTTCTCT
Statistics
Matches: 50, Mismatches: 5, Indels: 11
0.76 0.08 0.17
Matches are distributed among these distances:
9 15 0.30
11 3 0.06
12 28 0.56
13 4 0.08
ACGTcount: A:0.11, C:0.47, G:0.01, T:0.40
Consensus pattern (11 bp):
TATCTCCCTCC
Found at i:213819 original size:42 final size:42
Alignment explanation
Indices: 213773--213852 Score: 133
Period size: 42 Copynumber: 1.9 Consensus size: 42
213763 CTCTCTATTA
213773 TCTCTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTG
1 TCTCTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTG
* * *
213815 TCTCTCCTCCTATCATCCCTCCTCTCTCTTCTTTCTCT
1 TCTCTCCTCCTATCATCCCTCCTATCTCTACTATCTCT
213853 TTGAGGGCTA
Statistics
Matches: 35, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
42 35 1.00
ACGTcount: A:0.09, C:0.46, G:0.01, T:0.44
Consensus pattern (42 bp):
TCTCTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTG
Found at i:216646 original size:377 final size:374
Alignment explanation
Indices: 215955--216698 Score: 1337
Period size: 377 Copynumber: 2.0 Consensus size: 374
215945 TTGTTAGCAT
* *
215955 AATAAGCCCCTTAGGGTTTATGTTAACTATGGCTTATGAGGGCATATATAAGCTCTTGTAAACAG
1 AATAAGCCCCTTAGGGTTTATGTTAACTATGGCTTATAAGGGCATATATAAACTCTTGTAAACAG
*
216020 ATTTGGAGGGGGCAGACATTGATATTTGCAGATTAAACACATTTTGTGTGAGAGTGATTCTTAGG
66 ATTTGGAAGGGGCAGACATTGATATTTGCAGATTAAACACATTTTGTGTGAGAGTGATTCTTAGG
*
216085 TTCTTGAGTGAGCCAATTTTTCTGGATCTTATCAAGAGGCCAAGACTCTTGTGGCGATCATTCCT
131 TTCTTGAGTGAGCCAATTTTTCTAGATCTTATCAAGAGGCCAAGACTCTTGTGGCGATCATTCCT
216150 TTTGGCTTATCAATCTTGTGATTGTGGCACCATCCTTCATCTCTAATCTATTCCATTTTGTTATT
196 TTTGGCTTATCAATCTTGTGATTGTGGCACCATCCTTCATCTCTAATCTATTCCATTTTGTTATT
*
216215 TTTTTCTGCTTCTTTCAATTTCTGTTCTTGCATCAATAATTCTGTTTATTGTTAGAAATCCATCT
261 TTTTTCTGCTTCTTTCAATTTCTATTCTTGCATCAATAATTCTGTTTATTGTTAGAAATCCATCT
*
216280 CAAGATCATTATTTAGGCAACCTTGGTTCATGGTTGTCATCATTAGTAC
326 CAAGATCATTATTTAGGCAACCTTGGATCATGGTTGTCATCATTAGTAC
* * *
216329 AATAAGCCTCTTAGGGTTTGTGTTAACTATGGCTTATAAGGGCATATATAAACTCTTGTAAATAG
1 AATAAGCCCCTTAGGGTTTATGTTAACTATGGCTTATAAGGGCATATATAAACTCTTGTAAACAG
216394 ATTTGGAAAGGGGCAGACATTGATATTTGCAGATTAAACACATTTTGTGTGAGAGTATGATTCTT
66 ATTTGG-AAGGGGCAGACATTGATATTTGCAGATTAAACACATTTTGTGTGAGAG--TGATTCTT
216459 AGGTTCTTGAGTGAGCCAATTTTTCTAGATCTTATCAAGAGGCCAAGACTCTTGTGGCGATCATT
128 AGGTTCTTGAGTGAGCCAATTTTTCTAGATCTTATCAAGAGGCCAAGACTCTTGTGGCGATCATT
*
216524 CCTTTTGGCTTATCAATCTTGTGATTGTGGCGCCATCCTTCATCTCTAATCTATTCCAGTTTTGT
193 CCTTTTGGCTTATCAATCTTGTGATTGTGGCACCATCCTTCATCTCTAATCTATTCCA-TTTTGT
* *
216589 TA-TTTTTTCTGCTTCTTTCAATTTCTATTCTTGCATTAATAATTTTGTTTATTGTTAGAAATCC
257 TATTTTTTTCTGCTTCTTTCAATTTCTATTCTTGCATCAATAATTCTGTTTATTGTTAGAAATCC
216653 ATCTCAAGATCATTATTTAGGCAACCTTGGATCATGGTTGTCATCA
322 ATCTCAAGATCATTATTTAGGCAACCTTGGATCATGGTTGTCATCA
216699 ATTGGCATCA
Statistics
Matches: 354, Mismatches: 12, Indels: 5
0.95 0.03 0.01
Matches are distributed among these distances:
374 66 0.19
375 47 0.13
377 233 0.66
378 8 0.02
ACGTcount: A:0.25, C:0.17, G:0.18, T:0.40
Consensus pattern (374 bp):
AATAAGCCCCTTAGGGTTTATGTTAACTATGGCTTATAAGGGCATATATAAACTCTTGTAAACAG
ATTTGGAAGGGGCAGACATTGATATTTGCAGATTAAACACATTTTGTGTGAGAGTGATTCTTAGG
TTCTTGAGTGAGCCAATTTTTCTAGATCTTATCAAGAGGCCAAGACTCTTGTGGCGATCATTCCT
TTTGGCTTATCAATCTTGTGATTGTGGCACCATCCTTCATCTCTAATCTATTCCATTTTGTTATT
TTTTTCTGCTTCTTTCAATTTCTATTCTTGCATCAATAATTCTGTTTATTGTTAGAAATCCATCT
CAAGATCATTATTTAGGCAACCTTGGATCATGGTTGTCATCATTAGTAC
Found at i:217296 original size:11 final size:9
Alignment explanation
Indices: 217271--217331 Score: 59
Period size: 9 Copynumber: 6.1 Consensus size: 9
217261 GGATGATAGG
217271 AGGAGAGAT
1 AGGAGAGAT
217280 AGGAGAGAT
1 AGGAGAGAT
*
217289 AGTAGAGAT
1 AGGAGAGAT
217298 AGGAAGGATGAT
1 AGG-A-GA-GAT
217310 AGGAGGAGACAT
1 AGGA-GAG--AT
217322 AGGAGAGAT
1 AGGAGAGAT
217331 A
1 A
217332 ATAGAGAGAG
Statistics
Matches: 45, Mismatches: 2, Indels: 10
0.79 0.04 0.18
Matches are distributed among these distances:
9 22 0.49
10 2 0.04
11 9 0.20
12 12 0.27
ACGTcount: A:0.44, C:0.02, G:0.41, T:0.13
Consensus pattern (9 bp):
AGGAGAGAT
Found at i:217297 original size:18 final size:18
Alignment explanation
Indices: 217274--217344 Score: 61
Period size: 18 Copynumber: 3.6 Consensus size: 18
217264 TGATAGGAGG
217274 AGAGATAGGAGAGATAGT
1 AGAGATAGGAGAGATAGT
*
217292 AGAGATAGGAAGGATGATAGG
1 AGAGATAGG-A-GA-GATAGT
*
217313 AGGAGACATAGGAGAGATAAT
1 A-GAG--ATAGGAGAGATAGT
*
217334 AGAGAGAGGAG
1 AGAGATAGGAG
217345 GGATGACAGG
Statistics
Matches: 43, Mismatches: 4, Indels: 12
0.73 0.07 0.20
Matches are distributed among these distances:
18 15 0.35
19 1 0.02
20 5 0.12
21 11 0.26
22 5 0.12
23 1 0.02
24 5 0.12
ACGTcount: A:0.45, C:0.01, G:0.41, T:0.13
Consensus pattern (18 bp):
AGAGATAGGAGAGATAGT
Found at i:217307 original size:42 final size:42
Alignment explanation
Indices: 217241--217356 Score: 160
Period size: 42 Copynumber: 2.8 Consensus size: 42
217231 TAGCCCTCAA
* * * *
217241 AGAGAAAGAAGAGATTGGAGGGATGATAGGAGGAGAGATAGG
1 AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGACATAGG
*
217283 AGAGATAGTAGAGATAGGAAGGATGATAGGAGGAGACATAGG
1 AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGACATAGG
* * *
217325 AGAGATAATAGAGAGAGGAGGGATGACAGGAG
1 AGAGATAGTAGAGATAGGAGGGATGATAGGAG
217357 AAGGAGAGAA
Statistics
Matches: 65, Mismatches: 9, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
42 65 1.00
ACGTcount: A:0.43, C:0.02, G:0.43, T:0.12
Consensus pattern (42 bp):
AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGACATAGG
Found at i:221933 original size:9 final size:9
Alignment explanation
Indices: 221921--221991 Score: 60
Period size: 9 Copynumber: 8.1 Consensus size: 9
221911 AAGAGATAGG
221921 AGGAGAGAT
1 AGGAGAGAT
221930 AGGAGAGACT
1 AGGAGAGA-T
221940 AGGAGAGAT
1 AGGAGAGAT
*
221949 AGTAGAGAT
1 AGGAGAGAT
* *
221958 ATGAGGGATT
1 AGGAGAGA-T
*
221968 A-TAG-G--
1 AGGAGAGAT
221973 AGGAGAGAT
1 AGGAGAGAT
221982 AGGAGAGAT
1 AGGAGAGAT
221991 A
1 A
221992 ATAGAGACAG
Statistics
Matches: 50, Mismatches: 6, Indels: 12
0.74 0.09 0.18
Matches are distributed among these distances:
5 1 0.02
6 2 0.04
7 1 0.02
8 1 0.02
9 34 0.68
10 11 0.22
ACGTcount: A:0.42, C:0.01, G:0.41, T:0.15
Consensus pattern (9 bp):
AGGAGAGAT
Found at i:221935 original size:19 final size:19
Alignment explanation
Indices: 221920--221956 Score: 56
Period size: 19 Copynumber: 1.9 Consensus size: 19
221910 GAAGAGATAG
221920 GAGGAGAGATAGGAGAGAC
1 GAGGAGAGATAGGAGAGAC
* *
221939 TAGGAGAGATAGTAGAGA
1 GAGGAGAGATAGGAGAGA
221957 TATGAGGGAT
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
19 16 1.00
ACGTcount: A:0.43, C:0.03, G:0.43, T:0.11
Consensus pattern (19 bp):
GAGGAGAGATAGGAGAGAC
Found at i:221947 original size:21 final size:21
Alignment explanation
Indices: 221903--221944 Score: 57
Period size: 21 Copynumber: 2.0 Consensus size: 21
221893 TAGCCCTCAA
221903 AGAGAAAGAAGAGATAGGAGG
1 AGAGAAAGAAGAGATAGGAGG
* *
221924 AGAGATAGGAGAGACTAGGAG
1 AGAGAAAGAAGAGA-TAGGAG
221945 AGATAGTAGA
Statistics
Matches: 18, Mismatches: 2, Indels: 1
0.86 0.10 0.05
Matches are distributed among these distances:
21 12 0.67
22 6 0.33
ACGTcount: A:0.48, C:0.02, G:0.43, T:0.07
Consensus pattern (21 bp):
AGAGAAAGAAGAGATAGGAGG
Found at i:221947 original size:40 final size:42
Alignment explanation
Indices: 221903--222020 Score: 118
Period size: 42 Copynumber: 2.9 Consensus size: 42
221893 TAGCCCTCAA
*
221903 AGAGAAAGAAGAGATAGGAGGAGA-GATAGGA-GAGA-CTAGG
1 AGAGAAAGAAGAGATAGGAGG-GATGATAGGAGGAGAGATAGG
* * * *
221943 AGAGATAGTAGAGATATGAGGGATTATAGGAGGAGAGATAGG
1 AGAGAAAGAAGAGATAGGAGGGATGATAGGAGGAGAGATAGG
* * *
221985 AGAGATAA-TAGAGACAGGAGGGATGACAGGAGGAGA
1 AGAGA-AAGAAGAGATAGGAGGGATGATAGGAGGAGA
222021 AGAGAAGAAG
Statistics
Matches: 64, Mismatches: 10, Indels: 6
0.80 0.12 0.08
Matches are distributed among these distances:
39 2 0.03
40 24 0.38
41 4 0.06
42 33 0.52
43 1 0.02
ACGTcount: A:0.44, C:0.03, G:0.42, T:0.12
Consensus pattern (42 bp):
AGAGAAAGAAGAGATAGGAGGGATGATAGGAGGAGAGATAGG
Found at i:221997 original size:42 final size:43
Alignment explanation
Indices: 221930--222020 Score: 130
Period size: 42 Copynumber: 2.1 Consensus size: 43
221920 GAGGAGAGAT
* * * * *
221930 AGGAGAGACTAGGAGAGATAGTAGAGATATGAGGGATTATAGG
1 AGGAGAGACTAGGAGAGATAATAGAGACAGGAGGGATGACAGG
221973 AGGAGAGA-TAGGAGAGATAATAGAGACAGGAGGGATGACAGG
1 AGGAGAGACTAGGAGAGATAATAGAGACAGGAGGGATGACAGG
222015 AGGAGA
1 AGGAGA
222021 AGAGAAGAAG
Statistics
Matches: 43, Mismatches: 5, Indels: 1
0.88 0.10 0.02
Matches are distributed among these distances:
42 35 0.81
43 8 0.19
ACGTcount: A:0.42, C:0.03, G:0.42, T:0.13
Consensus pattern (43 bp):
AGGAGAGACTAGGAGAGATAATAGAGACAGGAGGGATGACAGG
Found at i:227268 original size:493 final size:493
Alignment explanation
Indices: 226293--227278 Score: 1848
Period size: 493 Copynumber: 2.0 Consensus size: 493
226283 AAGGAGGGGT
*
226293 TGATGAAAACCAAGGAAGGTCCATTGAAGACAAAGACCTGAAGGCGTTGGAAGGGTTTCAAGGAC
1 TGATGAAAACCAAGGAAAGTCCATTGAAGACAAAGACCTGAAGGCGTTGGAAGGGTTTCAAGGAC
*
226358 CAATGATGAGGGCAAAGGCAAAGAGGATAAAGGAAGACCTAGAGAAGATGGTTCCTGGCCTATTT
66 CAATGACGAGGGCAAAGGCAAAGAGGATAAAGGAAGACCTAGAGAAGATGGTTCCTGGCCTATTT
226423 GAAAGTAGACCCAATTTGGAGTTAGAAGAGCCCAAGCTAGTTAATTGCATATATTTGGAAGATAT
131 GAAAGTAGACCCAATTTGGAGTTAGAAGAGCCCAAGCTAGTTAATTGCATATATTTGGAAGATAT
* *
226488 GGGCTCCAATGGATTGAATTAGGACTTGGGTTATTTTGTAATAAAAGGGCCTGCTGGTTGTGACT
196 GGGCTCCAATGGATTGAATTAGGAATCGGGTTATTTTGTAATAAAAGGGCCTGCTGGTTGTGACT
*
226553 TGCTTTGGGCTTTATTTAGCATAAAAACTTGTTATTTGGGTTTAACTAAGAGTTGGGCTTGTTAG
261 TGCTTTGGGCTTTATTTAGCATAAAAACATGTTATTTGGGTTTAACTAAGAGTTGGGCTTGTTAG
226618 CATAATAAGCCCTTAGGGTTTGTGTTAACTATGGCTTATGAGGGCATATATAAGCTCTTGTAAAC
326 CATAATAAGCCCTTAGGGTTTGTGTTAACTATGGCTTATGAGGGCATATATAAGCTCTTGTAAAC
* *
226683 AGATTTGGGTGGGGCAGACATTGATATTTGCAGATTAAACACATTTTATGTGAGAGTGTGATTCT
391 AGATTTGGATGGGGCAAACATTGATATTTGCAGATTAAACACATTTTATGTGAGAGTGTGATTCT
226748 TAGGTTCTTGAGAGAGCCAATTTTTCTGGATCTTATCA
456 TAGGTTCTTGAGAGAGCCAATTTTTCTGGATCTTATCA
*
226786 TGATGAAAACCAAGGAAATTCCATTGAAGACAAAGACCTGAAGGCGTTGGAAGGGTTTCAAGGAC
1 TGATGAAAACCAAGGAAAGTCCATTGAAGACAAAGACCTGAAGGCGTTGGAAGGGTTTCAAGGAC
*
226851 CAATGACGAGGGCAAAGGCAAAGAGGATAAAGGAAGACCTAGAGAAGATGGTTCCTGGCTTATTT
66 CAATGACGAGGGCAAAGGCAAAGAGGATAAAGGAAGACCTAGAGAAGATGGTTCCTGGCCTATTT
226916 GAAAGTAGACCCAATTTGGAGTTAGAAGAGCCCAAGCTAGTTAATTGCATATATTTGGAAGATAT
131 GAAAGTAGACCCAATTTGGAGTTAGAAGAGCCCAAGCTAGTTAATTGCATATATTTGGAAGATAT
*
226981 GGGCTCCAATGGATTGAATTAGGAATCGGGTTATTTTGTAATAAAAGGGCTTGCTGGTTGTGACT
196 GGGCTCCAATGGATTGAATTAGGAATCGGGTTATTTTGTAATAAAAGGGCCTGCTGGTTGTGACT
227046 TGCTTTGGGCTTTATTTAGCATAAAAACATGTTATTTGGGTTTAACTAAGAGTTGGGCTTGTTAG
261 TGCTTTGGGCTTTATTTAGCATAAAAACATGTTATTTGGGTTTAACTAAGAGTTGGGCTTGTTAG
227111 CATAATAAGCCCTTTAGGGTTTGTGTTAACTATGGCTTATGAGGGCATATATAAGCTCTTGTAAA
326 CATAATAAGCCC-TTAGGGTTTGTGTTAACTATGGCTTATGAGGGCATATATAAGCTCTTGTAAA
*
227176 CAGATTTGGATGGGGCAAACATTGATATTTGCAGATTAAACACATTTTGTGTGAGAGTGTGATTC
390 CAGATTTGGATGGGGCAAACATTGATATTTGCAGATTAAACACATTTTATGTGAGAGTGTGATTC
*
227241 TTAGGTTCTTGAGTGAGCCAA-TTTTCTGGATCTTATCA
455 TTAGGTTCTTGAGAGAGCCAATTTTTCTGGATCTTATCA
227279 AGAGGCCAAG
Statistics
Matches: 480, Mismatches: 12, Indels: 2
0.97 0.02 0.00
Matches are distributed among these distances:
493 346 0.72
494 134 0.28
ACGTcount: A:0.30, C:0.13, G:0.26, T:0.31
Consensus pattern (493 bp):
TGATGAAAACCAAGGAAAGTCCATTGAAGACAAAGACCTGAAGGCGTTGGAAGGGTTTCAAGGAC
CAATGACGAGGGCAAAGGCAAAGAGGATAAAGGAAGACCTAGAGAAGATGGTTCCTGGCCTATTT
GAAAGTAGACCCAATTTGGAGTTAGAAGAGCCCAAGCTAGTTAATTGCATATATTTGGAAGATAT
GGGCTCCAATGGATTGAATTAGGAATCGGGTTATTTTGTAATAAAAGGGCCTGCTGGTTGTGACT
TGCTTTGGGCTTTATTTAGCATAAAAACATGTTATTTGGGTTTAACTAAGAGTTGGGCTTGTTAG
CATAATAAGCCCTTAGGGTTTGTGTTAACTATGGCTTATGAGGGCATATATAAGCTCTTGTAAAC
AGATTTGGATGGGGCAAACATTGATATTTGCAGATTAAACACATTTTATGTGAGAGTGTGATTCT
TAGGTTCTTGAGAGAGCCAATTTTTCTGGATCTTATCA
Done.