Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2742
Parameters: 2 7 7 80 10 50 1000
Length:  31006

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1536--1617
35
2.3
37
83
8
107
52
0
1
46
1.08
9578--9627
25
2.0
25
96
0
91
30
12
34
24
1.91
13052--13097
12
3.8
12
80
8
58
45
0
0
54
0.99
13492--13606
20
5.9
20
69
18
73
46
0
2
50
1.15
14397--14445
21
2.3
22
79
10
57
42
4
6
46
1.47
15992--16024
17
2.0
17
94
5
59
66
0
0
33
0.92
19271--19309
2
19.5
2
89
0
60
48
5
0
46
1.24
19346--19379
18
1.9
17
88
5
50
55
2
0
41
1.15
21816--21873
23
2.5
22
79
20
57
60
0
1
37
1.07
22155--22187
13
2.3
15
90
10
52
42
3
3
51
1.32
22322--22362
20
2.0
20
85
0
55
63
0
0
36
0.95
22330--22418
38
2.4
38
80
12
96
58
0
0
41
0.98
22817--22851
17
2.0
18
88
5
54
42
0
2
54
1.15
23075--23106
12
2.6
13
90
9
50
65
0
0
34
0.93
24006--24067
21
3.1
21
70
22
53
48
1
0
50
1.10
24086--24136
22
2.3
22
80
6
59
56
0
0
43
0.99
24095--24134
11
3.7
11
80
6
55
62
0
0
37
0.95
24592--24633
16
2.6
16
82
10
50
40
0
0
59
0.97
25049--25116
29
2.3
29
81
13
86
35
1
0
63
1.04
25066--25149
43
1.9
43
85
7
116
42
0
0
57
0.99
25088--25195
32
3.3
33
79
15
102
43
0
0
56
0.99
25134--25180
16
2.9
16
79
14
53
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25088--25180
35
2.8
34
85
8
111
45
0
0
54
0.99
29842--29945
27
3.8
27
75
11
79
59
0
1
37
1.15

Tables:   1

The End!