Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2745
Parameters: 2 7 7 80 10 50 1000
Length:  48741

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4873--4927
21
2.5
22
80
8
60
47
0
1
50
1.11
7433--7474
2
21.0
2
100
0
84
0
50
0
50
1.00
8153--8214
25
2.5
24
72
25
58
50
0
0
50
1.00
8153--8216
24
2.6
26
72
16
64
50
0
0
50
1.00
8161--8242
25
3.1
25
70
24
62
51
0
0
48
1.00
15123--15211
30
2.9
30
83
9
92
46
2
2
49
1.26
17068--17097
15
2.0
15
100
0
60
53
20
0
26
1.46
20899--20959
29
2.2
27
85
5
77
55
0
0
44
0.99
21448--21499
22
2.5
20
76
11
52
36
1
0
61
1.07
29413--29454
18
2.5
17
82
17
52
45
2
2
50
1.27
31620--31650
14
2.2
14
94
0
53
41
0
9
48
1.36
40870--40894
2
12.5
2
100
0
50
52
0
0
48
1.00
40894--40928
2
17.5
2
93
0
61
51
0
45
2
1.16
43770--43809
2
19.5
2
94
5
71
47
0
2
50
1.14
44306--44335
16
1.9
15
93
6
51
60
0
0
40
0.97
44642--44668
3
9.0
3
100
0
54
66
0
0
33
0.92
44849--44922
31
2.4
29
79
16
78
32
0
1
66
1.00
44792--45695
488
1.8
493
84
5
1245
36
6
8
48
1.59
46402--46467
17
3.8
17
86
8
71
46
1
0
51
1.10
46427--46467
17
2.4
17
95
0
73
48
0
0
51
1.00
46452--46503
20
2.5
20
78
9
61
42
0
0
57
0.98
46424--46553
60
2.3
58
79
14
144
41
0
0
57
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46532--46565
11
3.2
11
83
8
52
29
0
0
70
0.87
46456--46565
21
5.4
20
69
20
77
36
0
0
62
1.01
46663--46700
19
2.0
19
100
0
76
78
0
21
0
0.74
46730--46807
27
3.1
23
79
17
75
30
1
2
65
1.14
46873--46910
17
2.2
17
86
13
51
47
0
5
47
1.24
48196--48305
54
2.0
54
100
0
220
60
7
5
27
1.46
48218--48291
20
4.1
18
67
25
57
62
6
5
25
1.42

Tables:   1

The End!