Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2755
Parameters: 2 7 7 80 10 50 1000
Length:  48735

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1495--1527
14
2.4
14
94
0
57
36
3
0
60
1.12
1519--1558
20
2.0
20
100
0
80
35
5
5
55
1.44
1587--1680
23
3.9
25
69
20
58
35
8
0
56
1.30
1551--1679
32
3.8
32
75
22
104
32
10
0
57
1.32
1587--1660
23
3.4
23
75
17
95
33
9
0
56
1.31
1611--1669
9
7.0
9
76
18
56
33
10
0
55
1.33
1567--1696
41
3.2
41
89
8
178
34
9
0
56
1.31
6261--6310
14
3.4
14
86
8
55
44
6
4
46
1.47
10897--10933
11
3.5
11
88
7
58
62
0
8
29
1.24
10869--10935
21
3.3
19
83
10
71
59
0
10
29
1.31
15443--15481
21
1.9
21
94
5
71
30
25
10
33
1.89
15832--15874
7
5.4
8
79
20
54
76
0
11
11
1.02
15832--15872
16
2.6
16
100
0
82
75
0
12
12
1.05
15829--15882
16
2.9
19
79
15
60
75
0
12
11
1.04
19244--19288
22
2.0
22
95
0
81
55
0
2
42
1.12
30503--30553
13
3.0
19
68
31
60
45
7
11
35
1.70
32178--32230
14
3.6
14
84
5
70
45
1
0
52
1.11
32843--32873
14
2.2
14
100
0
62
29
12
6
51
1.65
37048--37116
21
3.3
21
87
2
95
11
24
8
55
1.64
39482--39571
18
5.2
18
88
4
123
31
7
25
35
1.84
40073--40330
130
2.0
130
100
0
516
33
17
21
27
1.96
42667--42712
22
2.0
22
87
8
65
47
2
4
45
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47554--47599
17
2.7
18
81
18
62
10
82
2
4
0.89
47759--47830
1
72.0
1
90
0
108
2
94
1
1
0.39

Tables:   1

The End!