Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold331
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 1394875
ACGTcount: A:0.33, C:0.17, G:0.18, T:0.32
File 1 of 8
Found at i:5684 original size:474 final size:474
Alignment explanation
Indices: 1--18436 Score: 27636
Period size: 474 Copynumber: 38.7 Consensus size: 474
* ***
1 TTAGTCTTCCTCATAAGCGTACACGATAGTGATTGGGGGAGTTT-ATAAG-AAGC-TTCTTCCCA
1 TTAGTC-TCCTCATAAGCGTACACGATATTGA-TGGTTAAGTTTCATAAGAAAGCTTTCTTCCCA
* * *
63 CCAA-TTTGCTAAAGGC-A-GTGCGTGCCTCAAATG-GCCAACACATGGATTTCTAGTAA-GCTC
64 CCAATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAA-ACATGGA-TTCTAGTAATGATC
123 TACTTCACTTGTTGTGATTA--CAGTAGCTATAACTTATTCTCCTCCTTAGGATAAAGGGATACT
127 TACTTCAC--GTTGTGATTAGGCAGTA--TA-AACTTATTCTCCTCCTTAGGATAAA-GGATA-T
*
186 GGAT-GTTTTCTTTTTGCACTGGAAATCTTTTC-TTGCCCTATTTTCCTTAACGTC--AGTTCCT
185 GGATGGTTTTC-TTTTGCA-TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCT
* * *
247 TCCTTAAATCATGCAAAGC-TTG-TTCTCATAACAATCTTCACTCTTTTTGCGTTTGGGAACCAA
248 TCCTTAAATAAGGC-AAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAA
*
310 AAACGCTTTCCTTTCAATAGGATACA-GACA-T-ACGCTCTTTAATGGTCGCAAAGAAAAGCATT
312 AAACGCATTCCTTTCAATAGGATACACGACATTGACG--CTTTAAT-GTCGC-AAGAAAAGCATT
372 TCTTTCAAACCG-TTTTGACAGAATCAAAGTTTGTCTCTTAAAT-AGAAAAACA-GAATAGACAC
373 TCTTTC-AACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACAC
**
434 ACAAATCAACA-TCTTTTTTCAGATTAAGGCACCATACAAC
437 ACAAATCCTCATTCTTTTTT-AGATT-AGGCACCATA-AAC
* ** *
474 CTAGTCT-CTCATAAG-GTACA-G--ATTGATTTTTAGGTTTCATAAG-AA-C-TTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
* * ** *
531 -A-TTTGCCTCTAAGTCTAGGTTCGTGGCCTC-AATGTGCCAAACATGCTTTGTAGT-ATGATCT
66 AATTTTG-CT-AAAGTCTATGTTCGT-GCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCT
*
592 ACTTCACGTTTGTGATTAGGCAGTATAAAACTTATTCTCCTGCC-T-GGTTGTAAAGGATATGGA
128 ACTTCACG-TTGTGATTAGGCAGTAT-AAACTTATTCTCCT-CCTTAGG--ATAAAGGATATGGA
*
655 TGG-TTTCTTTTGC-TGGACAATCGCTTTTCTTTGCCCTATTTCTTTCTCTAAAGTCAATAGTTT
188 TGGTTTTCTTTTGCATGGA-AAT--CTTTTCTTTGCCCTA-TT-TTCCT-TAAAGTCAA-AG--T
*
718 TCCTGCCTTAAATAAGGCAAGCATTGATTTGCTCATACAATCCTCCACTATTTTACGAGATAAAC
244 TCCTTCCTTAAATAAGGCAAGC----A-TTG---AT----T-CT-CA-TA----AC-A-AT---C
* * *
783 AAATCTCACTCTTTTCGAGATTGGG-ACCAAAAACAGCAGTCACTTCTC-ATAGG-TACACGACC
285 ---T-TCACTCTTTTTGAGTTTGGGAACCAAAAAC-GCATTC-CTT-TCAATAGGATACACGA-C
* * *
845 ATTGTTTGGGGAAGCTTTAATGTCGCAAGAAAAGCATTTCTTT-AACCATTTTTCGATAGAATCA
342 A----TT---GACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTT-GACAGAATCA
* * * *
909 AAGTTTATCTC-TAAATAAGAACAACATG-ATAGACATAC-AATCCTCACTTATTTTTTTAGATT
399 AAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCA-TT-CTTTTTTAGATT
*
971 AGGCCCCATAAAAC
462 AGGCACCAT-AAAC
*
985 TT-GATCTCCT-ATAAGCGTACACCGATATTGATGTTTAAGTTTCATAAGAAAGCTGTTCCTTCC
1 TTAG-TCTCCTCATAAGCGTACA-CGATATTGATGGTTAAGTTTCATAAGAAAGCT-TT-CTTCC
* *
1048 CACCATATTTTGTCGTAAAG-CT-TGTTCGTGCCTCAAATG-GTCAAAC-TGGATTGTAGTAAAT
62 CACCA-ATTTTG-C-TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGT-AAT
1109 GATTCTACTTCGTA-GTTGTGATTAGGCAGCTATAAACTTACTTTCTCCTCCTTAGCGATTAAAG
123 GA-TCTACTTC--ACGTTGTGATTAGGCAG-TATAAACTTA--TTCTCCTCCTTAG-GA-TAAAG
*
1173 GATATGGCATGGTTTTCTTTTGCATTGGAAATC-TGTCTTTGACCCTA-TTTCCTTAAACGTC-A
180 GATATGG-ATGGTTTTCTTTTGCA-TGGAAATCTTTTCTTTG-CCCTATTTTCCTTAAA-GTCAA
* * * * *
1235 AGTTCCTTCC-TAACATAAGGCAA-CAGTGATTC-CATAACAATCTCCACTCTTTTCGGGATT--
241 AGTTCCTTCCTTAA-ATAAGGCAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGG
* * * *
1295 GAACCAAAAACACAGTCCTTTCAA-ATGATACACGACATTGACGCTTTTTAATGTCTCAAGAAAA
305 GAACCAAAAACGCATTCCTTTCAATAGGATACACGACATTGACGC--TTTAATGTCGCAAGAAAA
* * * * *
1359 GAATTTCTTTGAA-CATTTTTGATAGAATCACAAGTTTATCTCTT-AATAAGAAAAACATGAATA
368 GCATTTCTTTCAACCGTTTTTGACAGAATCA-AAGTTTGTCTCTTAAATAAGAAAAACATGAATA
* * *
1422 GCTCGCAACACAATCATCA-TCTTTTTTAGATTAGGCACCAT-AAC
432 G-ACAC-ACA-AATCCTCATTCTTTTTTAGATTAGGCACCATAAAC
*
1466 TTAGTCCTCCTCATAAGCGTACACGATATTGATTGGTTAAGTTTCATAAGAAAGC-TTCTTCACA
1 TTAGT-CTCCTCATAAGCGTACACGATATTGA-TGGTTAAGTTTCATAAGAAAGCTTTCTTCCCA
* *
1530 CCAATTTTTACTAAAG-CTCATGTTCGTG-CTCAAATGTAGCCAAACATGGATTGTAGATAATGA
64 CCAA-TTTTGCTAAAGTCT-ATGTTCGTGCCTCAAATGT-GCCAAACATGGATTCTAG-TAATGA
* *
1593 ACTA-TTCACGTTGTGTTTAGGCAGTAT-AACTTATTCTCACTCCTTAGGAATAAAGGATATGGA
125 TCTACTTCACGTTGTGATTAGGCAGTATAAACTTATTCTC-CTCCTTAGG-ATAAAGGATATGGA
1656 TGG-TTTC-TTTGCATGGAAATC-TTTCTTTGCCCTCATTCTTCCTTAAAGTCAAAGTTCCTTCC
188 TGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT-ATT-TTCCTTAAAGTCAAAGTTCCTTCC
* * *
1718 -TAAATAAAGCAAGCAATTGATTCTCATAACAATC-TCACTCTTTTCGAGATTGGGAACC-AAAA
251 TTAAATAAGGCAAGC-ATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAA
* * * *
1780 TGACTTTCCTGTCAATGATGATACAACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTC
315 CG-CATTCCTTTCAAT-AGGATAC-ACGACATTGACGCTTTAATGTCGCAAGAAAAGCA-TT-TC
* * * * * *
1845 TTTGAACCATTTTCGA-AGAATCAAAGTTTATCTCTTAAGATAAGAAAAAC-TAGAATCG-CATA
375 TTTCAACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAA-ATAAGAAAAACAT-GAATAGACACA
1907 CAAATCCTCA-T-TTTTTTAGATTAGGC-CCAT-AAC
438 CAAATCCTCATTCTTTTTTAGATTAGGCACCATAAAC
* *
1940 TTAGTCT--TCATGAAACGTACACGATATTGATGG-TAA-TTAGT-ATAAGAAGCAGCTTCTTTT
1 TTAGTCTCCTCAT-AAGCGTACACGATATTGATGGTTAAGTT--TCATAAGAA--AGCTT-TCTT
*
2000 CCCACCAA-TTTGCTAAAGTCTATGTT-GTGCCTCTCAAA-GTGCC-AAC---GAATCTAGTAAT
60 CCCACCAATTTTGCTAAAGTCTATGTTCGTG-C-CTCAAATGTGCCAAACATGGATTCTAGTAAT
*
2058 GATCTACTTCACGTTGTGATTAGGCAG--TAAACTTATTCTCCTCCTT-GGA-GAAGGATTATGG
123 GATCTACTTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGA-TATGG
* *
2119 ATGGTTTTCTTTTTGCATGGAAATCGTTTGCTTTGCCCTAGTTTTCCTTAACGTGCAAGAGTTCC
187 ATGGTTTTC-TTTTGCATGGAAATC-TTTTCTTTGCCCTA-TTTTCCTTAAAGT-CAA-AGTTCC
*
2184 TTCC-TAAATCAGGC-AGCATTGATTCTCATAACAATCTTTCA-TCTTTTTGAG-TTGGGAACCA
247 TTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATC-TTCACTCTTTTTGAGTTTGGGAACCA
*
2245 AAAACGCTTTGCCTTTCAATAGGATATTCACTGACA-TGACGCTTTAATGTCGCAAGAAAAGCAA
311 AAAACGCATT-CCTTTCAATAGGATA--CAC-GACATTGACGCTTTAATGTCGCAAGAAAAGC-A
*
2309 TTTCTTTCAACCG-TTTTGACAGAATCAAAGTTTGTCTCTTAAAATAAGAGAAACATGAAT-GAG
371 TTTCTTTCAACCGTTTTTGACAGAATCAAAGTTTGTCTCTT-AAATAAGAAAAACATGAATAGA-
2372 CACACAAATCC-CATTCTTTTTTAGATTAGGCCACCATAAAC
434 CACACAAATCCTCATTCTTTTTTAGATTAGG-CACCATAAAC
*
2413 TTAGTTCTCCCTTCATAATCGTTACACGATATTG-TGGTTAA-TTTCATAAGAAAGC-TTCTT-C
1 TTAG-TCT-CC-TCATAAGCG-TACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCC
*
2474 CACCAATTTTGCTAAAGTCTAGGTTCGCTGCCTC-AATGTGGCCCAAAC-TGGATTCTAGTAATG
62 CACCAATTTTGCTAAAGTCTATGTTCG-TGCCTCAAATGT-G-CCAAACATGGATTCTAGTAATG
* *
2537 A--TACTTCACGTTGTGATTAGACAGTA-AAACTTATTCTCCT-CTT-CGAT-AAGGATATGGAT
124 ATCTACTTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGAT
* *
2596 GGTTTTCTGTTGCATGGAAATCTTTTC-TTGTCCCTTTTTTCCTTAAAGT-AAAGTTCCTTCCTT
189 GGTTTTCTTTTGCATGGAAATCTTTTCTTTG-CCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTT
* * * * *
2659 AACATAAGGCACGCATTGATTCTCATAAC-ATGTCCAC-CTTTTTCGTGATTGCGAGAACCAAAA
253 AA-ATAAGGCAAGCATTGATTCTCATAACAATCTTCACTCTTTTT-GAGTTTG-G-GAACCAAAA
* * *
2722 ACGACAGTCC-TTCAAT-TGATACACGAC-TTGACGCTTTAATTCGCCGCAAGAAAAGCATTTCT
314 ACG-CATTCCTTTCAATAGGATACACGACATTGACGCTTTAA-T-GTCGCAAGAAAAGCATTTCT
* * * * * *
2784 TATGCAACCATTTTTGATAGAATCAAA-TTTATCT-AT-AATAA-AGAAAACATGAATAGACGCG
376 T-T-CAACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATAAGA-AAAACATGAATAGACACA
*
2845 CAAATCCTCA-TCTTTTTTAGAGATAGGCACCATAAAC
438 CAAATCCTCATTCTTTTTTAGA-TTAGGCACCATAAAC
* *
2882 TTAAG-CTTCCTCATAAGCGTACAACGAT-TTGATGGCTTACGTTTCTATCAGAAAGCTTTCTCT
1 TT-AGTC-TCCTCATAAGCGTAC-ACGATATTGATGG-TTAAGTTTC-ATAAGAAAGCTTTCT-T
* * * *
2945 CCTTCCACCAAATTTTTGCTACAGTCTCTGTTCGTGCCTC-ACTGTGCTCAAACATGGATTGTAG
60 -C--CCACC-AA-TTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGC-CAAACATGGATTCTAG
*
3009 TAATG-TCTACTTCACGTTGTGATTAGGCAGT-TAAAC-TATTATCTCTCCTTAGGATAAAGGAT
119 TAATGATCTACTTCACGTTGTGATTAGGCAGTATAAACTTATTCTC-CTCCTTAGGATAAAGGAT
* * * * *
3071 ATGGAT-CTTCTCTTTTGCCATGGAAATCTTTTCTTTGCCTCGATTTGT-CGTAGAGTCAAAGTT
183 ATGGATGGTTTTCTTTTG-CATGGAAATCTTTTCTTTGCC-CTATTT-TCCTTAAAGTCAAAGTT
*
3134 CCTTCCTTAATAGGCAAGGCAAGGCATTGGATTCTCATAACAATCTTCACTC-TTTTGAGTTTTG
245 CCTTCCTTAA-A--TAAGGCAA-GCATT-GATTCTCATAACAATCTTCACTCTTTTTGAG-TTTG
* *
3198 GGAACCAACAACGCTATTCCATTCAAATA-GATACACGACA-TGAACTGCTTTAAAAATGTCGAC
304 GGAACCAAAAACGC-ATTCCTTTC-AATAGGATACACGACATTG-AC-GCTTT---AATGTCG-C
* *
3261 AACG-AAAGCCTTTCTTTCAACCGTTTTTAACAGAATC-AAG-TT-T-TCTTAAAT-A-AAAAAC
361 AA-GAAAAGCATTTCTTTCAACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATAAGAAAAAC
3319 AT-ACATAAGACACACACAATCCTC-TTCGATTTTTTAGATTAGGCA-CATGAAAC
425 ATGA-AT-AGACACACA-AATCCTCATTC--TTTTTTAGATTAGGCACCAT-AAAC
3372 TTAGTCTCCTCATAAGACGTACACGATA-TGATGGTTAA--TTCATAAGCAAAGC-TTCTTCCCA
1 TTAGTCTCCTCATAAG-CGTACACGATATTGATGGTTAAGTTTCATAAG-AAAGCTTTCTTCCCA
* * *
3433 CCAAATTTACT-AAGTCTA-G-TCGTGCCTCAAATGTGCCAAACATGGATTGGTAGTAATGATCT
64 CCAATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATT-CTAGTAATG----
* *
3495 ACGTCCACTACTTCACATTGTGGGATTAGGCCG-ATTAAA-TTATTCTCC-CCTT-GGATAAAGG
124 A--T---CTACTTCACGTTGT--GATTAGGCAGTA-TAAACTTATTCTCCTCCTTAGGATAAAGG
*
3556 ATATGGAT-GTGTTCTTTTGCATGGAAATCTTCGTTCTTTGCCCTATTGTTCCTTAAA-TCAAAG
181 ATATGGATGGTTTTCTTTTGCATGGAAATCTT--TTCTTTGCCCTATT-TTCCTTAAAGTCAAAG
*
3619 TTCCTCCTTCCTTATAAT-CGGCCAA--ATTGATTCTCATAACAATCTTCACTC--TTTGAG-TT
243 -T--TCCTTCCTTA-AATAAGG-CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTT
* *
3678 GGG-ACCAAAAAAGCTCTTTCCTTTCAATAGGATACACGACA-TGACGC-TTAATGTCGCAAGAA
303 GGGAACC-AAAAA-CGCATTCCTTTCAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAA
* * * * * *
3740 AAGCCCATTTCTTTGAACCATTTTCAGAATAGAAATCAAAGTTTATCTCTTAAAATAGGAGAAAA
366 AAG--CATTTCTTTCAACCGTTTT-TG-ACAG-AATCAAAGTTTGTCTCTT-AAATAAGA-AAAA
*
3805 CATGAATAGACATACAAA-CCTCCATTC-TTTTTAGATT-GGCACCAATAAAC
424 CATGAATAGACACACAAATCCT-CATTCTTTTTTAGATTAGGCACC-ATAAAC
* * * *
3855 TGAGTCTCCTCATAAGCGTACACGATATGGATGGTTAA-TTTCGT-AGAACAAGCTTTCTTCTTC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAG-A-AAGCTTTCTTC-CC
* *
3918 ACCAATTTTGCCTGAAGTC-ATGTATTCGTGCCT--AATGTGCCAAACAATGGAGTCTAGTAA-G
63 ACCAATTTTG-CTAAAGTCTATG--TTCGTGCCTCAAATGTGCCAAAC-ATGGATTCTAGTAATG
* **
3979 ATCTACATCACG-TGTGCGT-GGCAGTATTAAACTTATTCTCCTCCTTAGGATAAAGGATATGTG
124 ATCTACTTCACGTTGTGATTAGGCAGTA-TAAACTTATTCTCCTCCTTAGGATAAAGGATATG-G
*
4042 ATGG-TTTCTTTTGCAT-GAAATCGTTTCTTTGCCCTA--TTCCTTAAAGTCAAAGTTCCTTCGC
187 ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTC-C
* *
4103 TTAAATCAGGCAAGCCATTGTTAATTCTCATAACAATCTGTCCCTC-TTTTGAGTTTGGGAA-CA
251 TTAAATAAGGCAAG-CATTG---ATTCTCATAACAATCT-TCACTCTTTTTGAGTTTGGGAACCA
*
4166 AAAACGCCTTTCCTTTCAATAGGATA-ACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTCT
311 AAAACG-CATTCCTTTCAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCA---T
* *
4230 TTCATTCAACCGTTTTTTGACAGAATCAAAGTTTGTCTTCTGAAATAAGAAAAAACATG-ATAGA
372 TTCTTTCAACCG-TTTTTGACAGAATCAAAGTTTGTC-TCTTAAATAAG-AAAAACATGAATAGA
4294 CACA-AAATCCT-ATTCTTTTTATAG-TTAGGCACCATAAAC
434 CACACAAATCCTCATTCTTTTT-TAGATTAGGCACCATAAAC
* *
4333 GTAG-CGCCTCATAAAGCGTACACGATATTGATGGTTAAG-TTCATAAGAAAGCTTTCTTCCCAC
1 TTAGTCTCCTCAT-AAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCAC
*
4396 CAATTTTGCTAAAGTCTGATGTTCGTGCCTCAAAATGTGCC-AACATGGGATTGTAGTAAAATGA
65 CAATTTTGCTAAAGTCT-ATGTTCGTGCCTC-AAATGTGCCAAACAT-GGATTCTAGT--AATGA
*
4460 TCTACTTCACGATGTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTATGATAAAGGATATGGA
125 TCTACTTCACG-T-TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGG-
4525 ATGCGTTTTC-TTTGCATGG-AA-CTTTTCTTTGCCCTATTTTCCCTTAAAGTCAAAG-TCCTTC
187 ATG-GTTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTT-CCTTAAAGTCAAAGTTCCTTC
* * *
4586 CTTCAATAAGGCAAGCA-TGATTCTCATAA-ACATCTCCAC-CTTTGTTTCGAGATTGGGAACCA
250 CTTAAATAAGGCAAGCATTGATTCTCATAACA-ATCTTCACTC-TT-TTT-GAGTTTGGGAACCA
* *
4648 AAAATGCTTTCCTTTC-ATAGGATACACGACATATGACGCTTTAATGTCCGCAAGAAAAGCA-TT
311 AAAACGCATTCCTTTCAATAGGATACACGACAT-TGACGCTTTAATGT-CGCAAGAAAAGCATTT
* * * * * * *
4711 CTTTGAACCATTTTCGATAGAATCAAAGGTTTATCTACTTAAATATG-AAACCATGGAAATAGAC
374 CTTTCAACCGTTTTTGACAGAATCAAA-GTTTGTCT-CTTAAATAAGAAAAACAT-G-AATAGAC
* *
4775 AAACAAATCATCATTCTTTTTTTAGATTAGGC-CCAT-AAC
435 ACACAAATCCTCATTC-TTTTTTAGATTAGGCACCATAAAC
* *
4814 TTAGTCTCCTCATAAGCATACACGATATTGATTGTTAAGTTTTCATAAGAAAGCTTTCTTCCCA-
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAG-TTTCATAAGAAAGCTTTCTTCCCAC
* *
4878 -ATTTTTGCTACAAGTCTA-G-TCGTGCCTC-AATGTGCCAAAACATGGATTCTAGTATTGATCT
65 CAATTTTGCTA-AAGTCTATGTTCGTGCCTCAAATGTGCC-AAACATGGATTCTAGTAATGATCT
* *
4939 AACTTCACGTTGTG-CT--GCAGTATAAAATCTTATTCTCCTCCATAGGATAAA-GATATGGATG
128 -ACTTCACGTTGTGATTAGGCAGTAT-AAA-CTTATTCTCCTCCTTAGGATAAAGGATATGGATG
5000 GTTTTCTTTTG-ATGGAAATCTTTTCTTTGCCCTATTTTCTCTT-AAGTCAAAGTTCCTT-CTTA
190 GTTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTC-CTTAAAGTCAAAGTTCCTTCCTTA
* *
5062 AATCAGGC-AGCAATTGCTT-TC-TCAACAATCTTGCACTCATTTTTGAG-TTGGGAACCAAAAA
254 AATAAGGCAAGC-ATTGATTCTCAT-AACAATCTT-CACTC-TTTTTGAGTTTGGGAACCAAAAA
* * *
5123 CGCTTTCCTTTC-ATAGGATA-ACGACATGGGACGCTTTAAATGTCGCAA-ACCAAGCATTTCTT
315 CGCATTCCTTTCAATAGGATACACGACAT-TGACGCTTT-AATGTCGCAAGA-AAAGCATTTCTT
* * * * * *
5185 TGAACCATTTTCGATAGAATCAAAGTTTATCTCTTAAATAAGAAAAACATGAATAGACATACAAA
377 TCAACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAA
5250 TCCTCATTCTTTTTTAGATTAGGCACCATAAAC
442 TCCTCATTCTTTTTTAGATTAGGCACCATAAAC
5283 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
5348 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
5413 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
5478 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
5543 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
5608 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
5673 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
5738 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
5757 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
5822 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
5887 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
5952 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
6017 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAG-TTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
6081 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
*
6146 CAGAATCAAAGTTTTTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
6211 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
6230 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
6295 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
6360 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
6425 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
6490 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
* *
6555 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTGAACCATTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
* *
6620 TAGAATCAAAGTTTATCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
6685 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
6704 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
6769 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
6834 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
6899 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
6964 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
7029 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
* *
7094 CAGAATCAAAGTTTTTCTCTTAAATAAGAAAAACATGAATAGACGCACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
*
7159 TAGGTTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
7178 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
7243 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
7308 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
7373 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
7438 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
7503 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
7568 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
7633 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
7652 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
7717 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
7782 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
7847 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
* * * * *
7912 CAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACAGTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
* *
7977 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTGAACCATTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
* * *
8042 TAGAATCAAAGTTTATCTCTTAAATAAGAAAAACATGAATAGACTGCACAAATCCTCATTCTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGAC-ACACAAATCCTCATTCTTTT
8107 TTAGATTAGGCACCATAAAC
455 TTAGATTAGGCACCATAAAC
8127 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
8192 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
8257 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
8322 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
8387 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
8452 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
*
8517 CAGAATCAAAGTTTTTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
8582 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
8601 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
8666 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
8731 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
8796 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
8861 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
8926 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
8991 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
9056 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
9075 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
9140 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
9205 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
9270 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
9335 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAG-TTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
9399 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
* *
9464 CAGAATCAAAGTTTTTCTCTTAAATAAGAAAAACATGAATAGACGCACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
9529 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
9548 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
*
9613 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTGTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
9678 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
9743 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
9808 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAG-TTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
*
9872 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTTAACCAGTTTTTG
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACC-GTTTTTG
*
9937 ACTAGAATCAAAGTTTATCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTT
390 AC-AGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTT
10002 TTTAGATTAGGCACCATAAAC
454 TTTAGATTAGGCACCATAAAC
10023 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
10088 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
10153 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
10218 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
10283 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
10348 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
10413 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
10478 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
10497 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
10562 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
10627 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
10692 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
* * * * *
10757 CAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACAGTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
* *
10822 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTGAACCATTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
* *
10887 TAGAATCAAAGTTTATCTCTTAAATAAGAAAAACATGAATAGACAGCACAAATCCTCATTCTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACA-CACAAATCCTCATTCTTTT
10952 TTAGATTAGGCACCATAAAC
455 TTAGATTAGGCACCATAAAC
10972 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
11037 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
11102 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
11167 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
11232 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
11297 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
*
11362 CAGAATCAAAGTTTTTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
11427 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
11446 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
11511 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
11576 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
11641 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
11706 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
11771 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
11836 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
11901 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
11920 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
11985 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
12050 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
12115 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
* * * * *
12180 CAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACAGTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
* *
12245 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTGAACCATTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
* *
12310 TAGAATCAAAGTTTATCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
12375 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
12394 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
12459 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
12524 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
12589 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
12654 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
12719 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
*
12784 CAGAATCAAAGTTTTTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
12849 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
12868 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
12933 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
12998 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
13063 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
13128 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
13193 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
*
13258 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACGCACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
13323 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
13342 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
13407 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
13472 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
13537 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
* * * * *
13602 CAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACAGTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
* * *
13667 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTGAACCATTTTCGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
* * *
13732 TAGAATCAAAGTTTATCTCTTAAATAAGAAAAACATGAATAGACATACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
13797 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
13816 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
13881 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
13946 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
*
14011 TTTTGCATGGAAATCTTTTCTGTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
14076 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
14141 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
14206 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
14271 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
14290 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
14355 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
14420 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
14485 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
14550 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
14615 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
*
14680 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACGCACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
14745 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
14764 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
*
14829 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTGTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
14894 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
*
14959 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATCAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
15024 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCC-TT
15089 TCAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTG
325 TCAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTG
* *
15154 ACAGAATCAAAGTTTGTCTATTAAATAAGAAAAACATGAATAGACGCACAAATCCTCATTCTTTT
390 ACAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTT
15219 TTAGATTAGGCACCAT-AAC
455 TTAGATTAGGCACCATAAAC
*
15238 TTAGTCTTCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
*
15303 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTGTAGTAATGATCTACT
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
15368 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
131 TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
15433 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
196 TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
*
15498 CAAGCATTGATTCTCATAACAATATTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
261 CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
15563 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
326 CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
** * *
15628 TTGAATCAAATTTTGTCTCTTAAATAAGACAAACATGAATAGACACACAAATCCTCATTCTTTTT
391 CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
15693 TAGATTAGGCACCATAAAC
456 TAGATTAGGCACCATAAAC
15712 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
* ** * *
15777 AATTTTGGTAAAAACTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCCAGTAATGATCTTCA
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTAC-
* * * *
15842 TTCACATTGTGATTAGGCAGTATAAACTTATTTTCCTCCTTAGGATAAATGATATGGATGATTTT
130 TTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTT
* * * * * * * *
15907 CTATTGCCTGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATGAC
195 CTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAG
* * * * * * * * * *
15972 GCAAGCATTGATTCTCGTAATAGTATCCACTCTTTTCGCGATTGGGAACAAAAAAACACATTCCT
260 GCAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAAC-CAAAAACGCATTCCT
* * * * * * * *
16037 TTC-ATTGTGATACACAACATTGATGCTTTGATGTCGCAGGAAAAGCTTTTCTTCCAACCTTTTT
324 TTCAATAG-GATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTT
* * * * * * * *
16101 TGATAGAATCAAATTTTCTCTCTTAAATAAGACAAACATGAGTAGTCACACTAATCCTCATTATT
388 TGACAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTT
*
16166 TTTTAGATTAGTCACCATAAAC
453 TTTTAGATTAGGCACCATAAAC
16188 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
* * *
16253 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCCAGTAATGATCTTCA
66 AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTAC-
* * ** *
16318 TTCACATTGTGATTAGGCAGTATAAACTTATTTTCCTCCTTAGGATAAATAATATGGATGATTTT
130 TTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTT
* * * * * * *
16383 CTATTGCCTGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATCCCTTAAATAAG
195 CTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAG
** * * * * *
16448 GCAAGCATTGATTCTCGCAACAGTC-TCTACTCTTTTCGAGATTAGGAACCAAAAACACATTCCT
260 GCAAGCATTGATTCTCATAACAATCTTC-ACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCT
* * * * *
16512 TTCAATAGGATACACGACATTGATGCTTTGATGCCGCAAGAAAAGCTTTTCTTTCAACAGTTTTT
324 TTCAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTT
* ** * * *
16577 GATAGAATCAAAGTTTGTCTCTTAAATAAGACGAACATGAATAGTCACAGAAATCCTTATTCTTT
389 GACAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTT
** *
16642 TTGGGATTAGGCACCATAGAC
454 TTTAGATTAGGCACCATAAAC
* * ** * *
16663 TTAGTCTTCTCATAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCTC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAA-GCTTTCTTCCCAC
* * * * *
16728 CAATTTTGGTAAA-TCTATGTTCCTGCCTCAAATGTGACAAACATGGATTGTCGTAATGATCTTC
65 CAATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATC-T-
* * *
16792 AC-TCACGTTATGATTAGGCAGTATAAACTTA-T-T-CTCCTT---ATAAATGATATGGATGATT
128 ACTTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTT
* * * *
16850 TTCTTTTGCATGGAAATCTTTTCCTTGCCCTATTTTCCTTAAAATCGAAGTTCATTCCTTAAATA
193 TTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATA
* * * * * * *
16915 TGGCAAGCATTAATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTTC
258 AGGCAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCC
* * * *
16980 TTTCAATAGGATACGCGACATTGACGCTTTGATGTAGCAAGAAAAGCATTTCTTTCAGCCGTTTT
323 TTTCAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTT
* * * *
17045 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATTCTCATTCTT
388 TGACAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTT
* *
17110 TTTTGGATTTGGCACCATAAAC
453 TTTTAGATTAGGCACCATAAAC
* * * * ** *
17132 TTAGTCTTCTCATAAGCATACATGATATTGATAGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCAC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAA-GCTTTCTTCCCAC
* * * * * * *
17197 CAATTTTGGTAAAGTCTATGTTCTTGCCTCAAATGCGACAAACATGGATTGTAGTAATAATCTTC
65 CAATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTAC
* * * * *
17262 ATTCACATTGTGATTAGGCAGTATAAACTTATTCTGCTCATTAGGATAAATGATATGGATGATTT
130 -TTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTT
* * * *
17327 TCCTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCCTAAATAA
194 TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAA
* * * *
17392 GGCAAGCATTGATTCTCATAACAATCTCCACCCTTTTCT-AGATTGGGAACCAAAAACACATTCC
259 GGCAAGCATTGATTCTCATAACAATCTTCACTCTTTT-TGAGTTTGGGAACCAAAAACGCATTCC
* ** * *
17456 TTTTAATAGGATACGTGACATTGATGCTTTAATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTT
323 TTTCAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTT
** * * * *
17521 TGATGGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACAGAAATCCTTATTCTT
388 TGACAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTT
* *
17586 TTTTGGATTAGGCACCATAAAT
453 TTTTAGATTAGGCACCATAAAC
* * * * * * ** * *
17608 TTATTCTTCTCATAAGCATGCACGATTTTCATGGTTTGGTTTCGTAAGAAAAGCTTTCTTCCCGC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAG-AAAGCTTTCTTCCCAC
* * * * * * * *
17673 CAATTTTGGTAAAGTCTAAGTTCATTCCTCAATTGTGACAAACATGGATTCTAGTAATGGTCTTC
65 CAATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTAC
** * * * * * * *
17738 ATTCATTTTGTGATAAGGCACTATAAACGTATTCTTCTCTTTAGGATAAATGATATGGATGATTT
130 -TTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTT
* **
17803 TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA-TTCAAATCCTTAAATA
194 TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTC-CTTCCTTAAATA
* * * * ** * *
17867 AGGCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTCGACATTGGGATCCAAAAACACATTCC
258 AGGCAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCC
** * * * * * *
17932 TTTCAATAGGATATGCAACATTGATGCTTTGATATTGCAAGAAAAGCATTTCTTCCAACCGTTTT
323 TTTCAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTT
* * * ** *
17997 TGATAGAATCAAAGTTTGTCTTTTAAATATGACTAACATGAATAGTCACACAAATCCTCATTCTT
388 TGACAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTT
*
18062 TTTTGGATTAGGCACCATAAAC
453 TTTTAGATTAGGCACCATAAAC
* * * * ** ** * *
18084 TTAGTCTTCTTATAAGCATACATGATATTGATCATTTGGTTTCGTAAGAAAGGCTTTCTTCTCAC
1 TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAA-GCTTTCTTCCCAC
* * * * * *
18149 CAATTTTGGTAAAGTCTAAGTTCATGCCTCAATTGTAG-CAAACATGGATTGTAGTAATGATCTT
65 CAATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGT-GCCAAACATGGATTCTAGTAATGATCTA
* * * * * * * *
18213 CATTTACGTTGTGATTAGGCACTATAAAC-AAGGTCTTCCT-ATTAGGATAAATGATATTGATGA
129 C-TTCACGTTGTGATTAGGCAGTATAAACTTA-TTC-TCCTCCTTAGGATAAAGGATATGGATGG
* * * * * *
18276 TTGTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTTCTTAAAATCATA-TTCATCCCTTAAA
191 TTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAA
* * * ** ** **
18340 TAAGGCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTCAACATTGGGAACCAAAAACAAATT
256 TAAGGCAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATT
* * *
18405 CCTTTCATTAGGATATATGACATTGACGCTTT
321 CCTTTCAATAGGATACACGACATTGACGCTTT
18437 GGTGTCGTAA
Statistics
Matches: 16792, Mismatches: 655, Indels: 1030
0.91 0.04 0.06
Matches are distributed among these distances:
463 9 0.00
464 13 0.00
465 17 0.00
466 50 0.00
467 125 0.01
468 201 0.01
469 589 0.04
470 254 0.02
471 205 0.01
472 222 0.01
473 1388 0.08
474 7534 0.45
475 2149 0.13
476 1612 0.10
477 192 0.01
478 231 0.01
479 191 0.01
480 195 0.01
481 245 0.01
482 131 0.01
483 232 0.01
484 77 0.00
485 40 0.00
486 89 0.01
487 102 0.01
488 79 0.00
489 84 0.01
490 84 0.01
491 25 0.00
492 15 0.00
493 3 0.00
494 1 0.00
495 2 0.00
496 1 0.00
497 4 0.00
498 1 0.00
499 2 0.00
500 1 0.00
503 12 0.00
504 27 0.00
505 10 0.00
506 5 0.00
507 1 0.00
509 4 0.00
510 16 0.00
511 76 0.00
512 20 0.00
513 13 0.00
514 3 0.00
515 3 0.00
516 20 0.00
517 2 0.00
518 1 0.00
519 4 0.00
520 27 0.00
521 20 0.00
522 16 0.00
523 37 0.00
524 21 0.00
525 11 0.00
526 20 0.00
527 11 0.00
528 10 0.00
529 3 0.00
530 4 0.00
ACGTcount: A:0.30, C:0.20, G:0.15, T:0.35
Consensus pattern (474 bp):
TTAGTCTCCTCATAAGCGTACACGATATTGATGGTTAAGTTTCATAAGAAAGCTTTCTTCCCACC
AATTTTGCTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTACT
TCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAAGGATATGGATGGTTTTC
TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATAAGG
CAAGCATTGATTCTCATAACAATCTTCACTCTTTTTGAGTTTGGGAACCAAAAACGCATTCCTTT
CAATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGA
CAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATAGACACACAAATCCTCATTCTTTTT
TAGATTAGGCACCATAAAC
Found at i:19351 original size:476 final size:476
Alignment explanation
Indices: 18450--23178 Score: 6680
Period size: 476 Copynumber: 10.0 Consensus size: 476
18440 GTCGTAAAAA
* * * *
18450 AAGACAAACATGAATTGTCATACTAATCCAT-ATTCTTTTTAGGATTAGGCACCATAAACTTAGT
1 AAGACAAACATGAATAGTCACACAAATCC-TCATTCTTTTTTGGATTAGGCACCATAAACTTAGT
* ** * * * * * *
18514 TTTCTCATAAAAACACACGATATTGA-AGCTTGGCCTTCTTAAGAAAGGCTTTCTTCCCCCCAAT
65 CTTCTCATAAGCATACACGATATTGATGGTTTGG-TTTCGTAAGAAAGGCTTTCTTCCCACCAAT
* * ** ** *
18578 TTTGGCAGAGTCTATGTTCACGCCTCAAATGTGACAAACATGGATTGGAGTAATGATCTTCGTTC
129 TTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTC
*
18643 ACATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCCT
194 ACATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTT
* * *
18708 TTGAATGGAAATCTTTTCTTTGCACTATTTTCCTTAAAATCAAAGTTCATTCCCTAAATAAGGCA
259 TTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCA
* *
18773 AGCATTGATTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACCAAAAAAACATTCCTTTCA
324 AGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCA
* * * *
18838 ATAGGATACGCAATATTGATGCTTTAATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATA
389 ATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATA
18903 GAATCAAAGTTTGTCTCTTAAAT
454 GAATCAAAGTTTGTCTCTTAAAT
* * * * * *
18926 AAGACAAACGTGAATAGTCATAGAAATCCTTATTCGTTTTTGGATTAGGCACCATAAAATTAGTC
1 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
*
18991 TTCTCATAAGCATACACGATATTGATGGTTGGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
66 TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
* * * * * * * * *
19056 CGGTAAAGTGTAAGTTCGTGCCTCAATTGCGACAAACTTGGATTCTAATAATGGTCTTCATTCAT
131 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
* * * * * * *
19121 TTTGTGATTCGGCACTATAAA-TGTATTCTACTCATGAGGATAAATGATATTGATGATTTTCTTT
196 ATTGTGATTAGGCAGTATAAACT-TATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTT
* * * * * * *
19185 TGCGTGAAAATCTTTTCTTTGCCCTACTTTCCTTAAAATCAAATTTAACTCCTTAAAAAAGGCAA
260 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAA
* * * *
19250 GCATTGATTCTCGTAACAGTCTCCACTTTTTTCGAGATTGGGAACCAGAAACACATTCCTTTCAA
325 GCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAA
* * * * *
19315 TAGGATATGCGACATTGACACTTTGATGTCGCAAGAAAAGTATTTCTTCCAACCGTTTTTGATAG
390 TAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAG
19380 AATCAAAGTTTGTCTCTTAAAT
455 AATCAAAGTTTGTCTCTTAAAT
* * *
19402 AAGACAAATATGAATAGTCATACAAATCCTCATTCTTTTTTAGATTAGGCACCATAAACTTAGTC
1 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
*
19467 TTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
66 TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
* *
19532 TGGTAAAGTCTATGTTCCTGCCTCAAATGTGACAAACATGGATTGTAGTAATGATCTTCACTT-A
131 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA-TTCA
*
19596 CGTTGTGATTAGGCAGTATAAACTTATTCTCCT-C-----ATAAATGATATGGATGATTTTCTTT
195 CATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTT
* *
19655 TGCATGGAAATCTTTTCTTTGCCCTATTTTTCTTAAAATCAAAGTTAATTCCTTAAATAAGGCAA
260 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAA
19720 GCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAA
325 GCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAA
*
19785 TAGGATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAG
390 TAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAG
*
19850 AATTAAAGTTTGTCTCTTAAAT
455 AATCAAAGTTTGTCTCTTAAAT
*
19872 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCAAAAACTTAGTC
1 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
* * * *
19937 TTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGCCTTTCTTCTCACCTATTT
66 TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
* * *
20002 TGGTAAAGTCTATGTTCCTGCCTCAAATGTGACAAACATGGATTGTAGTAATGATCTTCATTCAT
131 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
* *
20067 ATTGTGATTAGGCAGTATAAACTTATTTTGCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
196 ATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
* * *
20132 GCATGGAAAACTTTTCTTCGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGACAAG
261 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAG
* * * * * * * *
20197 CACTGATTCACATAACAATCTCCATTTTTTTCAAGATTAGGAGCCAAAAACACATTCTTTTCAAT
326 CATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAAT
* *
20262 AGGATACGCGACATTGATGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGA
391 AGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGA
20327 ATCAAAGTTTGTCTCTTAAAT
456 ATCAAAGTTTGTCTCTTAAAT
* ** * * * * * *
20348 AAAATGAACATGAATAGCCACCCTAATCCTCATTCTTTTCTAGATTAGGCACCATAAACTTATTC
1 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
* * * *
20413 TTCTCATAAGGATACACAATATTGATCGTTTGGTTTTGTAAGAAAGGCTTTCTTCCCACCAATTT
66 TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
* * * * * * * *
20478 CGGTAAAGTGTAAGTTCATGCCTCAATTGCGACAAACATGGATTCTAGTAATGGTCTTCATTCAT
131 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
* * * * * *
20543 TTTGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTT
196 ATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
* * * * *
20608 GCATGCAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCGAATTTAATTCCTTAAATAAAGCAAG
261 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAG
* * * * *
20673 CATTGATTCTCGTAACAGTCTCCACTCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATT
326 CATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAAT
* * * * *
20738 AGGATACACAACATTGATGCTTTGATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGA
391 AGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGA
* *
20803 ATGAATGTTTGTCTCTTAAAT
456 ATCAAAGTTTGTCTCTTAAAT
* *
20824 AAGACAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTC
1 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
* * * *
20889 TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CCACCAATTT
66 TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
* * * *
20952 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACAAGCATTCTAGTAATG-----GATTCAC
131 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
* * *
21012 GTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGCTATTGATGATTTTCTTTT
196 ATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
* * *
21077 GCTTGGAAATCTTTTCTTTGCCCTTTTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAG
261 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAG
*
21142 CATTGATTCTCATAATAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAAT
326 CATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAAT
* * * * * *
21207 AGGATATGCAACTTTGACGCTTTAATGTTGCAAGAAAAGTATTTCTTTCAACCATTTTTGATAGA
391 AGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGA
21272 ATCAAAGTTTGTCTCTTAAAT
456 ATCAAAGTTTGTCTCTTAAAT
* * *
21293 AAGACAAACATGAGTAGTTACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
1 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
* *
21358 TTCTCAT-----T---C----TT--T--TTTGGTTTTGTAAGAAA-GCTTTCTTCTCACCAATTT
66 TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
* * ** *
21406 TGGTAAAGTCTACGTTCGTGCCACAAATGTGACAAACATGGATTCTAGTGGTGA-C--CTTTCAC
131 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
* *
21468 TTTGTGATTGGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
196 ATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
*
21533 GCATGGAAATCTTTTCTTTGCCCTATTTTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAG
261 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAG
* * * *
21598 CATTGATTCTCGTAACAGTCTCCACTCTTTTCGAGATT-GG-A--AAAAGCACATTCCTTTCATT
326 CATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAAT
* * *
21659 AGGATACGAGACATTGACGCTTTAAGGTCGCATGAAAAGCATTTCTTTCAACCGTTTTTGATAGA
391 AGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGA
*
21724 ATCAAAGTTTGTCTCCTAAAT
456 ATCAAAGTTTGTCTCTTAAAT
* * * * ** *
21745 AAGACAAAGATGAATAGTCATAGAAATCCTTATT-TTTTTCAGATTAGGCACCATAAACTTAGTA
1 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
* * * *
21809 TTCTCATAAGCATACACGATATTGATAGATTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTT
66 TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
** * * * * * * *
21874 TGGCCAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCAC
131 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
*
21939 ATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATAATATGGATGATTTTCTTTT
196 ATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
*
22004 GCAAGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAG
261 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAG
* * * *
22069 CATTGATTCTCATAGCAATCTCCACTCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAAT
326 CATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAAT
* * *
22134 AGGATACGCGATATTGATGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACTGTTTTTGATAGA
391 AGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGA
22199 ATCAAAGTTTGTCTCTTAAAT
456 ATCAAAGTTTGTCTCTTAAAT
* * * *
22220 AAAACAAACATGAATAGTCATAGAAATCCTCATTCTTTTTTGGATTCGGCACCATAAACTTAGTC
1 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
*
22285 TTCTCATAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTT
66 TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
*
22349 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCAC
131 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
*
22414 ATTGTGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
196 ATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
* *
22479 GCATGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATCAAAGTTCATT-CTTGAAATAAGTCAA
261 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTT-AAATAAGGCAA
* * *
22543 GCATTGATTCTCATAACAATCTCCACGCTTTTCAAGGTTGGGAACCAAAAACACATTCCTTTCAA
325 GCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAA
* * * * * *
22608 TAAGATACGCAACATTGACGCTTTAATGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAG
390 TAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAG
*
22673 AATGAAAGTTTGTCTCTTAAAT
455 AATCAAAGTTTGTCTCTTAAAT
* *
22695 AAGACAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTC
1 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
* * * * ** *
22760 TTCTCATAAGGACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTT
66 TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
* * * *
22823 TGGTAAAGTCTATGTTCGTGCCTTAAATGTGCCAAACATGCATTCTAGTAATG-----GATTCAC
131 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
*
22883 GTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
196 ATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
* * * *
22948 GCTTGGAAATCTTTTCTTTGCCCTATTTTCTTTAAAATCAAAGTTCGTTCCTTAAATAAGTCAAG
261 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAG
* *
23013 CATTGATTCTCATAACAATCTCCACTCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAAT
326 CATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAAT
* * *
23078 AGGATATGCGACATTGACACTTTAATTTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGA
391 AGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGA
*
23143 ATCAAAGCTTGTCTCTTAAAT
456 ATCAAAGTTTGTCTCTTAAAT
*
23164 AAAACAAACATGAAT
1 AAGACAAACATGAAT
23179 TGATGAAAAC
Statistics
Matches: 3782, Mismatches: 427, Indels: 95
0.88 0.10 0.02
Matches are distributed among these distances:
451 34 0.01
452 121 0.03
453 19 0.01
454 57 0.02
455 3 0.00
456 163 0.04
457 2 0.00
459 1 0.00
461 1 0.00
463 2 0.00
464 1 0.00
465 1 0.00
467 14 0.00
468 60 0.02
469 600 0.16
470 441 0.12
471 167 0.04
472 2 0.00
473 1 0.00
474 119 0.03
475 565 0.15
476 1401 0.37
477 7 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (476 bp):
AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTT
TGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
ATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTT
GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAG
CATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAAT
AGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGA
ATCAAAGTTTGTCTCTTAAAT
Found at i:20063 original size:158 final size:158
Alignment explanation
Indices: 19398--20979 Score: 407
Period size: 159 Copynumber: 10.0 Consensus size: 158
19388 TTTGTCTCTT
* * * * *
19398 AAATAAGACAAATATGAATAGTCATACA-AATCCTCATTCTTTTTT-AGATTAGGCACCATAAAC
1 AAATAAGACAAACATGGATTGTCATA-ATAATCTTCATTCTTTTTTGAGATTAGGCACCAAAAAC
* * *
19461 TTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCAC
65 TTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGCAAGAAAGCCTTTCTT-TCAC
* *
19526 CAATTTTGGTAAAGTCTATGTTCCTGCCTC
129 CTATTTTGGTAAAGTCTAAGTTCCTGCCTC
** * ** * ** *
19556 AAATGTGACAAACATGGATTGT-AGTAATGATCTTCA--CTTACGTTGTGATTAGGCAGTATAAA
1 AAATAAGACAAACATGGATTGTCA-TAATAATCTTCATTCTT-TTTTGAGATTAGGCACCAAAAA
* * * * ** * * * *
19618 CTTA---TTCTCCT---CATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGC
64 CTTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGCA-AGAAAGCCTTTCTTT-C
** * * ** * *
19677 -CCTATTTTTCTTAAAATCAAAGTTAATTCCTT
127 ACCTA-TTTTGGTAAAGTCTAAGTTCCTGCCTC
* * * * * * * * * * *
19709 AAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC-TTTTCGAGATTGGGAACCAAAAACA
1 AAATAAGACAAACATGGATTGTCATAATAATCTTCATTCTTTTTTGAGATTAGGCACCAAAAACT
* * * ** * * * * * *
19773 CATTCCTT-TCA-ATAGGATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCA
66 TAGT-CTTCTCATA-AGCATACATGATATTGATGGTTTGGTTTCGCAAG-AAAGCCTTTCTTTC-
* *
19836 ACCGT-TTTTGATAGAA-T-TAAAGTT--TGTCTCTT
127 ACC-TATTTTGGTA-AAGTCT-AAGTTCCTG-C-CTC
* * * *
19868 AAATAAGACAAACATGAATAGTCACACA-AATCCTCATTCTTTTTTG-GATTAGGCACCAAAAAC
1 AAATAAGACAAACATGGATTGTCATA-ATAATCTTCATTCTTTTTTGAGATTAGGCACCAAAAAC
*
19931 TTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGCCTTTCTTCTCAC
65 TTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGCAAGAAAGCCTTTCTT-TCAC
*
19996 CTATTTTGGTAAAGTCTATGTTCCTGCCTC
129 CTATTTTGGTAAAGTCTAAGTTCCTGCCTC
** * * * * ** *
20026 AAATGTGACAAACATGGATTGT-AGTAATGATCTTCATTC-ATATTGTGATTAGGCAGTATAAAC
1 AAATAAGACAAACATGGATTGTCA-TAATAATCTTCATTCTTTTTTGAGATTAGGCACCAAAAAC
* * * * * * * ** * * * *
20089 TTA-TTTTGCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAAACTTTTC-TTCG
65 TTAGTCTT-CTCATAAGCATACATGATATTGATGGTTTGGTTTCGCA-AGAAAGCCTTTCTTTC-
* ** * * * * *
20152 CCCTATTTTCCTTAAAATCAAAGTTCATTCCTT
127 ACCTATTTT-GGTAAAGTCTAAGTTCCTGCCTC
* ** * * **
20185 AAATAAGACAAGCACT-GATTCACATAACAATCTCCATT-TTTTTCAAGATTAGG-AGCCAAAAA
1 AAATAAGACAAACA-TGGATTGTCATAATAATCTTCATTCTTTTTTGAGATTAGGCA-CCAAAAA
** * * * ** * * ** * *
20247 CACATTCTTTTCA-ATAGGATACGCGACATTGATGCTTTAATGTCGCAAGAAAAGCATTTCTTTC
64 CTTAGTCTTCTCATA-AGCATACATGATATTGATGGTTTGGTTTCGCAAG-AAAGCCTTTCTTTC
* * *
20311 AACC-ATTTTTGATAGAA-TCAAAGTT--TGTCTCTT
127 -ACCTA-TTTTGGTA-AAGTCTAAGTTCCTG-C-CTC
* ** * * * *** * * *
20344 AAATAAAATGAACATGAATAGCCACCCTAATCCTCATTCTTTTCT-AGATTAGGCACCATAAACT
1 AAATAAGACAAACATGGATTGTCATAATAATCTTCATTCTTTTTTGAGATTAGGCACCAAAAACT
* * ** * * * * *
20408 TATTCTTCTCATAAGGATACACAATATTGATCGTTTGGTTTTGTAAGAAAGGCTTTCTTCCCACC
66 TAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGCAAGAAAGCCTTTCTT-TCACC
* * * *
20473 AATTTCGGTAAAGTGTAAGTTCATGCCTC
130 TATTTTGGTAAAGTCTAAGTTCCTGCCTC
* ** * ** * * ** *
20502 AATTGCGACAAACATGGATTCT-AGTAATGGTCTTCATTC-ATTTTGTGATTAGGCATTATAAAC
1 AAATAAGACAAACATGGATTGTCA-TAATAATCTTCATTCTTTTTTGAGATTAGGCACCAAAAAC
* * * * * * ** * * * *
20565 GTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGCAAATCTTTTCTTTGC-
65 TTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGCAAG-AAAGCCTTTCTTT-CA
** * * * ** * *
20629 CCTATTTTCCTTAAAATCGAATTTAATTCCTT
128 CCTATTTT-GGTAAAGTCTAAGTTCCTGCCTC
* * * * * * * * ** * * *
20661 AAATAA-AGCAAGCATTGATTCTCGTAACAGTCTCCACTC-TTTTCAAGATTGGGAACAAAAAAC
1 AAATAAGA-CAAACATGGATTGTCATAATAATCTTCATTCTTTTTTGAGATTAGGCACCAAAAAC
** * * * ** * * * * * *
20724 ACATTCCTT-TCATTAGGATACACAACATTGATGCTTTGATGTCGCAAGAAAAGCATTTCTTCCA
65 TTAGT-CTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGCAAG-AAAGCCTTTCTTTC-
* * *
20788 ACCGT-TTTTGATAGAA-T-GAATGTT--TGTCTCTT
127 ACC-TATTTTGGTA-AAGTCTAA-GTTCCTG-C-CTC
* * * * * * *
20820 AAATAAGACAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTG-GATTAGGCACCATAAACT
1 AAATAAGACAAACATGGATTGTCATAATAATCTTCATTCTTTTTTGAGATTAGGCACCAAAAACT
* ** * * * * *
20884 TAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCATAAGTATG-CTTTCATCCACCA
66 TAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGCAAGAAAGCCTTTCTTTCACCT
* *
20948 ATTTTGGTAAAGTCTATGTTCGTGCCTC
131 ATTTTGGTAAAGTCTAAGTTCCTGCCTC
20976 AAAT
1 AAAT
20980 GTGCCAAACA
Statistics
Matches: 995, Mismatches: 342, Indels: 176
0.66 0.23 0.12
Matches are distributed among these distances:
152 26 0.03
153 69 0.07
154 2 0.00
155 9 0.01
156 25 0.03
157 38 0.04
158 282 0.28
159 489 0.49
160 53 0.05
161 2 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (158 bp):
AAATAAGACAAACATGGATTGTCATAATAATCTTCATTCTTTTTTGAGATTAGGCACCAAAAACT
TAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGCAAGAAAGCCTTTCTTTCACCT
ATTTTGGTAAAGTCTAAGTTCCTGCCTC
Found at i:20292 original size:946 final size:945
Alignment explanation
Indices: 18444--23178 Score: 6594
Period size: 946 Copynumber: 5.0 Consensus size: 945
18434 TTTGGTGTCG
* *
18444 TAAAAAAAGACAAACATGAATTGTCATACTAATCCAT-ATTC-TTTTTAGGATTAGGCACCATAA
1 TAAATAAA-ACAAACATGAATAGTCATACTAATCC-TCATTCTTTTTTA-GATTAGGCACCATAA
* ** * * * * *
18507 ACTTAGTTTTCTCATAAAAACACACGATATTGA-AGCTTGGCCTTCTTAAGAAAGGCTTTCTTCC
63 ACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGG-TTTCGTAAGAAAGGCTTTCTTCC
* * * **
18571 CCCCAATTTTGGCAGAGTCTATGTTCAC-GCCTCAAATGTGACAAACATGGATTGGAGTAATGAT
127 CACCAATTTTGGTAAAGTCTATGTTC-CTGCCTCAAATGTGACAAACATGGATTCTAGTAATGAT
*
18635 CTTCGTTCACATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATG
191 CTTCATTCACATTGTGATTAGGCAGTATAAACTTATTCTCCTCC----GATAAATGATATGGATG
* * * *
18700 ATTTTCCTTTGAATGGAAATCTTTTCTTTGCACTATTTTCCTTAAAATCAAAGTTCATTCCCTAA
252 ATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAA
*
18765 ATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACCAAAAAAACAT
317 ATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACCAAAAACACAT
* * *
18830 TCCTTTCAATAGGATACGCAATATTGATGCTTTAATGTTGCAAGAAAAGCATTTCTTTCAACCGT
382 TCCTTTCAATAGGATACGCAACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGT
* * * *
18895 TTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACGTGAATAGTCATAGAAATCCTTATT
447 TTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACAAAAATCCTCATT
* * *
18960 CGTTTTTGGATTAGGCACCATAAAATTAGTCTTCTCATAAGCATACACGATATTGATGGTTGGGT
512 CCTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGT
* * * * *
19025 TTCGTAAGAAAGGCTTTCTTCCCACCAATTTCGGTAAAGTGTAAGTTCGTGCCTCAATTGCGACA
577 TTCGTAAGAAA-GCTTTCTT-CCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACA
* * * * * * *
19090 AACTTGGATTCTAATAATGGTCTTCATTCATTTTGTGATTCGGCACTATAAA-TGTATTCTACTC
640 AACATGGATTCTAGTAATGATCTTCATTCA-ATTGTGATTAGGCAGTATAAACT-TATTCTCCTC
* * * * * *
19154 ATGAGGATAAATGATATTGATGATTTTCTTTTGCGTGAAAATCTTTTCTTTGCCCTACTTTCCTT
703 CTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTT
* * * * * * *
19219 AAAATCAAATTTAACTCCTTAAAAAAGGCAAGCATTGATTCTCGTAACAGTCTCCACTTTTTTCG
768 AAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCG
* * *
19284 AGATTGGGAACCAGAAACACATTCCTTTCAATAGGATATGCGACATTGACACTTTGATGTCGCAA
833 AGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGACGCTTTAATGTCGCAA
* *
19349 GAAAAGTATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
898 GAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
* * *
19397 TAAATAAGACAAATATGAATAGTCATACAAATCCTCATTCTTTTTTAGATTAGGCACCATAAACT
1 TAAATAAAACAAACATGAATAGTCATACTAATCCTCATTCTTTTTTAGATTAGGCACCATAAACT
*
19462 TAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACC
66 TAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACC
*
19527 AATTTTGGTAAAGTCTATGTTCCTGCCTCAAATGTGACAAACATGGATTGTAGTAATGATCTTCA
131 AATTTTGGTAAAGTCTATGTTCCTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
*
19592 CTT-ACGTTGTGATTAGGCAGTATAAACTTATTCTCCT-C-ATAAATGATATGGATGATTTTCTT
196 -TTCACATTGTGATTAGGCAGTATAAACTTATTCTCCTCCGATAAATGATATGGATGATTTTCTT
* *
19654 TTGCATGGAAATCTTTTCTTTGCCCTATTTTTCTTAAAATCAAAGTTAATTCCTTAAATAAGGCA
260 TTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCA
*
19719 AGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCA
325 AGCATTGATTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCA
* *
19784 ATAGGATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATA
390 ATAGGATACGCAACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATA
* * *
19849 GAATTAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTG
455 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTG
* *
19914 GATTAGGCACCAAAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAG
520 GATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAG
* *
19979 AAAGCCTTTCTTCTCACCTATTTTGGTAAAGTCTATGTTCCTGCCTCAAATGTGACAAACATGGA
585 AAAG-CTTTCTTC-CACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGA
* * *
20044 TTGTAGTAATGATCTTCATTCATATTGTGATTAGGCAGTATAAACTTATTTTGCTCCTTAGGATA
648 TTCTAGTAATGATCTTCATTCA-ATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATA
* *
20109 AATGATATGGATGATTTTCTTTTGCATGGAAAACTTTTCTTCGCCCTATTTTCCTTAAAATCAAA
712 AATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * * * * * *
20174 GTTCATTCCTTAAATAAGACAAGCACTGATTCACATAACAATCTCCATTTTTTTCAAGATTAGGA
777 GTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGA
* * * *
20239 GCCAAAAACACATTCTTTTCAATAGGATACGCGACATTGATGCTTTAATGTCGCAAGAAAAGCAT
842 ACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGACGCTTTAATGTCGCAAGAAAAGCAT
*
20304 TTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCT
907 TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
** * ** *
20343 TAAATAAAATGAACATGAATAGCCACCCTAATCCTCATTCTTTTCTAGATTAGGCACCATAAACT
1 TAAATAAAACAAACATGAATAGTCATACTAATCCTCATTCTTTTTTAGATTAGGCACCATAAACT
* * * * *
20408 TATTCTTCTCATAAGGATACACAATATTGATCGTTTGGTTTTGTAAGAAAGGCTTTCTTCCCACC
66 TAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACC
* * * * * * *
20473 AATTTCGGTAAAGTGTAAGTTCATGCCTCAATTGCGACAAACATGGATTCTAGTAATGGTCTTCA
131 AATTTTGGTAAAGTCTATGTTCCTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
** * * ** *
20538 TTCATTTTGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTT
196 TTCACATTGTGATTAGGCAGTATAAACTTATTC-TC-C--TCCGATAAATGATATGGATGATTTT
* * * * *
20603 CTTTTGCATGCAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCGAATTTAATTCCTTAAATAAA
257 CTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAG
* * *
20668 GCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTCAAGATTGGGAACAAAAAACACATTCCTT
322 GCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTT
* * * * *
20733 TCATTAGGATACACAACATTGATGCTTTGATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTG
387 TCAATAGGATACGCAACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTG
* *
20798 ATAGAATGAATGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACAAAAATCCTCATTCCTTT
452 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACAAAAATCCTCATTCCTTT
*
20863 TTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCAT
517 TTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGT
* * * * * *
20928 AAGTATGCTTTCATCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACAAGC
582 AAGAAAGCTTTCTTCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGG
*
20993 ATTCTAGTAATGGA--TTCA--C-GTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGAT
647 ATTCTAGTAAT-GATCTTCATTCAATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGAT
* * * *
21053 AAATGCTATTGATGATTTTCTTTTGCTTGGAAATCTTTTCTTTGCCCTTTTTTCCTTAAAATCAA
711 AAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAA
* *
21118 AGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAATAATCTCCACTCTTTTCGAGATTGGG
776 AGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGG
* * * *
21183 AACCAAAAACACATTCCTTTCAATAGGATATGCAACTTTGACGCTTTAATGTTGCAAGAAAAGTA
841 AACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGACGCTTTAATGTCGCAAGAAAAGCA
*
21248 TTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCT
906 TTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
* * * * *
21288 TAAATAAGACAAACATGAGTAGTTACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACT
1 TAAATAAAACAAACATGAATAGTCATACTAATCCTCATTCTTTTTTAGATTAGGCACCATAAACT
* *
21353 TAGTCTTCTCAT-----T---C----TT--T--TTTGGTTTTGTAAGAAA-GCTTTCTTCTCACC
66 TAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACC
* * * ** *
21401 AATTTTGGTAAAGTCTACGTTCGTGCCACAAATGTGACAAACATGGATTCTAGTGGTGA-C--CT
131 AATTTTGGTAAAGTCTATGTTCCTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
* *
21463 TTCACTTTGTGATTGGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTT
196 TTCACATTGTGATTAGGCAGTATAAACTTATTCTCCTCC----GATAAATGATATGGATGATTTT
*
21528 CTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCATAAAATCAAAGTTCATTCCTTAAATAAG
257 CTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAG
* * * *
21593 GCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTCGAGATT-GG-A--AAAAGCACATTCCTT
322 GCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTT
* * *
21654 TCATTAGGATACG-AGACATTGACGCTTTAAGGTCGCATGAAAAGCATTTCTTTCAACCGTTTTT
387 TCAATAGGATACGCA-ACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTT
* * * * *
21718 GATAGAATCAAAGTTTGTCTCCTAAATAAGACAAAGATGAATAGTCATAGAAATCCTTATT--TT
451 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACAAAAATCCTCATTCCTT
* * * *
21781 TTTCAGATTAGGCACCATAAACTTAGTATTCTCATAAGCATACACGATATTGATAGATTGGTTTC
516 TTT-GGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTC
* * ** * *
21846 GAAAGAAAGGCTTTTTTCCCACCAATTTTGGCCAAGTCTATGTTCATGCCTCAAATGTGACAAAT
580 GTAAGAAA-GCTTTCTT-CCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAAC
* * * * *
21911 AGGGATTGTGGTATTGATCTTCTTTCACATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTA
643 ATGGATTCTAGTAATGATCTTCATTCA-ATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTA
* *
21976 GGATAAATAATATGGATGATTTTCTTTTGCAAGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAA
707 GGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAA
* *
22041 TCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCACTCTTTACGAGAT
772 TCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGAT
* * * * *
22106 TGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAATGTCGCAAGAAA
837 TGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGACGCTTTAATGTCGCAAGAAA
*
22171 AGCATTTCTTTCAACTGTTTTTGATAGAATCAAAGTTTGTCTCT
902 AGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
** * *
22215 TAAATAAAACAAACATGAATAGTCATAGAAATCCTCATTCTTTTTTGGATTCGGCACCATAAACT
1 TAAATAAAACAAACATGAATAGTCATACTAATCCTCATTCTTTTTTAGATTAGGCACCATAAACT
*
22280 TAGTCTTCTCATAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACC
66 TAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACC
* *
22344 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCA
131 AATTTTGGTAAAGTCTATGTTCCTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
*
22409 TTCACATTGTGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTT
196 TTCACATTGTGATTAGGCAGTATAAACTTATTCTCCTCC----GATAAATGATATGGATGATTTT
*
22474 CTTTTGCATGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATCAAAGTTCATT-CTTGAAATAA
257 CTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTT-AAATAA
* * *
22538 GTCAAGCATTGATTCTCATAACAATCTCCACGCTTTTCAAGGTTGGGAACCAAAAACACATTCCT
321 GGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCT
* * * * *
22603 TTCAATAAGATACGCAACATTGACGCTTTAATGTTGCAAGCAAAGTATTTCTTTCAACCATTTTT
386 TTCAATAGGATACGCAACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTT
*
22668 GATAGAATGAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACAAAAATCCTCATTCCTT
451 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACAAAAATCCTCATTCCTT
* *
22733 TTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGACACACGATATTGATGGTTTGGTTTCG
516 TTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCG
* * ** * * *
22798 TAAGTATGCTTTCAACAACCAATTTTGGTAAAGTCTATGTTCGTGCCTTAAATGTGCCAAACATG
581 TAAGAAAGCTTTCTTCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATG
* *
22863 CATTCTAGTAATGGA--TTCA--C-GTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGA
646 GATTCTAGTAAT-GATCTTCATTCAATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGA
* *
22923 TAAATGATATGGATGATTTTCTTTTGCTTGGAAATCTTTTCTTTGCCCTATTTTCTTTAAAATCA
710 TAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * *
22988 AAGTTCGTTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCACTCTTTACGAGATTGG
775 AAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
* * *
23053 GAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAATTTCGCAAGAAAAGC
840 GAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGACGCTTTAATGTCGCAAGAAAAGC
*
23118 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCT
905 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
23159 TAAATAAAACAAACATGAAT
1 TAAATAAAACAAACATGAAT
23179 TGATGAAAAC
Statistics
Matches: 3375, Mismatches: 348, Indels: 127
0.88 0.09 0.03
Matches are distributed among these distances:
919 5 0.00
920 62 0.02
921 133 0.04
922 52 0.02
923 5 0.00
924 4 0.00
925 153 0.05
927 325 0.10
928 62 0.02
929 17 0.01
931 1 0.00
932 1 0.00
933 2 0.00
935 1 0.00
937 1 0.00
939 2 0.00
940 1 0.00
941 1 0.00
943 81 0.02
944 282 0.08
945 325 0.10
946 996 0.30
947 6 0.00
948 5 0.00
949 54 0.02
950 186 0.06
951 73 0.02
952 520 0.15
953 19 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (945 bp):
TAAATAAAACAAACATGAATAGTCATACTAATCCTCATTCTTTTTTAGATTAGGCACCATAAACT
TAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACC
AATTTTGGTAAAGTCTATGTTCCTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
TTCACATTGTGATTAGGCAGTATAAACTTATTCTCCTCCGATAAATGATATGGATGATTTTCTTT
TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAA
GCATTGATTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAA
TAGGATACGCAACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAG
AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGG
ATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGA
AAGCTTTCTTCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTC
TAGTAATGATCTTCATTCAATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATG
ATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTC
ATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCA
AAAACACATTCCTTTCAATAGGATATGCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCT
TTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
Found at i:24824 original size:12 final size:11
Alignment explanation
Indices: 24802--24877 Score: 52
Period size: 12 Copynumber: 6.9 Consensus size: 11
24792 AGAGAAAGAA
*
24802 GAGAGAGGAGG
1 GAGATAGGAGG
24813 GATGATAGGAGG
1 GA-GATAGGAGG
*
24825 AGAGACAGGA--
1 -GAGATAGGAGG
*
24835 GAGATAGTA--
1 GAGATAGGAGG
24844 GAGATAGGAGG
1 GAGATAGGAGG
24855 GATGATAGGAGG
1 GA-GATAGGAGG
*
24867 AGAGACAGGAG
1 -GAGATAGGAG
24878 AGAAAATAGA
Statistics
Matches: 53, Mismatches: 6, Indels: 11
0.76 0.09 0.16
Matches are distributed among these distances:
9 15 0.28
11 4 0.08
12 30 0.57
13 4 0.08
ACGTcount: A:0.39, C:0.03, G:0.49, T:0.09
Consensus pattern (11 bp):
GAGATAGGAGG
Found at i:24853 original size:42 final size:42
Alignment explanation
Indices: 24792--24910 Score: 184
Period size: 42 Copynumber: 2.8 Consensus size: 42
24782 TAGCCCTCAA
*
24792 AGAGAAAGAAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
1 AGAGAAAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
* *
24834 AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGAGACAGG
1 AGAGAAAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
* * *
24876 AGAGAAAATAGAGAGGGGAGGGATGACAGGAGGAG
1 AGAGAAAGTAGAGAGAGGAGGGATGATAGGAGGAG
24911 GAGAGAAGAA
Statistics
Matches: 69, Mismatches: 8, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
42 69 1.00
ACGTcount: A:0.43, C:0.03, G:0.47, T:0.08
Consensus pattern (42 bp):
AGAGAAAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
Found at i:30793 original size:42 final size:42
Alignment explanation
Indices: 30738--30856 Score: 193
Period size: 42 Copynumber: 2.8 Consensus size: 42
30728 TTCTTCTCTC
* *
30738 CTCCTCCTGTCATCCCTCCTCTCTCTATTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
*
30780 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
* *
30822 CTCCTCCTATCATCCCTCCTCTCTCTTCTTTCTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCT
30857 TTGAGGGCTA
Statistics
Matches: 71, Mismatches: 6, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
42 71 1.00
ACGTcount: A:0.08, C:0.46, G:0.03, T:0.43
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
Found at i:30797 original size:12 final size:11
Alignment explanation
Indices: 30771--30846 Score: 52
Period size: 12 Copynumber: 6.9 Consensus size: 11
30761 TCTATTATCT
*
30771 CTCCTGTCTCTC
1 CTCCTATCTC-C
30783 CTCCTATCATCC
1 CTCCTATC-TCC
30795 CTCCTATCT--
1 CTCCTATCTCC
*
30804 CTACTATCT--
1 CTCCTATCTCC
*
30813 CTCCTGTCTCTC
1 CTCCTATCTC-C
30825 CTCCTATCATCC
1 CTCCTATC-TCC
*
30837 CTCCTCTCTC
1 CTCCTATCTC
30847 TTCTTTCTCT
Statistics
Matches: 53, Mismatches: 6, Indels: 11
0.76 0.09 0.16
Matches are distributed among these distances:
9 15 0.28
11 3 0.06
12 31 0.58
13 4 0.08
ACGTcount: A:0.09, C:0.49, G:0.03, T:0.39
Consensus pattern (11 bp):
CTCCTATCTCC
Found at i:30798 original size:24 final size:24
Alignment explanation
Indices: 30762--30847 Score: 85
Period size: 24 Copynumber: 3.8 Consensus size: 24
30752 CCTCCTCTCT
* *
30762 CTATTATCTCTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
* *
30786 CTATCATCCCTCC--TATCT-CTA
1 CTATCATCCCTCCTGTCTCTCCTC
30807 CTATC-T--CTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
*
30828 CTATCATCCCTCCTCTCTCT
1 CTATCATCCCTCCTGTCTCT
30848 TCTTTCTCTT
Statistics
Matches: 49, Mismatches: 7, Indels: 12
0.72 0.10 0.18
Matches are distributed among these distances:
18 4 0.08
20 5 0.10
21 14 0.29
22 5 0.10
24 21 0.43
ACGTcount: A:0.10, C:0.45, G:0.02, T:0.42
Consensus pattern (24 bp):
CTATCATCCCTCCTGTCTCTCCTC
Found at i:30822 original size:18 final size:18
Alignment explanation
Indices: 30753--30823 Score: 52
Period size: 18 Copynumber: 3.6 Consensus size: 18
30743 CCTGTCATCC
* *
30753 CTCCTCTCTCTATTATCT
1 CTCCTGTCTCTACTATCT
*
30771 CTCCTGTCTCTCCTCCTATCAT
1 CTCCTG--TCT-CTACTATC-T
*
30793 CCCTCCTATCTCTACTATCT
1 --CTCCTGTCTCTACTATCT
30813 CTCCTGTCTCT
1 CTCCTGTCTCT
30824 CCTCCTATCA
Statistics
Matches: 41, Mismatches: 6, Indels: 12
0.69 0.10 0.20
Matches are distributed among these distances:
18 15 0.37
20 4 0.10
21 13 0.32
22 4 0.10
24 5 0.12
ACGTcount: A:0.10, C:0.44, G:0.03, T:0.44
Consensus pattern (18 bp):
CTCCTGTCTCTACTATCT
Found at i:37102 original size:476 final size:475
Alignment explanation
Indices: 36202--129344 Score: 132895
Period size: 476 Copynumber: 197.0 Consensus size: 475
36192 GTCATCACTT
*
36202 TTTTCCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCA
1 TTTT-CCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCA
* * *
36267 CTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTA
65 CTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTA
* * *
36332 ATGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
130 ATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
36397 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * * *
36462 TCATAAGCAGACAGGATATTGATGGTTTAGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTCGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
36527 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAATCATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
36592 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
36657 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
36679 TTTTCCCTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
36744 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
36809 TGTTCCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
36874 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGA-TACGGCACCACAAACTTAGTCTTC
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTA-GGCACCATAAACTTAGTCTTC
* * *
36938 TCATAAGCATACGCGATGTTGATTGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
37003 CAAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTT
324 TAAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACAT
* * * * * *
37067 TGTGATTACGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATTATTTTCTTTTGC
388 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGC
* *
37132 ATGGAAATCTTTTCTTTGACCTT
453 ATGGAAATCTTTTCTTTGCCCTA
* *
37155 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAATAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
37220 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACTTTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
37285 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
37349 ACAAACATGAATAGT---------CTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTCT
195 ACAAACATGAATAGTCACAAAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
37405 CATAAGCAGACAGGATATTGATGGTTTGGTTTTGTAAGAAAGGCTTTCTTCCTACCAATTTCGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
37470 AAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * * *
37535 TGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
37600 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * *
37621 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
37686 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
37751 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
37816 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * *
37881 CATAAGCATACGCGATATTGATTGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAA-TTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * **
37945 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAATAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
38009 GTGATTAGCCAATATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
38074 TGGAAATCTTCTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
38096 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
38161 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
** *
38226 TGTCACAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
38291 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
38356 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CCACCAATTTTAGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
38419 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGCAATGG-----ATT-AAAGTT
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACA-TT
*
38478 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
38543 TGGAAATCTTTTCTTTGCCCTT
454 TGGAAATCTTTTCTTTGCCCTA
* *
38565 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
38630 TCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
38695 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
38760 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTTGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
38825 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
38888 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
38948 TGATTAGGCAGTATAAACTTATTCTCCGCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
39013 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* *
39034 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAATAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
39099 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACTTTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
39164 TGTTGCAAGAAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
39229 CAAACATGAGTAGTTACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * ** * * *
39294 CACAATG-ATACACGATGTTGATGCCTTGGTTTTGTAAGAAATGATTTCTTCCCACCAATTTTGG
260 CATAA-GCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * *** * *
39358 TAAAGTCTACGTTCGTGCCACAAATGTGACAAACATGGATTCTAG---TGGTGACCTTTCACTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * *
39420 GTGATTGGGCACTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
39485 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * * *
39507 CTTTCCATAAAAT-AAAGTTCATTCCTTAAATTAGGCAAGCTTTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
39571 TCTTTTCGAGATT-GG---CAAAAGCACATTCCTTTCATTAGGGTACGAGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
39632 GGTCGCATGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCCTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * * ** *
39697 CAAAGATGAATAGTCATAGAAATCCTTATTCTTTTTCAGATTAGGCACCATAAACTTAGTATTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * *
39762 CATAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * ** * * *
39827 AAAGTCTATGTTCATGCCTCAAATATGACAAATAGGGATTGTGGTTTTGATCTTCTTTCACATTA
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
39892 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
39957 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
39978 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * * *
40043 TCTTTACGAGATTGGAAACCAAAAATACACTCCTTTCAAAAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
40108 TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
40173 CAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTGGGCACCATAAACTTAGTTTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * *
40238 CATAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTTTTCCCACCAATTTTTGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
*
40302 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
40367 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
40432 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* *
40453 TTTTCCTTCAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
40518 TCTTTTCGAGATTGGGAACCAAAAACACATTCATTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
40583 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
40648 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTTGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
40713 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
40776 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
40836 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
40901 GGAAATCTTTTCTTTGCCC-A
455 GGAAATCTTTTCTTTGCCCTA
* *
40921 TTTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAATAATCTCCA
1 -TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCA
* *
40986 CTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACTTTGACGCTTTA
65 CTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTA
* *
41051 ATGTTGCAAGAAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
130 ATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * *
41116 ACAAACATGAGTAGTTACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * * * *
41181 TCACAATG-ATACACGATGTTGATGCTTTGGTTTTGTAAGAAATGATTTCTTCCCACCAATTTTG
259 TCATAA-GCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTG
* * ** *** * *
41245 GTAAAGTCTACGTTCGTGCCACAAATGTAACAAACATGGATTCTAG---TGGTGACCTTTCACTT
323 GTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACAT
* * *
41307 TGTGATTGGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATAGATGATTTTCTTTTGC
388 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGC
*
41372 ATGGAAATCTTTTCTTCGCCCTA
453 ATGGAAATCTTTTCTTTGCCCTA
*
41395 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTATCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
41460 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAAGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
41525 TGTTGCAAGAAAATCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
41589 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* ** *
41654 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTGCCAATTTCGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * **
41719 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
41784 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
41849 TGAAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * *
41871 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
41936 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
42001 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
42066 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCGCCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
42131 CATAAGCATACGCGATATTGATTGTTTGGTTTCGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
42196 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
42260 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
42325 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * * *
42347 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTAATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
42412 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
42477 TGTTGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
42542 CAAACATGAATAGTCACAAAAGTCTTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAA-ACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
42607 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
42672 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
42737 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
42802 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
42823 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAATGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
42888 TCTTTACGAGATTGGAAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
42953 TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
43018 CAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTCGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* *
43083 CGTAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
*
43147 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
43212 TGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* *
43277 GGAAATCTTCTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
43298 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
43363 GCTTTTCAAGGTTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
43428 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
43493 CAAACACGAATAGTCACAAAAATCCTCATTCCTTTATGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * ** *
43558 CATAAGGACACATGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
43621 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
43681 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
43746 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
43767 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
43832 TCTTTACGAGATTGGGAACCAAAAATACATTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
43897 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * *
43961 ACAAACATGAATAGTCACAGAAATCCTTATTCTGTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
44026 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAGAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
44091 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGCCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
44156 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
44221 CGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * *
44243 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
44308 TCTTTTTGAGACTGGGACCCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
44373 TGTTGCAAGAAAAGCATTTCTTTCTACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
44438 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGCCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
44503 CATAAGCATACGCGATATTGATTGTTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
44568 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
44632 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
44697 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * * *
44719 TTTCCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
44784 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
44849 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
44914 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
44979 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
45042 AAAGTCTATGTCCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
45102 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
45167 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * *
45188 TTTTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
45253 TCTTTTCGAGATT-GG---CAAAAGCACATTCCTTTCATTAGGATATGAGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
45314 GGTCGCATGAAAAACATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCCTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * * ** *
45379 CAAAGATGAATAGTCATAGAAATCCTTATTCTTTTTCAGATTAGGCACCATAAACTTAGTATTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * *
45444 CATAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
45509 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
45574 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* *
45639 GGAAATCTTTTCTTTGCACTT
455 GGAAATCTTTTCTTTGCCCTA
*
45660 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
45725 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
45790 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
45855 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTTGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * ** *
45920 CATAAGGACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
45983 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
46043 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
46108 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
46129 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAGGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
46194 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
46259 T-TTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
46323 ACAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGGACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
46388 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * *
46452 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTTATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
46517 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
46582 TGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
46604 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
46669 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
46734 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
46798 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
46863 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAGAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
46928 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGCCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
46993 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
47058 CGAAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * *
47080 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
47145 TCTTTTTGAGACTGGGACCCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
47210 TGTTGCAAGAAAAGCATTTCTTTCTACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
47275 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGCCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
47340 CATAAGCATACGCGATATTGATTGTTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
47405 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
47469 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
47534 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * * *
47556 TTTCCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
47621 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
47686 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
47751 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
47816 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
47879 AAAGTCTATGTCCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
47939 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
48004 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * *
48025 TTTTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
48090 TCTTTTCGAGATT-GG---CAAAAGCACATTCCTTTCATTAGGATATGAGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
48151 GGTCGCATGAAAAACATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCCTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * * ** *
48216 CAAAGATGAATAGTCATAGAAATCCTTATTCTTTTTCAGATTAGGCACCATAAACTTAGTATTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
48281 CATAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACAAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
48346 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
48411 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* *
48476 GGAAATCTTTTCTTTGCACTT
455 GGAAATCTTTTCTTTGCCCTA
*
48497 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
48562 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
48627 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
48692 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTTGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * ** *
48757 CATAAGGACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
48820 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
48880 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
48945 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
48966 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAGGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
49031 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
49096 T-TTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
49160 ACAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGGACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
49225 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * *
49289 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTTATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
49354 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
49419 TGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
49441 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
49506 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
49571 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
49635 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
49700 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAGAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
49765 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGCCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * *
49830 GTGATTAGGCACTATAAACTTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
49895 CGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * *
49917 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
49982 TCTTTTTGAGACTGGGACCCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
50047 TGTTGCAAGAAAAGCATTTCTTTCTACCGTTTTTTATAAAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * * *
50112 CAAACATGAATAGTTACAGAAAACCTTATTCTTTTTTGGATAAGCCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
50177 CATAAGCATACGCGATATTGATTGTTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
50242 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
50306 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
50371 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
50393 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
50458 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
50523 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
50588 CAAACACGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * *
50653 CATAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
50718 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAAGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
50783 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
50848 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
50869 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAGGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
50934 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
50999 T-TTCGCAAGAAAAGCATTTCTTTCTACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
51063 ACAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
51128 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
51192 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
51257 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
51322 TGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
51344 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
51409 TCTTTTTGAGACT-GGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
51473 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
51537 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
51602 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAGAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * *
51667 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
51732 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
51797 TGGAAATCTTTTCTTTACCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
51819 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
51884 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
51949 T-TTCGCAAGAAAAGCATTTCTTTCTACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
52013 ACAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
52078 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
52142 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
52207 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
52272 TGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
52294 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
52359 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
52424 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
52488 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
52553 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAGAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
52618 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGCCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
52683 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
52748 CGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * *
52770 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
52835 TCTTTTTGAGACTGGGACCCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
52900 TGTTGCAAGAAAAGCATTTCTTTCTACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * * *
52965 CAAACATGAATAGTCATAGAAAACCTTATTCTTTTTTGGATAAGCCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
53030 CATAAGCATACGCGATATTGATTGTTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
53095 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
53159 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
53224 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * * *
53246 TTTCCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
53311 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
53376 TGTCGCAAGAAAAACATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
53441 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
53506 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
53569 AAAGTCTATGTTCGTGCCTGAAATTTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
53629 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
53694 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * *
53715 TTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATCAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
53780 TCTTTTTGAGACTGGGAACCAAAAACAC-TTTC-TTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
53843 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
53907 ACAAACATGAATAGTCACAAAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
53972 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTCGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
54037 TAAAGTGTAAGTTTGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
54102 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
**
54167 TGGAAATCTTTTCTTCACCCTA
454 TGGAAATCTTTTCTTTGCCCTA
54189 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* ** * * * *
54254 TCTTTTTGAGACAGGGAACCAAACACACTTTCTTTTCAATAGGATACGCGGCATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
54319 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCCTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * * ** *
54383 ACAAAGATGAATAGTCATAGAAATCCTTATTCTTTTTCAGATTAGGCACCATAAACTTAGTATTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
54448 TCATAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * * * * *
54513 CAAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
54578 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
54643 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * **
54665 TTTTCCTTAAAATCGAAGTTTATTCCTCAAATAACTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
54730 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
54795 T-TTCGTAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTT-TCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
54858 ACAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * **
54923 TCATAAGCATACATGATATTGATGATTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
54987 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
55052 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATAGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
55117 TGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
55139 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
55204 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATCGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
55269 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * *
55333 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAAGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
55398 TCATAAGCAGACACAATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
55463 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATCGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
55528 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
55593 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
55615 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
55680 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
55745 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATCAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
55810 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGCCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
55875 CATAAGCATACGCGATATTGGTTGTTTGGTTTCATAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
55940 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
56004 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGAT-ATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
56068 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * * *
56090 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGAATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
56155 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
56220 TGTCGCAAGAAAAGCATTTCTTCCAACTGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
56285 CAAACATGAATAGTCACAAAGATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTGTTCT
196 CAAACATGAATAGTCACAAA-AACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
56350 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
56413 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTTACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
56473 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCCT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* *
56538 GGAAATCTTTTCTTTTCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* * *
56559 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAGGCATTGATTCTCATAATAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
56624 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATGGGATACGCAACTTTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
56689 TGTTGCAAGAAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
56754 CAAACATGAGTAGTTACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * *
56819 CATTAGCATACACGATATTGATGGTTTGGCTTCGTAAGAAAGG-TTTCTTCCCACCCATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
*
56883 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
56948 TGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
**
57013 GGAAATCTTTTCTTCACCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * **
57034 TTTTCCTTAAAATCGAAGTTCATTCCTCAAATAACTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * ** *
57099 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATACGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
57164 T-TTCGTAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGATTCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
57228 ACAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTTGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * **
57293 TCATAAGCATACATGATATTGATGTTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
57357 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
57422 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
57487 TGGAAATC--TTC---ACCCCA
454 TGGAAATCTTTTCTTTGCCCTA
57504 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* ** * * *
57569 TCTTTTTGAGACAGGGAACCAAACACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
57634 TGTTGCAAGCAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCCTAGATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * * ** *
57698 ACAAAGATGAATAGTCATAGAAATCCTTATTCTTTTTCAGATTAGGCACCATAAACTTAGTATTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
57763 TCATAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTGT-G
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * * *
57827 TCAAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGGTCTTCTTTCACAT
324 T-AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACAT
*
57892 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGC
388 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGC
*
57957 TTGGAAATCTTTTCTTTGCCCTA
453 ATGGAAATCTTTTCTTTGCCCTA
*
57980 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
58045 TCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
58110 TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
58175 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * ** *
58240 CATAAGGACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
58303 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATAG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
58363 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
58428 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * **
58449 TTTTCCTTAAAATCGAAGTTCATTCCTCAAATAACTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
58514 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
58579 T-TTCGTAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
58643 ACAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
58708 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
58772 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
58837 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
58902 TGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
58924 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
58989 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
59054 TGTTGCAAGAAAAGCATTTCTTTCTACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
59119 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGCCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
59184 CATAAGCATACGCGATATTGATTGTTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
59249 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
59313 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
59378 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * **
59400 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGCCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * * *
59465 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATATGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
59530 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
59595 CAAACATGAATAGTCACAAAAATCCTCATTCGTTTTTGGATAAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* *
59660 CATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * **
59725 AAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATTGTCTTCATTCATTTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * * * *
59790 TGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCAC
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
59855 GAAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * *
59876 TTTTCCTTAAAATCAAAGCTCATTCCTTAAATAAGGCATGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
59941 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
60006 T-TTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
60070 ACAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
60135 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
60199 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
60264 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
60329 AGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
60351 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
60416 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
60481 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTAAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
60545 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
60610 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTCGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
60675 TAAAGTGTAAGTTTGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
60740 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
60805 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
60827 TTTTCCTTAAAATCGAATTTTATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
60892 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
60957 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAGTCAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
61022 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
61087 CATAAGCATACGCGATATTGGTTGTTTGGTTTCATAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
61152 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * * *
61216 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATTATTTTTTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
61281 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * * *
61303 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGAATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
61368 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
61433 TGTCGCAAGAAAAGCATTTCTTCCAACTGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
61498 CAAACATGAATAGTCACAAAGATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAA-AACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
61563 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
61626 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
61686 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* *
61751 GGAAATCTTTTCTTTTCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* * *
61772 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAGGCATTGATTCTCATAATAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
61837 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACTTTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
61902 TGTTGCAAGAAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * **
61967 CAAACATGAGTAGTTACACTAATTCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* *
62032 CATTAGCATACACGATATTGATGGTTTGGCTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
*
62096 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
62161 TGATTAGGCAATATAAACTTATTCTCCTCCTGAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* *
62226 GGAAATC--TTC---ACCCCA
455 GGAAATCTTTTCTTTGCCCTA
*
62242 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTTTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* ** * * *
62307 TCTTTTTGAGACAGGGAACCAAACACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
62372 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCCTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * * * ** *
62436 ACAAAGATGAATAGTCATAGACATCCTTATTCTTTTTCAGATTAGGCACCATAAACTTAGTATTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * *
62501 TCATAAGCATACACGATATTAATGGTTTGGTTTCGAAAGAAAGCCTTTTTTCCCACCAATTTT-G
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * * * *
62565 TCAAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACAT
324 T-AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACAT
*
62630 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGC
388 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGC
*
62695 TTGGAAATCTTTTCTTTGCCCTA
453 ATGGAAATCTTTTCTTTGCCCTA
* *
62718 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGGAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
62783 TCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
62848 TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
62913 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * ** *
62978 CATAAGGACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
63041 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
63101 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
63166 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * **
63187 TTTTCCTTAAAATCGAAGTTCATTCCTCAAATAACTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
63252 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
63317 T-TTCGTAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
63381 ACAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
63446 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
63510 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
63575 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
63640 TGGAAATC--TTC---ACCCCA
454 TGGAAATCTTTTCTTTGCCCTA
63657 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* ** * * * *
63722 TCTTTTTGAGACAGGGAACCAAACACACTTTCTTTTCAATAGGTTACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
63787 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCCTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * * ** *
63851 ACAAAGATGAATAGTCATAGAAATCCTTATTCTTTTTCAGATTAGGCACCATAAACTTAGTATTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
63916 TCATAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTT-G
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * * * *
63980 TCAAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACAT
324 T-AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACAT
*
64045 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGC
388 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGC
*
64110 TTGGAAATCTTTTCTTTGCCCTA
453 ATGGAAATCTTTTCTTTGCCCTA
*
64133 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
64198 TCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
64263 TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
64328 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * ** *
64393 CATAAGGACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
64456 AAAGTCTATGCTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
64516 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
64581 GGAAATCTTTTTTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * **
64602 TTTTCCTTAAAATCGAAGTTCATTCCTCAAATAACTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
64667 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
64732 T-TTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
64796 ACAAACATGAATAGTCACACAAAGCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
64861 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
64925 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
64990 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
65055 AGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
65077 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCTAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
65142 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
65207 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCCTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * * ** *
65271 ACAAAGATGAATAGTCATAGAAATCCTTATTCTTTTTCAGATTAGGCACCATAAACTTAGTATTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
65336 TCATAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * * * * *
65401 CAAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
65466 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
65531 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
65553 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
65618 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
65683 T-TTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
65747 ACAAACATGAATAGTCACACAAAGCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
65812 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGTTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
65877 TAAAGTGTAAGTTTGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
65942 CTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
66007 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
66029 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
66094 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
66159 CGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * *
66223 ACAAACATGAATAGTCACAGAAATCCTTATTCGTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
66288 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
66353 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATTGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
66418 GTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
66483 CGAAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
66505 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
66570 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
66635 T-TTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
66699 ACAAACATGAATAGTCACACAAAGCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
66764 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
66828 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
66893 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
66958 AGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
66980 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCTAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
67045 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
67110 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
67174 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
67239 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
67304 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATTGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
67369 GTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
67434 CGAAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * *
67456 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
67521 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
67586 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTATCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
67651 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
67716 CATAAGCATACGCGATATTGATTGTTTGGTTTCGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * **
67781 AAAGTGCAAT-ATCGTGCCTTAATTGTGGCAAACATGGATTCTCGTAATGGTCTTCATTCATTTT
325 AAAGT-CTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
67845 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
67910 TAGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * * *
67932 TTTTCCTTAAAATCGAATTTAATTCCTTAAACAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
67997 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
68062 TGTCGCAAGAAAAGCATTTCTTCCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
68127 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
68192 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
68255 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
68315 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
68380 GGAAATCTTTTCTTTGCTCTA
455 GGAAATCTTTTCTTTGCCCTA
* * * * * *
68401 TTTTCCTTTAAATCAAA-TTCATCCCTTAAATAAAGCAAGCGTTGTTTCTCATAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *** **
68465 TCTTTTCAATATTGGGAACCAAAAACACATTCCTTTCATTAGGATATATGACATTGACGCTTTGG
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*** * * * * * *
68530 TGTCATAAAAAAAGCATTTCTTTCAAACGTTTTTGACAGAATCAAAGTTTATCTCTAAAATAGGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * ** * * *
68595 CAAACATGAATTGTCATACTAATTCTCATTCTTTTTAGGATTAGCCACCATAAACTTAGTTTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
68660 CATAAAG-ATACATGATATTGATGGTTTAGTTTTGTGAGAAA-GCTTCCTTCCCACCAATTTTGG
260 CAT-AAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
68723 TTAAGTCTATGTTCGTGCCTCAGATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
*
68788 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
68853 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* *
68875 TTTTCCTTAAAATCAAAGTTCATTCCTTAAAGAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
68940 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
69005 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
69070 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGAATAGGCGCCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * ** * **
69135 CATAAGGACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTAAAT--AACCAATCCTGG
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTT-CTTCCCACCAATTTTGG
** *
69197 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATTCATTCTAGTAATGG-----ATTCACGTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
*
69257 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
69322 TGGAAATTTTTTCTTTGCCATA
454 TGGAAATCTTTTCTTTGCCCTA
* *
69344 TTTTCCTTAAAATCAAAGTTCATACCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
69409 TCTTTAT-GAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTA
66 TCTTT-TCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTA
* * *
69473 ATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTGAAATAAA
130 ATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
69538 ACAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTCGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
*
69603 TCATAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
*
69667 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
69732 GTGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
69797 TGGAAATCTTCTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
69819 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
69884 GCTTTTCGAGGTTGGGAACCAAAAACACATTCTTTTCAATAAGATACGCAACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
69949 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
70014 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTTGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
70079 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
70142 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
70202 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
70267 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* *
70288 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAATAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
70353 TCTTTTCGAGATTAGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACTTTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
70418 TGTTGCAAGAAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGCCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
70483 CAAACATGAGTAGTTACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * * *
70548 CACAATG-ATACACGATGTTGATGCTTTGGTTTTGCAAGAAATGATTTCTTCCCACCAATTTTGG
260 CATAA-GCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * *** * *
70612 TAAAGTCTACGTTCGTGCCACAAATGTGACAAACATGGATTCTAG---TGGTGACCTTTCACTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * *
70674 GTGATTGGGCAGTATAAACTTATTCTCCTCCTTAAGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
70739 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* *
70761 TTTTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
70826 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
70891 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
70956 CAAACATGAATAGTCACAGAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * *
71021 CATAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
71086 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
71151 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
71216 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
71237 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
71302 TCTTTACGAGATTGGGAACCAAAAACACACTCCTTTCAATAGGATACACGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
71367 TGTAGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
71432 CAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTGGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
*
71497 CATAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
71561 AAAGTCTATATTCGTGTCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
71626 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATACTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
71691 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* *
71712 TTTTCCTTAAAATCAAAGTTCATTCATTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
71777 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
71842 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * **
71907 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTCGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
** * * *
71972 CATAAGCATACACGATATTGATGGTTTGGTTTCAAAAG-TATGCTTTCAT-CCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
72035 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
72095 TGATTAGGTAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
72160 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
*
72181 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAATGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
72246 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
72311 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
72375 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
72440 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTCGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * **
72505 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
72570 GTGTTTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
72635 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
72657 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
72722 TCTTTTCGAGATT-GG---CAAAAGCACATTCCTTTCATTAGGATACGAGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
72783 GGTCGCATGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
72848 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
72913 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
72978 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
73043 TGATTAGGCAGTATAAACTTATTCTCCTCCCTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
73108 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
73129 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
73194 TCTTTACGAGATTGGGAACCAAAAATACAATCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
73259 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
73324 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
73389 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCACACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
73454 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
73519 TGATTAGGCAGTATAAACTTATTCTCCTCCCTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
73584 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
73605 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
73670 TCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
73735 TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
73800 CAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTCGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
*
73865 CATAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
*
73929 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
73994 TGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* *
74059 GGAAATCTTCTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
74080 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
74145 GCTTTTCAAGGTTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
74210 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
74275 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTGTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * ** *
74340 CATAAGCACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
74403 AAAGTCTATGTTCATGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
74463 TGATTAGGTAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
74528 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* *
74549 TTTTCCTTAAAATCAAAGTTCATTCATTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
74614 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
74679 TGTTGCATGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * **
74744 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTCGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
** * * *
74809 CATAAGCATACACGATATTGATGGTTTGGTTTCAAAAG-TATGCTTTCAT-CCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
74872 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ACTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
74932 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
74997 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
75018 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
75083 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
75148 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
75212 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
75277 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTCGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * **
75342 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
75407 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
75472 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * * *
75494 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAATAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
75559 TCTTTTCGAGATT-GG---CAAAAGCACATTCCTTTCATTAGGATACGAGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
75620 GGTCGCATGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
75685 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
75750 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
75815 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
75880 TGATTAGGCAGTATAAACTTATTCTCCTCCCTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
75945 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
75966 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
76031 TCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
76096 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
76161 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
76226 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCACACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
76291 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
76356 TGATTAGGCAGTATAAACTTATTCTCCTCCCTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
76421 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
76442 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
76507 TCTTTACAAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
76572 TGTCT-CAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAA
131 TGT-TGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
76636 ACAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTCGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
*
76701 TCATAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
*
76765 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
76830 GTGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
76895 TGGAAATCTTCTT-TTCGCCCTA
454 TGGAAATCTT-TTCTTTGCCCTA
* *
76917 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCTAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
76982 GCTTTTCAAGGTTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
77047 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
77112 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTGTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * ** *
77177 CATAAGCACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
77240 AAAGTCTATGTTCATGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
77300 TGATTAGGTAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
77365 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* *
77386 TTTTCCTTAAAATCAAAGTTCATTCATTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
77451 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
77516 TGTTGCATGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * **
77581 CAAACATGAAAAGTCACAAAATCCTCATTCCTTTCGGGATTAGGCACCATAAACTTAGTCTTCTC
196 CAAACATGAATAGTCACAAAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTC
** * * *
77646 ATAAGCATACACGATATTGATGGTTTGGTTTCAAAAG-TATGCTTTCAT-CCACCAATTTTGGTA
261 ATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTA
* *
77709 AAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTGT
326 AAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTGT
*
77769 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTTG
391 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCATG
*
77834 GAAATCTTTTCTTTGCCCTT
456 GAAATCTTTTCTTTGCCCTA
77854 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
77919 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
77984 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
78048 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
78113 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTCGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * **
78178 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
78243 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
78308 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * * *
78330 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAATAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
78395 TCTTTTCGAGATT-GG---CAAAAGCACATTCCTTTCATTAGGATACGAGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
78456 GGTCGCATGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
78521 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
78586 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
78651 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
78716 TGATTAGGCAGTATAAACTTATTCTCCTCCCTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
78781 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
78802 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
78867 TCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
78932 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
78997 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
79062 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
79127 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
79192 TGATTAGGCAGTATAAACTTATTCTCCTCCATAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
79257 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
79278 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
79343 TCTTTACGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
79408 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
79473 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTGTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * ** *
79538 CATAAGCACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
79601 AAAGTCTATGTTCATGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
79661 TGATTAGGTAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
79726 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* *
79747 TTTTCCTTAAAATCAAAGTTCATTCATTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
79812 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
79877 TGTTGCATGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * **
79942 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTCGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
** * * *
80007 CATAAGCATACACGATATTGATGGTTTGGTTTCAAAAG-TATGCTTTCAT-CCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
80070 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ACTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
80130 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
80195 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
80216 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
80281 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
80346 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
80410 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
80475 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTCGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * **
80540 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
80605 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
80670 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
80692 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
80757 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
80822 T-TTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
80886 ACAAACATGAATAGTCACACAAAGCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
80951 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
81015 TAAAGTTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
81080 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
81145 AGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
81167 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCTAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
81232 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
81297 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
81361 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
81426 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
81491 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATTGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
81556 GTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
81621 CGAAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * *
81643 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
81708 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
81773 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTATCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
81838 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
81903 CATAAGCATACGCGATATTGATTGTTTGGTTTCGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * **
81968 AAAGTGCAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTCGTAATGGTCTTCATTCATTTT
325 AAAGT-CTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
82032 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
82097 TAGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * * *
82119 TTTTCCTTAAAATCGAATTTAATTCCTTAAACAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
82184 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
82249 TGTCGCAAGAAAAGCATTTCTTCCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
82314 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
82379 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
82442 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
82502 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
82567 GGAAATCTTTTCTTTGCTCTA
455 GGAAATCTTTTCTTTGCCCTA
* * * * * *
82588 TTTTCCTTTAAATCAAA-TTCATCCCTTAAATAAAGCAAGCGTTGTTTCTCATAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *** **
82652 TCTTTTCAATATTGGGAACCAAAAACACATTCCTTTCATTAGGATATATGACATTGACGCTTTGG
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * * *
82717 TG-T-CATAAAAAAGCATTTCTTTCAAACGTTTTTGACAGAATCAAAGTTTATCTCTAAAATAGG
131 TGTTGCA-AGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * ** * * *
82780 ACAAACATGAATTGTCATACTAATTCTCATTCTTTTTAGGATTAGCCACCATAAACTTAGTTTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * * *
82845 TCATAAAG-ATACATGATATTGATGGTTTAGTTTTGTGAGAAA-GCTTCCTTCCCACCAATTTTG
259 TCAT-AAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTG
* * *
82908 GTTAAGTCTATGTTCGTGCCTCAGATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACAT
323 GTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACAT
*
82973 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGC
388 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGC
83038 ATGGAAATCTTTTCTTTGCCCTA
453 ATGGAAATCTTTTCTTTGCCCTA
* *
83061 TTTTCCTTAAAATCAAAGTTCATTCCTTAAAGAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
83126 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
83191 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
83256 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGAATAGGCGCCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * ** * **
83321 CATAAGGACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTAAAT--AACCAATCCTGG
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTT-CTTCCCACCAATTTTGG
** *
83383 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATTCATTCTAGTAATGG-----ATTCACGTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
*
83443 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
83508 TGGAAATTTTTTCTTTGCCATA
454 TGGAAATCTTTTCTTTGCCCTA
* *
83530 TTTTCCTTAAAATCAAAGTTCATACCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
83595 TCTTTAT-GAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTA
66 TCTTT-TCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTA
* * * *
83659 ATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAAAATCAAAGTTTGTCTCTGAAATAAA
130 ATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
83724 ACAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTCGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
*
83789 TCATAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
*
83853 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
83918 GTGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
83983 TGGAAATCTTCTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
84005 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
84070 GCTTTTCGAGGTTGGGAACCAAAAACACATTCTTTTCAATAAGATACGCAACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
84135 TGTTGCAAGCAAAGTATTTCTTTCAACC-ATTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
84199 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTTGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
84264 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
84327 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
84387 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
84452 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* *
84473 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAATAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
84538 TCTTTTCGAGATTAGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACTTTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
84603 TGTTGCAAGAAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGCCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
84668 CAAACATGAGTAGTTACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * * *
84733 CACAATG-ATACACGATGTTGATGCTTTGGTTTTGCAAGAAATGATTTCTTCCCACCAATTTTGG
260 CATAA-GCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * *** * *
84797 TAAAGTCTACGTTCGTGCCACAAATGTGACAAACATGGATTCTAG---TGGTGACCTTTCACTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * *
84859 GTGATTGGGCAGTATAAACTTATTCTCCTCCTTAAGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
84924 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* *
84946 TTTTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCCC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
85011 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
85076 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * **
85141 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTCGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
** * * *
85206 CATAAGCATACACGATATTGATGGTTTGGTTTCAAAAG-TATGCTTTCAT-CCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
85269 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
85329 TGATTAGGTAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
85394 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
85415 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
85480 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
85545 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAAT-AG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
85608 TC--ACA-GAA-A-T--------CCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTCT
195 ACAAACATGAATAGTCACAAAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* *
85660 CATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
85725 AAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * * *
85790 TGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
85855 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * * * *
85876 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
85941 TCTTTTCGAGATT-GG---CAAAAGCACATTCCTTTCATTAGGATACGAGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
86002 GGTCGCATGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
86067 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
86132 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
86197 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
86262 TGATTAGGCAGTATAAACTTATTCTCCTCCATAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
86327 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
86348 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
86413 TCTTTACGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
86478 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
86543 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTGTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * ** *
86608 CATAAGCACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
86671 AAAGTCTATGTTCATGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
86731 TGATTAGGTAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
86796 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* *
86817 TTTTCCTTAAAATCAAAGTTCATTCATTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
86882 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
86947 TGTTGCATGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * **
87012 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTCGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
** * * *
87077 CATAAGCATACACGATATTGATGGTTTGGTTTCAAAAG-TATGCTTTCAT-CCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
87140 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ACTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
87200 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
87265 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
87286 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
87351 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
87416 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
87480 CAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * *
87545 CATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTCGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
87610 AAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * * *
87675 TGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
87740 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * * * *
87761 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
87826 TCTTTTCGAGATT-GG---CAAAAGCACATTCCTTTCATTAGGATACGAGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
87887 GGTCGCATGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
87952 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
88017 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
88082 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
88147 TGATTAGGCAGTATAAACTTATTCTCCTCCCTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
88212 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
88233 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
88298 TCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
88363 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
88428 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
88493 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCACACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
88558 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
88623 TGATTAGGCAGTATAAACTTATTCTCCTCCCTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
88688 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
88709 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
88774 TCTTTACAAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
88839 TGTCT-CAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAA
131 TGT-TGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
88903 ACAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTCGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
*
88968 TCATAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
*
89032 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
89097 GTGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
89162 TGGAAATCTTCTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* *
89184 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCTAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
89249 GCTTTTCAAGGTTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
89314 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
89379 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTGTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * ** *
89444 CATAAGCACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
89507 AAAGTCTATGTTCATGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
89567 TGATTAGGTAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
89632 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* *
89653 TTTTCCTTAAAATCAAAGTTCATTCATTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
89718 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
89783 TGTTGCATGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * **
89848 CAAACATGAAAAGTCACAAAAATCCTCATTCCTTTCGGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
** * * *
89913 CATAAGCATACACGATATTGATGGTTTGGTTTCAAAAG-TATGCTTTCAT-CCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
89976 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
90036 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
90101 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
90122 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
90187 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
90252 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
90316 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
90381 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTCGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * **
90446 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
90511 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
90576 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
90598 TTTTCCTTAAAATCAAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
90663 TCTTTTCGAGATT-GG---CAAAAGCACATTCCTTTCATTAGGATACGAGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
90724 GGTCGCATGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
90789 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTATTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
90854 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
90919 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
90984 TGATTAGGCAGTATAAACTTATTCTCCTCCCTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
91049 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
91070 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
91135 TCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
91200 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
91265 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
91330 CAAAAGCATACACGATATTGATGGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
91395 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * * *
91460 TGATTAGGCAGTATAAACTTATTCTCCTCCCTAGGATAAATGATGTGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
91525 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
91546 TTTTCCTT-AAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
91610 TCTTTACGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
91675 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
91740 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTGTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * ** *
91805 CATAAGCACACACGATATTGATGGTTTGGTTTTGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
91868 AAAGTCTATGTTCATGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
91928 TGATTAGGTAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
91993 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
92014 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
92079 TCTTTACGAGATTGGGAACCAAAAATACATTCCATTCAATAGGATATGCGACATTGACACTTAAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
92144 T-TTCCCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCCTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
92208 ACAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACCTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
92273 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * *
92337 TAAAGTTTATGTTCGTGCCTCAATTGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
92402 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
92467 TGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
92489 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
92554 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
92619 CGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
92683 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
92748 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
92813 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACGTGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
92878 GTGATTAGGCACTATAAACGTGTTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
92943 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * *
92965 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
93030 TCTTTTTGGGACTGGGAACGAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
93095 TGTTGCAAGAAAAGCATTTCTTTCTACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
93160 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGCCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * ** * * *
93225 CATAAGCTTACGCGATATTGATTATTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * **
93290 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATTGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
93354 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
93419 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
93441 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
93506 TCTTTTC-AGGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTG
66 TCTTTTCGA-GATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTA
* * *
93570 ATGTCGCAAGAAAAGCGTTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
130 ATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
93635 ACAAACATGAATAGTCATAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * ** * * * *
93700 TTATAAGCATACACGATATTGATGGTTTCGTTTTATAAG-TATGCTTTCAT-CTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* *
93763 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
93823 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTACT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
93888 TGGAAATCTTTTCTTTGCCCTT
454 TGGAAATCTTTTCTTTGCCCTA
*
93910 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
93975 TCTTTTCGAGATTGGGAAGCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
94040 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTCATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
94105 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAAGTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
94170 CATAAGCATACACGATATTGATGGTTTGGTTTCATATG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
94233 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
94293 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
94358 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * *
94379 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
94444 TCTTTTTGGGACTGGGAACGAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
94509 TGTTGCAAGAAAAGCATTTCTTTCTACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
94574 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGCCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * ** * * *
94639 CATAAGCTTACGCGATATTGATTATTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
94704 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
94768 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
94833 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
94855 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
94920 TCTTTTC-AGGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTG
66 TCTTTTCGA-GATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTA
* * *
94984 ATGTCGCAAGAAAAGCGTTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
130 ATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
95049 ACAAACATGAATAGTCATAAAAATCCTCATTCCTTTATGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* ** * * * *
95114 TTATAAGCATACACGATATTGATGGTTTGGTTTTATAAG-TATGCTTTCAT-CTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* *
95177 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
95237 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTACT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
95302 TGGAAATCTTTTCTTTGCCCTT
454 TGGAAATCTTTTCTTTGCCCTA
*
95324 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
95389 TCTTTTCGAGATTGGGAAGCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
95454 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTCATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
95519 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
95584 CATAAGCATACACGATATTGATGGTTTGGTTTCATATG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
95647 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
95707 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
95772 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
* *
95793 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAATAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
95858 TCTTTTCGAGATTGGAAACCAAAAACACATTCCTTTCAATAGGATACGCAACTTTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
95923 TGTTGCAAGAAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
95988 CAAACATGAGTAGTTACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
96053 CACAATG-ATACACGATGTTGATGCTTTGGTTTTGTAAGAAATGATTTCTTCCCACCAATTTTGG
260 CATAA-GCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * ** *** * *
96117 TAAAGTCTACGTTCGTGCCACAAATGTAACAAACATGGATTCTAG---TGGTGACCTTTCACTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
96179 GTGATTGGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
96244 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* *
96266 TTTTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
96331 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
96396 TGTCGCAAGAAAAGCATTTC-TTCGAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTC-AACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
*
96460 ACAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * * * *
96525 TCATAAGCATACACGATATTGATGGTTTGGTTTCATATG-TATGCTTTCAT-CTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* *
96588 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
96648 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTACT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
96713 TGGAAATCTTTTCTTTGCCCTT
454 TGGAAATCTTTTCTTTGCCCTA
*
96735 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
96800 TCTTTTCGAGATTGGGAAGCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
96865 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
96930 CAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * **
96995 CATTAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
97059 AAAGTTTATGTTCGTGCCTCAAATGTGCCAAGCATGGATTCTAGTAATGATCTTCATTCATATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
97124 TGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
97189 GGAAATCTTTTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
97210 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAACATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * ** *
97275 TCTTTTTGAGACTGGGAACCAAAAACATTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
97340 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
97404 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
97469 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGTTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
97534 TAAAGTGTAAGTTTGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
97599 CTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
97664 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
97686 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * ** *
97751 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACATGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
97816 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
97881 CAAAGATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
97946 CATAAGCATACGCGATATTGATTGTTTGGTTTCGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * **
98011 AAAGTGTAAT-ATCGTGCCAT-AATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTT
325 AAAGTCT-ATGTTCGTGCC-TCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACAT
* * * *
98074 TGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
388 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGC
98139 ATGGAAATCTTTTCTTTGCCCTA
453 ATGGAAATCTTTTCTTTGCCCTA
* * * * *
98162 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * * *
98227 TCTTTCCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
98292 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
98357 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
98422 CAAAAGCATACACGATATTGATTGTTTGGTTTCGAAAGAAAGGCTTTTTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
98487 AAAGTCTATGTTCATGCCTCAAATGTGACAAATAGGGATTGTGGTATTGATCTTCTTTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
98552 TGATTAGGCAGTATAAACTTATTCTCCTCCCTAGGATAAATGATATGGATGATTTTCTTTTGCAA
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
98617 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
98638 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCTTTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
98703 TCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
98768 TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
98833 CAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTCGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
*
98898 CATAAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
*
98962 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
99027 TGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* *
99092 GGAAATCTTCTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
99113 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
99178 GT-TTTTCAAGGTTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGACGCTTTA
66 -TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTA
* * *
99242 ATGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
130 ATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* *
99307 ACAAACATGAATAGTCACAAAAATCCTCATTCCTTTGTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * ** *
99372 TCATAAGCACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * *
99435 TAAAGTCTATGTTCATGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
99495 GTGATTAGGTAGTATAAACTTAGTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
99560 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
99582 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
99647 TCTTTACGAGATTGGGAACCAAAAATACATTCCATTCAATAGGATATGCGACATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
99712 T-TTCCCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCGAAGCTTGTCTCTTAAATAAA
131 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
99776 ACAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACCTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* **
99841 TCATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * *
99905 TAAAGTTTATGTTCGTGCCTCAATTGTGCCAAACATGGATTTTAGTAATGATCTTCATTCATATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
99970 GTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
100035 TGGAAATCTTTTCTTCGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
100057 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
100122 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
100187 CGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
100251 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
100316 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
100381 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACGTGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
100446 GTGATTAGGCACTATAAACGTGTTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
100511 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * *
100533 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
100598 TCTTTTTGAGACTGGGAACGAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
100663 TGTTGCAAGAAAAGCATTTCTTTCTACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
100728 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
100793 CATAAGCATACGCGATATTGATTGTTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
100858 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
100922 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
100987 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
** * * * * *
101009 TTTTCCTTAAAATTGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCCGCGTAACAGTCTCCA
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATT-CTCATAACAATCTCCA
* * * * *
101074 CTCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCAATAGGATACGCAACATTGATGCTTTG
65 CTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTA
* *
101139 ATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
130 ATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
*
101204 ACAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * * * *
101269 TCATAAGCATACAAGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* *
101332 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
101392 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATTTTGATGATTTTCTTTTGCT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
101457 TGGAAATCTTTTCTTTGCCCTT
454 TGGAAATCTTTTCTTTGCCCTA
* *
101479 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAA-CATTGATTCTCATAACAAACTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
101543 TCTTTTCGAGATTGGGAACCAAAAACACAATCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * * *
101608 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATTAAAGCTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
101673 CAAACATGAAAAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * **
101738 CATTAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
101802 AAAGTTTATGTTCGTGCCTCAAATGTGCCAAGCATGGATTCTAGTAATGATCTTCATTCATATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
101867 TGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
101932 GGAAATCTTTTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
101953 TTTTCCTTAAAATCAAAGTTCATTCTTTAAATAAGGCAAGGATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
102018 TCTTTTTGAGACTCGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
102083 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
102147 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * *
102212 TCATAAGCAGACACGATATTGATGGTTTGGTTTCATAAGAAAGGTTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
102277 TAAAGTGTAAGTTTGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
102342 CTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
102407 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
102429 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
102494 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
102559 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
102624 CAAAGATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
102689 CATAAGCATACGCGATATTGATTGTTTGGTTTCGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
102754 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
102818 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
102883 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
** * * * * *
102905 TTTTCCTTAAAATTGAATTTAATTCCTTAAATAGGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
102970 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCAATAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
103035 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
103100 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
103165 CATAAGCATACAAGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
*
103228 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCA-AGTT
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACA-TT
* *
103287 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATTTTGATGATTTTCTTTTGCT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
103352 TGGAAATCTTTTCTTTGCCCTT
454 TGGAAATCTTTTCTTTGCCCTA
*
103374 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAA-CATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
103438 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
103503 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
103568 CAAACATGAAAAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * **
103633 CATTAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * *
103697 AAAGTTTATGTTCGTGCCTCAAATGTGCCAAGCATGGATCCTAGTAATGATCTTCATTCATATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
103762 TGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
103827 GGAAATCTTTTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
103848 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGGATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
103913 TCTTTTTGAGACTCGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
103978 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
104042 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * * *
104107 ACATAAGCAGACACGATATTGATGGTTTGGTTTCATAAGAAAGGTTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
104172 TAAAGTGTAAGTTTGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
104237 CTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
104302 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
104324 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
104389 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
104454 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
104519 CAAAGATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * **
104584 CATAAGCATACGCGATATTGATTGTTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGCC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
104649 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
104713 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
104778 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
104800 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
104865 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
104930 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
104995 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
105060 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
105123 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
105183 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
105248 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
*
105269 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
105334 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
105399 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
105464 CAAACATGAAAAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * **
105529 CATTAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
105593 AAAGTTTATGTTCGTGCCTCAAATGTGCCAAGCATGGATTCTAGTAATGATCTTCATTCATATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
105658 TGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
105723 GGAAATCTTTTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
105744 TTTTCCTTAAAATCAAAGTTCATTCCTTAAACAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
105809 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
105874 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * *
105938 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTTGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
106003 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGTTTTCTTCCTACCAA-TTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
106067 TAAAGTGTAAGTTTGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
106132 CTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
106197 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
106219 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
106284 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
106349 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
106414 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
106479 CATAAGCATACGCGATATTGATTGTTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
106544 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
106608 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
106673 TGGAAATCTTTTCTCTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
106695 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
106760 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
106825 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
106890 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTATTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
106955 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
107018 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
107078 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGACGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
107143 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
*
107164 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
107229 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
107294 TGTTGCAAGCAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
107359 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
107424 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
107487 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
107547 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
107612 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
*
107633 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
107698 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
107763 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
107828 CAAACATGAAAAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * **
107893 CATTAGCATACATGACATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
107957 AAAGTTTATGTTCGTGCCTCAAATGTGCCAAGCATGGATTCTAGTAATGATCTTCATTCATATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
108022 TGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
108087 GGAAATCTTTTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
108108 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
108173 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
108238 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTTAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * *
108302 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTTGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
108367 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGTTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
108432 TAAAGTGTAAGTTTGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
108497 CTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
108562 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
108584 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
108649 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
108714 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
108779 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
108844 CATAAGCATACGCGATATTGATTGTTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
108909 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
108973 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
109038 TGGAAATCTTTTCTCTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
109060 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
109125 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
109190 TGTCGCAAGAAAAGCATTTCTTCCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
109255 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTATTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
109320 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
109383 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
109443 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGACGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
109508 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
*
109529 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
109594 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
109659 TGTTGCAAGCAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
109724 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
109789 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
109852 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
109912 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTC-TTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
109976 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
*
109997 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
110062 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
110127 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
110192 CAAACATGAAAAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * **
110257 CATTAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
110321 AAAGTTTATGTTCGTGCCTCAAATGTGCCAAGCATGGATTCTAGTAATGATCTTCATTCATATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
110386 TGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
110451 GGAAATCTTTTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
110472 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
110537 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
110602 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTTAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * *
110666 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTTGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * * * *
110731 TCATAAGCAGACACGATATTGATGGTTTGGTTTCATAAG-CATGCTTTCAT-CTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* *
110794 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
*
110854 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
110919 TGGAAATCTTTTCTTTGCCCTT
454 TGGAAATCTTTTCTTTGCCCTA
*
110941 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
111006 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
111071 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
111136 CAAACATGAAAAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * **
111201 CATTAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
111265 AAAGTTTATGTTCGTGCCTCAAATGTGCCAAGCATGGATTCTAGTAATGATCTTCATTCATATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
111330 TGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
111395 GGAAATCTTTTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
111416 TTTTCCTTAAAATCAAAGTTCATTCATTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
111481 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*
111546 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTTAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * *
111610 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTTGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
111675 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGTTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
111740 TAAAGTGTAAGTTTGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
111805 CTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
111870 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
111892 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
111957 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
112022 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
112087 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
112152 CATAAGCATACGCGATATTGATTGTTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
112217 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
112281 GTGATTAGGCATTATAAACGTATTTTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
112346 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
112368 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
112433 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
112498 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
112563 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTATTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
112628 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
112691 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
112751 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGACGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* *
112816 GGAAATCTTTTCTTTGCCTTT
455 GGAAATCTTTTCTTTGCCCTA
*
112837 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
112902 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
112967 TGTTGCAAGCAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
113032 CAAACA-GAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
113096 CATTAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
113159 AAAGTCTACGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
113219 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
113284 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
*
113305 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
113370 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
113435 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
113500 CAAACATGAAAAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * **
113565 CATTAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
113629 AAAGTTTATGTTCGTGCCTCAAATGTGCCAAGCATGGATTCTAGTAATGATCTTCATTCATATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
113694 TGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
113759 GGAAATCTTTTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
113780 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * ** *
113845 TCTTTTTGAGACTGGGAACCAAAAACATTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
113910 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
113974 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * *
114039 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGTTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
114104 TAAAGTGTAAGTTTGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * * *
114169 CTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
114234 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
114256 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
114321 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTAACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
114386 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTATTT-ATAAAATGAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTT-TTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
114450 ACAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * *
114515 TCATAAGCATACGCGATATTGATTGTTTGGTTTTGTAAGAAAGGTTTTCTTCCCACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
114580 CAAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTT
324 TAAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACAT
* * * *
114644 TGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
388 TGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGC
*
114709 ATGGAAATCTTTTCTCTGCCCTA
453 ATGGAAATCTTTTCTTTGCCCTA
* * * * *
114732 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
114797 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
114862 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
114927 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAG-CATTC
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC-TTC
* * * * *
114991 TCATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* *
115054 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* *
115114 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGACGATTTTCTTTTGCT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
115179 TGGAAATCTTTTCTTTGCCCTT
454 TGGAAATCTTTTCTTTGCCCTA
*
115201 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
115266 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
115331 TGTTGCAAGCAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
115396 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
115461 CATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-TATGCTTTCAT-CTACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
115524 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
115584 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
115649 GGAAATCTTTTCTTTGCCCTT
455 GGAAATCTTTTCTTTGCCCTA
*
115670 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
115735 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* ** * * *
115800 TGTTGCAAGCAAAGTTTTTCTTTCAACCATTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
115865 CAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * **
115930 CATTAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * *
115994 AAAGTTTATGTTCGTGCCTTAAATGTGCCAAGCATGGATTCTAGTAATGATCTTCATTCATATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
116059 TGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
116124 GGAAATCTTTTCTTCGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
116145 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
116210 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
116275 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
116339 ACAAACATGAATAGTCACATAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
116404 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
116469 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCTTTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
116534 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
116599 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
116621 TTTTCCGTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
116686 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
116751 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
116816 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
116881 GATAAGCATACGCGATATTAATTGTTTGGTTTCGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
116946 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
117010 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
117075 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
117097 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
117162 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
117227 TGTCGCAAGAAAAGCATTTC-TTCTAACCGTTTTTGATAAAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTC-AACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
*
117291 ACAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * * *
117356 TCATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-GATGCTTTCAT-CTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* *
117419 TAAAGTATATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
117479 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
117544 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
117566 TTTTCCTTAAAATCAAA-TTCATCCCTTAAATAAGGCAAGCATTGTTTCTCATAACAGTCTCCCC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *** * **
117630 TCTTTTCAACATTGGGAACCAAAAACACATTCCTTTCATTAGGATATATGACATTGATGCTTTGG
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*** * * * * * *
117695 TGTCATAAAAAAAGCATTTCTTTCAAACGTTTTTGACAGAATCAAAGTTTATCTCTAAAATAGGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * ** * * *
117760 CAAACATGAATTGTCATACTAATTCTCATTCTTTTTAGGATTAGCCACCATAAACTTAGTTTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
117825 CATAAGGATACATGATATTGATGGTTTAGTTTTGTGAGAAA-GCTTCCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
117889 TAAGTCTATGTTCGTGCCTCAGATGTGCCGAACATGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
117954 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGTATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
118019 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
118040 TTTTCCTTAAAATCAAAGTTCATTCCTTAAAGAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
118105 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
118170 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAATGTTTATCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
118235 C-AACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGAATAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * * *
118299 CATAAGGACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTCAAT--AACCAATCTTGG
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTC-TTCCCACCAATTTTGG
* *
118361 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * *
118421 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTACT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
118486 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
118508 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
118573 TCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
118638 TATCGCAAGAAAAGCATTTCTTTCACCCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
118703 CAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTCGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
*
118768 CA-AAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
*
118831 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
118896 TGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
* **
118961 GGAAATCATTTCTTCACCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
118982 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
119047 GCTTTTCGAGGTTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
119112 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTTTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
119177 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * ** *
119242 CATAAGGACACACAATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * *
119305 AAAGTCTATATTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
119365 TGATTAGGCAGTATAAACTTATTTTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
119430 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
119451 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGACTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
119516 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGATATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
119581 TTTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
119646 CAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* **
119711 CATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
119775 AAAGTTTATGTTCGCGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
119840 TGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
**
119905 GGAAATCTTTTCTTCACCCTA
455 GGAAATCTTTTCTTTGCCCTA
119926 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
119991 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
120056 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
120120 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
120185 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * **
120250 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
120315 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
120380 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * *
120402 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
120467 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
120532 TGTTGCAAGAAAAGCATTTCTTTCAACCATTTTTTATAAAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
120597 CAAACATGAATAGTCACAGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
120662 CATAAGCATACGCGATATTGATTGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTCGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
120727 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
120791 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
120856 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
120878 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
120943 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
121008 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATTAATGTTTGTCTCTTAAATATGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * * * * * *
121073 CAAAGATGAGTAGTCACACTAATCCTCATTGTTTTTTAGATTAGGCACCATAAACTTGGACTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
** * * * *
121138 CGCAAGGATACATGATATTGACGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACTAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
121203 AAAGTGTAAGTTCATGCCTCAATTGTGCCAAACATGGATTGTAGTAATGATCTTCTTTTACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * ** * * * **
121268 TGATTAAGCACTATAAACAAAGTATTCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
121333 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * * *
121354 TTTTCCTTAAAATCAAA-TTCATCCCTTAAATAAGGCAAGCGTTGTTTCTCATAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *** **
121418 TCTTTTCAACATTGGGAACCAAAAACACATTCCTTTCATTAGGATATATGACATTGACGCTTTGG
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*** * * * * * * *
121483 TGTCATAAAAAAAGCATTTCTTTTAAACGTTTTTGACAGAATCAAAGTTTATCTCTAAAATAGGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * ** * * *
121548 CAAACATGAATTGTCATACTAATTCTCATTCTTTTTAGGATTAGCCACCATAAACTTAGTTTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
121613 CATAAGGATACATGATATTGATGGTTTAGTTTTGTGAGAAA-GCTTCCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
121677 TAAGTCTATGTTCGTGCCTCAAATGTGCCAAAC-TGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
121741 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
121806 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
121827 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCTAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
121892 TCTTTTCGAGATTGGGAACCAAAAACACATTCC--T---T----T------CA-T---GCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
121938 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
122003 CAAACATGAATAGTCACAAAAATCCTCATTCATTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
122068 CATTAGGATACACGATATTGAAGCTTTGGTTTTGTAGGAAAGGCTTTCTT--C-CC--------T
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * *
122122 AAAGTCTATGTTCATGCCTCAAAGGTGACAAACATGGATTGTAGTAATGATCTTGATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * * *
122187 TGATTAGGCAGTATAAACTTATT-TGCCTTCTTAGGA-CAA--ACA-TG--GATTTTATTTTGCA
390 TGATTAGGCAGTATAAACTTATTCT-CCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
122245 TGGAACTCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* *
122267 TTTTCCTTAAAATCAATA-TTCATTCCATAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCA
1 TTTTCCTTAAAATCAA-AGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCA
* ** * *
122331 CTCTTTTCGAGATTGGGAACCAAAAACGCATT--TTTTTATAGGATACGTGACATTGACACTTTA
65 CTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTA
* * * *
122394 TTGTCGCAAGAAAAGAATTTCTTTCAACCGTGTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
130 ATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
122459 GCAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
*
122524 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTCGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
122589 TAAAGTGTAAGTTCGTGCCTCAATTCTAG-CAAACATGGATTCCA-TAAAGGGTCTTCATTCATT
324 TAAAGTCTATGTTCGTGCCTCAAATGT-GCCAAACATGGATTCTAGT-AATGGTCTTCATTCACA
* * * * *
122652 TTGTAATTAGGCACTATAAA-TGTGTTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTT
387 TTGTGATTAGGCAGTATAAACT-TATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTT
122716 GCATGGAAATCTTTTCTTTGCCCTA
451 GCATGGAAATCTTTTCTTTGCCCTA
* * * *
122741 TTTTCCGTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
122806 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
122871 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
122936 CAAACATGAATAGTCACAGAAAACCTTATTCCTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
123001 GATAAGCATACGCGATATTAATTGTTTGGTTTCGTAAGAAAGGTTTTCTTCCCACCAATTTTGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * **
123066 AAAGTGTAAT-ATCGTGCCTTAATTGGGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
123130 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
123195 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
123217 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
123282 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* *
123347 TGTCGCAAGAAAAGCATTTC-TTCTAACCGTTTTTGATAAAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTC-AACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
*
123411 ACAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* * * * *
123476 TCATAAGCATACACGATATTGATGGTTTGGTTTCATAAG-GATGCTTTCAT-CTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
*
123539 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACATT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
123599 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
123664 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * *
123686 TTTTCCTTAAAATCAAA-TTCATCCCTTAAATAAGGCAAGCATTGTTTCTCATAACAGTCTCCCC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *** * **
123750 TCTTTTCAACATTGGGAACCAAAAACACATTCCTTTCATTAGGATATATGACATTGATGCTTTGG
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*** * * * * * *
123815 TGTCATAAAAAAAGCATTTCTTTCAAACGTTTTTGACAGAATCAAAGTTTATCTCTAAAATAGGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * * ** * * *
123880 CACACATGAATTGTCATACTAATTCTCATTCTTTTTAGGATTAGCCACCATAAACTTAGTTTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
123945 CATAAGGATACATGATATTGATGGTTTAGTTTTGTGAGAAA-GCTTCCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
124009 TAAGTCTATGTTCGTGCCTCAGATGTGCCGAACATGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
124074 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGTATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
124139 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
124160 TTTTCCTTAAAATCAAAGTTCATTCCTTAAAGAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * *
124225 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
124290 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAATGTTTATCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
124355 C-AACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGAATAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * * *
124419 CATAAGGACACACGATATTGATGGTTTGGTTTCGTAAG-TATGCTTTCAAT--AACCAATCTTGG
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTC-TTCCCACCAATTTTGG
* *
124481 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * *
124541 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTACT
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
124606 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
124628 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
124693 TCTTTACGAGATTGGGAACCAAAAATACACTCCTTTCAATAGGATACGCGATATTGATGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
124758 TATCGCAAGAAAAGCATTTCTTTCACCCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
124823 CAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTCGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
*
124888 CA-AAGCCTACACGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
*
124951 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
125016 TGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
**
125081 GGAAATCTTTTCTTCACCCTA
455 GGAAATCTTTTCTTTGCCCTA
*
125102 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
125167 GCTTTTCGAGGTTGGGAACCAAAAACACATTCCTTTCAATAAGATACGCAACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
125232 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTTTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
125297 CAAACATGAATAGTCACAAAAATCCTCATTCCTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * ** *
125362 CATAAGGACACACAATATTGATGGTTTGGTTTCGTAAG-TATGCTTTC-AACAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
125425 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGCATTCTAGTAATGG-----ATTCACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * *
125485 TGATTAGGCAGTATAAACTTATTTTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
125550 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
125571 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGACTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * *
125636 TCTTTACGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGATATGCGATATTGACACTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
125701 TTTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGCTTGTCTCTTAAATAAAA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* *
125766 CAAACATGAATAGTCACACAAATCCTCATTGTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* **
125831 CATAAGCATACATGATATTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCTAACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
125895 AAAGTTTATGTTCGCGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCATATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
125960 TGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
**
126025 GGAAATCTTTTCTTCACCCTA
455 GGAAATCTTTTCTTTGCCCTA
126046 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
126111 TCTTTTTGAGACTGGGAACCAAAAACACTTTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
126176 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTTG-TAGAATCAAAGTTTGTCTCTTAAATAAG
131 TGTTGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
126240 ACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATAAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
* *
126305 TCATAAGCAGACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTTGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * **
126370 TAAAGTGTAAGTTCGTGCCTTAATTGTGGCAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
324 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
126435 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
126500 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * *
126522 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
126587 TCTTTTTGAGACTGGGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTGACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * *
126652 TGTTGCAAGAAAAGCATTTCTTTCAACCATTTTTTATAAAATGAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
126717 CAAACATGAATAGTCACCGAAAACCTTATTCTTTTTTGGATAAGGCACCACAAACTTAGTCTTCT
196 CAAACATGAATAGTCA-CAAAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
126782 CATAAGCATACGCGATATTGATTGTTTGGTTTCGTAAGAAAGGCTTTCTTCCTACCAATTTCGGC
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * **
126847 AAAGTGTAAT-ATCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTT
325 AAAGTCT-ATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATT
* * * *
126911 GTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
389 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
126976 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* * * * *
126998 TTTTCCTTAAAATCGAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * * *
127063 TCTTTTCAAGATTGGGAACAAAAAACACATTCCTTTCATTAGGATACGCAACATTGATGCTTTGA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * * * *
127128 TGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATTAATGTTTGTCTCTTAAATATGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * * * * * *
127193 CAAAGATGAGTAGTCACACTAATCCTCATTGTTTTTTAGATTAGGCACCATAAACTTGGACTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
** * * * *
127258 CGCAAGGATACATGATATTGACGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACTAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * * * * *
127323 AAAGTGTAAGTTCATGCCTCAATTGTGCCAAACATGGATTGTAGTAATGATCTTCTTTTACGTTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * ** * * **
127388 TGATTAAGCACTATAAACAAAGTCTTCTTATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
*
127453 GAAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* * * *
127474 TTTTCCTTAAAATCAAA-TTCATCCCTTAAATAAGGCAAGCGTTGTTTCTCATAACAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *** **
127538 TCTTTTCAACATTGGGAACCAAAAACACATTCCTTTCATTAGGATATATGACATTGACGCTTTGG
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
*** * * * * * * *
127603 TGTCATAAAAAAAGCATTTCTTTTAAACGTTTTTGACAGAATCAAAGTTTATCTCTAAAATAGGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * ** * * *
127668 CAAACATGAATTGTCATACTAATTCTCATTCTTTTTAGGATTAGCCACCATAAACTTAGTTTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
127733 CATAAGGATACATGATATTGATGGTTTAGTTTTGTGAGAAA-GCTTCCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* *
127797 TAAGTCTATGTTCGTGCCTCAAATGTGCCAAAC-TGGATTCTAGTAATGATCTTCATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
*
127861 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
390 TGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCAT
127926 GGAAATCTTTTCTTTGCCCTA
455 GGAAATCTTTTCTTTGCCCTA
* *
127947 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTCAAGCATTGATTCTCATAACAATCTCTAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
128012 TCTTTTCGAGATTGGGAACCAAAAACACATTCC--T---T----T------CA-T---GCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
128058 TGTTGCAAGCAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
*
128123 CAAACATGAATAGTCACAAAAATCCTCATTCATTTTTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACAAAAA-CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * *
128188 CATTAGGATACACGATATTGAAGCTTTGGTTTTGTAGGAAAGGCTTTCTT--C-CC--------T
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * * * *
128242 AAAGTCTATGTTCATGCCTCAAAGGTGACAAACATGGATTGTAGTAATGATCTTGATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* * * *
128307 TGATTAGGCAGTATAAACTTATT-TGCCTTCTTAGGA-CAA--ACA-TG--GATTTTATTTTGCA
390 TGATTAGGCAGTATAAACTTATTCT-CCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
128365 TGGAACTCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
* *
128387 TTTTCCTTAAAATCAATA-TTCATTCCATAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCA
1 TTTTCCTTAAAATCAA-AGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCA
* ** * *
128451 CTCTTTTCGAGATTGGGAACCAAAAACGCATT--TTTTTATAGGATACGTGACATTGACACTTTA
65 CTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTA
* * * *
128514 TTGTCGCAAGAAAAGAATTTCTTTCAACCGTGTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
130 ATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * *
128579 GCAAACATGAATAGTCATACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
195 ACAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTC
*
128644 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTCGG
259 TCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGG
* * * * * * **
128709 TAAAGTGTAAGTTCGTGCCTCAATTCTAG-CAAACATGGATTCCA-TAAAGGGTCTTCATTCATT
324 TAAAGTCTATGTTCGTGCCTCAAATGT-GCCAAACATGGATTCTAGT-AATGGTCTTCATTCACA
* * * * * *
128772 TTGTAATTAGGCACTATAAA-TGTGTTCTTCTCATTAGGATAAATGATATCGATGATTTTCTTTT
387 TTGTGATTAGGCAGTATAAACT-TATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTT
128836 GCATGGAAATCTTTTCTTTGCCCTA
451 GCATGGAAATCTTTTCTTTGCCCTA
* * * * * *
128861 TTTTCCTTAACATCAAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAATAGTCTCCAC
1 TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * *
128926 TCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTAAATAGGATACACGACATTAACGCTTTAA
66 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
* * *
128991 TGTCGCAAGAAAAGTATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
131 TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * * * *
129056 CGAACATGAATAGTCACACTAATCATTATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCT
196 CAAACATGAATAGTCACA-AAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCT
* * * *
129121 CATAAGGATCCACGATATTGATGGTTTGGTTTCGTAAGAAA-GATTCCTTCCCACCAATTTTGGT
260 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
* * * *
129185 AAAGTCTATGTTCGTGCCTCAAATGTGTCAAACATAGATTCTAGTAATGATCTTTATTCACATTG
325 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTG
* *
129250 TGATTAGGCAGTGTAAACTTATTCT-CTCCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
390 TGATTAGGCAGTATAAACTTATTCTCCT-CCTTAGGATAAATGATATTGATGATTTTCTTTTGCA
129314 TGGAAATCTTTTCTTTGCCCTA
454 TGGAAATCTTTTCTTTGCCCTA
*
129336 TTTTTCTTA
1 TTTTCCTTA
129345 TGTAGACACC
Statistics
Matches: 83987, Mismatches: 7773, Indels: 1814
0.90 0.08 0.02
Matches are distributed among these distances:
440 248 0.00
441 2 0.00
442 2 0.00
443 6 0.00
445 66 0.00
446 124 0.00
447 2 0.00
453 8 0.00
454 80 0.00
455 296 0.00
456 77 0.00
457 423 0.01
458 11 0.00
459 6 0.00
460 9 0.00
461 161 0.00
462 1 0.00
463 2 0.00
464 1 0.00
465 387 0.00
466 449 0.01
467 431 0.01
468 4132 0.05
469 17597 0.21
470 2360 0.03
471 1429 0.02
472 2753 0.03
473 2368 0.03
474 4994 0.06
475 15942 0.19
476 29332 0.35
477 288 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (475 bp):
TTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAA
TGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
CAAACATGAATAGTCACAAAAACCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTC
ATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTA
AAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGGTCTTCATTCACATTGT
GATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCATG
GAAATCTTTTCTTTGCCCTA
Found at i:59835 original size:158 final size:159
Alignment explanation
Indices: 49194--62211 Score: 800
Period size: 159 Copynumber: 82.4 Consensus size: 159
49184 CCTCATTGTT
* * * * * * *
49194 TTTTG-GATTAGGGACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * ** *
49258 CGTAAGAAAGG--TTTCTT-CTAACCAATTTTGGTAAAGTTTATGTTCGTGCCTCAAATGTGCCA
66 CGCAAGAAAGGCATTTCTTCCT-ACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
*
49320 AACATGGATTCTAGTAAT-GATCTTTATTCA
130 AACATGGATTCTAGTAATAG-TCTTCATTCA
* * * * * * **
49350 TATTGTGATTAGGCAGC-ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTT
1 TTTTGTGATTAGGCA-CTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * * ** * ** * *
49414 TTGCATGGAAA-TCTTTTCTTCGC--CCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAG
65 TCGCA-AGAAAGGCATTTCTTC-CTACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAG
* * * * * * * *
49476 GCAAGCATTGATTCTCA-TAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * *** * * * **
49509 TTTTGAGACTGGGAACCAAAAACACT-TTCTTTTCAATAGGATACGCGACATTGACGCTTTAATG
1 TTTTGTGATTAGGCACTATAAACA-TATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGT-
* * * ** * ** *
49573 TT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTGTAGAA-TCAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* *
49635 ACAAACATGAATAGTCACAG-AA-A-TCCTT-ATTC-
127 ACAAACATGGAT--TC-TAGTAATAGT-CTTCATTCA
* * * * * * * * * *
49667 TTTTTTGGATAAGGCACCATAAACTTAGTCTTCTCATAAGCAGACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * ** *
49732 TCGTAAGAGAGGC-TTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAATTGTGGCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
* *
49796 AACATGGATTCTAGTAATGGCCTTCATTCA
130 AACATGGATTCTAGTAATAGTCTTCATTCA
* * **
49826 TTTTGTGATTAGGCACTATAAACTTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * * ** * * ** *
49891 TGCACGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AATTTAATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * * *
49952 GCAAGCATTGATTCTCA-TAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * ** ** * * * **
49985 TTTTGAGACT-GGGACCCAAAAACACATTCCTT-TCAAAAGGATACGTGACATTGACGCTTTAAT
1 TTTTGTGATTAGGCA-CTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * ** ** * * *
50048 GTT-GCAAGAAAAGCATTTCTTTCTACCGTTTTTTATAAAATGAAAGTTTGT-CTCTTAAATAAG
64 -TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGC-CTTAAATAAG
* **
50111 ACAAACATGAATAGT-TACAG-AA-AACCTT-ATTC-
127 ACAAACATGGAT--TCT--AGTAATAGTCTTCATTCA
* * * * * * * * * *** *
50143 TTTTTTGGATAAGCCACCACAAACTTAGTCTTCTCATAAGCATACGCGATATTGATTGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * * * **
50208 TTGTAAGAAAGG-TTTTCTTCCCACCAATTTTGGCAAAGTGTAA-TATCGTGCCTTAATTGTGAC
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGT-TCGTGCCTTAAATAAGAC
*
50271 AAACATGGATTCTAGTAATGGTCTTCATTCA
129 AAACATGGATTCTAGTAATAGTCTTCATTCA
* * * **
50302 TTTTGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * * ** * * ** *
50367 TGCATGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AATTTAATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * *
50428 GCAAGCATTGATTCTCGTAACAGTCTCCACTC-
127 ACAAACATGGATTCTAGTAATAGTCTTCATTCA
** * * * * * **** * * *
50460 TTTTCAAGATTGGGAACAAAAAACACATTCCTT-TCATTAGGATACGCAACATTGATGCTTTGAT
1 TTTT-GTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * * ** * ** *
50524 GTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* * * * * * *
50587 ACAAACACGAATAGTC-A-CAAAAATCCTCATTCC
127 ACAAACATGGAT--TCTAGTAATAGTCTTCATTCA
* * * * * * *
50620 TTTT-TGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * * * * * **
50684 TCGAAAGAAAGGC-TTTTTTCCCACCAATTTTGGCAAAGTCTATGTTCATGCCTCAAATGTGACA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
* * * * * *
50748 AATAAGGATTGTGGT-ATTGATCTTCTTTCA
130 AACATGGATTCTAGTAATAG-TCTTCATTCA
** * * * * * * **
50778 CATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* ** * * * * ** * ** * * *
50843 TGCTTGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGT
66 CGC-AAGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAGA
** * * * * *
50905 CAGGCATTGATTCTCA-TAACAATCTCCACTC-
128 CAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * * *** * *** **
50936 TTTACGAGATTGGGAACCAAAAATACATTCCTT-TCAATAGGATATGCGACATTGACACTTTAAT
1 TTT-TGTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * ** * **
51000 TTCGCAAGAAAAGCATTTCTTTCTACCGTTTTTGATAGAA-TCAAAGCTT-GT-CTCTTAAATAA
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAG-TTCGTGC-CTTAAATAA
* * * * * *
51062 AACAAACAT-GA--ATAGTCACACAAATCCTCATT-G
126 GACAAACATGGATTCTAGT-A-A-TAGTCTTCATTCA
* * * * * * *
51095 TTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * ** *
51160 TCGTAAGAAAGG--TTTCTT-CTAACCAATTTTGGTAAAGTTTATGTTCGTGCCTCAAATGTGCC
65 TCGCAAGAAAGGCATTTCTTCCT-ACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGAC
51222 AAACATGGATTCTAGTAAT-GATCTTCATTCA
129 AAACATGGATTCTAGTAATAG-TCTTCATTCA
* * * * * * **
51253 TATTGTGATTAGGCAGC-ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTT
1 TTTTGTGATTAGGCA-CTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * * ** * ** * *
51317 TTGCATGGAAA-TCTTTTCTTCGC--CCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAG
65 TCGCA-AGAAAGGCATTTCTTC-CTACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAG
* * * * * * * *
51379 GCAAGCATTGATTCTCA-TAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * *** * * * **
51412 TTTTGAGACT-GGAACCAAAAACACT-TTCTTTTCAATAGGATACGCGACATTGACGCTTTAATG
1 TTTTGTGATTAGGCACTATAAACA-TATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGT-
* * * ** * ** *
51475 TT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTGTAGAA-TCAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* *
51537 ACAAACATGAATAGTCACAG-AA-A-TCCTT-ATTC-
127 ACAAACATGGAT--TC-TAGTAATAGT-CTTCATTCA
* * * * * * * * * *
51569 TTTTTTGGATAAGGCACCATAAACTTAGTCTTCTCATAAGCAGACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * ** *
51634 TCGTAAGAGAGGC-TTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAATTGTGGCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
51698 AACATGGATTCTAGTAAT-GATCTTCATTCA
130 AACATGGATTCTAGTAATAG-TCTTCATTCA
* * * * * * * **
51728 TATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* ** * * * ** * ** * * *
51793 TGCTTGGAAA-TCTTTTCTT--TACCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGT
66 CGC-AAGAAAGGCATTTCTTCCTA-CCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAGA
* * * * * *
51855 CAAGCATTGATTCTCA-TAACAATCTCCACTC-
128 CAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * * *** * *** **
51886 TTTACGAGATTGGGAACCAAAAATACATTCCTT-TCAATAGGATATGCGACATTGACACTTTAAT
1 TTT-TGTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * ** * **
51950 TTCGCAAGAAAAGCATTTCTTTCTACCGTTTTTGATAGAA-TCAAAGCTT-GT-CTCTTAAATAA
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAG-TTCGTGC-CTTAAATAA
* * * * * *
52012 AACAAACAT-GA--ATAGTCACACAAATCCTCATT-G
126 GACAAACATGGATTCTAGT-A-A-TAGTCTTCATTCA
* * * * * * *
52045 TTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * ** *
52110 TCGTAAGAAAGG--TTTCTT-CTAACCAATTTTGGTAAAGTTTATGTTCGTGCCTCAAATGTGCC
65 TCGCAAGAAAGGCATTTCTTCCT-ACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGAC
52172 AAACATGGATTCTAGTAAT-GATCTTCATTCA
129 AAACATGGATTCTAGTAATAG-TCTTCATTCA
* * * * * * **
52203 TATTGTGATTAGGCAGC-ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTT
1 TTTTGTGATTAGGCA-CTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * * ** * ** * *
52267 TTGCATGGAAA-TCTTTTCTTCGC--CCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAG
65 TCGCA-AGAAAGGCATTTCTTC-CTACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAG
* * * * * * * *
52329 GCAAGCATTGATTCTCA-TAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * *** * * * **
52362 TTTTGAGACTGGGAACCAAAAACACT-TTCTTTTCAATAGGATACGCGACATTGACGCTTTAATG
1 TTTTGTGATTAGGCACTATAAACA-TATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGT-
* * * ** * ** *
52426 TT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTGTAGAA-TCAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* *
52488 ACAAACATGAATAGTCACAG-AA-A-TCCTT-ATTC-
127 ACAAACATGGAT--TC-TAGTAATAGT-CTTCATTCA
* * * * * * * * * *
52520 TTTTTTGGATAAGGCACCATAAACTTAGTCTTCTCATAAGCAGACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * ** *
52585 TCGTAAGAGAGGC-TTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAATTGTGGCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
* *
52649 AACATGGATTCTAGTAATGGCCTTCATTCA
130 AACATGGATTCTAGTAATAGTCTTCATTCA
* * **
52679 TTTTGTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * * ** * * ** *
52744 TGCACGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AATTTAATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * * *
52805 GCAAGCATTGATTCTCA-TAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * ** ** * * * **
52838 TTTTGAGACT-GGGACCCAAAAACACATTCCTT-TCAAAAGGATACGTGACATTGACGCTTTAAT
1 TTTTGTGATTAGGCA-CTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * ** ** * *
52901 GTT-GCAAGAAAAGCATTTCTTTCTACCGTTTTTTATAGAA-TGAAAGTTTGT-CTCTTAAATAA
64 -TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAA
* **
52963 GACAAACATGAATAGTCATAG-AA-AACCTT-ATTC-
126 GACAAACATGGAT--TC-TAGTAATAGTCTTCATTCA
* * * * * * * * * *** *
52996 TTTTTTGGATAAGCCACCACAAACTTAGTCTTCTCATAAGCATACGCGATATTGATTGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * * * **
53061 TTGTAAGAAAGG-TTTTCTTCCCACCAATTTTGGCAAAGTGTAA-TATCGTGCCTTAATTGTGAC
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGT-TCGTGCCTTAAATAAGAC
*
53124 AAACATGGATTCTAGTAATGGTCTTCATTCA
129 AAACATGGATTCTAGTAATAGTCTTCATTCA
* * * **
53155 TTTTGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * * *** * * ** *
53220 TGCATGGAAA-TCTTTTCTT--TGCCCTATTTCCCTTAAAATCG-AATTTAATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTT-TGGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * *
53281 GCAAGCATTGATTCTCGTAACAGTCTCCACTC-
127 ACAAACATGGATTCTAGTAATAGTCTTCATTCA
** * * * * * **** * * *
53313 TTTTCAAGATTGGGAACAAAAAACACATTCCTT-TCATTAGGATACGCAACATTGATGCTTTGAT
1 TTTT-GTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* ** * ** * ** *
53377 GTCGCAAGAAAAACATTTCTTCCAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* * * * * *
53440 ACAAACATGAATAGTC-A-CAAAAATCCTCATTCC
127 ACAAACATGGAT--TCTAGTAATAGTCTTCATTCA
* * * * * * *
53473 TTTT-TGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
** * * * * * * ** *
53537 TCATAAG-TATGC-TTTCAT-CTACCAATTTTGGTAAAGTCTATGTTCGTGCCTGAAATTTGCCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
* *
53599 AACATGCATTCTAGTAAT-G----GATTCA
130 AACATGGATTCTAGTAATAGTCTTCATTCA
** * * * * * **
53624 CGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* ** * * * * ** ** * * * *
53689 TGCTTGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAGTCAAAGTTCCTTCCTTAAATCAGG
66 CGC-AAGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAGA
* * * * * * *
53751 CAAGCATTGATTCTCA-TAACAATCTCCACTCT
128 CAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * *** * * * **
53783 TTTTGAGACTGGGAACCAAAAACACT-TTC-T-TCAATAGGATACGCGACATTGACGCTTTAATG
1 TTTTGTGATTAGGCACTATAAACA-TATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGT-
* * * ** * ** *
53845 TT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTGTAGAA-TCAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* * * *
53907 ACAAACATGAATAGTC-A-CAAAAATCCTT-ATTC-
127 ACAAACATGGAT--TCTAGTAATAGT-CTTCATTCA
* * * * * * * * * *
53939 TTTTTTGGATAAGGCACCATAAACTTAGTCTTCTCATAAGCAGACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * ** *
54004 TCGTAAGAAAGGC-TTTCTTCCTACCAATTTCGGTAAAGTGTAAGTTTGTGCCTTAATTGTGGCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
*
54068 AACATGGATTCTAGTAATGGTCTTCATTCA
130 AACATGGATTCTAGTAATAGTCTTCATTCA
* * * **
54098 TTTTGTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATGGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * ** * ** * * *
54163 TGCATGGAAA-TCTTTTCTT-C-ACCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGG
66 CGCA-AGAAAGGCATTTCTTCCTA-CCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAGA
* * * * * * *
54225 CAAGCATTGATTCTCA-TAACAATCTCCACTCT
128 CAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * *** ** * * **
54257 TTTTGAGA-CAGGGAACCA-AACACACT-TTCTTTTCAATAGGATACGCGGCATTGACGCTTTAA
1 TTTTGTGATTA-GGCACTATAA-ACA-TATTCTTCTCATTAGGATAAATGATATTGATGGTTTGG
* * * ** * ** * *
54319 TGTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTGTAGAA-TCAAAGTTTGT-CTCCTAAATA
63 T-TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATA
* * *
54381 AGACAAAGATGAATAGTCATAG-AA-A-TCCTT-ATTCT
125 AGACAAACATGGAT--TC-TAGTAATAGT-CTTCATTCA
** * * * * * * * *
54416 TTTTCAGATTAGGCACCATAAACTTAGTATTCTCATAAGCATACACGATATTGATGGTTTGGTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * * * * **
54481 CGAAAGAAAGGC-TTTTTTCCCACCAATTTTGGCAAAGTCTATGTTCATGCCTCAAATGTGACAA
66 CGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACAA
* * * * * *
54545 ATAGGGATTGTGGT-ATTGATCTTCTTTCA
131 ACATGGATTCTAGTAATAG-TCTTCATTCA
** * * * * * * **
54574 CATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* ** * * * * ** * ** * * *
54639 TGCTTGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AAGTTTATTCCTCAAATAAC
66 CGC-AAGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * *
54700 TCAAGCATTGATTCTCA-TAACAATCTCCACTC-
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * * *** * *** **
54732 TTTACGAGATTGGGAACCAAAAATACATTCCTT-TCAATAGGATATGCGACATTGACACTTTAAT
1 TTT-TGTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * * * ** * **
54796 TTCGTAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGCTT--T-CTCTTAAATAA
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAG-TTCGTGC-CTTAAATAA
* * * * * *
54857 AACAAACAT-GA--ATAGTCACACAAATCCTCATT-G
126 GACAAACATGGATTCTAGT-A-A-TAGTCTTCATTCA
* * * * * * * *
54890 TTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGATTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * ** *
54955 TCGTAAGAAAGG--TTTCTT-CTAACCAATTTTGGTAAAGTTTATGTTCGTGCCTCAAATGTGCC
65 TCGCAAGAAAGGCATTTCTTCCT-ACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGAC
55017 AAACATGGATTCTAGTAAT-GATCTTCATTCA
129 AAACATGGATTCTAGTAATAG-TCTTCATTCA
* * * * * * **
55048 TATTGTGATTAGGCAGC-ATAAACTTATTCTCCTCCTTAGGATAAATGATATAGATGATTTTCTT
1 TTTTGTGATTAGGCA-CTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * * ** * ** * *
55112 TTGCATGGAAA-TCTTTTCTTCGC--CCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAG
65 TCGCA-AGAAAGGCATTTCTTC-CTACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAG
* * * * * * * *
55174 GCAAGCATTGATTCTCA-TAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * *** * * * **
55207 TTTTGAGACTGGGAACCAAAAACACT-TTCTTTTCAATAGGATACGCGACATCGATGCTTTAATG
1 TTTTGTGATTAGGCACTATAAACA-TATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGT-
* * * ** * ** *
55271 TT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTGTAGAA-TCAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* *
55333 ACAAACATGAATAGTCACAG-AA-A-TCCTT-ATTC-
127 ACAAACATGGAT--TC-TAGTAATAGT-CTTCATTCA
* * * * * * * * * * **
55365 TTTTTTGGATAAAGCACCATAAACTTAGTCTTCTCATAAGCAGACACAATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * ** *
55430 TCGTAAGAAAGGC-TTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAATTGTGGCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
* *
55494 AACATCGATTCTAGTAATGGTCTTCATTCA
130 AACATGGATTCTAGTAATAGTCTTCATTCA
* * **
55524 TTTTGTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * * ** * * ** *
55589 TGCATGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AATTTAATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * * * *
55650 GCAAGCATTGATTCTCA-CAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * ** ** * * * **
55683 TTTTGAGACTGGGAACCAAAAACACATTCCTT-TCAAAAGGATACGTGACATTGACGCTTTAATG
1 TTTTGTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT-
* * * ** ** * * *
55747 TT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAA-TGAAAGTTTGT-CTCTTAAATCAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* * **
55809 ACAAACATGAATAGTCACAG-AA-AACCTT-ATTC-
127 ACAAACATGGAT--TC-TAGTAATAGTCTTCATTCA
* * * * * * * * * *** * *
55841 TTTTTTGGATAAGCCACCACAAACTTAGTCTTCTCATAAGCATACGCGATATTGGTTGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
** * * * * **
55906 TCATAAGAAAGG-TTTTCTTCCCACCAATTTTGGCAAAGTGTAA-TATCGTGCCTTAATTGTGAC
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGT-TCGTGCCTTAAATAAGAC
*
55969 AAACATGGATTCTAGTAATGGTCTTCATTCA
129 AAACATGGATTCTAGTAATAGTCTTCATTCA
* * * **
56000 TTTTGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGAT-ATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * * ** * * ** *
56064 TGCATGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AATTTAATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * *
56125 GCAAGA-ATTGATTCTCGTAACAGTCTCCACTC-
127 ACAA-ACATGGATTCTAGTAATAGTCTTCATTCA
** * * * * * **** * * *
56157 TTTTCAAGATTGGGAACAAAAAACACATTCCTT-TCATTAGGATACGCAACATTGATGCTTTGAT
1 TTTT-GTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * * *** * ** *
56221 GTCGCAAGAAAAGCATTTCTTCCAACTGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* * * *
56284 ACAAACAT-GA--ATAGTCACAAAGATCCTCATTCC
127 ACAAACATGGATTCTAGT-A-ATAG-TCTTCATTCA
* * * * * * * *
56317 TTTT-TGGATTAGGCACCATAAACTTAGTGTTCTCATAAGCATACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
** * * * * * * ** *
56381 TCATAAG-TATGC-TTTCAT-CTACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
* *
56443 AACATGCATTCTAGTAATGGAT-TT-A--C-
130 AACATGGATTCTAGTAATAG-TCTTCATTCA
* * * * * * **
56469 -GTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* ** * * * * ** ** * ** * * *
56533 TGCCTGGAAA-TCTTTTCTT-TTCCCTTTTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTC
66 CG-CAAGAAAGGCATTTCTTCCTACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAGAC
** * * * *
56596 AGGCATTGATTCTCA-TAATAATCTCCACTC-
129 AAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * **** * * **
56626 TTTTCGAGATTGGGAACCAAAAACACATTCCTT-TCAATGGGATACGCAACT-TTGACGCTTTAA
1 TTTT-GTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGA-TATTGATGGTTTGG
* * * * * * ** *
56689 TGTT-GCAAGAAAAGTATTTCTTTCAACCATTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATA
63 T-TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATA
* * *
56751 AGACAAACAT-GA--GTAGTTACACTAATCCTCATTC-
125 AGACAAACATGGATTCTAG-TA-A-TAGTCTTCATTCA
* * * * * * * *
56785 TTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATTAGCATACACGATATTGATGGTTTGGCT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * * * ** *
56850 TCGTAAGAAAGG--TTTCTTCCCACCCATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
56913 AACATGGATTCTAGTAAT-GATCTTCATTCA
130 AACATGGATTCTAGTAATAG-TCTTCATTCA
** * * * * * * **
56943 CATTGTGATTAGGCAATATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * ** * * * * *
57008 TGCATGGAAA-TCTTTTCTT-C-ACCCTATTTTCCTTAAAATCG-AAGTTCATTCCTCAAATAAC
66 CGCA-AGAAAGGCATTTCTTCCTA-CCAATTTT-GGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * *
57069 TCAAGCATTGATTCTCA-TAACAATCTCCACTC-
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * * * * * *** **
57101 TTTACGAGATTGGGAACCAAAAATACATTCCTT-TCAATAGGATATACGACATTGACACTTTAAT
1 TTT-TGTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * * * ** * * * ** *
57165 TTCGTAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGATTCAAAGCTT-GT-CTCTTAAATAAA
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAG-TTCGTGC-CTTAAATAAG
* * * * *
57228 ACAAACAT-GA--ATAGTCACACAAATCCTCATT-G
127 ACAAACATGGATTCTAGT-A-A-TAGTCTTCATTCA
* * * * * * *
57260 TTTTTTGGATTAGGCACCATAAAC-TTTGTCTTCTCATAAGCATACATGATATTGATGTTTTGGT
1 TTTTGT-GATTAGGCACTATAAACATAT-TCTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * * * ** *
57324 TTCGTAAGAAAGG--TTTCTT-CTAACCAATTTTGGTAAAGTTTATGTTCGTGCCTCAAATGTGC
64 TTCGCAAGAAAGGCATTTCTTCCT-ACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGA
57386 CAAACATGGATTCTAGTAAT-GATCTTCATTCA
128 CAAACATGGATTCTAGTAATAG-TCTTCATTCA
* * * * * * **
57418 TATTGTGATTAGGCAGC-ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTT
1 TTTTGTGATTAGGCA-CTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * ** * ** * * *
57482 TTGCATGGAA---A--TCTT-C-ACCCCATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGG
65 TCGCAAGAAAGGCATTTCTTCCTA-CCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAGA
* * * * * * *
57540 CAAGCATTGATTCTCA-TAACAATCTCCACTCT
128 CAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * *** * * * **
57572 TTTTGAGA-CAGGGAACCA-AACACACT-TTCTTTTCAATAGGATACGCGACATTGACGCTTTAA
1 TTTTGTGATTA-GGCACTATAA-ACA-TATTCTTCTCATTAGGATAAATGATATTGATGGTTTGG
* * ** * ** * * *
57634 TGTT-GCAAGCAAA-GCATTTCTTTCAACCGTTTTTTGTAGAA-TCAAAGTTTGT-CTCCTAGAT
63 T-TTCGCAAG-AAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAAT
* * *
57695 AAGACAAAGATGAATAGTCATAG-AA-A-TCCTT-ATTCT
124 AAGACAAACATGGAT--TC-TAGTAATAGT-CTTCATTCA
** * * * * * * * *
57731 TTTTCAGATTAGGCACCATAAACTTAGTATTCTCATAAGCATACACGATATTGATGGTTTGGTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * * * * **
57796 CGAAAGAAAGGC-TTTTTTCCCACCAATTGT-GTCAAAGTCTATGTTCATGCCTCAAATGTGACA
66 CGCAAGAAAGGCATTTCTTCCTACCAATTTTGGT-AAAGTGTAAGTTCGTGCCTTAAATAAGACA
* * * * * * *
57859 AATAGGGATTGTGGTATTGGTCTTCTTTCA
130 AACATGGATTCTAGTAATAGTCTTCATTCA
** * * * * * * **
57889 CATTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* ** * * * * ** * ** * * *
57954 TGCTTGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGG
66 CGC-AAGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAGA
* * ** * * *
58016 CAAGCATTGATTCTCA-TAGCAATCTCCACTC-
128 CAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * * * *** * **
58047 TTTACGAGATTGGGAACCAAAAATACACTCCTT-TCAATAGGATACGCGATATTGATGCTTTAAT
1 TTT-TGTGATTAGGCACTATAAACATA-TTCTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * * * ** * ** *
58111 GTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* * * * * *
58174 ACAAACATGAATAGTC-A-CAAAAATCCTCATTCC
127 ACAAACATGGAT--TCTAGTAATAGTCTTCATTCA
* * * * * * *
58207 TTTT-TGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGACACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * ** * * * * ** *
58271 TCGTAAG-TATGC-TTTC-AACAACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
*
58333 AACATGCATTCTAGTAATAG-----ATTCA
130 AACATGGATTCTAGTAATAGTCTTCATTCA
** * * * * * * **
58358 CGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* ** * * * * ** * * * * *
58423 TGCTTGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AAGTTCATTCCTCAAATAAC
66 CGC-AAGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * *
58484 TCAAGCATTGATTCTCA-TAACAATCTCCACTC-
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * * *** * *** **
58516 TTTACGAGATTGGGAACCAAAAATACATTCCTT-TCAATAGGATATGCGACATTGACACTTTAAT
1 TTT-TGTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * * * ** * **
58580 TTCGTAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGCTT-GT-CTCTTAAATAA
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAG-TTCGTGC-CTTAAATAA
* * * * * *
58642 AACAAACAT-GA--ATAGTCACACAAATCCTCATT-G
126 GACAAACATGGATTCTAGT-A-A-TAGTCTTCATTCA
* * * * * * *
58675 TTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * ** *
58740 TCGTAAGAAAGG--TTTCTT-CTAACCAATTTTGGTAAAGTTTATGTTCGTGCCTCAAATGTGCC
65 TCGCAAGAAAGGCATTTCTTCCT-ACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGAC
58802 AAACATGGATTCTAGTAAT-GATCTTCATTCA
129 AAACATGGATTCTAGTAATAG-TCTTCATTCA
* * * * * * **
58833 TATTGTGATTAGGCAGC-ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTT
1 TTTTGTGATTAGGCA-CTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * * ** * ** * *
58897 TTGCATGGAAA-TCTTTTCTTCGC--CCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAG
65 TCGCA-AGAAAGGCATTTCTTC-CTACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAG
* * * * * * * *
58959 GCAAGCATTGATTCTCA-TAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * ** ** * * * **
58992 TTTTGAGACTGGGAACCAAAAACACATTCCTT-TCAAAAGGATACGTGACATTGACGCTTTAATG
1 TTTTGTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT-
* * ** ** * *
59056 TT-GCAAGAAAAGCATTTCTTTCTACCGTTTTTTATAGAA-TGAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* * **
59118 ACAAACATGAATAGTCACAG-AA-AACCTT-ATTC-
127 ACAAACATGGAT--TC-TAGTAATAGTCTTCATTCA
* * * * * * * * * *** *
59150 TTTTTTGGATAAGCCACCACAAACTTAGTCTTCTCATAAGCATACGCGATATTGATTGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * * * **
59215 TTGTAAGAAAGG-TTTTCTTCCCACCAATTTTGGCAAAGTGTAA-TATCGTGCCTTAATTGTGAC
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGT-TCGTGCCTTAAATAAGAC
*
59278 AAACATGGATTCTAGTAATGGTCTTCATTCA
129 AAACATGGATTCTAGTAATAGTCTTCATTCA
* * * **
59309 TTTTGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * * ** * * ** *
59374 TGCATGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AATTTAATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * * *
59435 GCAAGCATTGATTCTCGTAACAGCCTCCACTC-
127 ACAAACATGGATTCTAGTAATAGTCTTCATTCA
** * * * * * * *
59467 TTTTCAAGATTGGGAACAAAAAACACATTCCTT-TCATTAGGAT--ATGCAACATTGATGCTTTG
1 TTTT-GTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATG--ATATTGATGGTTTG
* * * * ** * ** *
59529 ATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATA
62 GTTTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATA
* * * * * *
59592 AGACAAACATGAATAGTC-A-CAAAAATCCTCATTCG
125 AGACAAACATGGAT--TCTAGTAATAGTCTTCATTCA
* * * * * * * * *
59627 TTTT-TGGATAAGGCACCATAAACTTAGTCTTCTCATAAGCAGACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * ** *
59691 TCGTAAGAAAGGC-TTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAATTGTGGCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
*
59755 AACATGGATTCTAGTAATTGTCTTCATTCA
130 AACATGGATTCTAGTAATAGTCTTCATTCA
* **
59785 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * ** * * * ** * ** * * * *
59850 TGCACGAAAATCTTTTCTT--TGCCCTATTTTCCTTAAAATCAAAGCTCATTCCTTAAATAAGGC
66 CGCAAGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAGAC
** * ** * * *
59913 ATGCATTGATTCTCA-TAGCAATCTCCACTC-
129 AAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * * *** * *** **
59943 TTTACGAGATTGGGAACCAAAAATACATTCCTT-TCAATAGGATATGCGACATTGACACTTTAAT
1 TTT-TGTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * * ** * **
60007 TTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGCTT-GT-CTCTTAAATAA
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAG-TTCGTGC-CTTAAATAA
* * * * * *
60069 AACAAACAT-GA--ATAGTCACACAAATCCTCATT-G
126 GACAAACATGGATTCTAGT-A-A-TAGTCTTCATTCA
* * * * * * *
60102 TTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * ** *
60167 TCGTAAGAAAGG--TTTCTT-CTAACCAATTTTGGTAAAGTTTATGTTCGTGCCTCAAATGTGCC
65 TCGCAAGAAAGGCATTTCTTCCT-ACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGAC
60229 AAACATGGATTCTAGTAAT-GATCTTCATTCA
129 AAACATGGATTCTAGTAATAG-TCTTCATTCA
* * * * * * **
60260 TATTGTGATTAGGCAGC-ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTT
1 TTTTGTGATTAGGCA-CTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * ** * ** * *
60324 TTGCAAGGAAA-TCTTTTCTTCGC--CCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAG
65 TCGCAA-GAAAGGCATTTCTTC-CTACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAG
* * * * * * * *
60386 GCAAGCATTGATTCTCA-TAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * * *** * * * **
60419 TTTTGAGACTGGGAACCAAAAACACT-TTCTTTTCAATAGGATACGCGACATTGACGCTTTAATG
1 TTTTGTGATTAGGCACTATAAACA-TATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGT-
* * * ** * ** * *
60483 TT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTGTAGAA-TCAAAGTTTGT-CTCTAAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* *
60545 ACAAACATGAATAGTCACAG-AA-A-TCCTT-ATTC-
127 ACAAACATGGAT--TC-TAGTAATAGT-CTTCATTCA
* * * * * * * * * *
60577 TTTTTTGGATAAGGCACCATAAACTTAGTCTTCTCATAAGCAGACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * ** *
60642 TCGTAAGAAAGGC-TTTCTTCCTACCAATTTCGGTAAAGTGTAAGTTTGTGCCTTAATTGTGGCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
*
60706 AACATGGATTCTAGTAATGGTCTTCATTCA
130 AACATGGATTCTAGTAATAGTCTTCATTCA
* * **
60736 TTTTGTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * * ** * * ** *
60801 TGCATGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AATTTTATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * * * *
60862 GCAAGCATTGATTCTCA-CAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * ** ** * * * **
60895 TTTTGAGACTGGGAACCAAAAACACATTCCTT-TCAAAAGGATACGTGACATTGACGCTTTAATG
1 TTTTGTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT-
* * * ** ** * * * *
60959 TT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAA-TGAAAGTTTGT-CTCTTAAGTCAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* * **
61021 ACAAACATGAATAGTCACAG-AA-AACCTT-ATTC-
127 ACAAACATGGAT--TC-TAGTAATAGTCTTCATTCA
* * * * * * * * *** * *
61053 TTTTTTGGATAAGGCACCACAAACTTAGTCTTCTCATAAGCATACGCGATATTGGTTGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
** * * * * **
61118 TCATAAGAAAGG-TTTTCTTCCCACCAATTTTGGCAAAGTGTAA-TATCGTGCCTTAATTGTGAC
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGT-TCGTGCCTTAAATAAGAC
*
61181 AAACATGGATTCTAGTAATGGTCTTCATTCA
129 AAACATGGATTCTAGTAATAGTCTTCATTCA
* * ** **
61212 TTTTGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATTATTTTTTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* * * * * * ** * * ** *
61277 TGCATGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AATTTAATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTCGTGCCTTAAATAAG
* * * * * *
61338 GCAAGA-ATTGATTCTCGTAACAGTCTCCACTC-
127 ACAA-ACATGGATTCTAGTAATAGTCTTCATTCA
** * * * * * **** * * *
61370 TTTTCAAGATTGGGAACAAAAAACACATTCCTT-TCATTAGGATACGCAACATTGATGCTTTGAT
1 TTTT-GTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGATATTGATGGTTTGGT
* * * *** * ** *
61434 GTCGCAAGAAAAGCATTTCTTCCAACTGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATAAG
* * * *
61497 ACAAACAT-GA--ATAGTCACAAAGATCCTCATTCC
127 ACAAACATGGATTCTAGT-A-ATAG-TCTTCATTCA
* * * * * * *
61530 TTTT-TGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
** * * * * * * ** *
61594 TCATAAG-TATGC-TTTCAT-CTACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
* *
61656 AACATGCATTCTAGTAAT-G----GATTCA
130 AACATGGATTCTAGTAATAGTCTTCATTCA
** * * * * * **
61681 CGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
* ** * * * * ** ** * ** * * *
61746 TGCTTGGAAA-TCTTTTCTT-TTCCCTTTTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGTC
66 CGC-AAGAAAGGCATTTCTTCCTACCAATTTT-GGTAAAGTGTAAGTTCGTGCCTTAAATAAGAC
** * * * *
61809 AGGCATTGATTCTCA-TAATAATCTCCACTC-
129 AAACATGGATTCT-AGTAATAGTCTTCATTCA
* * * * * * * **** * * **
61839 TTTTCGAGATTGGGAACCAAAAACACATTCCTT-TCAATAGGATACGCAACT-TTGACGCTTTAA
1 TTTT-GTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATAAATGA-TATTGATGGTTTGG
* * * * * * ** *
61902 TGTT-GCAAGAAAAGTATTTCTTTCAACCATTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATA
63 T-TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTCGTGC-CTTAAATA
*
61964 AGACAAACATGAGTAGTTAC-ACTAAT--TC-TCATTC-
125 AGACAAACATG-G-A-TT-CTAGTAATAGTCTTCATTCA
* * * * * * * *
61998 TTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATTAGCATACACGATATTGATGGTTTGGCT
1 TTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTT
* * * * * ** *
62063 TCGTAAGAAAGG--TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACA
62126 AACATGGATTCTAGTAAT-GATCTTCATTCA
130 AACATGGATTCTAGTAATAG-TCTTCATTCA
** * * * * * *
62156 CATTGTGATTAGGCAATATAAACTTATTCTCCTCCTGAGGATAAATGATATGGATG
1 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATG
62212 ATTTTCTTTT
Statistics
Matches: 8798, Mismatches: 3241, Indels: 1645
0.64 0.24 0.12
Matches are distributed among these distances:
151 207 0.02
152 14 0.00
153 65 0.01
154 236 0.03
155 62 0.01
156 274 0.03
157 1002 0.11
158 2228 0.25
159 4195 0.48
160 424 0.05
161 81 0.01
162 9 0.00
163 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (159 bp):
TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGGTTTGGTTT
CGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAAATAAGACAA
ACATGGATTCTAGTAATAGTCTTCATTCA
Found at i:65988 original size:158 final size:157
Alignment explanation
Indices: 65781--68365 Score: 659
Period size: 159 Copynumber: 16.4 Consensus size: 157
65771 CCTCATTGTT
* * * *
65781 TTTTG-GATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTT
1 TTTTGTGATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * **
65845 CGTAAGAAAGGTTTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTTGTGCCTTAATTGTGGCAAA
66 CGCAAGAAAGCTTTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTTGTGCCTTAAATAAGGCAAA
65910 CATGGATTCTAGTAATGGTCTTCATTCA
131 CATGGATTCTAGTAAT-GTCTTCATTCA
* * * * * * **
65938 TTTTCTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * * * ** * * *
66003 TGCATGGAAATCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AA-TTTAATTCCTTAAATAAG
66 CGCA-AGAAAGCTTTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTT-GTGCCTTAAATAAG
* * * ** * * *
66064 GCAAGCATTGATTCTCA-CAACAATCTCCACTCT
126 GCAAACATGGATTCT-AGTAA-TGTCTTCATTCA
* * * * * * * * * * * *
66097 TTTTGAGACTGGGAACCAAAAACACATTCCTT-TCAAAAGGATACGTGACATTGACGCTTTAACG
1 TTTTGTGATTAGGCACCATAAACATATT-CTTCTCATAAGGATACATGATATTGATGGTTT--GG
* * * ** * **
66161 -TT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTGTAGAA-TCAAAGTTTGT-CTCTTAAATAA
63 TTTCGCAAG-AAAGCTTTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTTGTGC-CTTAAATAA
* * * * * *
66222 GACAAACATGAATAGTCACAGAAAT-CCTT-ATTCG
125 GGCAAACATGGAT--TC-TAGTAATGTCTTCATTCA
* * * * * *
66256 TTTT-TGGATAAGGCACCATAAACTTAGTCTTCTCATAAGCAGACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTT
* * * **
66320 TCGTAAGAAAGGC-TTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAATTGTGGCA
65 TCGCAAGAAA-GCTTTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTTGTGCCTTAAATAAGGCA
66384 AACATGGATTCTAGTAATTGTCTTCATTCA
129 AACATGGATTCTAGTAA-TGTCTTCATTCA
* * * * **
66414 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * * * ** * ** ** *
66479 TGCACGAAAATCTTTTCTT--TGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGC
66 CGCAAG-AAAGCTTTTCTTCCT-ACCAATTTT-GGTAAAGTGTAAGTTTGTGCCTTAAATAAGGC
* * * * *
66542 AAGCATTGATTCTCA-TAGCA-ATCTCCACTC-
128 AAACATGGATTCT-AGTA--ATGTCTTCATTCA
* * * * * * * *** * *** **
66572 TTTACGAGATTGGGAACCAAAAATACATTCCTT-TCA-ATAGGATATGCGACATTGACACTTTAA
1 TTT-TGTGATTAGGCACCATAAACATATT-CTTCTCATA-AGGATACATGATATTGATGGTTTGG
* * * ** * ** *
66635 TTTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGCTTGT-CTCTTAAATAA
63 TTTCGCAAG-AAAGCTTTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTTGTGC-CTTAAATAA
** * ** * * *
66698 AACAAACATGAATAGTC-ACACAAAG-CCTCATT-G
125 GGCAAACATGGAT--TCTA-GTAATGTCTTCATTCA
* * * *
66731 TTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTT
* * * * * * ** *
66796 TCGTAAGAAAG-GTTTCTT-CTAACCAATTTTGGTAAAGTTTATGTTCGTGCCTCAAATGTGCCA
65 TCGCAAGAAAGCTTTTCTTCCT-ACCAATTTTGGTAAAGTGTAAGTTTGTGCCTTAAATAAGGCA
66859 AACATGGATTCTAGTAATGATCTTCATTCA
129 AACATGGATTCTAGTAATG-TCTTCATTCA
* * * * * * * * * **
66889 TATTGTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTT
1 TTTTGTGATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * ** * ** ** *
66954 TGCAAGGAAATCTTTTCTTCGC--CCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGC
66 CGCAA-GAAAGCTTTTCTTC-CTACCAATTTT-GGTAAAGTGTAAGTTTGTGCCTTAAATAAGGC
* * ** * *
67017 AAGCATTGATTCTCA-TAACAATC-TCTACTCT
128 AAACATGGATTCT-AGTAA-TGTCTTC-ATTCA
* * * * * * ** * * * **
67048 TTTTGAGACTGGGAACCAAAAACACT-TTCTTTTCA-ATAGGATACGCGACATTGACGCTTTAAT
1 TTTTGTGATTAGGCACCATAAACA-TATTCTTCTCATA-AGGATACATGATATTGATGGTTTGGT
* * * ** * **
67111 GTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTGTAGAA-TCAAAGTTTGT-CTCTTAAATAA
64 -TTCGCAAG-AAAGCTTTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTTGTGC-CTTAAATAA
* * * * *
67173 GACAAACATGAATAGTCACAGAAAT-CCTT-ATTC-
125 GGCAAACATGGAT--TC-TAGTAATGTCTTCATTCA
* * * * * * *
67206 TTTTTTGGATAAGGCACCATAAACTTAGTCTTCTCATAAGCAGACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTT
* * * **
67271 TCGTAAGAAAGGC-TTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAATTGTGGCA
65 TCGCAAGAAA-GCTTTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTTGTGCCTTAAATAAGGCA
67335 AACATGGATTCTAGTAATTGTCTTCATTCA
129 AACATGGATTCTAGTAA-TGTCTTCATTCA
* * * * **
67365 TTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * * * ** * * *
67430 TGCACGAAAATCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AA-TTTAATTCCTTAAATAAG
66 CGCAAG-AAAGCTTTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTT-GTGCCTTAAATAAG
* * ** * * *
67491 GCAAGCATTGATTCTCA-TAACAATCTCCACTCT
126 GCAAACATGGATTCT-AGTAA-TGTCTTCATTCA
* * * * * * * * * * * **
67524 TTTTGAGACTGGGAACCAAAAACACATTCCTT-TCAAAAGGATACGTGACATTGACGCTTTAATG
1 TTTTGTGATTAGGCACCATAAACATATT-CTTCTCATAAGGATACATGATATTGATGGTTTGGT-
* * * ** ** * *
67588 TT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAA-TGAAAGTTTAT-CTCTTAAATAAG
64 TTCGCAAG-AAAGCTTTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTTGTGC-CTTAAATAAG
* * * ***
67650 ACAAACATGAATAGTCACAG-AAAACCTT-ATTC-
126 GCAAACATGGAT--TC-TAGTAATGTCTTCATTCA
* * * * * * ** *
67682 TTTTTTGGATAAGGCACCACAAACTTAGTCTTCTCATAAGCATACGCGATATTGATTGTTTGGTT
1 TTTTGT-GATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTT
* * * * * * * **
67747 TCGTAAGAAAGGTTTTCTTCCCACCAATTTTGGCAAAGTGCAA-TATCGTGCCTTAATTGTGGCA
65 TCGCAAGAAAGCTTTTCTTCCTACCAATTTTGGTAAAGTGTAAGT-TTGTGCCTTAAATAAGGCA
*
67811 AACATGGATTCTCGTAATGGTCTTCATTCA
129 AACATGGATTCTAGTAAT-GTCTTCATTCA
** * * * * **
67841 TTTTGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * * ** * * * *
67906 TGCATAGAAATCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AA-TTTAATTCCTTAAACAAG
66 CGCA-AGAAAGCTTTTCTTCCT-ACCAATTTT-GGTAAAGT-GTAAGTTT-GTGCCTTAAATAAG
* * * * * *
67967 GCAAGCATTGATTCTCGTAACAGTCTCCACTC-
126 GCAAACATGGATTCTAGTAA-TGTCTTCATTCA
** * * * * * * *** * * *
67999 TTTTCAAGATTGGGAACAAAAAACACATTCCTT-TCATTAGGATACGCAACATTGATGCTTTGAT
1 TTTT-GTGATTAGGCACCATAAACATATT-CTTCTCATAAGGATACATGATATTGATGGTTTGGT
* * * * * **
68063 GTCGCAAGAAAAGCATTTCTTCCAACCATTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAG
64 TTCGCAAG-AAAGCTTTTCTTCCTACCAATTTTGGTA-AAGTGTAAGTTTGTGC-CTTAAATAAG
* * ** ** * *
68126 ACAAACATGAATAGTC-ACAAAAATCCTCATTCC
126 GCAAACATGGAT--TCTAGTAATGTCTTCATTCA
* * * *
68159 TTTT-TGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTT
** * * * * * * * ** *
68223 TCATAAGTATGC-TTTCAT-CTACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCAA
65 TCGCAAGAAAGCTTTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTTGTGCCTTAAATAAGGCAA
* *
68286 ACATGCATTCTAGTAATG----GATTCA
130 ACATGGATTCTAGTAATGTCTTCATTCA
** ** * * * * *
68310 CGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATTGATG
1 TTTTGTGATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATG
68366 ATTTTCTTTT
Statistics
Matches: 1704, Mismatches: 576, Indels: 302
0.66 0.22 0.12
Matches are distributed among these distances:
151 47 0.03
152 1 0.00
154 2 0.00
155 19 0.01
156 51 0.03
157 125 0.07
158 451 0.26
159 895 0.53
160 90 0.05
161 19 0.01
162 4 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (157 bp):
TTTTGTGATTAGGCACCATAAACATATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
CGCAAGAAAGCTTTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTTGTGCCTTAAATAAGGCAAA
CATGGATTCTAGTAATGTCTTCATTCA
Found at i:120361 original size:158 final size:159
Alignment explanation
Indices: 119679--120842 Score: 466
Period size: 159 Copynumber: 7.4 Consensus size: 159
119669 CCTCATTGTT
* * *
119679 TTTTG-GATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTT
1 TTTTGTGATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * * * * ** *
119743 CGTAAGAAAGG--TTTCTT-CTAACCAATTTTGGTAAAGTTTATGTTCGCGCCTCAAATGTGCCA
66 CGCAAGAAAGGCATTTCTTCCT-ACCAATTTTGGTAAAATGTAAGTTCGTGCCTTAAATAAGACA
*
119805 AACATGGATTCTAGTAATGATCTTCATTCA
130 AACATGGATTCTAGTAATAATCTTCATTCA
* * * * * * * * * **
119835 TATTGTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTT
1 TTTTGTGATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * * * ** ** * * *
119900 TGCATGGAAA-TCTTTTCTT-C-ACCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGG
66 CGCA-AGAAAGGCATTTCTTCCTA-CCAATTTT-GGTAAAATGTAAGTTCGTGCCTTAAATAAGA
* * * * * *
119962 CAAGCATTGATTCTCA-TAACAATCTCCACTCT
128 CAAACATGGATTCT-AGTAATAATCTTCATTCA
* * * * * * * ** * * * **
119994 TTTTGAGACTGGGAACCAAAAACACT-TTCTTTTCA-ATAGGATACGCGACATTGACGCTTTAAT
1 TTTTGTGATTAGGCACCATAAAC-GTATTCTTCTCATA-AGGATACATGATATTGATGGTTTGGT
* * * ** * * ** *
120057 GTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTGTAGAATCAAAGTTTGT-CTCTTAAATAAG
64 -TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAAGTTCGTGC-CTTAAATAAG
* *
120120 ACAAACAT-GA--ATAGTCACAGAAATCCTT-ATTC-
127 ACAAACATGGATTCTAGT-A-A-TAAT-CTTCATTCA
* * * * * * *
120152 TTTTTTGGATAAGGCACCATAAACTTAGTCTTCTCATAAGCAGACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTT
* * * ** *
120217 TCGTAAGAAAGGC-TTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAATTGTGGCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAAGTTCGTGCCTTAAATAAGACA
**
120281 AACATGGATTCTAGTAATGGTCTTCATTCA
130 AACATGGATTCTAGTAATAATCTTCATTCA
* * * * **
120311 TTTTGTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * * * * ** * ** *
120376 TGCATGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AATTTAATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAAT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * *
120437 GCAAGCATTGATTCTCA-TAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAATCTTCATTCA
* * * * * ** * * * * * **
120470 TTTTGAGACTGGGAACCAAAAACACATTCCTT-TCAAAAGGATACGTGACATTGACGCTTTAATG
1 TTTTGTGATTAGGCACCATAAACGTATT-CTTCTCATAAGGATACATGATATTGATGGTTTGGT-
* * * * ** * *
120534 TT-GCAAGAAAAGCATTTCTTTCAACCATTTTTTATAAAATGAAAGTTTGT-CTCTTAAATAAGA
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAAGTTCGTGC-CTTAAATAAGA
* * *
120597 CAAACATGAATAGTCACAG-AA-AACCTT-ATTC-
128 CAAACATGGAT--TC-TAGTAATAATCTTCATTCA
* * * * * * ** *
120628 TTTTTTGGATAAGGCACCACAAACTTAGTCTTCTCATAAGCATACGCGATATTGATTGTTTGGTT
1 TTTTGT-GATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTT
* * * * * **
120693 TCGTAAGAAAGGC-TTTCTTCCTACCAATTTCGGCAAAGTGTAA-TATCGTGCCTTAATTGTGAC
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAAGT-TCGTGCCTTAAATAAGAC
**
120756 AAACATGGATTCTAGTAATGGTCTTCATTCA
129 AAACATGGATTCTAGTAATAATCTTCATTCA
** * *
120787 TTTTGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATG
1 TTTTGTGATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATG
120843 ATTTTCTTTT
Statistics
Matches: 715, Mismatches: 238, Indels: 108
0.67 0.22 0.10
Matches are distributed among these distances:
155 3 0.00
156 10 0.01
157 60 0.08
158 227 0.32
159 373 0.52
160 32 0.04
161 10 0.01
ACGTcount: A:0.30, C:0.17, G:0.16, T:0.37
Consensus pattern (159 bp):
TTTTGTGATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
CGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAAGTTCGTGCCTTAAATAAGACAA
ACATGGATTCTAGTAATAATCTTCATTCA
Found at i:126481 original size:158 final size:159
Alignment explanation
Indices: 125799--127438 Score: 465
Period size: 159 Copynumber: 10.4 Consensus size: 159
125789 CCTCATTGTT
* * *
125799 TTTTG-GATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGTTTGGTTT
1 TTTTGTGATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * * * * ** *
125863 CGTAAGAAAGG--TTTCTT-CTAACCAATTTTGGTAAAGTTTATGTTCGCGCCTCAAATGTGCCA
66 CGCAAGAAAGGCATTTCTTCCT-ACCAATTTTGGTAAAATGTAAGTTCGTGCCTTAAATAAGACA
*
125925 AACATGGATTCTAGTAATGATCTTCATTCA
130 AACATGGATTCTAGTAATAATCTTCATTCA
* * * * * * * * * **
125955 TATTGTGATTAGGCAGCATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTT
1 TTTTGTGATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * * * ** ** * * *
126020 TGCATGGAAA-TCTTTTCTT-C-ACCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGG
66 CGCA-AGAAAGGCATTTCTTCCTA-CCAATTTT-GGTAAAATGTAAGTTCGTGCCTTAAATAAGA
* * * * * *
126082 CAAGCATTGATTCTCA-TAACAATCTCCACTCT
128 CAAACATGGATTCT-AGTAATAATCTTCATTCA
* * * * * * * ** * * * **
126114 TTTTGAGACTGGGAACCAAAAACACT-TTCTTTTCA-ATAGGATACGCGACATTGACGCTTTAAT
1 TTTTGTGATTAGGCACCATAAAC-GTATTCTTCTCATA-AGGATACATGATATTGATGGTTTGGT
* * * ** * * ** *
126177 GTT-GCAAGAAAAGCATTTCTTTCAACCGTTTTTTGTAGAATCAAAGTTTGT-CTCTTAAATAAG
64 -TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAAGTTCGTGC-CTTAAATAAG
* *
126240 ACAAACAT-GA--ATAGTCACAGAAATCCTT-ATTC-
127 ACAAACATGGATTCTAGT-A-A-TAAT-CTTCATTCA
* * * * * * *
126272 TTTTTTGGATAAGGCACCATAAACTTAGTCTTCTCATAAGCAGACACGATATTGATGGTTTGGTT
1 TTTTGT-GATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTT
* * * ** *
126337 TCGTAAGAAAGGC-TTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCGTGCCTTAATTGTGGCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAAGTTCGTGCCTTAAATAAGACA
**
126401 AACATGGATTCTAGTAATGGTCTTCATTCA
130 AACATGGATTCTAGTAATAATCTTCATTCA
* * * * **
126431 TTTTGTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * * * * ** * ** *
126496 TGCATGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AATTTAATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAAT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * *
126557 GCAAGCATTGATTCTCA-TAACAATCTCCACTCT
127 ACAAACATGGATTCT-AGTAATAATCTTCATTCA
* * * * * ** * * * * * **
126590 TTTTGAGACTGGGAACCAAAAACACATTCCTT-TCAAAAGGATACGTGACATTGACGCTTTAATG
1 TTTTGTGATTAGGCACCATAAACGTATT-CTTCTCATAAGGATACATGATATTGATGGTTTGGT-
* * * * ** * *
126654 TT-GCAAGAAAAGCATTTCTTTCAACCATTTTTTATAAAATGAAAGTTTGT-CTCTTAAATAAGA
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAAGTTCGTGC-CTTAAATAAGA
* *
126717 CAAACATGAATAGTC-ACCG-AA-AACCTT-ATTC-
128 CAAACATGGAT--TCTA--GTAATAATCTTCATTCA
* * * * * * ** *
126748 TTTTTTGGATAAGGCACCACAAACTTAGTCTTCTCATAAGCATACGCGATATTGATTGTTTGGTT
1 TTTTGT-GATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTT
* * * * * **
126813 TCGTAAGAAAGGC-TTTCTTCCTACCAATTTCGGCAAAGTGTAA-TATCGTGCCTTAATTGTGAC
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAAGT-TCGTGCCTTAAATAAGAC
**
126876 AAACATGGATTCTAGTAATGGTCTTCATTCA
129 AAACATGGATTCTAGTAATAATCTTCATTCA
** * * * **
126907 TTTTGTGATTAGGCATTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTT
1 TTTTGTGATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
* * * * * * ** * ** *
126972 TGCATGGAAA-TCTTTTCTT--TGCCCTATTTTCCTTAAAATCG-AATTTAATTCCTTAAATAAG
66 CGCA-AGAAAGGCATTTCTTCCT-ACCAATTTT-GGTAAAAT-GTAAGTTCGTGCCTTAAATAAG
* * * * * * * *
127033 GCAAGCATTGATTCTCGTAACAGTCTCCACTC-
127 ACAAACATGGATTCTAGTAATAATCTTCATTCA
** * * * * ** * *** * * *
127065 TTTTCAAGATTGGGAACAAAAAACACATTCCTT-TCATTAGGATACGCAACATTGATGCTTTGAT
1 TTTT-GTGATTAGGCACCATAAACGTATT-CTTCTCATAAGGATACATGATATTGATGGTTTGGT
* * * ** * * * *
127129 GTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAAT-TAATGTTTGT-CTCTTAAATATG
64 TTCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAA-GTTCGTGC-CTTAAATAAG
* * * *
127192 ACAAAGAT-GA--GTAGTCACACTAATCCTCATT-G
127 ACAAACATGGATTCTAGT-A-A-TAATCTTCATTCA
* * *** ** *
127224 TTTTTTAGATTAGGCACCATAAACTTGGACTTCTCGCAAGGATACATGATATTGACGGTTTGGTT
1 TTTTGT-GATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTT
* * * * * * * ** *
127289 TCGTAAGAAAGGC-TTTCTTCCCACTAATTTTGGTAAAGTGTAAGTTCATGCCTCAATTGTGCCA
65 TCGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAAGTTCGTGCCTTAAATAAGACA
* * * *
127353 AACATGGATTGTAGTAATGATCTTCTTTTA
130 AACATGGATTCTAGTAATAATCTTCATTCA
** * * ** * * * *
127383 CGTTGTGATTAAGCACTATAAACAAAGTCTTCTTATTAGGATAAATGATATTGATG
1 TTTTGTGATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATG
127439 ATTTTCTTTT
Statistics
Matches: 1037, Mismatches: 364, Indels: 164
0.66 0.23 0.10
Matches are distributed among these distances:
155 2 0.00
156 13 0.01
157 63 0.06
158 341 0.33
159 560 0.54
160 44 0.04
161 14 0.01
ACGTcount: A:0.30, C:0.17, G:0.16, T:0.37
Consensus pattern (159 bp):
TTTTGTGATTAGGCACCATAAACGTATTCTTCTCATAAGGATACATGATATTGATGGTTTGGTTT
CGCAAGAAAGGCATTTCTTCCTACCAATTTTGGTAAAATGTAAGTTCGTGCCTTAAATAAGACAA
ACATGGATTCTAGTAATAATCTTCATTCA
Found at i:129676 original size:32 final size:32
Alignment explanation
Indices: 129635--129712 Score: 129
Period size: 32 Copynumber: 2.4 Consensus size: 32
129625 ACAAACAGTA
*
129635 AATGTATCGATGCATAAGTGTTGTATCAATAC
1 AATGTATCGATACATAAGTGTTGTATCAATAC
*
129667 AATGTATCGATACATAAGTGTTGTATCGATAC
1 AATGTATCGATACATAAGTGTTGTATCAATAC
*
129699 AATGTATCGCTACA
1 AATGTATCGATACA
129713 AAGCTACGGC
Statistics
Matches: 43, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
32 43 1.00
ACGTcount: A:0.35, C:0.14, G:0.18, T:0.33
Consensus pattern (32 bp):
AATGTATCGATACATAAGTGTTGTATCAATAC
Found at i:129697 original size:19 final size:19
Alignment explanation
Indices: 129637--129699 Score: 66
Period size: 19 Copynumber: 3.6 Consensus size: 19
129627 AAACAGTAAA
*
129637 TGTATCGATGCATAAGTGT
1 TGTATCGATACATAAGTGT
*
129656 TGTATCAATAC--AA----
1 TGTATCGATACATAAGTGT
129669 TGTATCGATACATAAGTGT
1 TGTATCGATACATAAGTGT
129688 TGTATCGATACA
1 TGTATCGATACA
129700 ATGTATCGCT
Statistics
Matches: 35, Mismatches: 3, Indels: 12
0.70 0.06 0.24
Matches are distributed among these distances:
13 10 0.29
15 2 0.06
17 2 0.06
19 21 0.60
ACGTcount: A:0.33, C:0.13, G:0.19, T:0.35
Consensus pattern (19 bp):
TGTATCGATACATAAGTGT
Found at i:134414 original size:475 final size:476
Alignment explanation
Indices: 132947--136010 Score: 4573
Period size: 475 Copynumber: 6.4 Consensus size: 476
132937 GCGACATCTT
* * * * * * *
132947 GTTCATTCCTGAAAAAAGTCATGCAATGATTCTAATAACAATCTCCACTCTTTTCGAGATTGGTA
1 GTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGA
* * * *
133012 ACCAAAACCACAGTCCTTTCCATAGGATACGCGACATTGACGCTTTAATATCGCAAGAAAAGCAT
66 ACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCAT
133077 TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAC
131 TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAC
* *
133142 AGAAATCCTCATTCTTTCTCAAATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATA
196 AGAAATCCTCATTCTTTTTCAGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATA
* *
133207 TTGATGGTTTGGTTTCATAAGAAAGGCTTTCTTCTCC-CCAATTTTGGTAAAGTCTAAGTTCATG
261 TTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTC-CCACCAATTTTGGTAAAGTCTATGTTCATG
* * ** ** *
133271 CCTCAACTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTTGTGACAAGGCACTATAA
325 CCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACATTGTGATTAGGCAGTATAA
* * * * * ** *
133336 ACGTATTCTTCTCATTAGGATAAATGATATTGATAATTTTCTTTCACAAGGAAATCTTTTCTTTG
390 ACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTG
133401 CCC-AGTTTTCCTTAAAATCAAA
455 CCCTA-TTTTCCTTAAAATCAAA
* * * * ** * *
133423 TTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAATAGCCTCCATTCTTTTCAAGATTGGGA
1 GTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGA
*
133488 ACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACTCTTTAATGTCGCAAGAAAAGCAT
66 ACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCAT
* * * * *
133553 TTCTTTTAGCCGTTTCTGATAGAATCAAATTTTGTCTCTTAAATAAGACAAAGATGAATAGTCAC
131 TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAC
* * * *
133618 AGAAATCCTTATTCTTTTTCAGATTAGGCACCATAAACTTAGTATTCTAATAGGCATACACGATA
196 AGAAATCCTCATTCTTTTTCAGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATA
* *
133683 TTGATGGTTTGGTTTTG-AACGAAAGGCTTTCTTCCCACCAATTTTGGCAAAGTCTATGTTCATG
261 TTGATGGTTTGGTTTCGTAA-GAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCATG
* * * *
133747 CCTCAAATGTAACAAACATGGATTGTGGTAATGATCTTCTTTCACATTGTGATTAGGCAGTATAA
325 CCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACATTGTGATTAGGCAGTATAA
* *
133812 ACTTATTCTCCTCCTTAGCATAAATGACATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTG
390 ACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTG
*
133877 CTCTATTTTCCTTAAAATCAAA
455 CCCTATTTTCCTTAAAATCAAA
*
133899 GTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTACGAGATTGGGA
1 GTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGA
* *
133964 ACCAAAAATACATTCCTTTCAATAGGACACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCAT
66 ACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCAT
* * *
134029 TTCTTTCAACTGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAAACAAACATGAATAATCAC
131 TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAC
* ** *
134094 ACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACAATA
196 AGAAATCCTCATTCTTTTTCAGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATA
* * *
134159 TTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAACTTTGGTAAAGTCTATGTCCGTGC
261 TTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCATGC
* *
134223 CTCAAATGTGCCAAACATGGATTCTAGTAAAGATCTTCATTCACATTGTGATTAGGCAGTATAAA
326 CTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACATTGTGATTAGGCAGTATAAA
* *
134288 CTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCACGAAAATCTTTTCTTTGC
391 CTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGC
* *
134353 CCTATTTTTCTTAAAATTAAA
456 CCTATTTTCCTTAAAATCAAA
* * * * * *
134374 GTTCATTCCTGAAAAAAGTCATA-CAATGATTCTAATAACAATCTCCA-TCTTTTCAAGATTGGG
1 GTTCATTCCTTAAATAAGGCA-AGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGG
* * *
134437 AACCAAAAACATAGTCCTTTCCATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCA
65 AACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCA
* *
134502 TTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGACTAGTCA
130 TTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCA
* *
134567 CAGAAATCCTCATTCTTTCTCGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGAT
195 CAGAAATCCTCATTCTTTTTCAGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGAT
* *
134632 ATTGATGGTTTGGTTTCATAAGAAAGGCTTTCTTCTCC-CCAATTTTGGTAAAGTCTAAGTTCAT
260 ATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTC-CCACCAATTTTGGTAAAGTCTATGTTCAT
* * ** ** * *
134696 GCCTCAACTGTGACAAACATGGATTCTAGTAATGGTCTTCATTCATTTTGTGACAAGGTACTATA
324 GCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACATTGTGATTAGGCAGTATA
* * * * ** * *
134761 AACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTCACAAGGAAATGTTTTCTTT
389 AACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTT
134826 G-CCTAGTTTTCCTTAAAATCAAA
454 GCCCTA-TTTTCCTTAAAATCAAA
* * * * ** *
134849 TTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAATAGCCTCCATTCTTTTCGAGATTGGGA
1 GTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGA
*
134914 ACCAAAAACACATTCCTTTCAATAGGACACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCAT
66 ACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCAT
* * * *
134979 TTCTTT-TAGCGTTTTTGATAGAATCAAATTTTGTCTCTTAAATAAGACAAAGATGAATAGTCAC
131 TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAC
* * *
135043 AGAAATCCTTATTCTTTTTCAGATTAGGCACCATAAACTTAGTATTCTCATAGGCATACACGATA
196 AGAAATCCTCATTCTTTTTCAGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATA
* *
135108 TTGATGGTTTGGTTTCGAAAGAAAGGCTTTCTTCCCACCAATTTTGGCAAAGTCTATGTTCATGC
261 TTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCATGC
* * *
135173 CTCAAATGTGACAAACATGGATTGTGGTAATGATCTTCTTTCACATTGTGATTAGGCAGTATAAA
326 CTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACATTGTGATTAGGCAGTATAAA
* *
135238 CTTATTCTCCTCCTTAGGATAAATGACATGGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGC
391 CTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGC
135303 CCTATTTTCCTTAAAATCAAA
456 CCTATTTTCCTTAAAATCAAA
*
135324 GTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTACGAGATTGGGA
1 GTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGA
* *
135389 ACCAAAAATACATTCCTTTCAATAGGATACGCGACATTAACGCTTTAATGTCGCAAGAAAAGCAT
66 ACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCAT
** * * *
135454 TTCTTTCAAATGTTTTTGATAGAATCAAGGTTTGTCACTTAAATAAAACAAACATGAATAGTCAC
131 TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAC
* ** *
135519 ACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACAATA
196 AGAAATCCTCATTCTTTTTCAGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATA
*
135584 TTGATGGTTTGGTTTCGTAAGAAAGG-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGC
261 TTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCATGC
*
135648 CTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACATTGTGATTAGGCAGTATAAA
326 CTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACATTGTGATTAGGCAGTATAAA
*
135713 CTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTAC
391 CTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGC
*
135778 CCTATTTTTCTTAAAATCAAA
456 CCTATTTTCCTTAAAATCAAA
* * * * *
135799 GTTCATTCCTGAAAAAAGTCATGCAATGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGA
1 GTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGA
* * * * **
135864 ACCAAAAACATAGTCCTTTCCATAGGATACGCGACATTGACACTTTAATGTCTTAAGAAAAGCAT
66 ACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCAT
* * *
135929 TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGACTAGTCAT
131 TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAC
135994 AGAAATCCTCATTCTTT
196 AGAAATCCTCATTCTTT
136011 CTCGGATTGA
Statistics
Matches: 2313, Mismatches: 262, Indels: 27
0.89 0.10 0.01
Matches are distributed among these distances:
474 228 0.10
475 1194 0.52
476 888 0.38
477 3 0.00
ACGTcount: A:0.32, C:0.19, G:0.14, T:0.35
Consensus pattern (476 bp):
GTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGA
ACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAGCAT
TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAC
AGAAATCCTCATTCTTTTTCAGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATA
TTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCATGC
CTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACATTGTGATTAGGCAGTATAAA
CTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGC
CCTATTTTCCTTAAAATCAAA
Found at i:136077 original size:165 final size:165
Alignment explanation
Indices: 135885--136183 Score: 483
Period size: 165 Copynumber: 1.8 Consensus size: 165
135875 AGTCCTTTCC
* **
135885 ATAGGATACGCGACATTGACACTTTAATGTCTTAAGAAAAGCATTTCTTTCAACCGTTTTTGATA
1 ATAGGATACACGACATTGACACTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATA
* * *
135950 GAATCAAAGTTTATCTCTTAAATAAGACAAACATGACTAGTCATAGAAATCCTCATTCTT-TCTC
66 GAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTCTCT-
136014 GGATTGAGATTGAGAACCAAAACCACATTTCTTTAA
130 GGATTGAGATTGAGAACCAAAACCACATTTCTTTAA
* *
136050 ATAGGATACACGACATTGACGCTTTAATGTCGCAAGAAAAGTATTTCTTTCAACCGTTTTTGATA
1 ATAGGATACACGACATTGACACTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATA
* * *
136115 GAATCAAAGTTTGTCTCTTAAATAAGACGAACATGAATAGTCACACTAATCCTCATTCTTCTCTG
66 GAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTCTCTG
136180 GATT
131 GATT
136184 AAGCACCATA
Statistics
Matches: 122, Mismatches: 11, Indels: 2
0.90 0.08 0.01
Matches are distributed among these distances:
165 119 0.98
166 3 0.02
ACGTcount: A:0.34, C:0.18, G:0.14, T:0.33
Consensus pattern (165 bp):
ATAGGATACACGACATTGACACTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATA
GAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTCTCTG
GATTGAGATTGAGAACCAAAACCACATTTCTTTAA
Found at i:136758 original size:16 final size:16
Alignment explanation
Indices: 136737--136772 Score: 72
Period size: 16 Copynumber: 2.2 Consensus size: 16
136727 TTTCTTCTCC
136737 CTAATTTTGGTAAAGT
1 CTAATTTTGGTAAAGT
136753 CTAATTTTGGTAAAGT
1 CTAATTTTGGTAAAGT
136769 CTAA
1 CTAA
136773 GGCTTTCTTC
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 20 1.00
ACGTcount: A:0.33, C:0.08, G:0.17, T:0.42
Consensus pattern (16 bp):
CTAATTTTGGTAAAGT
Found at i:137767 original size:476 final size:476
Alignment explanation
Indices: 136814--139479 Score: 3602
Period size: 476 Copynumber: 5.6 Consensus size: 476
136804 TCCTCCTTAA
* *
136814 GATAATTGATA-TGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGTCCTATTTTCCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
* * * *
136878 CAAAGTTCATTCCTTAAATAAGACAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATT
66 CAAATTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTCGAGATT
* * * * *
136943 GGGAACCAAAAACGCATTCCTTTCA-ATAGGATACGCAACATTGGCACTTTAATGTCGTAAGAAA
131 GGGAACCAAAAACACATTCCTTTCATA-AGGATACGCGACATTGACACTTTAATGCCGCAAGAAA
* * * *
137007 AGCATTTCTTTCAACCGTTTTTGATAGAATTAAATTTTGTCTCTTAAAAAAGACAAACATGAATA
195 AGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
* *
137072 GTCACACAAATCCTTATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACA
260 GTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACA
* *
137137 CGGTATTGATGGTTTGCTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTTTAAGTT
325 CGGTATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTT
*
137202 CGTGCCTCAATTGTGAG-AAACATGGATTCTAGTAATCG-TCTTCATTCATTTTGTGATTAGGCA
390 CGTGCCTCAATTGTG-GCAAACATGGATTCTAGTAAT-GATCTTCATTCACTTTGTGATTAGGCA
* * *
137265 GTACAAAC-TTGTTCTCCTCT-TTAG
453 CTATAAACATAG-TCTCCT-TATTAG
137289 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
* * * *
137354 CAAACTTAATTCATTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTTGAGATT
66 CAAATTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTCGAGATT
* * ** * **
137419 GAGAACCAAAAACACATTTCTTTCATAAGGATACGCGACATTGACGTTTTGATGCCAAAAGAAAA
131 GGGAACCAAAAACACATTCCTTTCATAAGGATACGCGACATTGACACTTTAATGCCGCAAGAAAA
* **
137484 GCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAACCATGAGGAG
196 GCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG
* *
137549 TCACACTAATCCTCACTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCACAAGGATACAC
261 TCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACAC
* * * * *
137614 GGTATTGATCGTTTGGTTTCATAAGAAAGGCTTTCTTCCAACCAATTTTAGTAAAGTCTAAGCTC
326 GGTATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTC
* * * * * *
137679 GTGCCTCAATTGTGGCAAACATGGATTGTAGTAATGATCTTGATTTACTTTATGACTAGGAACTA
391 GTGCCTCAATTGTGGCAAACATGGATTCTAGTAATGATCTTCATTCACTTTGTGATTAGGCACTA
*
137744 TAAACAAAGTCTCCTTATTAG
456 TAAACATAGTCTCCTTATTAG
* * * * *
137765 GATAAATGATGTTAATGATTTTCTTCCT-CTTGGAAATTTTTTCTTTGCCCTATTTTCCTTAAAA
1 GATAAATGATATTGATGATTTTCTT-TTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAA
* * * * *
137829 TCAAATTTCATTCCTTTAATATGGCAAGCATTGATTCTCGTAATAGCCTCCACTCTTTTTGAGAT
65 TCAAATTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTCGAGAT
* * *
137894 TGGGAACCAAAAACACATTCCTTTCAATAA-G-TATGTGACATTGACACTTTAATGTCGCAAGAA
130 TGGGAACCAAAAACACATTCCTTTC-ATAAGGATACGCGACATTGACACTTTAATGCCGCAAGAA
* *
137957 AAGTATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAGT
194 AAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
*
138022 AGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTA-TCTTCTTATAAGCG-TA
259 AGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-GATA
* * *
138085 CACGATATTGATGGTTTGCTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTATAAG
323 CACGGTATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAG
* * *
138150 TTCGTGCCTTAATTGTGAG-AAACATGGATTCTAGTAATGGTCTTCATTCATTTTGTGATTAGGC
388 TTCGTGCCTCAATTGTG-GCAAACATGGATTCTAGTAATGATCTTCATTCACTTTGTGATTAGGC
* * * * *
138214 ACTATAAACGTATTCTTCTCATAAG
452 ACTATAAACATAGTCTCCTTATTAG
* *
138239 GACAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTTTTTGCCCTATTTTCCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
* * * * *
138304 CAAATTTAATTCCTTAAATAAGGCAAGGATTGATTCTCGTAACATTCTCTACTCTTTTAGAGATT
66 CAAATTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTCGAGATT
* * * *
138369 GGGAACCAAAAACACATTCTTTTCATCAGGATACACGACATTGACACTTTGATGCCGCAAGAAAA
131 GGGAACCAAAAACACATTCCTTTCATAAGGATACGCGACATTGACACTTTAATGCCGCAAGAAAA
* * *
138434 GCATTTCTTCGAACCTTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAGTAG
196 GCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG
* * *
138499 TCATACTAATCTTCACTCTTTTTTGGATTAGG---C----A-TTAGTCTTCTCATAAGGATACAC
261 TCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACAC
* * *
138556 GGTATTGATCGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTGAGCTC
326 GGTATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTC
* * * *
138621 GTGCCTCAATTGTGGCAAACATAGATTGTAGTAATTATCTTCATTTACTTTGTGATTAGGCACTA
391 GTGCCTCAATTGTGGCAAACATGGATTCTAGTAATGATCTTCATTCACTTTGTGATTAGGCACTA
* *
138686 TAAACAAAGTCTCCATATTAG
456 TAAACATAGTCTCCTTATTAG
138707 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
* * * * * *
138772 CAAA-ATCA-TCTCTTAAATAAGGCAAACATTGATTCTCGTTACTGTCTCCACTCTTTTCAACAT
66 CAAATTTCATTC-CTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTCGAGAT
* *** ** ** * *
138835 TGGGAACCAAAAACACATTCCTTTCATTAGGATAAATGACATTGAGGCTTTGGTGCCGTAAAAAA
130 TGGGAACCAAAAACACATTCCTTTCATAAGGATACGCGACATTGACACTTTAATGCCGCAAGAAA
* * *
138900 AGCATTTCTTTCC-ACCGTTTTTGACAGAATCAAAGTTTGTCTCTAAAATAAGACAAACACGAAT
195 AGCATTTC-TTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
* * * * *
138964 TGTCATACTAATCCTCATTCTTTTCTGGATTAGCCACCATAAATTTAGTCTTCTCATAAGGATAC
259 AGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGATAC
* * * *
139029 ACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTCCTTCCGACCAATTTTGGTAAAGTCTATGT
324 ACGGTATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGT
* * * * * * *
139093 TCTTGCCTCAAATGTGCCAAACATTGATTCTAGTAATGATCTTCATTCACGTTGTAATTAGGCAG
389 TCGTGCCTCAATTGTGGCAAACATGGATTCTAGTAATGATCTTCATTCACTTTGTGATTAGGCAC
* * ** *
139158 TATAAACTTATTCTCCTCCTTAA
454 TATAAACATAGTCTCCTTATTAG
* * *
139181 GATAATTGATATGGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
* * *
139246 CAAATTTCATTCCTTAAATAAGGCAAGGATTGATTCTCATAACAATCTCCACTCTTTTCGAGATT
66 CAAATTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTCGAGATT
* * *
139311 GGGAACCAAAAACGCATTCCTTTCA-ATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAA
131 GGGAACCAAAAACACATTCCTTTCATA-AGGATACGCGACATTGACACTTTAATGCCGCAAGAAA
* * *
139375 ATG-ATTTCTTTCAACCATTTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
195 A-GCATTTCTTCCAACC-GTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
* *
139439 TAGTCACACAAATCCTCATTCTTTTTTGGAGTAGGCACCAT
258 TAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCAT
139480 GATGACAACC
Statistics
Matches: 1917, Mismatches: 242, Indels: 63
0.86 0.11 0.03
Matches are distributed among these distances:
466 2 0.00
467 189 0.10
468 216 0.11
470 1 0.00
472 1 0.00
473 4 0.00
474 447 0.23
475 425 0.22
476 625 0.33
477 7 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.36
Consensus pattern (476 bp):
GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
CAAATTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTAACAGTCTCCACTCTTTTCGAGATT
GGGAACCAAAAACACATTCCTTTCATAAGGATACGCGACATTGACACTTTAATGCCGCAAGAAAA
GCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG
TCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACAC
GGTATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTC
GTGCCTCAATTGTGGCAAACATGGATTCTAGTAATGATCTTCATTCACTTTGTGATTAGGCACTA
TAAACATAGTCTCCTTATTAG
Found at i:139124 original size:942 final size:945
Alignment explanation
Indices: 136814--139474 Score: 3717
Period size: 942 Copynumber: 2.8 Consensus size: 945
136804 TCCTCCTTAA
* *
136814 GATAATTGATA-TGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGTCCTATTTTCCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
* * * **
136878 CAAAGTTCATTCCTTAAATAAGACAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATT
66 CAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTTACTGTCTCCACTCTTTTCGAGATT
* * * * *
136943 GGGAACCAAAAACGCATTCCTTTCAATAGGATACGCAACATTGGCACTTTAATGTCGTAAGAAAA
131 GGGAACCAAAAACACATTCCTTTCAATAGGATACACGACATTGACACTTTAATGTCGCAAGAAAA
* *
137008 GCATTTCTTTCAACCGTTTTTGATAGAATTAAATTTTGTCTCTTAAAA-AAGACAAACATGAATA
196 GCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC-TAAAATAAGACAAACATGAATA
* * *
137072 GTCACACAAATCCTTATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACA
260 GTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACA
* * *
137137 CGGTATTGATGGTTTGCTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTTTAAGTT
325 CGATATTGATGGTTTGCTTTCGTAAGAAAGGCTTCCTTCCCACCAATTTTGGTAAAGTCTAAGTT
* * *
137202 CGTGCCTCAATTGTGAGAAACATGGATTCTAGTAATCG-TCTTCATTCATTTTGTGATTAGGCAG
390 CGTGCCTCAAATGTGACAAACATGGATTCTAGTAAT-GATCTTCATTCACTTTGTGATTAGGCAG
* * * *
137266 TACAAACTTGTTCTCCT-CTTTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTT
454 TATAAACTTATTCTCCTCCTTAAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTT
* * *
137330 TCTTTGCCCTATTTTCCTTAAAATCAAACTTAATTCATTAAATAAGGCAAGCATTGATTCTCGTA
519 TCTTTGCCCTATTTTCCTTAAAATCAAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATA
* * * *
137395 ACAGTCTCCACTCTTTTTGAGATTGAGAACCAAAAACACATTTCTTTC-ATAAGGATACGCGACA
584 ACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAAT-AGGATACGCGACA
* * ** *
137459 TTGACGTTTTGATGCCAAAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTC
648 TTGACGCTTTAATGCCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTC
* ** *
137524 TCTTAAATAAGACAACCATGAGGAGTCACACTAATCCTCACTCTTTTTTGGATTAGGCACCATAA
713 TCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCACTCTTTTTTGGATTAGG--CC---A
* *
137589 ACTTAGTCTTCTCACAAGGATACACGGTATTGATCGTTTGGTTTCATAAGAAAGGCTTTCTTCCA
773 ACTTAGTCTTCTCATAAGGATACACGGTATTGATCGTTTGGTTTCATAAGAAAGGCTTTCTTCCC
* * *
137654 ACCAATTTTAGTAAAGTCTAAGCTCGTGCCTCAATTGTGGCAAACATGGATTGTAGTAATGATCT
838 ACCAATTTTGGTAAAGTCT-AGCTCGTGCCTCAATTGTGGCAAACATAGATTGTAGTAATTATCT
* *
137719 TGATTTACTTTATGACTAGGAACTATAAACAAAGTCTCCTTATTAG
902 TCATTTACTTTATGATTAGG-ACTATAAACAAAGTCTCC-TATTAG
* * * * *
137765 GATAAATGATGTTAATGATTTTCTTCCT-CTTGGAAATTTTTTCTTTGCCCTATTTTCCTTAAAA
1 GATAAATGATATTGATGATTTTCTT-TTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAA
* * * * * *
137829 TCAAATTTCATTCCTTTAATATGGCAAGCATTGATTCTCG-TAATAGCCTCCACTCTTTTTGAGA
65 TCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTTACT-GTCTCCACTCTTTTCGAGA
* ***
137893 TTGGGAACCAAAAACACATTCCTTTCAATAAG-TATGTGACATTGACACTTTAATGTCGCAAGAA
129 TTGGGAACCAAAAACACATTCCTTTCAATAGGATACACGACATTGACACTTTAATGTCGCAAGAA
* * * *
137957 AAGTATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAGT
194 AAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAAT
* *
138022 AGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTA-TCTTCTTATAAGCG-TA
259 AGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-GATA
* *
138085 CACGATATTGATGGTTTGCTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTATAAG
323 CACGATATTGATGGTTTGCTTTCGTAAGAAAGGCTTCCTTCCCACCAATTTTGGTAAAGTCTAAG
* * * * *
138150 TTCGTGCCTTAATTGTGAGAAACATGGATTCTAGTAATGGTCTTCATTCATTTTGTGATTAGGCA
388 TTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACTTTGTGATTAGGCA
* * * * * *
138215 CTATAAACGTATTCTTCT-CATAAGGACAAATGATATTGATGATTTTCTTTTGCATGGAAATCTT
453 GTATAAACTTATTCTCCTCCTTAAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTT
* * *
138279 TTTTTTGCCCTATTTTCCTTAAAATCAAATTTAATTCCTTAAATAAGGCAAGGATTGATTCTCGT
518 TTCTTTGCCCTATTTTCCTTAAAATCAAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCAT
* * * * *
138344 AACATTCTCTACTCTTTTAGAGATTGGGAACCAAAAACACATTCTTTTC-ATCAGGATACACGAC
583 AACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAAT-AGGATACGCGAC
* * *
138408 ATTGACACTTTGATGCCGCAAGAAAAGCATTTC-TTCGAACCTTTTTTGATAGAATCAAAGTTTG
647 ATTGACGCTTTAATGCCGCAAGAAAAGCATTTCTTTC-AACCGTTTTTGATAGAATCAAAGTTTG
* * * *
138472 TCTCTTAAATAAGACAAACATGAGTAGTCATACTAATCTTCACTCTTTTTTGGATTAGG-C-A-T
711 TCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCACTCTTTTTTGGATTAGGCCAACT
*
138534 TAGTCTTCTCATAAGGATACACGGTATTGATCGTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACC
776 TAGTCTTCTCATAAGGATACACGGTATTGATCGTTTGGTTTCATAAGAAAGGCTTTCTTCCCACC
138599 AATTTTGGTAAAGTCTGAGCTCGTGCCTCAATTGTGGCAAACATAGATTGTAGTAATTATCTTCA
841 AATTTTGGTAAAGTCT-AGCTCGTGCCTCAATTGTGGCAAACATAGATTGTAGTAATTATCTTCA
*
138664 TTTACTTTGTGATTAGGCACTATAAACAAAGTCTCCATATTAG
905 TTTACTTTATGATTAGG-ACTATAAACAAAGTCTCC-TATTAG
138707 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
* * * *
138772 CAAA-ATCA-TCTCTTAAATAAGGCAAACATTGATTCTCGTTACTGTCTCCACTCTTTTCAACAT
66 CAAAGTTCATTC-CTTAAATAAGGCAAGCATTGATTCTCGTTACTGTCTCCACTCTTTTCGAGAT
* * * ** ** * * *
138835 TGGGAACCAAAAACACATTCCTTTCATTAGGATAAATGACATTGAGGCTTTGGTGCCGTAAAAAA
130 TGGGAACCAAAAACACATTCCTTTCAATAGGATACACGACATTGACACTTTAATGTCGCAAGAAA
* * * *
138900 AGCATTTCTTTCCACCGTTTTTGACAGAATCAAAGTTTGTCTCTAAAATAAGACAAACACGAATT
195 AGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATA
* * *
138965 GTCATACTAATCCTCATTCTTTTCTGGATTAGCCACCATAAATTTAGTCTTCTCATAAGGATACA
260 GTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACA
* * *
139030 CGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTCCTTCCGACCAATTTTGGTAAAGTCTATGTT
325 CGATATTGATGGTTTGCTTTCGTAAGAAAGGCTTCCTTCCCACCAATTTTGGTAAAGTCTAAGTT
* * * * *
139094 CTTGCCTCAAATGTGCCAAACATTGATTCTAGTAATGATCTTCATTCACGTTGTAATTAGGCAGT
390 CGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACTTTGTGATTAGGCAGT
* *
139159 ATAAACTTATTCTCCTCCTTAA-GATAATTGATATGGATGATTTTCTTTTGCATGAAAATCTTTT
455 ATAAACTTATTCTCCTCCTTAAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTT
* *
139223 CTTTGCCCTATTTTCCTTAAAATCAAATTTCATTCCTTAAATAAGGCAAGGATTGATTCTCATAA
520 CTTTGCCCTATTTTCCTTAAAATCAAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
*
139288 CAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACGCATTCCTTTCAATAGGATACGCGACATT
585 CAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATT
* * *
139353 GACGCTTTAATGTCGCAAGAAAATG-ATTTCTTTCAACCATTTTTTTATAGAATCAAAGTTTGTC
650 GACGCTTTAATGCCGCAAGAAAA-GCATTTCTTTCAACC-GTTTTTGATAGAATCAAAGTTTGTC
* *
139417 TCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGAGTAGGC
713 TCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCACTCTTTTTTGGATTAGGC
139475 ACCATGATGA
Statistics
Matches: 1532, Mismatches: 159, Indels: 45
0.88 0.09 0.03
Matches are distributed among these distances:
940 2 0.00
941 73 0.05
942 635 0.41
943 129 0.08
947 1 0.00
949 3 0.00
950 425 0.28
951 137 0.09
952 126 0.08
953 1 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.36
Consensus pattern (945 bp):
GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
CAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTTACTGTCTCCACTCTTTTCGAGATT
GGGAACCAAAAACACATTCCTTTCAATAGGATACACGACATTGACACTTTAATGTCGCAAGAAAA
GCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAG
TCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACAC
GATATTGATGGTTTGCTTTCGTAAGAAAGGCTTCCTTCCCACCAATTTTGGTAAAGTCTAAGTTC
GTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACTTTGTGATTAGGCAGTA
TAAACTTATTCTCCTCCTTAAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
TTTGCCCTATTTTCCTTAAAATCAAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
AATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
ACGCTTTAATGCCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
TAAATAAGACAAACATGAATAGTCACACAAATCCTCACTCTTTTTTGGATTAGGCCAACTTAGTC
TTCTCATAAGGATACACGGTATTGATCGTTTGGTTTCATAAGAAAGGCTTTCTTCCCACCAATTT
TGGTAAAGTCTAGCTCGTGCCTCAATTGTGGCAAACATAGATTGTAGTAATTATCTTCATTTACT
TTATGATTAGGACTATAAACAAAGTCTCCTATTAG
Found at i:142961 original size:475 final size:476
Alignment explanation
Indices: 142000--146558 Score: 5985
Period size: 476 Copynumber: 9.6 Consensus size: 476
141990 TAGGATATAT
* ** * * * * *
142000 GACATTGATGCTTTGGTGTCGTAAAAAAAGCATTTCTTTCAACCATTTTTGACAGAATCAAAGTT
1 GACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTT
* * * *
142065 TATCTC-TAACATAAGACAAACATGAATTGTCATACTAATCCTCATTCTTTTTAGGATTAGGCAC
66 TGTCTCTTAA-ATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCAC
* ** * * *
142129 CATAAACTTAGTTTTCTCATAAGGATACATAATATTGAAGCTTTGGTTTCGTAAGAAAGGCTTTT
130 CATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTC
* * *
142194 TTCCCACCAATTTTGGTAAAGTCTATGTTCATGCCTCAAATGTGAC--ACATGGATTGTAGTAAT
195 TTCCCACCAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGACAAACATGGATTCTAGTAAT
*
142257 GATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTTCTTAGGATAAATGATATGG
260 GATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGG
* * *
142322 ATGATTTTCTTTTGCATGGAAATCTTCTCTTTGCACTATTTTCCTTAAAATCAAAGTTCATTCTT
325 ATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCT
* * * *
142387 TAAATAAGGCAAGCACTGATTCTCATAACAATCTCCACACTTTTTGAGATTGGGAATCAAAAACA
390 TAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACA
* *
142452 CATTCCTTTTAATAGGATACAC
455 CATTCCTTTCAATAGGATACGC
* * * *
142474 GACATTGATGCTTTAATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTCGATAGAATCAAAGTT
1 GACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTT
* ** * **
142539 TGTCTCTCAAATAAGACAAACATGAATAGTCACAGAAATCCTTATTCTTTTTTGGATTAGGCATG
66 TGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACC
* * *
142604 ATAAACTTAGTCTTCTCATAAGCATATACGATATTGATGGCTTGGTTTCGTAAGAAAGGCTTTCT
131 ATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCT
*** * * * ** *
142669 TCCCACCAATTTCAATAAAATGCAAGTTCGTGCCTCAATTGTGACAAACATGGATTCTAG-AATG
196 TCCCACCAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGACAAACATGGATTCTAGTAATG
** * * * * *
142733 ATCTTCATTCATTTTGTGATTAGGCACTATAAACGTATTCTTCTCGTTAGGATAAATGATATTGA
261 ATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGA
* * * * * * *
142798 CGAATTCCTTTTGCATGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATCTAATTTAATTCCTT
326 TGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTT
* * * * * * *
142863 AAATAAGGCAAGCATTGATTCTCGTAATAGTCTCTACTCTTTTCGAGATTAGGAACAAAAAACAG
391 AAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACAC
* *
142928 ATTCCTTTCATTAGGATACAC
456 ATTCCTTTCAATAGGATACGC
* * *
142949 AACATTGATGCTTTGATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTT
1 GACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTT
* * * **
143014 TGTCTCTTAAATAAGACAAACTTGAGTAGTCACACTAGTCCTCATTCTTTTTCAGATTAGGCACC
66 TGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACC
* *
143079 ATAAACTTAGTCTTCCCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAAGGCTTTCT
131 ATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCT
* ** * ** * *
143144 TCCCACCAATTTTTGTAAAGTGTAAGTTCGTGCCTCAATTGTGACAAACACGGATTCTAGTAATG
196 TCCCACCAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGACAAACATGGATTCTAGTAATG
* * ** * * * * * * **
143209 GTATTCATTCATTTTGTTATTAGGCACTATAAACGTATTCTTCTCATAAGGATAAATGATATTCA
261 ATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGA
* * * * * * *
143274 TTATTTTCTTTTGCATGGAAAACTTTTCTTTGCCTTATTTTCCTTCAAACCAAATTTAATTCCTT
326 TGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTT
* * * * * *
143339 AAATAAGGTAAGCATTGATTCT-AGTAATAGTCTCCACTCTTTTCGAGATTAGGCACCAAAAACG
391 AAATAAGGCAAGCATTGATTCTCA-TAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACA
* *
143403 CATTCCTTTTATTAGGATACGC
455 CATTCCTTTCAATAGGATACGC
* ** *
143425 AACATTGATC-CTTTGTTGTCACAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGT
1 GACATTGA-CGCTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGT
* * *
143489 TTGTCTCTTAAATAAGACAAACATGATTAGTGACACAAATCCTCATTCTTTTTTGGATTAGGCAC
65 TTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCAC
* ** * *
143554 CACAAACACAGTCTTCTCATAAGGATACACGATATTGAAGATTTGGTTTCGTAAGAAAGGCTTTC
130 CATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTC
* ** * *** * *
143619 TTCCCACCAATTTCGGTAAAGTGTAAGTTTGTGCCTCAATTGTGACAAACATGGATTCTAGTAAA
195 TTCCCACCAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGACAAACATGGATTCTAGTAAT
* * ** * * * * *
143684 GGTATTCATTCATTTTGTGGTTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATGG
260 GATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGG
* * * *
143749 ATGATTTTCTTTTGCATGGAAATCTTTTATTTGCCCAATTTTCCTTAAAATCAAATTTAATTCCT
325 ATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCT
* * * * *
143814 TAATTAAGGTAAGCATTGATTCTCGTAGCAGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACA
390 TAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACA
* ** * *
143879 CATTTCTTTCGTTAGGAAACAC
455 CATTCCTTTCAATAGGATACGC
* * * * * *
143901 GACACTGACGCTTTGATATCGCAAGAAAAACATTTTTTCCAACCGTTTTTTATAGAATCAAAGTT
1 GACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTT
* *
143966 TGTCTCTTAAATAAGACAAACATGAATAGTTACACAAATCCTCATTCTTTTTTGGATTAGGCACC
66 TGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACC
* * * * *
144031 ATAAACTTAATCTTCTCATAAGCATACAC-ATATCGATGGTTTGGTTACGTAAGAAA-GCTTCCT
131 ATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCT
* * *
144094 TCCCAACAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGCCAAACATGGATTCTAGAAATG
196 TCCCACCAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGACAAACATGGATTCTAGTAATG
* *
144159 ATCTTCATTCCCGTTGTGATTAGGCATTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGA
261 ATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGA
* * * *
144224 TGATTTTTTTTTGCATGGGAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAGTTCATTCTTT
326 TGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTT
** * *
144289 AAATAAGGCAAGCATTGATTCTCATAACAATCTAGACTCTTTTCGAGATTGGGAAACAAAAACAA
391 AAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACAC
144354 ATTCCTTTCAATAGGATACGC
456 ATTCCTTTCAATAGGATACGC
* * * * ** *
144375 GACATTGACGCTTTAAGGTCACATGAAAGGTTTTTCTTCCAACCGTTTTCGATAGAATCAAAGTT
1 GACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTT
* * * *
144440 TGTCTCTTCAATAAGACAAACATGAATAGTCACACAAATCCTCAGTCTTTTCTGGATTAGGCACC
66 TGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACC
* * * *
144505 ATAAACTTAGTCTTCTAATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAA-ACTTCCT
131 ATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCT
* *
144569 TCCCAACAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGCCAAACATGGATTCTAGTAATG
196 TCCCACCAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGACAAACATGGATTCTAGTAATG
* *
144634 ATCTTCATTCACGTTGTGATTAGGCAGTACAAACTTATTCTCCTCTTTAGGATAAATGATATGGA
261 ATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGA
* * * *
144699 TGATTTTCTTTTGTATGAAAATCTTTTCTTTGCTCTATTTTCCTTTAAATCAAAGTTCATTCCTT
326 TGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTT
* * * *
144764 AAATAAGGCAAGCATTGATTCTCATAATAGTCTCCTCTCTTTTCAAGATTGGGAACCAAAAACAC
391 AAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACAC
*
144829 ATTCATTTCAATAGGATACGC
456 ATTCCTTTCAATAGGATACGC
* * * * * *
144850 GACATTGACACTTTGATGTCACAAGAAAACCATTTCTCCCAACCGTTTTTGATAGACTCAAAGTT
1 GACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTT
* ** ** * * *
144915 TGTCCCTTAAATAAGATGAACATGAGGACTCACACTAATCCACATTCCTTTTTGGATTAGGCACC
66 TGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACC
*
144980 ATAAACTTAGTCTTCTCATAAGGA-ATCATGATATTGATGGTTTGGTTTCGT----AA--C---C
131 ATAAACTTAGTCTTCTCATAAGGATA-CACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTC
* * *
145035 TTCCCAACAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGCCAAACATGGATTCTAGAAAT
195 TTCCCACCAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGACAAACATGGATTCTAGTAAT
* * *
145100 CATCTTCATTCACGTTGTGATTAGGTAGTATAAAATTATTCTCCTCCTTAGGATAAATGATATGG
260 GATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGG
*
145165 ATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCTAAGTTCATTCCT
325 ATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCT
* *
145230 TAATTATGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACA
390 TAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACA
* *
145295 CATTCTTTTCAATAGGATACGT
455 CATTCCTTTCAATAGGATACGC
* * *
145317 GACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCATTTTTGATAGAATTAAAGTT
1 GACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTT
* *
145382 TGTCTCTTAAATAAGACAAACGT-AAGTAGTCACACTAATCCTCATTCTTCTTTGGATTAGGCAC
66 TGTCTCTTAAATAAGACAAACATGAA-TAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCAC
* * * * *
145446 CATAAACTTAGTCTTCTCATAAGGATACATGATATGGAAGCTTTGGGTTCGTAAGAAAGGCTTTC
130 CATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTC
* * ** * *
145511 TTCCCACCAATTTTAGTAAAGTCTATGTTCATACCTCGAATGTGACAAACATGGATTGTAGTAAT
195 TTCCCACCAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGACAAACATGGATTCTAGTAAT
* * *
145576 GATCTTCATTCACATTGCGATTAGGCATTATAAACTTATTCTCCTCCTTAGGATAAATGATATGG
260 GATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGG
* *
145641 ATGATTTTCTTTTGCATGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAGTTCATTCTT
325 ATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCT
* * *
145706 TAAATAAGGCAAGCATTGATTCTCATAACAATCTCTACTCTTCTCGAGATTGGGAAACAAAAACA
390 TAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACA
145771 CATTCCTTTCAATAGGATACGC
455 CATTCCTTTCAATAGGATACGC
* * * * ** * *
145793 GACATTGACGCTTTAAGGTCACATGAAAGGTTTTTCTTCCAACCATTTCTGATAGAATCAAAGTT
1 GACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTT
* * *
145858 TGTCTCTTCAATAAGACACCATAAGATGAACATGAGGAGTCACACTAATCCACATTCTTTTTTGG
66 TGTCTCTTAAATAAG--A-CA-AACATG-A-AT----AGTCACACTAATCCTCATTCTTTTTTGG
145923 ATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGA
121 ATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGA
* * * * *
145988 AA-GCTTCCATCCCACCAATTTTGGTAAAGTCCATGTTAACGCCTTAAATGTGCCAAACATGGAT
186 AAGGCTTTCTTCCCACCAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGACAAACATGGAT
* * *
146052 TCTAGAAATGATCTTCATTCACGTTGTGATTAGGTAGTATAAACTTATTCTCCTCCTTAGGGTAA
251 TCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAA
* * * *
146117 ATAATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTCGCCCTATTTTCCATAAAATCTAAG
316 ATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAG
146182 TTCATTCCTTAAA-AATGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGA
381 TTCATTCCTTAAATAA-GGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGA
*
146246 ACCAAAAACACATTCCTTTCAATACGATACGC
445 ACCAAAAACACATTCCTTTCAATAGGATACGC
* * *
146278 GACATTTACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATTAAAGTT
1 GACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTT
* * *
146343 TGTCTCTTAAATAAGAGAAACATGAGTAGTCACACTAATCCTCATTCTTTTTCGGATTAGGCACC
66 TGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACC
* * * *
146408 ATAAACTTAGTCTTCTCAAAATGATACACGATATTGATCGTTTGGTTTCGTAAGCAAGGCTTTCT
131 ATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCT
* * * ** * * * * *
146473 TCCCACCAATTTTGTTAAAGTCTAGGTTTGCACCTCAATTATGGCAAACATGGATTGTAGTAATG
196 TCCCACCAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGACAAACATGGATTCTAGTAATG
* *
146538 ATCTTCATTTACTTTGTGATT
261 ATCTTCATTCACGTTGTGATT
146559 GTCGCAACGT
Statistics
Matches: 3601, Mismatches: 450, Indels: 66
0.87 0.11 0.02
Matches are distributed among these distances:
466 1 0.00
467 418 0.12
468 1 0.00
470 1 0.00
471 4 0.00
473 1 0.00
474 585 0.16
475 975 0.27
476 1181 0.33
478 1 0.00
479 3 0.00
480 4 0.00
481 5 0.00
482 3 0.00
483 2 0.00
484 2 0.00
485 326 0.09
486 88 0.02
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.36
Consensus pattern (476 bp):
GACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTT
TGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACC
ATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGGCTTTCT
TCCCACCAATTTTGGTAAAGTCCATGTTCACGCCTCAAATGTGACAAACATGGATTCTAGTAATG
ATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGA
TGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTT
AAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACAC
ATTCCTTTCAATAGGATACGC
Found at i:149688 original size:52 final size:51
Alignment explanation
Indices: 149603--149726 Score: 212
Period size: 52 Copynumber: 2.4 Consensus size: 51
149593 ATATGAAAAG
* *
149603 TTGCTTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGCAAA
1 TTGCCTGCATGTATCGATACATTTAATAATGTATCGATACATCTGGGCAAA
*
149654 TTTGCCTGCATGTATCGATACATTTTATAATGTATCGATACATCTGGGCAAA
1 -TTGCCTGCATGTATCGATACATTTAATAATGTATCGATACATCTGGGCAAA
149706 TTGCCTGCATGTATCGATACA
1 TTGCCTGCATGTATCGATACA
149727 AAGATCAGTG
Statistics
Matches: 69, Mismatches: 3, Indels: 1
0.95 0.04 0.01
Matches are distributed among these distances:
51 21 0.30
52 48 0.70
ACGTcount: A:0.28, C:0.18, G:0.19, T:0.35
Consensus pattern (51 bp):
TTGCCTGCATGTATCGATACATTTAATAATGTATCGATACATCTGGGCAAA
Found at i:149739 original size:51 final size:51
Alignment explanation
Indices: 149603--149746 Score: 202
Period size: 52 Copynumber: 2.8 Consensus size: 51
149593 ATATGAAAAG
*
149603 TTGCTTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGCAAAT
1 TTGCCTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTGGGCAAAT
* *
149655 TTGCCTGCATGTATCGATACATTTTATAATGTATCGATACATCTGGGCAAA-
1 TTGCCTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTGGGCAAAT
*
149706 TTGCCTGCATGTATCGATACA-AAGATCAGTGTATCGATACA
1 TTGCCTGCATGTATCGATACATTA-AT-AGTGTATCGATACA
149747 ATGTATCGAT
Statistics
Matches: 84, Mismatches: 6, Indels: 5
0.88 0.06 0.05
Matches are distributed among these distances:
50 2 0.02
51 34 0.40
52 48 0.57
ACGTcount: A:0.30, C:0.17, G:0.19, T:0.34
Consensus pattern (51 bp):
TTGCCTGCATGTATCGATACATTAATAGTGTATCGATACATCTGGGCAAAT
Found at i:149753 original size:13 final size:13
Alignment explanation
Indices: 149735--149759 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
149725 CAAAGATCAG
149735 TGTATCGATACAA
1 TGTATCGATACAA
149748 TGTATCGATACA
1 TGTATCGATACA
149760 TTTGAGTAAT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:149837 original size:33 final size:33
Alignment explanation
Indices: 149800--149866 Score: 98
Period size: 33 Copynumber: 2.0 Consensus size: 33
149790 AGTAGCTTAA
149800 ATTGTATCGATACAAAAAAATATGTATCGATAC
1 ATTGTATCGATACAAAAAAATATGTATCGATAC
* ***
149833 ATTGTATCGATACAACATTTTATGTATCGATAC
1 ATTGTATCGATACAAAAAAATATGTATCGATAC
149866 A
1 A
149867 AATCGTTGAA
Statistics
Matches: 30, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
33 30 1.00
ACGTcount: A:0.40, C:0.13, G:0.12, T:0.34
Consensus pattern (33 bp):
ATTGTATCGATACAAAAAAATATGTATCGATAC
Found at i:149840 original size:13 final size:13
Alignment explanation
Indices: 149822--149846 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
149812 CAAAAAAATA
149822 TGTATCGATACAT
1 TGTATCGATACAT
149835 TGTATCGATACA
1 TGTATCGATACA
149847 ACATTTTATG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:150860 original size:49 final size:49
Alignment explanation
Indices: 150743--151747 Score: 1235
Period size: 49 Copynumber: 20.7 Consensus size: 49
150733 AAAATGATGT
* * *
150743 CAATGTGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGGAAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGAT-G--AAGGTGC
* ** * * *
150795 CGATATGCTGATTCAAGGGAAAGCCATTTTGG-TTTAAAGATGAAGGTGC
1 CAATATGCTGATTCAA-GGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* * * *
150844 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* *
150893 CAATATGCTGATTCAAGGCCAGCTATA-TGGACTTAATGGTGCAA-GTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATG-AAGGTGC
* * * * *
150941 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAAGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* * *
150990 CAATATGTTGATTCAAGGCCAGCTATATTGGACTTAATGGTGAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* * *
151039 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATGGAAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGAT-G--AAGGTGC
*
151091 CGATATGCTGATTCAAGGCCAGCTATATTGGACTT----A--AAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* * *
151134 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGGTG-AGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
*
151182 CAATGTGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* * *
151231 CAATATGCTGATTCAGGGCCAGCTATATTGGTCTTAAAGATAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* * *
151280 CAATATGCTGATTCAAGGCCAGCTATATTGGGCTTAATGGTGAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* * * *
151329 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* *
151378 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAATGGTGAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* * *
151427 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATGGAAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGAT-G--AAGGTGC
151479 CAATATGCTGATTCAAGGCCAGCTATATTGGACTT----A--AAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* *
151522 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
151571 CAATATGCTGATTCAAGGCCAGCTATATTGGACTT----A--AAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* * * *
151614 CAATGTGCTGATTCAAGGCCAGCTACATTGGTCTTAAAGATAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* * * *
151663 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
* *
151712 CAATATGCTGATTCAAGGCCAGCTACATTGGGCTTA
1 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTA
151748 GAAGGGTTGC
Statistics
Matches: 826, Mismatches: 97, Indels: 63
0.84 0.10 0.06
Matches are distributed among these distances:
43 118 0.14
45 1 0.00
47 2 0.00
48 99 0.12
49 495 0.60
50 2 0.00
51 1 0.00
52 99 0.12
53 9 0.01
ACGTcount: A:0.31, C:0.18, G:0.26, T:0.26
Consensus pattern (49 bp):
CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGATGAAGGTGC
Found at i:151308 original size:98 final size:98
Alignment explanation
Indices: 150743--151747 Score: 1415
Period size: 98 Copynumber: 10.4 Consensus size: 98
150733 AAAATGATGT
* *
150743 CAATGTGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGGAAAAGGTGCCGATATGCTGATT
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT---AAAGGTGCCAATATGCTGATT
** * * * *
150808 CAAGGGAAAGCCATTTTGG-TTTAAAGATGAAGGTGC
63 CAA-GGCCAGCTATATTGGACTTAATGATGAAGGTGC
*
150844 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAA
*
150909 GGCCAGCTATA-TGGACTTAATGGTGCAA-GTGC
66 GGCCAGCTATATTGGACTTAATGATG-AAGGTGC
* * *
150941 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAAGTGCCAATATGTTGATTCAA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAA
*
151006 GGCCAGCTATATTGGACTTAATGGTGAAGGTGC
66 GGCCAGCTATATTGGACTTAATGATGAAGGTGC
* *
151039 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATGGAAAAGGTGCCGATATGCTGATT
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT---AAAGGTGCCAATATGCTGATT
151104 CAAGGCCAGCTATATTGGAC-T--T-A--AAGGTGC
63 CAAGGCCAGCTATATTGGACTTAATGATGAAGGTGC
* * *
151134 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGGT-GAGGTGCCAATGTGCTGATTCAA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAA
*
151198 GGCCAGCTATATTGGACTTAAAGATGAAGGTGC
66 GGCCAGCTATATTGGACTTAATGATGAAGGTGC
* * * *
151231 CAATATGCTGATTCAGGGCCAGCTATATTGGTCTTAAAGATAAAGGTGCCAATATGCTGATTCAA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAA
* *
151296 GGCCAGCTATATTGGGCTTAATGGTGAAGGTGC
66 GGCCAGCTATATTGGACTTAATGATGAAGGTGC
*
151329 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAA
*
151394 GGCCAGCTATATTGGACTTAATGGTGAAGGTGC
66 GGCCAGCTATATTGGACTTAATGATGAAGGTGC
*
151427 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATGGAAAAGGTGCCAATATGCTGATT
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT---AAAGGTGCCAATATGCTGATT
151492 CAAGGCCAGCTATATTGGAC-T--T-A--AAGGTGC
63 CAAGGCCAGCTATATTGGACTTAATGATGAAGGTGC
*
151522 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATATGCTGATTCAA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAA
151587 GGCCAGCTATATTGGAC-T--T-A--AAGGTGC
66 GGCCAGCTATATTGGACTTAATGATGAAGGTGC
* * *
151614 CAATGTGCTGATTCAAGGCCAGCTACATTGGTCTTAAAGATAAAGGTGCCAATGTGCTGAGTCAA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAA
* * *
151679 GGCCAGCTACATTGGACTTAAAGATAAAGGTGC
66 GGCCAGCTATATTGGACTTAATGATGAAGGTGC
* *
151712 CAATATGCTGATTCAAGGCCAGCTACATTGGGCTTA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTA
151748 GAAGGGTTGC
Statistics
Matches: 832, Mismatches: 49, Indels: 49
0.89 0.05 0.05
Matches are distributed among these distances:
91 37 0.04
92 128 0.15
93 1 0.00
95 94 0.11
96 4 0.00
97 137 0.16
98 311 0.37
100 2 0.00
101 118 0.14
ACGTcount: A:0.31, C:0.18, G:0.26, T:0.26
Consensus pattern (98 bp):
CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAA
GGCCAGCTATATTGGACTTAATGATGAAGGTGC
Found at i:151504 original size:388 final size:389
Alignment explanation
Indices: 150743--151747 Score: 1652
Period size: 388 Copynumber: 2.6 Consensus size: 389
150733 AAAATGATGT
* *
150743 CAATGTGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGGAAAAGGTGCCGATATGCTGATT
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT-G--AAGGTGCCAATATGCTGATT
** * * * *
150808 CAAGGGAAAGCCATTTTGG-TTTAAAGATGAAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACAT
63 CAA-GGCCAGCTATATTGGACTTAAAGATGAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACAT
*
150872 TGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATA-TGGACTTAATGGTGCA
127 TGGTCTTAAAGATAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAATGGTG-A
*
150936 A-GTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAAGTGCCAATATGTTG
191 AGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAAGTGCCAATATGCTG
151000 ATTCAAGGCCAGCTATATTGGACTTAATGGTGAAGGTGCCAATGTGCTGAGTCAAGGCCAGCTAC
256 ATTCAAGGCCAGCTATATTGGACTTAATGGTGAAGGTGCCAATGTGCTGAGTCAAGGCCAGCTAC
*
151065 ATTGGACTTAAAGATGGAAAAGGTGCCGATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAG
321 ATTGGACTTAAAGATGGAAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAG
151130 GTGC
386 GTGC
* *
151134 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGGTG-AGGTGCCAATGTGCTGATTCAA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATATGCTGATTCAA
* * *
151198 GGCCAGCTATATTGGACTTAAAGATGAAGGTGCCAATATGCTGATTCAGGGCCAGCTATATTGGT
66 GGCCAGCTATATTGGACTTAAAGATGAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGT
*
151263 CTTAAAGATAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGGCTTAATGGTGAAGGTG
131 CTTAAAGATAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAATGGTGAAGGTG
*
151328 CCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCA
196 CCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAAGTGCCAATATGCTGATTCA
151393 AGGCCAGCTATATTGGACTTAATGGTGAAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGG
261 AGGCCAGCTATATTGGACTTAATGGTGAAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGG
151458 ACTTAAAGATGGAAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGGTGC
326 ACTTAAAGATGGAAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGGTGC
151522 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATATGCTGATTCAA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATATGCTGATTCAA
151587 GGCCAGCTATATTGGACTT----A--AAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGT
66 GGCCAGCTATATTGGACTTAAAGATGAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGT
* * * * * *
151646 CTTAAAGATAAAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTG
131 CTTAAAGATAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAATGGTGAAGGTG
* * *
151711 CCAATATGCTGATTCAAGGCCAGCTACATTGGGCTTA
196 CCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTA
151748 GAAGGGTTGC
Statistics
Matches: 577, Mismatches: 33, Indels: 16
0.92 0.05 0.03
Matches are distributed among these distances:
383 128 0.22
385 1 0.00
386 11 0.02
387 109 0.19
388 248 0.43
389 40 0.07
390 1 0.00
391 39 0.07
ACGTcount: A:0.31, C:0.18, G:0.26, T:0.26
Consensus pattern (389 bp):
CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATATGCTGATTCAA
GGCCAGCTATATTGGACTTAAAGATGAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGT
CTTAAAGATAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAATGGTGAAGGTG
CCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAAGTGCCAATATGCTGATTCA
AGGCCAGCTATATTGGACTTAATGGTGAAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGG
ACTTAAAGATGGAAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTTAAAGGTGC
Found at i:151860 original size:34 final size:34
Alignment explanation
Indices: 151747--152171 Score: 607
Period size: 34 Copynumber: 13.0 Consensus size: 34
151737 CATTGGGCTT
*
151747 AGAAGGG-TTGCCACCGACTTGTGTGGGCTTTAG
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
* *
151780 AG-AGGG-TTGCCATCGACTTGTGTGGGCTTT-G
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
*
151811 AG--GGGGTTGCCACCAACTTGTGTGGGCTTTAG
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
151843 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
* *
151877 AG-AGGG-TTGCCATCGACTTGTGTGGGCTTT-G
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
*
151908 AG--GGGGTTGCCACCAACTTGTGTGGGCTTTAG
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
151940 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
* *
151974 AGAA-GGTTTGCCATCGACTTGTGTGGGCTTTAG
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
152007 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
*
152041 AG-AGGG-TTGCCATCAACTTGTGTGGGCTTT-G
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
*
152072 AG--GGGGTTGCCACCAACTTGTGTGGGCTTTAG
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
152104 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
* *
152138 AGAA-GGTTTGCCATCGACTTGTGTGGGCTTTAG
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
152171 A
1 A
152172 AAAATATGCC
Statistics
Matches: 361, Mismatches: 18, Indels: 26
0.89 0.04 0.06
Matches are distributed among these distances:
30 9 0.02
31 76 0.21
32 81 0.22
33 69 0.19
34 126 0.35
ACGTcount: A:0.18, C:0.17, G:0.35, T:0.30
Consensus pattern (34 bp):
AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
Found at i:151920 original size:97 final size:99
Alignment explanation
Indices: 151747--152171 Score: 670
Period size: 97 Copynumber: 4.4 Consensus size: 99
151737 CATTGGGCTT
*
151747 AGAAGGG-TTGCCACCGACTTGTGTGGGCTTTAGAGAGGGTTGCCATCGACTTGTGTGGGCTTT-
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAGGGTTGCCATCGACTTGTGTGGGCTTTA
151810 GAG-GGGGTTGCCACCAACTTGTGTGGGCTTTAG
66 GAGAGGGGTTGCCACCAACTTGTGTGGGCTTTAG
151843 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAGGGTTGCCATCGACTTGTGTGGGCTTT-
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAGGGTTGCCATCGACTTGTGTGGGCTTTA
151907 GAG-GGGGTTGCCACCAACTTGTGTGGGCTTTAG
66 GAGAGGGGTTGCCACCAACTTGTGTGGGCTTTAG
*
151940 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGTTTGCCATCGACTTGTGTGGGCTTT
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAG-AGGGTTGCCATCGACTTGTGTGGGCTTT
*
152005 AGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
65 AGAG-AGGGGTTGCCACCAACTTGTGTGGGCTTTAG
* * * *
152041 AG-AGGG-TTGCCATCAACTTGTGTGGGCTTT-GAGGGGGTTGCCACCAACTTGTGTGGGCTTTA
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAGGGTTGCCATCGACTTGTGTGGGCTTTA
*
152103 GAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
66 GAG-AGGGGTTGCCACCAACTTGTGTGGGCTTTAG
* *
152138 AGAA-GGTTTGCCATCGACTTGTGTGGGCTTTAGA
1 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGA
152172 AAAATATGCC
Statistics
Matches: 312, Mismatches: 9, Indels: 13
0.93 0.03 0.04
Matches are distributed among these distances:
96 7 0.02
97 188 0.60
98 54 0.17
99 28 0.09
100 4 0.01
101 31 0.10
ACGTcount: A:0.18, C:0.17, G:0.35, T:0.30
Consensus pattern (99 bp):
AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAGGGTTGCCATCGACTTGTGTGGGCTTTA
GAGAGGGGTTGCCACCAACTTGTGTGGGCTTTAG
Found at i:152020 original size:164 final size:164
Alignment explanation
Indices: 151751--152171 Score: 742
Period size: 164 Copynumber: 2.6 Consensus size: 164
151741 GGGCTTAGAA
* * *
151751 GGGTTGCCACCGACTTGTGTGGGCTTTAGAG-AGGG-TTGCCATCGACTTGTGTGGGCTTT-GAG
1 GGGTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAG
* * * *
151813 -GGGGTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
66 AAGGTTTGCCATCGACTTGTGTGGGCTTTAGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
*
151877 AGAGGGTTGCCATCGACTTGTGTGGGCTTTGAGG
131 AGAGGGTTGCCATCAACTTGTGTGGGCTTTGAGG
151911 GGGTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAG
1 GGGTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAG
151976 AAGGTTTGCCATCGACTTGTGTGGGCTTTAGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
66 AAGGTTTGCCATCGACTTGTGTGGGCTTTAGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
152041 AGAGGGTTGCCATCAACTTGTGTGGGCTTTGAGG
131 AGAGGGTTGCCATCAACTTGTGTGGGCTTTGAGG
152075 GGGTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAG
1 GGGTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAG
152140 AAGGTTTGCCATCGACTTGTGTGGGCTTTAGA
66 AAGGTTTGCCATCGACTTGTGTGGGCTTTAGA
152172 AAAATATGCC
Statistics
Matches: 249, Mismatches: 8, Indels: 4
0.95 0.03 0.02
Matches are distributed among these distances:
160 30 0.12
161 4 0.02
162 22 0.09
163 3 0.01
164 190 0.76
ACGTcount: A:0.17, C:0.17, G:0.35, T:0.30
Consensus pattern (164 bp):
GGGTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAG
AAGGTTTGCCATCGACTTGTGTGGGCTTTAGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
AGAGGGTTGCCATCAACTTGTGTGGGCTTTGAGG
Found at i:152208 original size:97 final size:97
Alignment explanation
Indices: 151747--152310 Score: 612
Period size: 97 Copynumber: 5.9 Consensus size: 97
151737 CATTGGGCTT
* * *
151747 AGAAGGGTTGCCACCGACTTGTGTGGGCTTTAGAGAGGGTTGCCATCGACTTGTGTGGGC-TTTG
1 AGAAGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGTTGCCATCGACTTGTGTGGGCTTTTG
**
151811 AGGGGGTTGCCACCAACTTGTGTGGGCTTTAG
66 AAAGGGTTGCCACCAACTTGTGTGGGCTTTAG
*
151843 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAGGGTTGCCATCGACTTGTGTGGGC-TTT
1 AGAA-GGTTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGTTGCCATCGACTTGTGTGGGCTTTT
**
151907 GAGGGGGTTGCCACCAACTTGTGTGGGCTTTAG
65 GAAAGGGTTGCCACCAACTTGTGTGGGCTTTAG
151940 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGTTTGCCATCGACTTGTGTGGGCTTT
1 AGAA-GGTTTGCCACCAACTTGTGTGGGCTTTAGAGAAGG-TTGCCATCGACTTGTGTGGGCTTT
*
152005 AGAGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
64 TGA-AAGGG-TTGCCACCAACTTGTGTGGGCTTTAG
* * ** * * *
152041 AG-AGGGTTGCCATCAACTTGTGTGGGCTTT-GAGGGGGTTGCCACCAACTTGTGTGGGCTTTAG
1 AGAAGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGTTGCCATCGACTTGTGTGGGCTTTTG
152104 AGAAGGGTTTGCCACCAACTTGTGTGGGCTTTAG
66 A-AAGGG-TTGCCACCAACTTGTGTGGGCTTTAG
* * **
152138 AGAAGGTTTGCCATCGACTTGTGTGGGCTTTAGA-AAAATATGCCA-CTGAC-T-TGTGGGCTTT
1 AGAAGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGT-TGCCATC-GACTTGTGTGGGCTTT
* *
152199 TGAACAGGG-TGCCACTAAC-T-TGTGGGCTTT-T
64 TGAA-AGGGTTGCCACCAACTTGTGTGGGCTTTAG
** * **
152230 A-AAGG-TTGCCACTGAC-T-TGTGGGCTTTTGA-AAAATATGCCA-CTGAC-T-TGTGGGCTTT
1 AGAAGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGT-TGCCATC-GACTTGTGTGGGCTTT
*
152287 TGAAAAGGG-TGCCACTAACTTGTG
64 TG-AAAGGGTTGCCACCAACTTGTG
152311 GGCTGAAAAG
Statistics
Matches: 430, Mismatches: 25, Indels: 32
0.88 0.05 0.07
Matches are distributed among these distances:
88 55 0.13
89 4 0.01
90 11 0.03
91 4 0.01
92 1 0.00
93 10 0.02
94 1 0.00
95 9 0.02
96 5 0.01
97 205 0.48
98 55 0.13
99 38 0.09
100 4 0.01
101 28 0.07
ACGTcount: A:0.19, C:0.17, G:0.33, T:0.30
Consensus pattern (97 bp):
AGAAGGTTTGCCACCAACTTGTGTGGGCTTTAGAGAAGGTTGCCATCGACTTGTGTGGGCTTTTG
AAAGGGTTGCCACCAACTTGTGTGGGCTTTAG
Found at i:152400 original size:29 final size:29
Alignment explanation
Indices: 152351--152523 Score: 170
Period size: 29 Copynumber: 5.9 Consensus size: 29
152341 TTACAAAAGA
* * *
152351 AAAAGAGTGCCACGGAGTTGTGGACTTTGG
1 AAAAGA-TGCCACTGACTTGTGGGCTTTGG
* *
152381 AAAAGATGCCACCGACTTGTGGGCTTCGG
1 AAAAGATGCCACTGACTTGTGGGCTTTGG
* *
152410 AAAAGGGTGCCACTGATTTGTGGGCTTT-G
1 AAAA-GATGCCACTGACTTGTGGGCTTTGG
* * *
152439 -AAGGTTGCCACTGACTTGTGGGCTTTCGA
1 AAAAGATGCCACTGACTTGTGGGCTTT-GG
* * *
152468 AAAAAATGCCACCGACTTGTGGGCTTTGA
1 AAAAGATGCCACTGACTTGTGGGCTTTGG
* *
152497 AAAAAATGCCACTGACTTGTGGACTTT
1 AAAAGATGCCACTGACTTGTGGGCTTT
152524 TGAAGGGTGA
Statistics
Matches: 121, Mismatches: 18, Indels: 9
0.82 0.12 0.06
Matches are distributed among these distances:
27 21 0.17
28 2 0.02
29 51 0.42
30 47 0.39
ACGTcount: A:0.25, C:0.18, G:0.29, T:0.27
Consensus pattern (29 bp):
AAAAGATGCCACTGACTTGTGGGCTTTGG
Found at i:152458 original size:121 final size:116
Alignment explanation
Indices: 152236--152518 Score: 300
Period size: 121 Copynumber: 2.4 Consensus size: 116
152226 TTTTAAAGGT
* * **
152236 TGCCACTGACTTGTGGGCTTTTGAAAAATATGCCACTGACTTGTGGGCTTTTGAAAAGGGTGCCA
1 TGCCACCGACTTGTGGGC-TTTGAAAAAAATGCCACTGACTTGTGGGCTTCGGAAAAGGGTGCCA
* * *
152301 CTAACTTGTGGGCTGAAAAGAGTGCTATAGAGTTGTGAGCTTACAAAAGAAAAAGAG
65 CTAACTTGTGGGCTGAAAAGAGTGCCATAGACTTGTGAGCTTAC----GAAAAA-AA
* * * * * *
152358 TGCCACGGAGTTGTGGACTTTGGAAAAGATGCCACCGACTTGTGGGCTTCGGAAAAGGGTGCCAC
1 TGCCACCGACTTGTGGGCTTTGAAAAAAATGCCACTGACTTGTGGGCTTCGGAAAAGGGTGCCAC
* * *** * *
152423 TGATTTGTGGGCTTTGAAG-GTTGCCACT-GACTTGTGGGCTTTCGAAAAAAA
66 TAACTTGTGGGCTGAAAAGAG-TGCCA-TAGACTTGTGAGCTTACGAAAAAAA
152474 TGCCACCGACTTGTGGGCTTTGAAAAAAATGCCACTGACTTGTGG
1 TGCCACCGACTTGTGGGCTTTGAAAAAAATGCCACTGACTTGTGG
152519 ACTTTTGAAG
Statistics
Matches: 135, Mismatches: 24, Indels: 10
0.80 0.14 0.06
Matches are distributed among these distances:
116 40 0.30
117 6 0.04
120 1 0.01
121 72 0.53
122 16 0.12
ACGTcount: A:0.27, C:0.17, G:0.29, T:0.27
Consensus pattern (116 bp):
TGCCACCGACTTGTGGGCTTTGAAAAAAATGCCACTGACTTGTGGGCTTCGGAAAAGGGTGCCAC
TAACTTGTGGGCTGAAAAGAGTGCCATAGACTTGTGAGCTTACGAAAAAAA
Found at i:152470 original size:57 final size:58
Alignment explanation
Indices: 152126--152523 Score: 256
Period size: 57 Copynumber: 6.7 Consensus size: 58
152116 CACCAACTTG
* ***
152126 TGTGGGCTTTAGAGAAGGTTTGCCA-TCGACTTGTGTGGGCTTTAGAAAAATATGCCACTGACT
1 TGTGGGCTTT-GA-AAGG-TTGCCACT-GAC-T-TGTGGGCTTTCGAAAAGGGTGCCACTGACT
* * * *
152189 TGTGGGCTTTTGAACAGGGTGCCACTAACTTGTGGGCTTT--TAAAGGTTGCCACTGACT
1 TGTGGGC-TTTGAA-AGGTTGCCACTGACTTGTGGGCTTTCGAAAAGGGTGCCACTGACT
** * *
152247 TGTGGGCTTTTGAAAAATATGCCACTGACTTGTGGGCTTTTGAAAAGGGTGCCACTAACT
1 TGTGGGC-TTTGAAAGGT-TGCCACTGACTTGTGGGCTTTCGAAAAGGGTGCCACTGACT
* * * * * * *
152307 TGTGGGC--TGAAAAGAG-TGCTA-TAGAGTTGTGAGCTTACAAAAGAAAAAGAGTGCCACGGAG
1 TGTGGGCTTTG-AAAG-GTTGCCACT-GACTTGTGGGCTTTC----G-AAAAGGGTGCCACTGAC
152368 T
58 T
* * * * *
152369 TGTGGACTTTGGAAAAGATGCCACCGACTTGTGGGC-TTCGGAAAAGGGTGCCACTGATT
1 TGTGGGCTTT-GAAAGGTTGCCACTGACTTGTGGGCTTTC-GAAAAGGGTGCCACTGACT
*** *
152428 TGTGGGCTTTG-AAGGTTGCCACTGACTTGTGGGCTTTCGAAAAAAATGCCACCGACT
1 TGTGGGCTTTGAAAGGTTGCCACTGACTTGTGGGCTTTCGAAAAGGGTGCCACTGACT
*** *
152485 TGTGGGCTTTGAAAAAAATGCCACTGACTTGTGGACTTT
1 TGTGGGCTTTG-AAAGGTTGCCACTGACTTGTGGGCTTT
152524 TGAAGGGTGA
Statistics
Matches: 265, Mismatches: 48, Indels: 48
0.73 0.13 0.13
Matches are distributed among these distances:
56 1 0.00
57 63 0.24
58 55 0.21
59 46 0.17
60 33 0.12
61 2 0.01
62 28 0.11
63 16 0.06
64 20 0.08
65 1 0.00
ACGTcount: A:0.25, C:0.17, G:0.29, T:0.29
Consensus pattern (58 bp):
TGTGGGCTTTGAAAGGTTGCCACTGACTTGTGGGCTTTCGAAAAGGGTGCCACTGACT
Found at i:152526 original size:30 final size:30
Alignment explanation
Indices: 152159--152527 Score: 285
Period size: 30 Copynumber: 12.5 Consensus size: 30
152149 CATCGACTTG
* *
152159 TGTGGGCTTTAGAAAAATATGCCACTGACT
1 TGTGGGCTTTTGAAAAAGATGCCACTGACT
* * * *
152189 TGTGGGCTTTTGAACAGGGTGCCACTAACT
1 TGTGGGCTTTTGAAAAAGATGCCACTGACT
* *
152219 TGTGGGCTTTT--AAAGGTTGCCACTGACT
1 TGTGGGCTTTTGAAAAAGATGCCACTGACT
*
152247 TGTGGGCTTTTGAAAAATATGCCACTGACT
1 TGTGGGCTTTTGAAAAAGATGCCACTGACT
* * *
152277 TGTGGGCTTTTGAAAAGGGTGCCACTAACT
1 TGTGGGCTTTTGAAAAAGATGCCACTGACT
* *
152307 TGTGGGC---TG-AAAAGAGTGCTA-TAGAGT
1 TGTGGGCTTTTGAAAAAGA-TGCCACT-GACT
* ** * *
152334 TGTGAGCTTACAAAAGAAAAAGAGTGCCACGGAGT
1 TGTGGGCTT----TTGAAAAAGA-TGCCACTGACT
* * *
152369 TGTGGAC-TTTGGAAAAGATGCCACCGACT
1 TGTGGGCTTTTGAAAAAGATGCCACTGACT
** * * *
152398 TGTGGGCTTCGGAAAAGGGTGCCACTGATT
1 TGTGGGCTTTTGAAAAAGATGCCACTGACT
* *
152428 TGTGGGC-TTTG--AAGGTTGCCACTGACT
1 TGTGGGCTTTTGAAAAAGATGCCACTGACT
* * *
152455 TGTGGGCTTTCGAAAAAAATGCCACCGACT
1 TGTGGGCTTTTGAAAAAGATGCCACTGACT
*
152485 TGTGGGC-TTTGAAAAAAATGCCACTGACT
1 TGTGGGCTTTTGAAAAAGATGCCACTGACT
*
152514 TGTGGACTTTTGAA
1 TGTGGGCTTTTGAA
152528 GGGTGATGAA
Statistics
Matches: 269, Mismatches: 52, Indels: 36
0.75 0.15 0.10
Matches are distributed among these distances:
26 5 0.02
27 35 0.13
28 28 0.10
29 43 0.16
30 136 0.51
34 2 0.01
35 20 0.07
ACGTcount: A:0.26, C:0.17, G:0.29, T:0.28
Consensus pattern (30 bp):
TGTGGGCTTTTGAAAAAGATGCCACTGACT
Found at i:155369 original size:159 final size:160
Alignment explanation
Indices: 154677--156322 Score: 535
Period size: 159 Copynumber: 10.4 Consensus size: 160
154667 AAAAATCTTT
* * * * * * *
154677 ATTCTTTTTG-GATAAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTT
1 ATTCATTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATACACGATATTGATGGTTT
* * * ** * **
154741 GGTTTCATAATAAAGGC-TTTCTTCCCACCAATTTCGGTAAAGTGTAAGTTCGTGCCTCAAGTGT
66 GGTTTCATAAAAAAAGCATTTCTTCCCACTAATTTCGGTAAAGTCAAAGTTCGTGCCTCAAATAA
* *
154805 GACAAACATGGATTC-TAGTAATGGTTTCC
131 GACAAACATGGATTCACAGTAATGGTCTCC
** * * * *
154834 ATTCATTTTGTGATTAGGCACTATAAATGTATTCTTCTCAATAGGATAAATGATATTGATGATTT
1 ATTCATTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATACACGATATTGATGGTTT
** ** *** * * * * ** * * ** * *
154899 TCTTTTGTAGGGAAATCTTTTCTTTGCC-CTATTTTCCTTAAAATCAAATTTAATTCCTTAAATA
66 GGTTTCATAAAAAAAGCATTTC-TTCCCACTAATTTCGGTAAAGTCAAAGTTCGTGCCTCAAATA
* * * * *
154963 AGGCAAGCATTGATTCTC-GTAATAGTCTCC
130 AGACAAACATGGATTCACAGTAATGGTCTCC
* * * * * * * *
154993 ACTC-TTTTCGAGATTAGGCACCCA-AAACACATTCCTT-TCATTAGGATACGCAACATTGATGC
1 ATTCATTTT-GTGATTAGGCA-CTATAAACATATT-CTTCTCATTAGGATACACGATATTGATGG
* * * ** * * * *
155055 TTT-GTTGTCACAAGAAAAGCATTTCTTCCAACTGCTTTTGATAGAA-TCAAAGTTTGT-CTCTT
63 TTTGGTT-TCATAAAAAAAGCATTTCTTCCCACTAATTTCGGTA-AAGTCAAAGTTCGTGC-CTC
* * *
155117 AAATAAGACAAACATGAATAGTCACAGAAAT--CCT-C
125 AAATAAGACAAACATGGAT--TCACAGTAATGGTCTCC
* * * * *
155152 ATT-ATTTTTTGGATTAGGCACTATAAACATAGTCTTCTCATAAGCATACACGAGATTGATGGTT
1 ATTCATTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATACACGATATTGATGGTT
* ** *
155216 TGGTTTCATAAAAAAAGGC-TTTCTTCCCACAAATTTCGGTAAAGTGTAAGTTCGTGCCTCAATT
65 TGGTTTCATAAAAAAA-GCATTTCTTCCCACTAATTTCGGTAAAGTCAAAGTTCGTGCCTCAAAT
** * *
155280 GTGATAAACATGGATTC-CAGTAATGGTTTCC
129 AAGACAAACATGGATTCACAGTAATGGTCTCC
* * *
155311 ATTCATTTTGTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAACGATATTGATGATTT
1 ATTCATTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATACACGATATTGATG-GTT
** ** * * * ** * * * *
155376 TCTTTTGCAT--GGAAATC-TTCTCTTTGCC-CTATTTTCCTTAAAATCAAA-TTCATCCCTTAA
65 TGGTTT-CATAAAAAAAGCATT-TC-TTCCCACTAATTTCGGTAAAGTCAAAGTTCGTGCCTCAA
* * * * *
155436 ATAAGGCAAGCATTGATTCTCA-TAATAGTCTCC
127 ATAAGACAAACATGGATTCACAGTAATGGTCTCC
* *** * * * * * * * *
155469 ACTC-TTTTCAACATTAGGAACCAAAAACACATTCCTT-TCATTAGGATACGCAACATTGATGCT
1 ATTCATTTT-GTGATTAGGCACTATAAACATATT-CTTCTCATTAGGATACACGATATTGATGGT
* * ** * * *** * * *
155532 TTGATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAA-TCAAAGTTCGT-CTCTTAA
64 TTGGTTTCATAAAAAAAGCATTTCTTCCCACTAATTTCGGTA-AAGTCAAAGTTCGTGC-CTCAA
* ** *
155595 ATAAGACAAGCAT-GATTAGTCACACAAAT--CCT-C
127 ATAAGACAAACATGGA-T--TCACAGTAATGGTCTCC
* * * * * * *
155628 ATTC-TTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGAAGCTT
1 ATTCATTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATACACGATATTGATGGTT
** ** * * ** * * * *
155692 TGGTTTCGCAAGGAAGGC-TTTCTTCCCACCAATTTTAGTAAAGTCCATGTTCATGCCTCAAATG
65 TGGTTTCATAAAAAAAGCATTTCTTCCCACTAATTTCGGTAAAGTCAAAGTTCGTGCCTCAAATA
* ** * *
155756 TGACAAACATGGATT-GTAGTAATGATCTTC
130 AGACAAACATGGATTCACAGTAATGGTCTCC
** * * * * * * * * *
155786 ATTCACATTGTGATTAGGAAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTT
1 ATTCATTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATACACGATATTGATG-GTT
** ** * * * * ** * * * *
155851 TTTTTTGCAT--GGAAATCTTTTCTTTGCC-CTATTTTCCTTAAAATCAAAGTTCATTCCTTAAA
65 TGGTTT-CATAAAAAAAGCATTTC-TTCCCACTAATTTCGGTAAAGTCAAAGTTCGTGCCTCAAA
* * * * ** *
155913 TAAGGCAAGCGTTGATTCTTA-TAATAGTCTCC
128 TAAGACAAACATGGATTCACAGTAATGGTCTCC
* ** * * * ** * * * * *
155945 ACTC-TTTTCAAGATTGGGAACTAAAAACGCATTCTTTTCAATAGGATACGCGACATTGATGCTT
1 ATTCATTTT-GTGATTAGGCACTATAAACATATTCTTCTCATTAGGATACACGATATTGATGGTT
* ** * * * * * * * * *
156009 T-ATTGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAA-TCAAAGTTTGT-CTCTTAA
65 TGGTT-TCATAAAAAAAGCATTTCTTCCCACTAATTTCGGTA-AAGTCAAAGTTCGTGC-CTCAA
* * * * *
156071 ATAAGATAAACAAGAATAGTCACAGAAAT--CCT-C
127 ATAAGACAAACATGGAT--TCACAGTAATGGTCTCC
* * * * * *
156104 ATTC-TTTTTTGGATTAGGCACTATAAACGTAATCTTCTCATAAGCATACGCGATATTGATGGTT
1 ATTCATTTTGT-GATTAGGCACTATAAACATATTCTTCTCATTAGGATACACGATATTGATGGTT
* * * * ** *
156168 TGATTTCATAAGAAAGGCA-TTCTTCCCACTAATTTCGATAAAGTGTAAGTTCGTGCCTCAATTA
65 TGGTTTCATAAAAAAAGCATTTCTTCCCACTAATTTCGGTAAAGTCAAAGTTCGTGCCTCAAATA
* * * *
156232 TGACAAACATGGATTC-TAGTAATGCTCTTC
130 AGACAAACATGGATTCACAGTAATGGTCTCC
* * * *
156262 ATTCATTTTGTGATTAGGCACTATAAGCGTATTCTTCTCATTAGGATAAATGATATTGATG
1 ATTCATTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATACACGATATTGATG
156323 ATTTTCTTTT
Statistics
Matches: 1070, Mismatches: 343, Indels: 151
0.68 0.22 0.10
Matches are distributed among these distances:
155 9 0.01
156 10 0.01
157 34 0.03
158 353 0.33
159 590 0.55
160 51 0.05
161 13 0.01
162 10 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (160 bp):
ATTCATTTTGTGATTAGGCACTATAAACATATTCTTCTCATTAGGATACACGATATTGATGGTTT
GGTTTCATAAAAAAAGCATTTCTTCCCACTAATTTCGGTAAAGTCAAAGTTCGTGCCTCAAATAA
GACAAACATGGATTCACAGTAATGGTCTCC
Found at i:155573 original size:476 final size:476
Alignment explanation
Indices: 153895--159629 Score: 7542
Period size: 476 Copynumber: 12.0 Consensus size: 476
153885 GGTGTCTACA
* ** * * *
153895 GTGATTAGGCGCTATAAACAAAGTCTCCTTATTAGGATAAATGAAATTGATGATTTTCTTTTGCA
1 GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
153960 TGGAAATCTTTTCTTTGCCCTATTTTTCTTAAAATCAAA-TTCA-TCCTTTAAATAAGGCAA-CG
66 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCC-TTAAATAAGGCAAGCA
* *
154022 TTGATTCTCGTAACAGTCTCCACTCTTTTC-AGCATTGGGAACCAAAAACACATTCCTTTCATTA
130 TTGATTCTCATAACAGTCTCCACTCTTTTCAAG-ATTGGGAACCAAAAACACATTCCTTTCAATA
*** * *** * * *
154086 GGATATATGACATTGACGCTTTGGTGTAAAAAAAAAAACGTTTCTTTCAACCGTTTTTGATAGAA
194 GGATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA
* * * * * * *
154151 TCAAAGTTTGTTTCTAAAATAAGACAAACATGAATTGTCATACTAATCCTCATTCTTTTTAGGTT
259 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGAT
* * * * * *
154216 TAGGCACCATAAACTTAGTGTTGTCATAAGGATACACGATATTGAAGCTTTGGTTTCGTAAAAAA
324 TAGGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAA
* * * *
154281 GGCTTTCTTCCCACCGATTTTGGTAAAGTCTATGTTCATGCCTCAAATGTGACAAACATGGATTG
389 GGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGTGACAAACATGGATTC
*
154346 TAGTAATGATCTTCATTCACATT
454 TAGTAATGATCTTCATTCACTTT
* * * *
154369 GTCATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
1 GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
154434 TGGAAATCTTTTCTTTGCACTATTTTCCTTAAAATCAAAGTTCAATCCTTAAATAAGGCAAGCAT
66 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAT
* * * ** * * *
154499 TGATTCTCATAAGAATCTCCACTTTTTTTGAGTTTAGGAACCAAAGACACATTCCTTTCAATAGG
131 TGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAGG
* * * *
154564 AAACGTGACATTGACGCTTTAATGTTGCAAG-AAAGCATTTCTTTCAACCGTTTTTGATA-ATAT
196 ATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGA-AT
* * * * *
154627 CAAAGTTTGTCTCTCAAATAAGACAAACATGAATAGTCACAAAAATCTTTATTC-TTTTTGGATA
260 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATT
* *
154691 AGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCATAATAAAG
325 AGGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAAG
* * *
154756 GCTTTCTTCCCACCAATTTCGGTAAAGTGTAAGTTCGTGCCTCAAGTGTGACAAACATGGATTCT
390 GCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGTGACAAACATGGATTCT
* *
154821 AGTAATGGT-TTCCATTCATTTT
455 AGTAATGATCTT-CATTCACTTT
* * *
154843 GTGATTAGGCACTATAAA-TGTATTCTTCTCAATAGGATAAATGATATTGATGATTTTCTTTTGT
1 GTGATTAGGCACTATAAACT-TATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * *
154907 AGGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAATTTAATTCCTTAAATAAGGCAAGCA
65 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCA
* * * * * * *
154972 TTGATTCTCGTAATAGTCTCCACTCTTTTCGAGATTAGGCACCCAAAACACATTCCTTTCATTAG
130 TTGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAG
* * * * * * *
155037 GATACGCAACATTGATGCTTTGTTGTCACAAGAAAAGCATTTCTTCCAACTGCTTTTGATAGAAT
195 GATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAAT
* *
155102 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACAGAAATCCTCATTATTTTTTGGATT
260 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATT
* * * * *
155167 AGGCACTATAAACATAGTCTTCTCATAAGCATACACGAGATTGATGGTTTGGTTTCATAAAAAAA
325 AGGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCAT-AAGAAA
* * * * *
155232 GGCTTTCTTCCCACAAATTTCGGTAAAGTGTAAGTTCGTGCCTCAATTGTGATAAACATGGATTC
389 GGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGTGACAAACATGGATTC
* * *
155297 CAGTAATGGT-TTCCATTCATTTT
454 TAGTAATGATCTT-CATTCACTTT
* * *
155320 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAACGATATTGATGATTTTCTTTTGCA
1 GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
155385 TGGAAATCTTCTCTTTGCCCTATTTTCCTTAAAATCAAA-TTCATCCCTTAAATAAGGCAAGCAT
66 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAT
* * * *
155449 TGATTCTCATAATAGTCTCCACTCTTTTCAACATTAGGAACCAAAAACACATTCCTTTCATTAGG
131 TGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAGG
* * *
155514 ATACGCAACATTGATGCTTTGATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATC
196 ATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATC
* * *
155579 AAAGTTCGTCTCTTAAATAAGACAAGCATGATTAGTCACACAAATCCTCATTCTTTTTTGGATTA
261 AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTA
* * ** *
155644 GGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGAAGCTTTGGTTTCGCAAGGAAGG
326 GGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAAGG
* * * * *
155709 CTTTCTTCCCACCAATTTTAGTAAAGTCCATGTTCATGCCTCAAATGTGACAAACATGGATTGTA
391 CTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGTGACAAACATGGATTCTA
*
155774 GTAATGATCTTCATTCACATT
456 GTAATGATCTTCATTCACTTT
* * * * *
155795 GTGATTAGGAAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTTTTTTGCA
1 GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
155860 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCGT
66 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAT
* * * * *
155925 TGATTCTTATAATAGTCTCCACTCTTTTCAAGATTGGGAACTAAAAACGCATTCTTTTCAATAGG
131 TGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAGG
* *
155990 ATACGCGACATTGATGCTTT-ATTGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAAT
196 ATACGCGACATTGACGCTTTGA-TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAAT
* * *
156054 CAAAGTTTGTCTCTTAAATAAGATAAACAAGAATAGTCACAGAAATCCTCATTCTTTTTTGGATT
260 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATT
* * * * * *
156119 AGGCACTATAAACGTAATCTTCTCATAAGCATACGCGATATTGATGGTTTGATTTCATAAGAAAG
325 AGGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAAG
* * * * * * *
156184 GCATTCTTCCCACTAATTTCGATAAAGTGTAAGTTCGTGCCTCAATTATGACAAACATGGATTCT
390 GCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGTGACAAACATGGATTCT
* *
156249 AGTAATGCTCTTCATTCATTTT
455 AGTAATGATCTTCATTCACTTT
* * *
156271 GTGATTAGGCACTATAAGCGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
1 GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* * *
156336 AGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAATTTAATTCCTTAAATAAGGCAAGCAT
66 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAT
* * * *
156401 TGATTCTCATAACACTCTCCACTCTTTTCAACATTGGGAACCAAAAACAAATTCCTTTCATTACG
131 TGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATA-G
* * * * * *
156466 GTATA--TGACATTGACGCTTTGGTGTCGTAAAAAAAGTATTTCTTTCAACCGTTTTTGACAGAA
195 G-ATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA
** * *
156529 TCAACA-TTCATCTCTTAAATAAGACAAACATGATTAGTCAAACAAATCCTCATTCTTTTTTGGA
259 TCAA-AGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGA
* * **
156593 TTAGGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGAAGCTTTGGTTTTGCA-GGG
323 TTAGGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGG-TTT-CATAAG
* * * *
156657 AAA-GCTTTCTTTCCACCAATTTTAGTAAAGTCTACA-TTCATGCCTCAAATGTGACAAACATAG
386 AAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTA-AGTTCGTGCCTCAAATGTGACAAACATGG
* * *
156720 ATTGTTGTAATGATCTTCATTCACATT
450 ATTCTAGTAATGATCTTCATTCACTTT
* * * *
156747 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAAGATAAATGATATGGATGATTTTCTTTTGCA
1 GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
156812 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAT
66 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAT
**
156877 TGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACC-AAAATGCATTCCTTTCAATAGG
131 TGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAGG
* * * * *
156941 ATACACGACATTGACGCTTTAATATCGCAAGAAAAGCATTTCTTTCAACTGTTTTTGATAAAATC
196 ATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATC
* * * * *
157006 AAAATTTATCTCTTAAATAAGACAAACATGAATAGTCGCAGAAATCCTCATTCTTTTTTGGATAA
261 AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTA
* * * * * *
157071 GGCACTATAAACATAGTCTTCTCATAAGCAGACATGATATTTATGGTTTGGTTTCATAAGAAAGG
326 GGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAAGG
* *
157136 CTTTCTTCCCACCAATTTTGGTAAAGTGTAAGTTCGTGCCTCAATTGTGACAAACATGGATTCTA
391 CTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGTGACAAACATGGATTCTA
* *
157201 GTAATGGT-TTCCATTCATTTT
456 GTAATGATCTT-CATTCACTTT
* *
157222 GTGATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
1 GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* * * *
157287 TGGAAATCTTTTCTTTGCCCAATTTTCCATAAAATCAAATTTAATTCCTTAAATAAGGCAAGCAT
66 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAT
* * * *
157352 TGATTCTCGTAACAATCTCCACTCTTTTCGAGACTGGGAACC-AAAACACATTCCTTTCAATAGG
131 TGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAGG
* * *
157416 ATATGTGACATTGACGCTTTGATGTTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATC
196 ATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATC
*
157481 AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATACTCATTCTTTTTTGGATTA
261 AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTA
157546 GGCACCATAAACTTAGTCTTCTCATAAGCATAAACTTAGTCTTCTCATAAGCATACATGATATTG
326 GGCACCATAAACTTAGTCTTCTCATAAG----------G-------AT-A-C--AC--GATATTG
* * *
157611 ATGGTTTGGTTTCGTAAGAAA-GCTTTTTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTC
368 ATGGTTTGGTTTCATAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTC
* * *
157675 AAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCGCGTT
433 AAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACTTT
* * * * * * *
157719 GTGATTGGGCAATATAAGCTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTGTTTTGCT
1 GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* *
157784 TGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATCAAAGTTAATTCCTTAAATAAGGCAAGCAT
66 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAT
* * * * * *
157849 TGATTCTCGTAACAGTCTCCACTCCTTTCGAGATTGAGAACCAAAAACATATTCTTTTCAATAGG
131 TGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAGG
* * * *
157914 ATACGCGACATTGACACTTTGATGTCGCAAGAAAAGCATTTCTTCCAATCATTTTTGATAGAATC
196 ATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATC
* * *
157979 AAAG--TGTCTCTTAAATAAGACAAACATGAGTAGTCACACTAATCCTCATTC-TTTTT-CATTG
261 AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGA-T-
* * * *
158040 TAGGCAACATAAACTTAGTCTTCTCATTAGGATACACGATATTGATGGTTTGGTTCCGTAAGAAA
324 TAGGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAA
* * * *
158105 GGCTTTCTTCCTACCAATTTTGGTAAAGTGTAACTTCGTGCCTCAATTGTGACAAACATGGATTC
389 GGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGTGACAAACATGGATTC
*
158170 TAGTAAT-AGTCTTCATTCATTTT
454 TAGTAATGA-TCTTCATTCACTTT
* * *
158193 GTAATTAGGCACTATAAACGTATTCTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
1 GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
* * *
158258 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATC-AATTTCATCCCTTAAATAAGGCAAGCAC
66 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAT
* * * *
158322 TGATTCTCGTAATAGTCTCCACTCTTTTCAACATTGGGAACCAAAAACACATTCCTTTCATTAGG
131 TGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAGG
*** * * * * *
158387 ATATATGACATTGACGCTTTGGTGTCGTAAAAAAAGCATTTCTTTCAATCGTTTTTGACAGAATC
196 ATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATC
* * * * * * * * *
158452 AAAGTTTGTCTCTAAAACAAGACAAATATGAATTGTCATACTAATCTTTATTCTTTTTAGGATTA
261 AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTA
* * *
158517 GGCACCATAAACTTAGTTTTCTCATAAGGATACACGATATTGAAGCTTTGGTTTCATAAGAAAGG
326 GGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAAGG
* * * * *
158582 CTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCCTGCCTCAAATATGACGAACATGGATTGTA
391 CTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGTGACAAACATGGATTCTA
*
158647 GTAATGATCTTCATTCACGTT
456 GTAATGATCTTCATTCACTTT
* *
158668 GTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGAT-TTGGATGATTTTCTTTTGC
1 GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATT-GATGATTTTCTTTTGC
* * *
158732 ATGGAAATCTTTTCTTTGCACTATTTTCTTTAATATCAAAGTTCATTCCTTAAATAAGGCAAGCA
65 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCA
* ** *
158797 TTGATTCTCATAACAATCTCCACTCTTTTCGGGATTGGGAACCAGAAACACATTCCTTTCAATAG
130 TTGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAG
* * *
158862 GATACGCGACATTGATGCTTTAATG-CTGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAAAA
195 GATACGCGACATTGACGCTTTGATGTC-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA
* * * * * * *
158926 TCAAAGTTTGTCCCTCAAATAAGAGAAACATGAATAGTCAGAAAAATCCTTATTCTTTTTAGGAT
259 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGAT
* * * * * *
158991 TAGGCACCATAAACATAGTTTTCCCATAAGGATACATGATATTGAAGCTTTGGTTTCATAAGAAA
324 TAGGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAA
* * * * *
159056 GGCTTTCTTCCCACCAATTTTGGCAAAGTCTATGTTCATGCCTCAAATGTGACAAACGTGGATTG
389 GGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGTGACAAACATGGATTC
* *
159121 TAGTAATGGTCTTCATTCACATT
454 TAGTAATGATCTTCATTCACTTT
* * * * *
159144 ATGATTAGGTAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
1 GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
*
159209 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATTCCTTAAATAAGGCAAGCAT
66 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAT
* * * * * *
159274 TGATTCTCGTAACAGTCTCCACTCCTTTCGAGATTGAGAACCAAAAACATAATCCTTTCAATAGG
131 TGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAGG
* * *
159339 ATATGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTCCAATCGTTTTTGATAGAATC
196 ATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATC
* * **
159404 AAAG--TG--TCTTAAATAAGACAAACATGAGTAGTCACACTAATCCTCATTCTTTTTCAGATTA
261 AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTA
* * * *
159465 AGCACCGTAAACTTAGTCTTCTCATTAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGG
326 GGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAAGG
* * * * * *
159530 CTTTCTTCCTACCAATTTTGGTAAAGTGTAAGTTCATTCCTCAATTGTGACAAGCATGGATTCTA
391 CTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGTGACAAACATGGATTCTA
* *
159595 GTAATGCTCTTCATTCATTTT
456 GTAATGATCTTCATTCACTTT
159616 GTGATTAGGCACTA
1 GTGATTAGGCACTA
159630 CAAATGATGA
Statistics
Matches: 4615, Mismatches: 578, Indels: 138
0.87 0.11 0.03
Matches are distributed among these distances:
472 185 0.04
473 176 0.04
474 608 0.13
475 1160 0.25
476 1851 0.40
477 203 0.04
478 6 0.00
479 2 0.00
486 1 0.00
492 1 0.00
493 1 0.00
494 2 0.00
495 6 0.00
496 73 0.02
497 230 0.05
498 110 0.02
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (476 bp):
GTGATTAGGCACTATAAACTTATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCA
TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCAT
TGATTCTCATAACAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAGG
ATACGCGACATTGACGCTTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATC
AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTA
GGCACCATAAACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAAGG
CTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGTGACAAACATGGATTCTA
GTAATGATCTTCATTCACTTT
Found at i:157581 original size:23 final size:23
Alignment explanation
Indices: 157551--157600 Score: 100
Period size: 23 Copynumber: 2.2 Consensus size: 23
157541 GATTAGGCAC
157551 CATAAACTTAGTCTTCTCATAAG
1 CATAAACTTAGTCTTCTCATAAG
157574 CATAAACTTAGTCTTCTCATAAG
1 CATAAACTTAGTCTTCTCATAAG
157597 CATA
1 CATA
157601 CATGATATTG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
23 27 1.00
ACGTcount: A:0.36, C:0.22, G:0.08, T:0.34
Consensus pattern (23 bp):
CATAAACTTAGTCTTCTCATAAG
Found at i:165329 original size:18 final size:18
Alignment explanation
Indices: 165308--165378 Score: 52
Period size: 18 Copynumber: 3.6 Consensus size: 18
165298 CCTGTCATCC
165308 CTCCTCTCTCTATTATCT
1 CTCCTCTCTCTATTATCT
*
165326 CTCCTGTCTCTCCTCTTATCAT
1 CTCC--TCTCT-CTATTATC-T
* *
165348 CCCTCCTATCTCTACTATCT
1 --CTCCTCTCTCTATTATCT
*
165368 CTCCTGTCTCT
1 CTCCTCTCTCT
165379 CCTCCTATCA
Statistics
Matches: 42, Mismatches: 5, Indels: 12
0.71 0.08 0.20
Matches are distributed among these distances:
18 14 0.33
20 6 0.14
21 13 0.31
22 5 0.12
24 4 0.10
ACGTcount: A:0.10, C:0.42, G:0.03, T:0.45
Consensus pattern (18 bp):
CTCCTCTCTCTATTATCT
Found at i:165348 original size:42 final size:42
Alignment explanation
Indices: 165293--165411 Score: 184
Period size: 42 Copynumber: 2.8 Consensus size: 42
165283 TTCTTCTCTC
* *
165293 CTCCTCCTGTCATCCCTCCTCTCTCTATTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
* *
165335 CTCCTCTTATCATCCCTCCTATCTCTACTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
* *
165377 CTCCTCCTATCATCCCTCCTCTCTCTTCTTTCTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCT
165412 TTGAGGGCTA
Statistics
Matches: 69, Mismatches: 8, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
42 69 1.00
ACGTcount: A:0.08, C:0.45, G:0.03, T:0.44
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
Found at i:165359 original size:24 final size:23
Alignment explanation
Indices: 165311--165402 Score: 79
Period size: 24 Copynumber: 4.2 Consensus size: 23
165301 GTCATCCCTC
* *
165311 CTCT-CTCTATTATCTCTCCTGT
1 CTCTCCTCTATCATCCCTCCTGT
*
165333 CTCTCCTCTTATCATCCCTCCTAT
1 CTCTCCTC-TATCATCCCTCCTGT
*
165357 CTCT--ACTATC-T--CTCCTGT
1 CTCTCCTCTATCATCCCTCCTGT
*
165375 CTCTCCTCCTATCATCCCTCCTCT
1 CTCTCCT-CTATCATCCCTCCTGT
165399 CTCT
1 CTCT
165403 TCTTTCTCTT
Statistics
Matches: 55, Mismatches: 7, Indels: 14
0.72 0.09 0.18
Matches are distributed among these distances:
18 10 0.18
20 1 0.02
21 9 0.16
22 6 0.11
23 3 0.05
24 26 0.47
ACGTcount: A:0.10, C:0.45, G:0.02, T:0.43
Consensus pattern (23 bp):
CTCTCCTCTATCATCCCTCCTGT
Found at i:168012 original size:476 final size:475
Alignment explanation
Indices: 167023--183073 Score: 21153
Period size: 475 Copynumber: 33.8 Consensus size: 475
167013 GTTTTCATCA
* * * * *
167023 ATAAACGTATTCTTCTCATTAGGATAAACGATATTGATGATTTTCTTTTGCATGGAAATCTTCTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* *
167088 TTTGCCCTATTTTCCTTAAAATGAAA-TTCATCCCTTAAATAAGGCAAGCATTGATTCTCATAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * * * * *
167152 AGTCTCCACTCTTTTCAACATTAGGAACCAAAAACACATTCTTTTCATTAGGATACGCAACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
* * * *
167217 ATGCTTTGATGTCGCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTCGTCTCT
196 ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
* * *
167282 TAAATAAGACAAACATGATTAGTCACACAAATCCTCATTCTTTTCTGGATTAGGCACCATAAACT
261 TAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACT
* * * * *
167347 TAGTCTTCTCATAAGGATACAAGATATTGAAGCTTTGGTTTCGCAAGGAAGGCTTTCTTCCCACC
326 TAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAA-GAAAGCTTTCTTCCCACC
* * * * * * *
167412 AATTTTAGTAAAGTCCATGTCCATGCCTCAAATGTGACAAACATAGATTGTTGTAATGATCTTCA
390 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
* *
167477 TTCACATTGTGATTAGGCAGT
455 TTCACGTTGTGATTAGGCACT
* *
167498 ATAAACTTATTCTCCTCCTTAAGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
167563 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* **
167628 AGTCTCCACTCTTTTCAAGATTGGGAACCAAAAATGCATTCCTTTCAATAGGATACGCGACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
** * *
167693 ACGCTTTGTTGTCACAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
196 ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
* * * * * * *
167758 TAAATAAGACAAACATGATTAGTGACACAAATCCTCATTCTCTTTTGGATTAGACACCACAAACA
261 TAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACT
* * *
167823 CAGTCTTCTCATAAGGATACACGATATTGAAGATTTGGTTTCGTAAGAAAGGCTTTCTTCCCACC
326 TAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCCCACC
* * * * * * * *
167888 AATTTCGGTAAAGTGT-TAGTTCATG-CTGCAATTATGACAAACATGGATTCTAGTAAAGGTATT
390 AATTTTGGTAAAGTCTAT-GTTCGTGCCT-CAAATGTGACAAACATGGATTCTAGTAATGATCTT
**
167951 CATTCATTTTGTGATTAGGCACT
453 CATTCACGTTGTGATTAGGCACT
* * *
167974 ATAAACATATTCTTCTCGTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * * * *
168039 TTTGCCCAATTTTCCTTAAAATCAAATTTAATTCCTTAAATAAGGTAAGCATTGATTCTCGTAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * * ** *
168104 AGTCTCCATTCTTTTC-AGGATTAGGAACAAAAAACACATTCCTTTCCTTAGGATACGCAACATT
131 AGTCTCCACTCTTTTCGA-GATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATT
* * * * *
168168 GATGCTTTGAGGTCGCAAGAAAAGCGTTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
195 GACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
* * * *
168233 TTAAATAAGACAAACTTGAGTAGTCACACTAGTCCTCATTCTTTTTCGGATTAGGCACCATAAAC
260 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
* *
168298 TTAGTCTTCCCATAAGGATACACGATATTGATGGTTTGGTTTCATAAGAAAGGCTTTCTTCCCAC
325 TTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCCCAC
* * * * * ** * *
168363 CAATTTTTGTAAAGTGTAAGTTCGTGCCTCAATTGTGATAAACACAGATTCTAGTAATGGTATTC
389 CAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTC
** *
168428 ATTCATTTTGTTATTAGGCACT
454 ATTCACGTTGTGATTAGGCACT
* * * **
168450 ATAAACGTATTCTTCTCATAAGGATAAATGATATTCATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * * * *
168515 TTTGCCTTATTTTCCTTAAAACCAAATTTAATTCCTTAAATAAGGCAAGCATTGATTCTCGTAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * * *
168580 AGTCTCCACTCTTTTTGAGGTTGGGAACCAGAAACACATTCCTTTCAATAGGATACGTGACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
* * * *
168645 AAGCTTTGATGTCGCAAGAATAGCATTTCTTTCAACCGTTTTTGATAGAATCATAGTTTGTCTCT
196 ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
* * ***
168710 TAAATAAGACAAATATGAGTAGTCACACTAATCCTCATTCTTTTTCAAATTAGGCACCATAAACT
261 TAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACT
* **
168775 TAGTCTTCTCATAAGGATACACGATATTGATGATTTGGTTTCAAAAGAAAGCTTTCTTCCCACCA
326 TAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCA
* *
168840 ATTTTGGTAAAGTCTATGTTCGTGCCTTAAATGTGACAAACATGGATTGTAGTAATGATCTTCAT
391 ATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCAT
168905 TCACGTTGTGATTAGGCACT
456 TCACGTTGTGATTAGGCACT
** * * * * * *
168925 ACGAACATATTCTCCTCATTATGATGAATGATATTGATGATTTTCATTTGCATGGAAATCTTTCC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* *** * * * *
168990 TTTGCCCTGTTTTCCACGACATCAGTA-TTC-TTCCCTTAAATAAGGCAAGCATTGATTCTCGTT
66 TTTGCCCTATTTTCCTTAAAATCA-AAGTTCATT-CCTTAAATAAGGCAAGCATTGATTCTCATA
* * * * ***
169053 ACAGTCTTCC-CTCTTTTCAAGATTTGGAACTAAAAACACATTCCTTTCAATAAGATATATGACA
129 ACAGTC-TCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACA
** * * * *
169117 TTGACGCTTTGGTGTCGCAAAAAAAGCATTTCTATCAACCGTTTTTGATAGTACCAAAGTTTGTC
193 TTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTC
* * * **
169182 TCTTAAATAAGATAAACGTGAATAGTCATACTAATCCTCATTCTTTTTTGGATTAGGTGCCATAA
258 TCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAA
* * * * *
169247 ACTTAGTCTTCTCATAATGATACACAATATTGATGCTTTGGTTTTGTAAGAAAGGCTTTTTTCCC
323 ACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCCC
* * *
169312 ACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAACGTGACAAACATGGATTGTAGTAATGATCC
387 ACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCT
*
169377 TCATTCACATTGTGATTAGGCACT
452 TCATTCACGTTGTGATTAGGCACT
** ** *
169401 ACGAACAGATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
** ** * *
169466 TTTGCCCCGTTTTCCACAACATCAATA-TTC-TTCCCTTAAATAAGGCAAGCATTGATTCTCGTA
66 TTTGCCCTATTTTCCTTAAAATCAA-AGTTCATT-CCTTAAATAAGGCAAGCATTGATTCTCATA
* * ***
169529 ACAGTCTTCC-CTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCAATAAGATATATGACA
129 ACAGTC-TCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACA
* ** * * * * *
169593 TTGATGCTTTGGTGTCACAA-AAAATGCATTTCTATCAACCGTTTTTGATCGTACCAAAGTTTGT
193 TTGACGCTTTAATGTCGCAAGAAAA-GCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGT
* * *
169657 CTCTTAAATAAGATAAACATGAATAGTCATACTAATCCTCATTCTTTTGTGGATTAGGCACCATA
257 CTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATA
* * * * *
169722 AACTTAGTCTTCTTATAATGATACACAATATTGATGCTTTGGTTTTGTAAGAAAGGCTTTCTTCC
322 AACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCC
* * * *
169787 CACCAATTTTAGTAAAGTCTATGTTCGTGCCTCAAACGTGACAAACATGGGTTGTAGTAATGATC
386 CACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATC
* *
169852 CTCATTCACATTGTGATTAGGCACT
451 TTCATTCACGTTGTGATTAGGCACT
** *** * * *
169877 ACGAAGAGATTCTCCTCATTAAGATAAATGATGTGGATGATTTTCTTTTGCATGGAAATATTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * *
169942 TTTGCCCTATTTTCCATAAAATCAACGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGTAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * * * *
170007 AATCTCCACTCTTTTCGAGATTAGGAACGAAAAACACATTCCTTTCATTAGTATACGCGACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
* * * * * *
170072 ATGCTTTAATGTTGCAAGGAAAGCATTTTTTTCAACCGGTTTTGATAGAATCAAAGTTTATCTCT
196 ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
* * * *
170137 AAAATAAGACAAACATGAATAGTCATACTAATGCTCATTCTTTTTAGGATTAGGCACCATAAACT
261 TAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACT
* *
170202 TAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCTACCA
326 TAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCA
* ** *
170267 ATTTTGGAAAAGTCTATG-TCTGTGCCTCAAATGTTCCAAACATGGATTCTAGTAATGATCTTTA
391 ATTTTGGTAAAGTCTATGTTC-GTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
* *
170331 TTCACGTTGTGATTAGGTAGT
455 TTCACGTTGTGATTAGGCACT
* * *
170352 ATAAACTTATTCTTCTCCTTAGGATAAATGATATGGGTGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * * *
170417 TTTGCCCTATGTTT-CTTAAAATCAAGGTTTATTCCTTAAATAAGGCAACCATTGATTCTCGTAA
66 TTTGCCCTAT-TTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
* * *
170481 CAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACAAATTCCTTTCAATAGGATACTCGACATT
130 CAGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATT
* * * *
170546 GATGCTTTAATGTCGTAAGAAAAGCATTTCTTTCAACCGATTTTGATAGAATCAAAGTTTGTGTC
195 GACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
* * * * * ** * *
170611 TTAAATAAGATAGATATGAATAGTCATACTAATCCTCATTCTTTTCTACATTCGGCGCCATAAAC
260 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
** ** * * *
170676 TTAGTCTTCTCATAACAATACATAATATTGATGATTTGGTTTTGTAAAAAAGCTTTCTTCCCACC
325 TTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACC
* *
170741 AATTTTGGTAAAGTCTATGTCCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCA
390 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
* *
170806 TTCACGTTGTGATTAGACATT
455 TTCACGTTGTGATTAGGCACT
* * *
170827 ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCTTGAAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * * *
170892 TTTGCCCTATTTTCCTTAAAATCAAATTTAATTCCTCAAATATA-GCAAGCATTGATTCTCGTAA
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATA-AGGCAAGCATTGATTCTCATAA
* * * ** * * ***
170956 CAGTCTCCACTCATTTCAACATTAAGAACCAAAAACACATTTCTTTCATTAGGATATATGACATT
130 CAGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATT
* * * * * *
171021 GATGCTTTGATGTCGTAAAAAAAGCATTTCTTTCAACCGTTTTTGATAGTATCAAATTTTGTCTC
195 GACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
* * * * *
171086 TAAAATAAGACAAACATGAATAGTTATACTAATCCTC-TTCCCTTTTAGGATTAGGCACCATAAA
260 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATT-CTTTTTTGGATTAGGCACCATAAA
* ** *
171150 CTTAGTCTTCTCATAATGATACACGATATTGATGCCTTGATTTCGTAAGAAAGGCTTTCTTCCCA
324 CTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCCCA
* * * * **
171215 CCAAGTTTGGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATAGTAGTAATGATCTT
388 CCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTT
*
171280 CATTCACATTGTGATTAGGCACT
453 CATTCACGTTGTGATTAGGCACT
** * * *
171303 ACGAACATATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATC-TTT-
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * *
171366 TTTGCCCTATTTTCCATGACATCAATA-TTC-TTCCCTTAAATAAGGCAAGCATTGATTCTCATA
66 TTTGCCCTATTTTCCTTAAAATCAA-AGTTCATT-CCTTAAATAAGGCAAGCATTGATTCTCATA
* * * * * ***
171429 ACAGTTTTCC-CTCTTTTCAAGATTGGGAACC-AAAACGACATTTCTTTCATTAAGATATATGAC
129 ACAG-TCTCCACTCTTTTCGAGATTGGGAACCAAAAAC-ACATTCCTTTCAATAGGATACGCGAC
* * *** * * * * *
171492 ATTTATGCTTTGGGGTTGCAAAAAAAGCATTTCTATCAACCGTTTTTGATAGTACCAAAGTTTGT
192 ATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGT
* * *
171557 CTCTTAAATAAGCCAAACATGAATAGTCATACTAATCCTCATTCTTTTTTGGATTTGGCACCATA
257 CTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATA
* * * *
171622 AACTTAGTCTTCTCATAATGATACATGATATTGATGCTTTGGTTTTGTAAGAAATGCTTTCTTCC
322 AACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCC
* * * * * *
171687 CACCGATTTTTGTAAAGTCTACGTTCGTGCCGCAAATGTGACAAACATGTATTCTAGTAATTATC
386 CACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATC
* * *
171752 ATCATTCACTTTGTGATTAGGCAGT
451 TTCATTCACGTTGTGATTAGGCACT
*
171777 ATAAACTTATTCT-CTTATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* *
171841 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAATGCAAGCATTGATTCTCGTAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* *
171906 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAATCACATTCCTTTCATTAGGATACGCGACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
* * * * *
171971 ACACTTTGATATCGCAAGAAAAGCATTTC-TTCGAACCGTTTTTGGTAGAATCAAAGTTTGCCTC
196 ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTC-AACCGTTTTTGATAGAATCAAAGTTTGTCTC
* * * * * *
172035 TAAAATAAGACAAACAAGAGTAGTCACACTAATCCTCATTCTTTTTAGGATTGGGCACCATAAAG
260 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
* * * * *
172100 TTAGTATTCTCACAAGGATACACGATATTGAAGCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCGC
325 TTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCCCAC
* * * * *
172165 CAGTTTTGGTAAAATTTATGTTCGTGCCTTAAATGTGACAAACATGGATTGTAGTAATGATCTTC
389 CAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTC
172230 ATTCACGTTGTGATTTA-GCACT
454 ATTCACGTTGTGA-TTAGGCACT
* * * *
172252 ATGAACATATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * *
172317 TTTG-CCTATTTTCCATAACATCAATA-TTC-TTCACTTAAATAAGGCAAGCATTGATTCTCGTA
66 TTTGCCCTATTTTCCTTAAAATCAA-AGTTCATTC-CTTAAATAAGGCAAGCATTGATTCTCATA
* * * * ***
172379 ACAGTCTCCACTTTTTTCAACATTGGGAACCAAAAACACATTCCTTTCATTAGGATA-TATAGCA
129 ACAGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGA-CA
* ** * *
172443 TTGGCGCTTTGGTGTC-CTAAAAAAAGCATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGT
193 TTGACGCTTTAATGTCGC-AAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGT
* * ** * * *
172507 CTCTAAAATAAGACAATCATGAGCAGTCATACTAATCCTCATTCTTTATAGGATTAGGCACCATA
257 CTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATA
* * * * ** * *
172572 AACTTAGTCTTCTCATAAGGACACACGATATTGAAGCTTTCGTTTCACAAGAAAGGGTTT-TTTC
322 AACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCC
* * *
172636 CACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGTTTATAGTAATAATC
386 CACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATC
172701 TTCATTCACGTTGTGATTAGGCACT
451 TTCATTCACGTTGTGATTAGGCACT
** * * * * *
172726 ACGAACATATTCTACTCATTATGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
*** * * * * *
172791 TTTGCCCTATTTTCCGCGACATCAATA-TTCCTCCCTTACATAAGGCAAGCATTGATTCTCATTA
66 TTTGCCCTATTTTCCTTAAAATCAA-AGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
* * * * ***
172855 CAGTCTTCC-CTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTCCATTAAGATATATGACAT
130 CAGTC-TCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACAT
** * * ** * * * *
172919 TGACGCTTTGGTGTCACAAAAAAAGCATTTCTACCAA-CGTTTTTTGAAAGTACCAAAGTTTGCC
194 TGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTC
* * * *
172983 TCTTAAATAAGACAAACATGAATAGTCATACTAATCTTCATTCTTTTTTGGTTTAAGCACCATAA
258 TCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAA
* * *
173048 ACTTAGTCTTCTCATAATGATACACGATATTGATGCTTTGGTTTTGTAAGAAATGCTTTCTTCCC
323 ACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCCC
* * * * *
173113 ACCGATTTTGGTAAAGTCTACGTTCGTCCCTCAAATGTAACAAACATGGATTCTAGTAATGATCA
387 ACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCT
* * *
173178 TCATTCACTTTGTGATTAGGGAGT
452 TCATTCACGTTGTGATTAGGCACT
* *
173202 ATAAACTTATTCTCCTCCTAAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * ** *
173267 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTCAAATAAGGCAAGCTTTGATTCTCGCAAT
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * **
173332 AGTCTCCACTCTTTTCAAGATTGCGAACCAAAAACACATTCCTTTCAATAGGATACATGACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
* *
173397 ACGCTTTAAGGTCGCATGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC-
196 ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
* *
173461 T---T---ACAAACAT-AATAGTCACACTAATCCTCATTCTTTTTTGGATTAGCCACCATAAGCT
261 TAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACT
* * *
173519 TAGTCTTCTCATAGGGATATATGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCA
326 TAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCA
* * *
173584 ATTTTGGTAAATTCTATGTTCGTGCCTCAAATGTGCCAAGCATGGATTCTAGTAATGATCTTCAT
391 ATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCAT
* *
173649 TCACGTTATGATTAGGCAGT
456 TCACGTTGTGATTAGGCACT
* * *
173669 ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTTTTTTGCATAGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * * *
173734 TTTGCCCTATTTTCCTTGATATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCT-TTAAT
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
*
173798 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
* * * * *
173863 AAAG-TTTAAGGTCGCAACAAAAGCATTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGACTC
196 -ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
* *
173927 TTAAATAAGATAAACAT-AATAGTCACACTAATCCTCATTCTTTTTTGGATTTGGCACCATAAAC
260 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
* * *
173991 TTAGTCTTCTCATAAGGATACGCGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCATCCTACC
325 TTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACC
* * *
174056 AATTTTGGTAAATTCTATGTTCATGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCA
390 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
* * *
174121 TTCACATTCTGATTAGGCAGT
455 TTCACGTTGTGATTAGGCACT
* *
174142 ATAAACTTATTC-CCATCCTTAGGATAAATGATATGGATGATTTTCTTTTTGCATGGAAATCTCT
1 ATAAACTTATTCTCC-TCATTAGGATAAATGATATGGATGATTTTC-TTTTGCATGGAAATCTTT
* * *
174206 TCTTTGCCCAATTTTCATTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCACA
64 TCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATA
* * * * *
174271 ACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAAAATATTCCTTTTAATAGGATACACGACA
129 ACAGTCTCCACTCTTTTCGAGATTGGGAACC-AAAAACACATTCCTTTCAATAGGATACGCGACA
* * * *
174336 TTGACGCTTTAATGTCACAAGAAAAGTATTTCTTTCAACCGTTTTTGATAAAATCAAGGTTTGTC
193 TTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTC
* * * * *
174401 TCTTAAATAAGATAAACATGAATAGTCACACAAATCATTATTCTTTTTTGGATTAGGCAACATAA
258 TCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAA
* * * * * *
174466 ACTTAGTCTTCTGATAAGCATACATGATATTAATGGTTTGGTTTTGTAAGAAAGCGTTCTTCCCA
323 ACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCA
*
174531 CCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTT
388 CCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTT
* * * *
174596 CATTAATGTTGGGATTAGGCATT
453 CATTCACGTTGTGATTAGGCACT
* * *
174619 ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTTTTTTGCATGGAAATCTTTCC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
*
174684 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAAGCAAGCATTGATTCTCATAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * *
174749 AATCTCCACTCTTTTCGAAATTGGGAACCAAAAACACATTCCTTTCAATAGGATATGCGACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
*
174814 AC-CGTTTAAGGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
196 ACGC-TTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
* * *
174878 TTAAATAAGACAAACATGAATAGTCACTCTAATCTTCATTCTTTTTTGGATTTGGCACCATAAAC
260 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
*
174943 TTAGTCTTCTCATAAGGATACACGATATTAATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACC
325 TTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACC
* * * * * * *
175008 AATTTTGGTGAAGCCTATATTCATGCCTCAAATGCGCCAAACATGGATTCTAGTGATGATCTTCA
390 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
*
175073 TTCACGTTGTGATTAGGCATT
455 TTCACGTTGTGATTAGGCACT
*
175094 ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* *
175159 TTTACCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCGTTGATTCTCATAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * * *
175224 AATCTCCACTCTTTCCGAGATTGGGAACCAAAAACATATTCCTTTCAATAAGATACGCGACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
* * *
175289 ACGGTTTAAGGTTC-CAAGAAAAGCATTTTTTTCAACCGTTTTTTGATAGAATCAAAGTTTGTCT
196 ACGCTTTAATG-TCGCAAGAAAAGCATTTCTTTCAACCG-TTTTTGATAGAATCAAAGTTTGTCT
*
175353 CTTAAATAAGACAAACATTAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAA
259 CTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAA
*
175418 CTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCAC
324 CTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCAC
* * * * * * *
175483 CAATTTCGGTAAAGTCTATGTTCATGCCTCAATTATGGCAAACATGGATTGTAGTAAGGATCTTC
389 CAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTC
* *
175548 ATTTACCTTGTGATTAGGCACT
454 ATTCACGTTGTGATTAGGCACT
** * *
175570 ATAAACGAAGTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * * *
175635 TTTGCCTTATTTTCCTTAAAATC-AATTTCATCCCTTAAATAAGGCAAGTATTGATTCTCATAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * * * * * **
175699 AGTCTCCAATCTTTT-GAACATTGGGAACAAAAAATACATTCCTTTCATTAGGATGCATGACATT
131 AGTCTCCACTCTTTTCG-AGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATT
* ** * * * *
175763 GATGCTTTGGTGTCGTAAAAAAAAAGCATTTCTTTCAACCGTTTTTGACAAAATCAAAGTTTGTC
195 GACGCTTTAATGTCG--CAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTC
* * *
175828 TCTAAAATAAGACAAAC------A-T---ACTAATCCTCATTC-TTTTTGGATTTGGCACTATAA
258 TCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAA
* * * * *
175882 ACTTAGTCTTCTGATAAGGATACGCGATATTGATGGTTTGGTTTTGTAATAAAGC-TTCCTCCCT
323 ACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCC-
* * * *
175946 ACCAATTTTTGTAAAGTCTATGTTCGTGCCTTAATTGTGACAAACATGGATTCTAGTAATGCTCT
387 ACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCT
* **
176011 TTATTCATTTTGTGATTAGGCACT
452 TCATTCACGTTGTGATTAGGCACT
* * *
176035 ATAAACGTT-TTCTTCTCATTAGGATAAATGATGTTGATGATTTTCTTTTGCATGGAAATCTTTT
1 ATAAAC-TTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTT
* * * * * * *
176099 CTTCGCCCTATTTTCCTTAAAATTAAATTTAATTCCTTCAATAAAGCAAGCATTGATTCTCGTAA
65 CTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
* * * * * * *
176164 CAGCCTCCACTCTTTTCGAGAGTGGGAACCAAAAACACATTCCTTTTATTAGGATATGCAATATT
130 CAGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATT
* * * *
176229 GATGCTTTGATGTCTCAAGAAAAGCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
195 GACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
* * * *
176294 TTAAATAAGACAAACATGAGTACTCACACTAATCCTCATTCTTTTTTGAATTACGCACCATAAAC
260 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
* * * *
176359 TTAGTCTTCTCATAAAGG-TACATGATATTGATGGTTTGGTTTCATAACAAAGGCTTTTTTCCCA
325 TTAGTCTTCTCAT-AAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCCCA
* ** * *
176423 CCAATTTTGGTAAAATCTGCGTTCGTGCCTCGAATGTGACAAACATGGATTCTAGTAATGATCAT
388 CCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTT
*
176488 CATTCACTTTGTGATTAGGCACT
453 CATTCACGTTGTGATTAGGCACT
** * * *
176511 ATAAACAAAATCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* *
176576 TTTGCCCTATTTTCCTTAAAATCAAA-TTCATCCCTTAAATAAGGCAAGCATTGATTCTCGTAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * * * * * * ***
176640 AATCTCCATTCTTTTCAACATTGGGAACCAAAAATACATTCCTTGCATTAGGATATATGACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
* ** * * * * *
176705 AAGCTTTGGTGTCGTAAAAAAAGCATTTCTTTCAACCGTTTTTGACAAAATCAAAGTTTGTCTAT
196 ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
* * * *
176770 AAAATAAG----AC-T--A-A--CATACTAATCCTCATTCTTTTTAGGATTTGGCACCATAAACT
261 TAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACT
* * * * *
176825 TAGTTTTCTTATAAGGATACACGATATTGAAGCTTTGGTTTCCTAAGAAACGCTTTCTTCCCACC
326 TAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCCCACC
*
176890 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTGTAGTAATGATCTTCA
390 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
*
176955 TTCACATTGTGATTAGGCACT
455 TTCACGTTGTGATTAGGCACT
* * * * *
176976 ATGAACATATTCTCCTCTTTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
*
177041 TTTGCCCTATTTTCCATT-ACATCAATA-TTC-TTCCCTTAAATAAGGCAAGCATTGATTCTCAT
66 TTTGCCCTATTTTCC-TTAAAATCAA-AGTTCATT-CCTTAAATAAGGCAAGCATTGATTCTCAT
* * * * * * * ***
177103 AACAGTCTTCC-CTCTTCTCAAGATTGGAAACCAAAAAGACATTTCTTTCATTAAGATATATGAC
128 AACAGTC-TCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGAC
* ** * * * * * * *
177167 ATTGATGCTTTGGTGTCACAAAAAAAGCATTTCTATCGACCCTTTTTGATAGCACCAAAGTTTGT
192 ATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGT
* * * * * *
177232 CTTTTAAATAAGACATACATGAATAGTCATACCAATCCTCATTCTTTTTTGGATTAGGTAGCATA
257 CTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATA
* * * * * *
177297 AACATAGTCTTTTCATAATGATACAGGATATTGATGCTTTGGTTTTGTAAGAAATGCTTTCTTCC
322 AACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAA-GCTTTCTTCC
* * **
177362 CACAAATTTTCGTAAAGTCTACATTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATC
386 CACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATC
* * * *
177427 ATCATTCACTTTATGATTAGGCAGT
451 TTCATTCACGTTGTGATTAGGCACT
* *
177452 ATAAACTTATTCT-CTTATTAGGATAAATGATATGGATGATTTTC-TTTACAAT-GAAATCTTTT
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGC-ATGGAAATCTTTT
* *
177514 CTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAACAAGGCAAGCATTGATTCTCGTAA
65 CTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
* * *
177579 CAGTCTCTACTCTTTTCGAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACGCGACATT
130 CAGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATT
* * * *
177644 GACGCTTTAATGTCGCATGAAAGGCATTTCTTCCAACCGTTTTTGATAGATTCAAAGTTTGTCTC
195 GACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
* * * * *
177709 TTGAATAAGACAAACACGAGTTGTCACACAAATCCTCATTCTTTTTTAGG-TTAGGCACCATAAA
260 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTT-GGATTAGGCACCATAAA
* * * * *
177773 CTTAGTCTTCTCATAAGCATACGCGATATTGATGGTTTGGATTCGTAAGAAAGCCTTCTTACCAC
324 CTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCAC
** *
177838 CAATTTTGGTAAAGTCTATGCCCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTC
389 CAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTC
* *
177903 ATTCACATTGTGATTAGGTAGC-
454 ATTCACGTTGTGATTAGGCA-CT
*
177925 ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
*
177990 TTTGCCATATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAA-GCAAGCATTGATTCTCATAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * ** * *
178054 AATCTCCACTCCTTAT-GAGATTGGGAACCAAAAACATGTTCCTTTCAAGAGGATACGTGACATT
131 AGTCTCCACT-CTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATT
* * * *
178118 GACTG-TTTAATGTCGCAAGAAAAGCATTTCTTTTAACCTTTTTTGATAGAATCAAAGTTCGACT
195 GAC-GCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCT
* * *
178182 CTTAAATAAGACAAACATGAACAATC-CTACTAATGCTCATTCTTTTTTGGATTAGGCACCATAA
259 CTTAAATAAGACAAACATGAATAGTCAC-ACTAATCCTCATTCTTTTTTGGATTAGGCACCATAA
* * * * *
178246 ACTTAGTCTTCTCGTAATGATACGCGATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCC
323 ACTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCA
* *
178311 CCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG-CTAAACATGGATTCTAGTAGTGATCG
388 CCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGAC-AAACATGGATTCTAGTAATGATCT
*
178375 TCATTCACGTTGTGATTAGGCAAT
452 TCATTCACGTTGTGATTAGGCACT
178399 ATAAACTTATTCTCCTTC-TTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTT
1 ATAAACTTATTCTCC-TCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTT
* * * *
178463 CTTTGCCTTACTCTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCGTTGATTCTCATAA
65 CTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
* * * *
178528 CAATCTTCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCGATAGGGTACGCGACATT
130 CAGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATT
* * * * *
178593 GACTG-TTTAATGTCACGAGAAAAGCATTTCTTTCAACTGTTTTTGATAGAATCTAAGTTCGTCT
195 GAC-GCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCT
* *
178657 CTTAAATAAGACAAACATGAACAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCAGCATAAA
259 CTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAA
* * ** * * *
178722 CTTAGTTTTCTCGTACTGATACACGATATCGGTGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCAC
324 CTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCAC
* * * * *
178787 CAATTTTGGTGAAGTCTACGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTC
389 CAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTC
*
178852 ATTCACGTTGTGATTAGGCAGT
454 ATTCACGTTGTGATTAGGCACT
* * *
178874 ATAAACTTATTCTCCCCTTTAGGATAAATGATATGGATGATTTTCTTTTGCTTGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * *
178939 TTTTCCCTACTTTCCTTAAAATCAAAGTTCATTCCATAAATAAGGCAAGCATTGATTCTCATAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* ** * * * * * * *
179004 AATCTCTGCTCTTTTCGAGATTAGGAACCACAAACAAATTCCATTCATTAGGATGCCCGACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
* * * * * * *
179069 ATGCTTTAATGTCGTATGAAAGGCATTTC-TTCTAACAGTTTTTGATAGAATCAAAGTATGCCTC
196 ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTC-AACCGTTTTTGATAGAATCAAAGTTTGTCTC
* * * *
179133 TTAAATAAGACAAAGATGAATAGTCATA-AAATTCCTCATTCTTTTTTGGATTAGGCACCGTAAA
260 TTAAATAAGACAAACATGAATAGTCACACTAA-TCCTCATTCTTTTTTGGATTAGGCACCATAAA
* * * * * *
179197 CTTAGTCTTCTCATAAGGATACACAATATTGATGGCTTGGTTTCGTCAGAAAGCTTCCTTCCAAG
324 CTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCAC
*
179262 CAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTC
389 CAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTC
* *
179327 ATTCACGTTGTGATTCGACAGC-
454 ATTCACGTTGTGATTAGGCA-CT
*
179349 ATAAACTTATTCTCCTCCA-TAGGATAAATGATATGGATGGTTTTCTTTTGCAT-GAAATCTTTT
1 ATAAACTTATTCTCCT-CATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTT
* * * *
179412 CTTTGCCCAATTTTCCTTATAATCAAAGTACATTCCTTAAATAAGGTAAGCATTGATTCTCATAA
65 CTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
* ** * * * * **
179477 CAATCTCTGCTCCTTTT-GAGATTTGGAACCCAAAACACATTCTTTTTAATAGGATACATGACAT
130 CAGTCTCCACT-CTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACAT
* * *
179541 TGACGCTTTAATGTCGAAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGCCT
194 TGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCT
* * *
179606 CTTAAATAAGACAAACATGAATAGTTACACAAATCCTCATTCTTTTTTGGATTAGACACCATAAA
259 CTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAA
* *
179671 CTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCATAAGAAAGCTTTCTTCCCAC
324 CTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCAC
* * *
179736 CAATTTTGGTAAAGTCTACGTTCGTGCCTCTAATGTGACAAACATGGATTCTAGTAATGATATTC
389 CAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTC
*
179801 ATTCACGTTGTGATTAGGCAGT
454 ATTCACGTTGTGATTAGGCACT
*
179823 ATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* *
179888 TTTGCCCTACTTTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
*
179953 AATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATA-GCGACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
* *
180017 ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTTAACCGTTTTTGATAGAATCAAGGTTTGTCTCT
196 ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
*
180082 TAAATAAGACAAACATGAATAGTCACA-TAAATCCTCATTCGTTTTTGGATTAGGCACCATAAAC
261 TAAATAAGACAAACATGAATAGTCACACT-AATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
* * *
180146 TTAGTCTTCTCATAAGCATACATGATATTGATGGCTTGGTTTCGTAAGAAAGCTTTCTTCCCACC
325 TTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACC
* * * *
180211 ATTTTTGGTAAAGTCTATGTTCGTTCCTCAAAAGTGACAAATATGGATTCTAGTAATGATCTTCA
390 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
*
180276 TTCACGTTGTGATTAGGCAGT
455 TTCACGTTGTGATTAGGCACT
* **
180297 ATAAACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTACCTTTTGCATGGAAATCTTTT
1 ATAAACTTATTCTCCTCATTAGGATAAATGATAT-GGATGATTTTCTTTTGCATGGAAATCTTTT
* *
180361 CTTTGCCCTATTTTCCTTAAAATCAAGGTTTATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
65 CTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
* * *
180426 CAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCTTTTCAATAGGATACACGACATT
130 CAGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATT
** * * *
180491 GACATTTTAATTTCGGAAGAAAAGCATTTCTTTCAACTGTTTTTGATAGAATCAAAGTTTGTCTC
195 GACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
* * *
180556 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTAGATTAGGCACCATAAAT
260 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
* * * * * *
180621 TTAGTCTTCTTATAAGCATACACGATATTGAAGCTTTAGCTTT-GTACGAAAGGCTTTCTTCCCA
325 TTAGTCTTCTCATAAGGATACACGATATTGATGGTTT-GGTTTCGTAAGAAA-GCTTTCTTCCCA
* *
180685 CCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTGC-AGTGATAATCT
388 CCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATT-CTAGTAATGATCT
180749 TCATTCACGTTGTGATTAGGCACT
452 TCATTCACGTTGTGATTAGGCACT
* * *
180773 ATGAACATATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * * * *
180838 TTTGCCCTATTTTCCATAACATCAATA-TTC-TTCCCCTAAAAAAGGCAAGCGTTGATTCTCATA
66 TTTGCCCTATTTTCCTTAAAATCAA-AGTTCATT-CCTTAAATAAGGCAAGCATTGATTCTCATA
* * * * * * ***
180901 ATAGTCTCCACTGTTTTCAACATTGGGAACCAAAAACACATTCCTTTTATTAGGATATATGACAT
129 ACAGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACAT
* ** ** * * * * * * * *
180966 TGATGCTTTGGTG-CTTAAAAAAAGCATTTTTTTTAGCAGTTTTTGATAGTACCAAAGTTTGCCT
194 TGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCT
* * *
181030 CTTAAATAAGACAAACAGGAGTAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCAAAAA
259 CTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAA
* * * *
181095 CTTAGTCTTCTCATAATGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGCTTTTCTTCCCA
324 CTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGC-TTTCTTCCCA
* *
181160 CCAATTTTGGTAAAGTCTATGTTCGTGCTTCAAATGTGACAAACATGGATTGTAGTAATGATCTT
388 CCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTT
* *
181225 CATTAACATTGTGATTAGGCACT
453 CATTCACGTTGTGATTAGGCACT
** * *
181248 ACGAACATATTCTCCTCATTAGGATAAATGATGTGGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * *
181313 TTTGCCCTATTTTCCTTAAAATCAAAGTTCAATCCTTAAATAAGGCAAGCACTGATTCTCGTAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * * * *
181378 AGTCTCCACTCTGTTCGAGGTTGGGAACCCAAAACATATTTCTTTC-ATAAGGATACGCGACATT
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAAT-AGGATACGCGACATT
**
181442 GACTG-TTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTCATCT
195 GAC-GCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCT
* * * * *
181506 CTTAAAGAAGACAAACATGAACAGTCACACTAATCCCCAATCTTTTTTGGATTAGGCACTATAAA
259 CTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAA
* * * * * *
181571 CTTAGTCTTCTCGTAATGATACATGATATTGATGGTTTGGTTTTGTAAGAAACCTTCCTTCCCAC
324 CTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCAC
* * * * * * *
181636 CAATTTTGGTAAAGTCTATGTTTGTGCCTCAAAAGTGCCAAACATGGATACTAGCAGTAATCTTC
389 CAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTC
*
181701 ATTCACGTTGTGATTAGGCAGT
454 ATTCACGTTGTGATTAGGCACT
* *
181723 ATAAAATTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
1 ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
* * * * * *
181788 TTTGCCCTACTTTACATAAAATCAAAGTTCGTTCCTTAAATAAGGCAAACATTGATTCTCACAAC
66 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * * *
181853 AATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTTCTTTCATTAGGATACGCAACATTG
131 AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
* * * * * *
181918 ACTG-TTTAATGTCGCATGAAAGGCATTTCTTCCAACCGTTTTTGATATAATCAAAGTCTGTCAC
196 AC-GCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
*
181982 TTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
260 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
* * *
182047 TTAGTCTTCTCATAAGCATACACGATAATGATGGTTTGGATTCGTAAGAAAGCTTTCTTCCCACC
325 TTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACC
* * *
182112 AATTTTGGTAAAGTTTATGTTCGTGCTTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCA
390 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
*
182177 TTCACGTTGTGATTAGGCAGT
455 TTCACGTTGTGATTAGGCACT
* * *
182198 ATAAACTTATTCTCCTCCTTAGCATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTT
1 ATAAACTTATTCTCCTCATTAGGATAAATGATAT-GGATGATTTTCTTTTGCATGGAAATCTTTT
*
182262 CTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
65 CTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
* * *
182327 CAATCTCCACTCTTTTCGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGTTACGCGACATT
130 CAGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATT
*
182392 GACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
195 GACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
*
182457 TTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
260 TTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
* * *
182522 TTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGCAAGAAAGCTTTCTTCCCACC
325 TTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACC
* *
182587 AATTTTGGAAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCA
390 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCA
* *
182652 TTCACATTGTGATTAGGCAGT
455 TTCACGTTGTGATTAGGCACT
* * *
182673 ATAAACTTATTCTCCTCCTTAGCATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTT
1 ATAAACTTATTCTCCTCATTAGGATAAATGATAT-GGATGATTTTCTTTTGCATGGAAATCTTTT
*
182737 CTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATA
65 CTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCT-CATA
* * * *
182802 ACAATCTCCACTCTTTTCAAGATTGGGAACCAAAAATACATTCCTTTCAATAGGGTACGCGACAT
129 ACAGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACAT
*
182867 TGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTC-
194 TGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCT
*
182931 CTTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAA
259 CTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAA
*
182996 CTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCAC
324 CTTAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCAC
183061 CAATTTTGGTAAA
389 CAATTTTGGTAAA
183074 TGTATAGGTG
Statistics
Matches: 13837, Mismatches: 1570, Indels: 338
0.88 0.10 0.02
Matches are distributed among these distances:
464 70 0.01
465 474 0.03
466 380 0.03
467 214 0.02
468 86 0.01
469 9 0.00
470 6 0.00
471 4 0.00
472 3 0.00
473 396 0.03
474 2200 0.16
475 5812 0.42
476 3926 0.28
477 255 0.02
478 2 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.36
Consensus pattern (475 bp):
ATAAACTTATTCTCCTCATTAGGATAAATGATATGGATGATTTTCTTTTGCATGGAAATCTTTTC
TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
AGTCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTG
ACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCT
TAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACT
TAGTCTTCTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCA
ATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCAT
TCACGTTGTGATTAGGCACT
Found at i:183404 original size:372 final size:373
Alignment explanation
Indices: 182697--183442 Score: 1273
Period size: 372 Copynumber: 2.0 Consensus size: 373
182687 CTCCTTAGCA
182697 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
182762 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
66 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
* * * *
182827 GGAACCAAAAATACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
131 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTAACGTTTTAATGTCGCAAGAAAAA
*
182892 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCCTTAAATAAGACAAACATGAATAGTC
196 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCCTTAAATAAGACAAACACGAATAGTC
*
182957 ACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGA
261 ACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGA
* *
183022 TATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGG
326 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
* *
183070 TAAATG-TATAGGTGATTTCCTTTTGCATGGGAATCTTTTCTTTGCCGTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * *
183134 AGGTTCGTTCCTTAAATAAGGCAAGCATTGATTGT-CATAACAATCTCCACTCTTTTCGAGATTG
66 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
* *
183198 GGAACCAAAAACACATTCCTTTCAATAGGATACGTGACATTAACGTTTTTATGTCGCAAGAAAAA
131 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTAACGTTTTAATGTCGCAAGAAAAA
* * *
183263 CATTTCTTTCAACCGTTTTTGATGGAATCAAAGTTTGTCTCTTAAATAAGACAAGCACGAATTGT
196 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTC-CTTAAATAAGACAAACACGAATAGT
* *
183328 CACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAG-ATACAT
260 CACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGCATACAC
183392 GATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
324 GATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
183442 T
1 T
183443 GAAGTCTACG
Statistics
Matches: 351, Mismatches: 20, Indels: 5
0.93 0.05 0.01
Matches are distributed among these distances:
371 125 0.36
372 218 0.62
373 8 0.02
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.35
Consensus pattern (373 bp):
TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTAACGTTTTAATGTCGCAAGAAAAA
CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCCTTAAATAAGACAAACACGAATAGTC
ACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGA
TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
Found at i:184428 original size:475 final size:475
Alignment explanation
Indices: 183535--195775 Score: 18297
Period size: 475 Copynumber: 25.8 Consensus size: 475
183525 CACCAATTTT
* *
183535 GGTGATTTCCTTTTGCATGGAAATCTTTTATTTGCCCTATTTTCCTTAAACTCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
183600 TTAAATATGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* * *
183665 ACATTCCTTTCAATAGGGTACGCGACATTGACATTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
* *
183730 CCGTTTTTGATGGAATCAAAGTTTTTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* *
183795 CATTCTTTTTTGGATTAGGCGCCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATGGTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* * * *
183860 TGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTTGTGCTTCAAATGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
*
183925 ACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
*
183990 TCCTTAGCATAAATGATATA
456 TCCTTAGGATAAATGATATA
*
184010 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCA
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
184075 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
** * *
184140 ACATTCTTTTCAATAGGATTTGCGACATTGACATTTTAATGTCACAAGAAAAGCATTTCTTTCAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
* *
184205 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATAGTCACAAAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* * *
184270 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAG-ATACATGATATCGATGGT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGCATACACGATATTGATGGT
* * * *
184334 TTGGCTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTGCCTCAAATGT
325 TTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGT
* * *
184399 GCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTC
390 GACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTC
184464 CTCCTTAGGATAAATGATATA
455 CTCCTTAGGATAAATGATATA
* *
184485 GGTGATTTCCTTTTACATGGAAATCTTTTATTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
184550 TTAAATATGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* * *
184615 ACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCACAAGAAAAGCATTTCTTTCAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
184680 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
*
184745 CATTCTTTTTTGGATTAGGCGCCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* *
184810 TGGTTTTGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAAGGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
184875 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
184940 TCCTTAGGATAAATGATATA
456 TCCTTAGGATAAATGATATA
*
184960 GGTGATTACCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
185025 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* * * *
185090 ACATTCTTTTCAATAGGATACACGACATTGACATTTTAATTTCGGAAGAAAAGCATTTCTTTCAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
* *
185155 CTGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* * * * * *
185220 CATTCTTTTCTAGATTAGGCACCATAAATTTAGTCTTCTTATAAGCATACACGATATTGAAGCTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* *
185285 TAGCTTT-GTACGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATG
326 T-GGTTTCGTAAGAAA-GCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATG
* * * * *
185349 TGACAAACATGGATTGC-AGTGATAATCTTCATTCACGTTGTGATTAGGCACTATGAACATATTC
389 TGACAAACATGGATT-CTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
* *
185413 TCCTCATTAGGATAAATGATATT
453 TCCTCCTTAGGATAAATGATATA
* * * * **
185436 GATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCATAACATCAATATTC-TTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATT-C
* * * * * * * *
185500 CCTAAAAAAGGCAAGCGTTGATTCTCATAATAGTCTCCACTGTTTTCAACATTGGGAACCAAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* *** * * ** ** *
185565 CACATTCCTTTT-ATTAGGATATATGACATTGATGCTTTGGTG-CTTAAAAAAAGCATTT-TTAT
130 CACATT-CTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTT-T
* * * * * * * * *
185627 TAGCAGTTTTTGATAGTACCAAAGTTTGCCTCTTAAATAAGACAAACAGGAGTAGTCACACTAAT
193 CAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAAT
* * *
185692 CCTCATTCTTTTTTGGATTAGGCACTATAAACTTAGTCTTCTCGTAATG-ATACATGATATTGAT
258 CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GCATACACGATATTGAT
* * * *
185756 GGTTTGGTTTTGTAAGAAACCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTTGTGCCTCAAA
322 GGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAA
* * * * * * *
185821 AGTGCCAAACATGGATACTAGCAGTAATCTTCATTCACGTTGTGATTAGGCAGTATAAAATTATT
387 TGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATT
185886 CTCCTCCTTAGGATAAATGATAT-
452 CTCCTCCTTAGGATAAATGATATA
* * * * * *
185909 GGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTACTTTACATAAAATCAAAGTTCGTTC
1 GG-TGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTC
* *
185974 CTTAAATAAGGCAAACATTGATTCTCACAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* * * * *
186039 CACATT-TCTTTCATTAGGATACGCAACATTGAC-TGTTTAATGTCGCATGAAAGGCATTTCTTC
130 CACATTCT-TTTCAATAGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAAGCATTTCTTT
* * * *
186102 CAACCGTTTTTGATATAATCAAAGTCTGTCACTTAAATAAGACAAACATGAATAATCACACAAAT
193 CAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAAT
*
186167 CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATG
258 CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATG
* * *
186232 GTTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTCGTGCTTCAAAT
323 GTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAAT
*
186297 GTGACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
388 GTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
*
186362 TCCTCCTTAGCATAAATGATATA
453 TCCTCCTTAGGATAAATGATATA
186385 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
186450 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAT
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* *
186515 ACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
186580 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
186645 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* * *
186710 TGGATTCGCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCATGCCTCAAATGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
*
186775 ACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
*
186840 TCCTTAGCATAAATGATATA
456 TCCTTAGGATAAATGATATA
186860 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
186925 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* * *
186990 ACATTCCTTTCAATAGGATA-GCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTTAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
*
187054 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACATAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* * *
187119 CATTCGTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGCT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* * *
187184 TGGTTTCGTAAGAAAGCTTTCTTCCCACCATTTTTGGTAAAGTCTATGTTCGTTCCTCAAAAGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
*
187249 ACAAATATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
187314 TCCTTAGGATAAATGATATA
456 TCCTTAGGATAAATGATATA
*
187334 GGTGATTACCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
187399 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* * * *
187464 ACATTCTTTTCAATAGGATACACGACATTGACATTTTAATTTCGGAAGAAAAGCATTTCTTTCAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
* *
187529 CTGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* * * * * *
187594 CATTCTTTTCTAGATTAGGCACCATAAATTTAGTCTTCTTATAAGCATACACGATATTGAAGCTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* *
187659 TAGCTTT-GTACGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATG
326 T-GGTTTCGTAAGAAA-GCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATG
* * * * *
187723 TGACAAACATGGATTGC-AGTGATAATCTTCATTCACGTTGTGATTAGGCACTATGAACATATTC
389 TGACAAACATGGATT-CTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
* *
187787 TCCTCATTAGGATAAATGATATT
453 TCCTCCTTAGGATAAATGATATA
* * * * **
187810 GATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCATAACATCAATATTC-TTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATT-C
* * * * * * * *
187874 CCTAAAAAAGGCAAGCGTTGATTCTCATAATAGTCTCCACTGTTTTCAACATTGGGAACCAAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* *** * * ** ** *
187939 CACATTCCTTTT-ATTAGGATATATGACATTGATGCTTTGGTG-CTTAAAAAAAGCATTT-TTAT
130 CACATT-CTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTT-T
* * * * * * * * *
188001 TAGCAGTTTTTGATAGTACCAAAGTTTGCCTCTTAAATAAGACAAACAGGAGTAGTCACACTAAT
193 CAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAAT
188066 CCTCATTCTTTTTTGGATTAGGCACCA-AAACCTTAGTCTTCTCATAATG-ATACACGATATTGA
258 CCTCATTCTTTTTTGGATTAGGCACCATAAA-CTTAGTCTTCTCATAA-GCATACACGATATTGA
* * * *
188129 TGCTTTGGTTTTGCAAGAAAGCTTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCTTCA
321 TGGTTTGGTTTCGTAAGAAAGC-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCA
* * * * ** *
188194 AATGTGACAAACATGGATTGTAGTAATGATCTTCATTAACATTGTGATTAGGCACTACGAACATA
385 AATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTA
* *
188259 TTCTCCTCATTAGGATAAATGATGT-
450 TTCTCCTCCTTAGGATAAATGATATA
* * *
188284 GGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCAATC
1 GG-TGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTC
* * * * * *
188349 CTTAAATAAGGCAAGCACTGATTCTCGTAACAGTCTCCACTCTGTTCGAGGTTGGGAACCCAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
*
188414 CATATT-TCTTTC-ATAAGGATACGCGACATTGAC-TGTTTAATGTCGCAAGAAAAGCATTTCTT
130 CACATTCT-TTTCAAT-AGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAAGCATTTCTT
** * * *
188476 TCAACCGTTTTTGATAGAATCAAAGTTCATCTCTTAAAGAAGACAAACATGAACAGTCACACTAA
192 TCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAA
* * * * *
188541 TCCCCAATCTTTTTTGGATTAGGCACTATAAACTTAGTCTTCTCGTAATG-ATACATGATATTGA
257 TCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GCATACACGATATTGA
* * * *
188605 TGGTTTGGTTTTGTAAGAAACCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTTGTGCCTCAA
321 TGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAA
* * * * * * *
188670 AAGTGCCAAACATGGATACTAGCAGTAATCTTCATTCACGTTGTGATTAGGCAGTATAAAATTAT
386 ATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTAT
188735 TCTCCTCCTTAGGATAAATGATAT-
451 TCTCCTCCTTAGGATAAATGATATA
* * * * * *
188759 GGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTACTTTACATAAAATCAAAGTTCGTTC
1 GG-TGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTC
* *
188824 CTTAAATAAGGCAAACATTGATTCTCACAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* * * * *
188889 CACATT-TCTTTCATTAGGATACGCAACATTGAC-TGTTTAATGTCGCATGAAAGGCATTTCTTC
130 CACATTCT-TTTCAATAGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAAGCATTTCTTT
* * * *
188952 CAACCGTTTTTGATATAATCAAAGTCTGTCACTTAAATAAGACAAACATGAATAATCACACAAAT
193 CAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAAT
* *
189017 CCTCATTCTTTTTTGCATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATG
258 CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATG
* * *
189082 GTTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTCGTGCTTCAAAT
323 GTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAAT
*
189147 GTGACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
388 GTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
*
189212 TCCTCCTTAGCATAAATGATATA
453 TCCTCCTTAGGATAAATGATATA
189235 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
189300 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAT
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* *
189365 ACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
189430 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
189495 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* *
189560 TGGATTCGCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
*
189625 ACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
*
189690 TCCTTAGCATAAATGATATA
456 TCCTTAGGATAAATGATATA
189710 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
189775 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* * * *
189840 ACATTCCTTTCAAAAGGATA-GCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTTAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
*
189904 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACATAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* * *
189969 CATTCGTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGCT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* * *
190034 TGGTTTCGTAAGAAAGCTTTCTTCCCACCATTTTTGGTAAAGTCTATGTTCGTTCCTCAAAAGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
*
190099 ACAAATATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
190164 TCCTTAGGATAAATGATATA
456 TCCTTAGGATAAATGATATA
*
190184 GGTGATTACCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
190249 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* * * *
190314 ACATTCTTTTCAATAGGATACACGACATTGACATTTTAATTTCGGAAGAAAAGCATTTCTTTCAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
* *
190379 CTGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* * * * * *
190444 CATTCTTTTCTAGATTAGGCACCATAAATTTAGTCTTCTTATAAGCATACACGATATTGAAGCTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* *
190509 TAGCTTT-GTACGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATG
326 T-GGTTTCGTAAGAAA-GCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATG
* * * * *
190573 TGACAAACATGGATTGC-AGTGATAATCTTCATTCACGTTGTGATTAGGCACTATGAACATATTC
389 TGACAAACATGGATT-CTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
* *
190637 TCCTCATTAGGATAAATGATATT
453 TCCTCCTTAGGATAAATGATATA
* * * * **
190660 GATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCATAACATCAATATTC-TTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATT-C
* * * * * * * *
190724 CCTAAAAAAGGCAAGCGTTGATTCTCATAATAGTCTCCACTGTTTTCAACATTGGGAACCAAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* *** * * ** ** *
190789 CACATTCCTTTT-ATTAGGATATATGACATTGATGCTTTGGTG-CTTAAAAAAAGCATTT-TTAT
130 CACATT-CTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTT-T
* * * * * * * * *
190851 TAGCAGTTTTTGATAGTACCAAAGTTTGCCTCTTAAATAAGACAAACAGGAGTAGTCACACTAAT
193 CAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAAT
190916 CCTCATTCTTTTTTGGATTAGGCACCA-AAACCTTAGTCTTCTCATAATG-ATACACGATATTGA
258 CCTCATTCTTTTTTGGATTAGGCACCATAAA-CTTAGTCTTCTCATAA-GCATACACGATATTGA
* * * *
190979 TGCTTTGGTTTTGCAAGAAAGCTTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCTTCA
321 TGGTTTGGTTTCGTAAGAAAGC-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCA
* * * * ** *
191044 AATGTGACAAACATGGATTGTAGTAATGATCTTCATTAACATTGTGATTAGGCACTACGAACATA
385 AATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTA
* *
191109 TTCTCCTCATTAGGATAAATGATGT-
450 TTCTCCTCCTTAGGATAAATGATATA
* * *
191134 GGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCAATC
1 GG-TGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTC
* * * * * *
191199 CTTAAATAAGGCAAGCACTGATTCTCGTAACAGTCTCCACTCTGTTCGAGGTTGGGAACCCAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
*
191264 CATATT-TCTTTC-ATAAGGATACGCGACATTGAC-TGTTTAATGTCGCAAGAAAAGCATTTCTT
130 CACATTCT-TTTCAAT-AGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAAGCATTTCTT
** * * *
191326 TCAACCGTTTTTGATAGAATCAAAGTTCATCTCTTAAAGAAGACAAACATGAACAGTCACACTAA
192 TCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAA
* * * * *
191391 TCCCCAATCTTTTTTGGATTAGGCACTATAAACTTAGTCTTCTCGTAATG-ATACATGATATTGA
257 TCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GCATACACGATATTGA
* * * *
191455 TGGTTTGGTTTTGTAAGAAACCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTTGTGCCTCAA
321 TGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAA
* * * * * * *
191520 AAGTGCCAAACATGGATACTAGCAGTAATCTTCATTCACGTTGTGATTAGGCAGTATAAAATTAT
386 ATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTAT
191585 TCTCCTCCTTAGGATAAATGATAT-
451 TCTCCTCCTTAGGATAAATGATATA
* * * * * *
191609 GGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTACTTTACATAAAATCAAAGTTCGTTC
1 GG-TGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTC
* *
191674 CTTAAATAAGGCAAACATTGATTCTCACAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* * * * * *
191739 CACATT-TCTTTCATTAGGATACGCAACATTGAC-TGTTTAATGTTGCATGAAAGGCATTTCTTC
130 CACATTCT-TTTCAATAGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAAGCATTTCTTT
* * * *
191802 CAACCGTTTTTGATATAATCAAAGTCTGTCACTTAAATAAGACAAACATGAATAATCACACAAAT
193 CAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAAT
* *
191867 CCTCATTCTTTTTTGCATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATG
258 CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATG
* * *
191932 GTTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTCGTGCTTCAAAT
323 GTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAAT
*
191997 GTGACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
388 GTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
*
192062 TCCTCCTTAGCATAAATGATATA
453 TCCTCCTTAGGATAAATGATATA
192085 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
192150 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAT
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* *
192215 ACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
192280 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
192345 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* *
192410 TGGATTCGCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
*
192475 ACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
*
192540 TCCTTAGCATAAATGATATA
456 TCCTTAGGATAAATGATATA
192560 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
192625 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* * *
192690 ACATTCCTTTCAATAGGATA-GCGACATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTTAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
*
192754 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACATAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* * *
192819 CATTCGTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGCT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* * *
192884 TGGTTTCGTAAGAAAGCTTTCTTCCCACCATTTTTGGTAAAGTCTATGTTCGTTCCTCAAAAGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
*
192949 ACAAATATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
193014 TCCTTAGGATAAATGATATA
456 TCCTTAGGATAAATGATATA
*
193034 GGTGATTACCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
193099 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
** * * *
193164 ACATTCTTTTCAATAGGATACATGACATTGACATTTTAATTTCGGAAGAAAAGCATTTCTTTCAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
* *
193229 CTGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* * * * * *
193294 CATTCTTTTCTAGATTAGGCACCATAAATTTAGTCTTCTTATAAGCATACACGATATTGAAGCTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* *
193359 TAGCTTT-GTACGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATG
326 T-GGTTTCGTAAGAAA-GCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATG
* * * * *
193423 TGACAAACATGGATTGC-AGTGATAATCTTCATTCACGTTGTGATTAGGCACTATGAACATATTC
389 TGACAAACATGGATT-CTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
* *
193487 TCCTCATTAGGATAAATGATATT
453 TCCTCCTTAGGATAAATGATATA
* * * * **
193510 GATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCATAACATCAATATTC-TTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATT-C
* * * * * * * *
193574 CCTAAAAAAGGCAAGCGTTGATTCTCATAATAGTCTCCACTGTTTTCAACATTGGGAACCAAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* *** * * ** ** *
193639 CACATTCCTTTT-ATTAGGATATATGACATTGATGCTTTGGTG-CTTAAAAAAAGCATTT-TTAT
130 CACATT-CTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTT-T
* * * * * * * * *
193701 TAGCAGTTTTTGATAGTACCAAAGTTTGCCTCTTAAATAAGACAAACAGGAGTAGTCACACTAAT
193 CAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAAT
*
193766 CCTCATTCTTTTTTGGATTAGGCACCAAAAACTTAGTCTTCTCATAATG-ATACACGATATTGAT
258 CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GCATACACGATATTGAT
* * * *
193830 GCTTTGGTTTTGCAAGAAAGCTTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCTTCAA
322 GGTTTGGTTTCGTAAGAAAGC-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAA
* * * * ** *
193895 ATGTGACAAACATGGATTGTAGTAATGATCTTCATTAACATTGTGATTAGGCACTACGAACATAT
386 ATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTAT
* *
193960 TCTCCTCATTAGGATAAATGATGT-
451 TCTCCTCCTTAGGATAAATGATATA
* * *
193984 GGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCAATC
1 GG-TGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTC
* * * * * *
194049 CTTAAATAAGGCAAGCACTGATTCTCGTAACAGTCTCCACTCTGTTCGAGGTTGGGAACCCAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
*
194114 CATATT-TCTTTC-ATAAGGATACGCGACATTGAC-TGTTTAATGTCGCAAGAAAAGCATTTCTT
130 CACATTCT-TTTCAAT-AGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAAGCATTTCTT
** * * *
194176 TCAACCGTTTTTGATAGAATCAAAGTTCATCTCTTAAAGAAGACAAACATGAACAGTCACACTAA
192 TCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAA
* * * * *
194241 TCCCCAATCTTTTTTGGATTAGGCACTATAAACTTAGTCTTCTCGTAATG-ATACATGATATTGA
257 TCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GCATACACGATATTGA
* * * *
194305 TGGTTTGGTTTTGTAAGAAACCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTTGTGCCTCAA
321 TGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAA
* * * * * * *
194370 AAGTGCCAAACATGGATACTAGCAGTAATCTTCATTCACGTTGTGATTAGGCAGTATAAAATTAT
386 ATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTAT
194435 TCTCCTCCTTAGGATAAATGATAT-
451 TCTCCTCCTTAGGATAAATGATATA
* * * * * *
194459 GGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTACTTTACATAAAATCAAAGTTCGTTC
1 GG-TGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTC
* * *
194524 CTTAAATAAGGCAAACATTGATTCTCACAACAATCTCCACTTTTTTCGAGATTGGGAACCAAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* * * * *
194589 CACATT-TCTTTCATTAGGATACGCAACATTGAC-TGTTTAATGTCGCATGAAAGGCATTTCTTC
130 CACATTCT-TTTCAATAGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAAGCATTTCTTT
* * *
194652 CAACCGTTTTTGATATAATCAAAGTCTGTCACTTAAATAAGACAAACATGAATAGTCACACAAAT
193 CAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAAT
*
194717 CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATG
258 CCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATG
* * *
194782 GTTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTCGTGCTTCAAAT
323 GTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAAT
*
194847 GTGACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
388 GTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTC
*
194912 TCCTCCTTAGCATAAATGATATA
453 TCCTCCTTAGGATAAATGATATA
194935 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
195000 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAT
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* *
195065 ACATTCCTTTCAATAGGTTACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
131 ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
195130 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
195195 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* *
195260 TGGATTCGCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
*
195325 ACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
*
195390 TCCTTAGCATAAATGATATA
456 TCCTTAGGATAAATGATATA
*
195410 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTTATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
195475 TTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTGGGAACCAAAAA
66 TTAAATAAGGCAAGCATTGATTCT-CATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* * *
195540 TACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCA
130 CACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCA
195605 ACCGTTTTTGATAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATAGTCACACAAATCC
195 ACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCC
195669 TCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGT
260 TCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGT
195734 TTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAA
325 TTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAA
195776 TGTATAGGTG
Statistics
Matches: 10690, Mismatches: 977, Indels: 198
0.90 0.08 0.02
Matches are distributed among these distances:
472 1 0.00
473 8 0.00
474 1683 0.16
475 7322 0.68
476 1640 0.15
477 36 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (475 bp):
GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
ACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
TCCTTAGGATAAATGATATA
Found at i:195408 original size:157 final size:157
Alignment explanation
Indices: 186182--195400 Score: 853
Period size: 159 Copynumber: 58.2 Consensus size: 157
186172 TTCTTTTTTG
* * * * *
186182 GATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATGGTTTGGATTCGTAAG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAAG
** * **
186247 AAAGC-TTTCTTCCCACCAATTTTGGTAAAGTTTATGTTCGTGCTTCAAATGTGACAAACATAGA
66 AAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAGA
*
186311 TTCTAGTAATGATCTTCATTCACGTTGT
131 TTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * *** * *
186339 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * * *
186404 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATT
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
186468 GATTCTCA-TAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * * * * ** * * * **
186498 GATTGGGAACCA-AAAATACATTC-CTTTCAATAGGGTACGCGACATTGA-CGTTTTAATGTCGC
1 GATTAGGCACCATAAACT-TATTCTC-CTCATTAGCATACACGATATTGATGGTTTGGAT-TCGC
* * ** * * * *
186560 AAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAA
63 AAG-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAAA
* * * ** *
186623 CAT-GA--ATAGTCACACAAATCCTCATTCTTTTTT
125 CATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * *
186656 GGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGCAA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
* * **
186721 GAAAGC-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCATGCCTCAAATGTGACAAACATAG
65 GAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAG
*
186785 ATTCTAGTAATGATCTTCATTCACGTTGT
130 ATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * *** * *
186814 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * * *
186879 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATT
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
186943 GATTCTCA-TAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * ** * * * * * * * *
186973 GATTGGGAACCAAAAACACATTC-CTTTCAATAGGATA-GCGACATTGACGCTTT-AATGTCGCA
1 GATTAGGCACCATAAACTTATTCTC-CTCATTAGCATACACGATATTGATGGTTTGGAT-TCGCA
*** ** * * * *
187035 AGAAAAGCATTTCTTTTAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAAC
64 AG-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAAAC
* * *
187098 AT-GA--ATAGTCACATAAATCCTCATT-CGTTTTT
126 ATAGATTCTAGT-A-AT-AATCTTCATTCCG-TTGT
* * * * * * *
187130 GGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGCTTGGTTTCGTAA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
* * * * * *
187195 GAAAGC-TTTCTTCCCACCATTTTTGGTAAAGTCTATGTTCGTTCCTCAAA-AGTGACAAATATG
65 GAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATA-AGACAAACATA
*
187258 GATTCTAGTAATGATCTTCATTCACGTTGT
129 GATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * * **** * *
187288 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTACCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * * *
187353 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATT
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
187417 GATTCTCA-TAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * ** ** * * * ** ** *
187447 GATTGGGAACCAAAAACACATTCTTTTCAATAGGATACACGACATTGA-CATTTTAATTTCGGAA
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGA-TTCGCAA
* * *** * * * *
187511 GAAAAGCATTTCTTTCAACTGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAACA
65 G-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAAACA
* * ** *
187574 T-GA--ATAGTCACACTAATCCTCATTCTTTTCT
127 TAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * * * * * * * * * * *
187605 AGATTAGGCACCATAAATTTAGTCTTCTTATAAGCATACACGATATTGAAGCTTTAGCTTTGTAC
1 -GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
* ** *
187670 GAAAGGC-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATG
65 GAAA-GCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
*
187734 GATTGC-AGTGATAATCTTCATTCACGTTGT
129 GATT-CTAGTAATAATCTTCATTC-CGTTGT
* * * * * * * *** * *
187764 GATTAGGCACTATGAACATATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * *
187829 GAAATCTTTTCTTTGC-CCTATTTTCCATAACA-TCAATATTC-TTCCCCTAAAAAAGGCAAGCG
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAA-AGTCAATGTTCGTGCCTC-AAATAAGACAAACA
* * * * *
187891 TTGATTCTCA-TAATAGTCTCCA--CTGTTTT
127 TAGATTCT-AGTAATAATCTTCATTCCGTTGT
* * * * ** * * * * * * * *
187920 CAACATTGGGAACCAAAAACACATTC-CTTTTATTAGGATATATGACATTGATGCTTTGG-TGCT
1 ---GATTAGGCACCATAAACTTATTCTC-CTCATTAGCATACACGATATTGATGGTTTGGATTC-
** * *** * * * * *
187983 TAAAAAAAGCATTT-TTATTAGCAGTTTTTG-ATAGTACCAAAGTT--TGCCTCTTAAATAAGAC
61 GCAAGAAAGCATTTCTTCCCACCAATTTTGGTAAAGT--CAATGTTCGTGCCTC--AAATAAGAC
* * * ** *
188044 AAACA-GGA--GTAGTCACACTAATCCTCATTCTTTTTT
122 AAACATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * * * * *
188080 GGATTAGGCACCA-AAACCTTAGTCTTCTCATAATG-ATACACGATATTGATGCTTTGGTTTTGC
1 -GATTAGGCACCATAAA-CTTATTCTCCTCATTA-GCATACACGATATTGATGGTTTGGATTCGC
* * * **
188143 AAGAAAGCTTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCTTCAAATGTGACAAACAT
63 AAGAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACAT
* * * * *
188208 GGATTGTAGTAATGATCTTCATTAACATTGT
128 AGATTCTAGTAATAATCTTCATT-CCGTTGT
* ** * * * * * * * *** * *
188239 GATTAGGCACTACGAACATATTCTCCTCATTAGGATAAATGATGTGGATGATTTTCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * *
188304 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCAAT-CCTTAAATAAGGCAAGCAC
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTC-GTGCCTCAAATAAGACAAACA-
* * * * * * *
188367 T-GATTCTCGTAACAGTCTCCACTCTGTTCGA
127 TAGATTCTAGTAATAATCTTCATTCCGTT-GT
* * * * * * * * * *
188398 GGTTGGGAACCCA-AAACATATT-TCTTTCATAAGGATACGCGACATTGACT-GTTT-AATGTCG
1 GATTAGGCA-CCATAAACTTATTCTC-CTCATTAGCATACACGATATTGA-TGGTTTGGAT-TCG
* * ** * * * * *
188459 CAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGTTCAT-CTCTTAAAGAAGACAA
62 CAAG-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAA
* ** * ** *
188522 ACAT-GA-AC-AGTCACACTAATCCCCAATCTTTTTT
124 ACATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * * * * * * * *
188556 GGATTAGGCACTATAAACTTAGTCTTCTCGTAATG-ATACATGATATTGATGGTTTGGTTTTGTA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTA-GCATACACGATATTGATGGTTTGGATTCGCA
* * * * * *
188620 AGAAA-CCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTTGTGCCTCAAA-AGTGCCAAACAT
64 AGAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATA-AGACAAACAT
* * * *
188683 GGATACTAGCAGTAATCTTCATTCACGTTGT
128 AGATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * * *** * *
188714 GATTAGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * * * * *** * * * * * *
188779 GAAATCTTTTCTTTGCC-CTACTTTACATAAAATCAAAGTTCGTTCCTTAAATAAGGCAAACATT
65 GAAAGCATTTC-TTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * * ** *
188843 GATTCTCA-CAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * ** * * * * * *
188873 GATTGGGAACCAAAAACACATT-TCTTTCATTAGGATACGCAACATTGACT-GTTT-AATGTCGC
1 GATTAGGCACCATAAACTTATTCTC-CTCATTAGCATACACGATATTGA-TGGTTTGGAT-TCGC
* * ** * * *
188935 ATGAAAGGCATTTCTTCCAACCGTTTTTGATATAA-TCAAAG-TC-TGTCACTTAAATAAGACAA
63 AAGAAA-GCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTG-C-CTCAAATAAGACAA
* * ** *
188997 ACAT-GAATAATC-A-CACA-AATCCTCATTCTTTTTT
124 ACATAG-AT--TCTAGTA-ATAATCTTCATTCCGTTGT
* * * * *
189031 GCATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATGGTTTGGATTCGTAA
1 G-ATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
** * **
189096 GAAAGC-TTTCTTCCCACCAATTTTGGTAAAGTTTATGTTCGTGCTTCAAATGTGACAAACATAG
65 GAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAG
*
189160 ATTCTAGTAATGATCTTCATTCACGTTGT
130 ATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * *** * *
189189 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * * *
189254 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATT
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
189318 GATTCTCA-TAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * * * * ** * * * **
189348 GATTGGGAACCA-AAAATACATTC-CTTTCAATAGGGTACGCGACATTGA-CGTTTTAATGTCGC
1 GATTAGGCACCATAAACT-TATTCTC-CTCATTAGCATACACGATATTGATGGTTTGGAT-TCGC
* * ** * * * *
189410 AAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAA
63 AAG-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAAA
* * * ** *
189473 CAT-GA--ATAGTCACACAAATCCTCATTCTTTTTT
125 CATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * *
189506 GGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGCAA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
* **
189571 GAAAGC-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAG
65 GAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAG
*
189635 ATTCTAGTAATGATCTTCATTCACGTTGT
130 ATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * *** * *
189664 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * * *
189729 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATT
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
189793 GATTCTCA-TAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * ** * ** * * * * * *
189823 GATTGGGAACCAAAAACACATTC-CTTTCAAAAGGATA-GCGACATTGACGCTTT-AATGTCGCA
1 GATTAGGCACCATAAACTTATTCTC-CTCATTAGCATACACGATATTGATGGTTTGGAT-TCGCA
*** ** * * * *
189885 AGAAAAGCATTTCTTTTAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAAC
64 AG-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAAAC
* * *
189948 AT-GA--ATAGTCACATAAATCCTCATT-CGTTTTT
126 ATAGATTCTAGT-A-AT-AATCTTCATTCCG-TTGT
* * * * * * *
189980 GGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGCTTGGTTTCGTAA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
* * * * * *
190045 GAAAGC-TTTCTTCCCACCATTTTTGGTAAAGTCTATGTTCGTTCCTCAAA-AGTGACAAATATG
65 GAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATA-AGACAAACATA
*
190108 GATTCTAGTAATGATCTTCATTCACGTTGT
129 GATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * * **** * *
190138 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTACCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * * *
190203 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATT
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
190267 GATTCTCA-TAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * ** ** * * * ** ** *
190297 GATTGGGAACCAAAAACACATTCTTTTCAATAGGATACACGACATTGA-CATTTTAATTTCGGAA
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGA-TTCGCAA
* * *** * * * *
190361 GAAAAGCATTTCTTTCAACTGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAACA
65 G-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAAACA
* * ** *
190424 T-GA--ATAGTCACACTAATCCTCATTCTTTTCT
127 TAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * * * * * * * * * * *
190455 AGATTAGGCACCATAAATTTAGTCTTCTTATAAGCATACACGATATTGAAGCTTTAGCTTTGTAC
1 -GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
* ** *
190520 GAAAGGC-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATG
65 GAAA-GCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
*
190584 GATTGC-AGTGATAATCTTCATTCACGTTGT
129 GATT-CTAGTAATAATCTTCATTC-CGTTGT
* * * * * * * *** * *
190614 GATTAGGCACTATGAACATATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * *
190679 GAAATCTTTTCTTTGC-CCTATTTTCCATAACA-TCAATATTC-TTCCCCTAAAAAAGGCAAGCG
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAA-AGTCAATGTTCGTGCCTC-AAATAAGACAAACA
* * * * *
190741 TTGATTCTCA-TAATAGTCTCCA--CTGTTTT
127 TAGATTCT-AGTAATAATCTTCATTCCGTTGT
* * * * ** * * * * * * * *
190770 CAACATTGGGAACCAAAAACACATTC-CTTTTATTAGGATATATGACATTGATGCTTTGG-TGCT
1 ---GATTAGGCACCATAAACTTATTCTC-CTCATTAGCATACACGATATTGATGGTTTGGATTC-
** * *** * * * * *
190833 TAAAAAAAGCATTT-TTATTAGCAGTTTTTG-ATAGTACCAAAGTT--TGCCTCTTAAATAAGAC
61 GCAAGAAAGCATTTCTTCCCACCAATTTTGGTAAAGT--CAATGTTCGTGCCTC--AAATAAGAC
* * * ** *
190894 AAACA-GGA--GTAGTCACACTAATCCTCATTCTTTTTT
122 AAACATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * * * * *
190930 GGATTAGGCACCA-AAACCTTAGTCTTCTCATAATG-ATACACGATATTGATGCTTTGGTTTTGC
1 -GATTAGGCACCATAAA-CTTATTCTCCTCATTA-GCATACACGATATTGATGGTTTGGATTCGC
* * * **
190993 AAGAAAGCTTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCTTCAAATGTGACAAACAT
63 AAGAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACAT
* * * * *
191058 GGATTGTAGTAATGATCTTCATTAACATTGT
128 AGATTCTAGTAATAATCTTCATT-CCGTTGT
* ** * * * * * * * *** * *
191089 GATTAGGCACTACGAACATATTCTCCTCATTAGGATAAATGATGTGGATGATTTTCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * *
191154 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCAAT-CCTTAAATAAGGCAAGCAC
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTC-GTGCCTCAAATAAGACAAACA-
* * * * * * *
191217 T-GATTCTCGTAACAGTCTCCACTCTGTTCGA
127 TAGATTCTAGTAATAATCTTCATTCCGTT-GT
* * * * * * * * * *
191248 GGTTGGGAACCCA-AAACATATT-TCTTTCATAAGGATACGCGACATTGACT-GTTT-AATGTCG
1 GATTAGGCA-CCATAAACTTATTCTC-CTCATTAGCATACACGATATTGA-TGGTTTGGAT-TCG
* * ** * * * * *
191309 CAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGTTCAT-CTCTTAAAGAAGACAA
62 CAAG-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAA
* ** * ** *
191372 ACAT-GA-AC-AGTCACACTAATCCCCAATCTTTTTT
124 ACATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * * * * * * * *
191406 GGATTAGGCACTATAAACTTAGTCTTCTCGTAATG-ATACATGATATTGATGGTTTGGTTTTGTA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTA-GCATACACGATATTGATGGTTTGGATTCGCA
* * * * * *
191470 AGAAA-CCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTTGTGCCTCAAA-AGTGCCAAACAT
64 AGAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATA-AGACAAACAT
* * * *
191533 GGATACTAGCAGTAATCTTCATTCACGTTGT
128 AGATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * * *** * *
191564 GATTAGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * * * * *** * * * * * *
191629 GAAATCTTTTCTTTGCC-CTACTTTACATAAAATCAAAGTTCGTTCCTTAAATAAGGCAAACATT
65 GAAAGCATTTC-TTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * * ** *
191693 GATTCTCA-CAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * ** * * * * * * *
191723 GATTGGGAACCAAAAACACATT-TCTTTCATTAGGATACGCAACATTGACT-GTTT-AATGTTGC
1 GATTAGGCACCATAAACTTATTCTC-CTCATTAGCATACACGATATTGA-TGGTTTGGAT-TCGC
* * ** * * *
191785 ATGAAAGGCATTTCTTCCAACCGTTTTTGATATAA-TCAAAG-TC-TGTCACTTAAATAAGACAA
63 AAGAAA-GCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTG-C-CTCAAATAAGACAA
* * ** *
191847 ACAT-GAATAATC-A-CACA-AATCCTCATTCTTTTTT
124 ACATAG-AT--TCTAGTA-ATAATCTTCATTCCGTTGT
* * * * *
191881 GCATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATGGTTTGGATTCGTAA
1 G-ATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
** * **
191946 GAAAGC-TTTCTTCCCACCAATTTTGGTAAAGTTTATGTTCGTGCTTCAAATGTGACAAACATAG
65 GAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAG
*
192010 ATTCTAGTAATGATCTTCATTCACGTTGT
130 ATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * *** * *
192039 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * * *
192104 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATT
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
192168 GATTCTCA-TAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * * * * ** * * * **
192198 GATTGGGAACCA-AAAATACATTC-CTTTCAATAGGGTACGCGACATTGA-CGTTTTAATGTCGC
1 GATTAGGCACCATAAACT-TATTCTC-CTCATTAGCATACACGATATTGATGGTTTGGAT-TCGC
* * ** * * * *
192260 AAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAA
63 AAG-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAAA
* * * ** *
192323 CAT-GA--ATAGTCACACAAATCCTCATTCTTTTTT
125 CATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * *
192356 GGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGCAA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
* **
192421 GAAAGC-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAG
65 GAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAG
*
192485 ATTCTAGTAATGATCTTCATTCACGTTGT
130 ATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * *** * *
192514 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * * *
192579 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATT
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
192643 GATTCTCA-TAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * ** * * * * * * * *
192673 GATTGGGAACCAAAAACACATTC-CTTTCAATAGGATA-GCGACATTGACGCTTT-AATGTCGCA
1 GATTAGGCACCATAAACTTATTCTC-CTCATTAGCATACACGATATTGATGGTTTGGAT-TCGCA
*** ** * * * *
192735 AGAAAAGCATTTCTTTTAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAAC
64 AG-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAAAC
* * *
192798 AT-GA--ATAGTCACATAAATCCTCATT-CGTTTTT
126 ATAGATTCTAGT-A-AT-AATCTTCATTCCG-TTGT
* * * * * * *
192830 GGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACATGATATTGATGGCTTGGTTTCGTAA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
* * * * * *
192895 GAAAGC-TTTCTTCCCACCATTTTTGGTAAAGTCTATGTTCGTTCCTCAAA-AGTGACAAATATG
65 GAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATA-AGACAAACATA
*
192958 GATTCTAGTAATGATCTTCATTCACGTTGT
129 GATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * * **** * *
192988 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTACCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * * *
193053 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATT
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
193117 GATTCTCA-TAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * ** ** * * * * ** ** *
193147 GATTGGGAACCAAAAACACATTCTTTTCAATAGGATACATGACATTGA-CATTTTAATTTCGGAA
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGA-TTCGCAA
* * *** * * * *
193211 GAAAAGCATTTCTTTCAACTGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAACA
65 G-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAAACA
* * ** *
193274 T-GA--ATAGTCACACTAATCCTCATTCTTTTCT
127 TAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * * * * * * * * * * *
193305 AGATTAGGCACCATAAATTTAGTCTTCTTATAAGCATACACGATATTGAAGCTTTAGCTTTGTAC
1 -GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
* ** *
193370 GAAAGGC-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATG
65 GAAA-GCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
*
193434 GATTGC-AGTGATAATCTTCATTCACGTTGT
129 GATT-CTAGTAATAATCTTCATTC-CGTTGT
* * * * * * * *** * *
193464 GATTAGGCACTATGAACATATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * *
193529 GAAATCTTTTCTTTGC-CCTATTTTCCATAACA-TCAATATTC-TTCCCCTAAAAAAGGCAAGCG
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAA-AGTCAATGTTCGTGCCTC-AAATAAGACAAACA
* * * * *
193591 TTGATTCTCA-TAATAGTCTCCA--CTGTTTT
127 TAGATTCT-AGTAATAATCTTCATTCCGTTGT
* * * * ** * * * * * * * *
193620 CAACATTGGGAACCAAAAACACATTC-CTTTTATTAGGATATATGACATTGATGCTTTGG-TGCT
1 ---GATTAGGCACCATAAACTTATTCTC-CTCATTAGCATACACGATATTGATGGTTTGGATTC-
** * *** * * * * *
193683 TAAAAAAAGCATTT-TTATTAGCAGTTTTTG-ATAGTACCAAAGTT--TGCCTCTTAAATAAGAC
61 GCAAGAAAGCATTTCTTCCCACCAATTTTGGTAAAGT--CAATGTTCGTGCCTC--AAATAAGAC
* * * ** *
193744 AAACA-GGA--GTAGTCACACTAATCCTCATTCTTTTTT
122 AAACATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * * * * * *
193780 GGATTAGGCACCAAAAACTTAGTCTTCTCATAATG-ATACACGATATTGATGCTTTGGTTTTGCA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTA-GCATACACGATATTGATGGTTTGGATTCGCA
* * * ** *
193844 AGAAAGCTTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCTTCAAATGTGACAAACATG
64 AGAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * *
193909 GATTGTAGTAATGATCTTCATTAACATTGT
129 GATTCTAGTAATAATCTTCATT-CCGTTGT
* ** * * * * * * * *** * *
193939 GATTAGGCACTACGAACATATTCTCCTCATTAGGATAAATGATGTGGATGATTTTCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * *
194004 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCAAT-CCTTAAATAAGGCAAGCAC
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTC-GTGCCTCAAATAAGACAAACA-
* * * * * * *
194067 T-GATTCTCGTAACAGTCTCCACTCTGTTCGA
127 TAGATTCTAGTAATAATCTTCATTCCGTT-GT
* * * * * * * * * *
194098 GGTTGGGAACCCA-AAACATATT-TCTTTCATAAGGATACGCGACATTGACT-GTTT-AATGTCG
1 GATTAGGCA-CCATAAACTTATTCTC-CTCATTAGCATACACGATATTGA-TGGTTTGGAT-TCG
* * ** * * * * *
194159 CAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGTTCAT-CTCTTAAAGAAGACAA
62 CAAG-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAA
* ** * ** *
194222 ACAT-GA-AC-AGTCACACTAATCCCCAATCTTTTTT
124 ACATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * * * * * * * *
194256 GGATTAGGCACTATAAACTTAGTCTTCTCGTAATG-ATACATGATATTGATGGTTTGGTTTTGTA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTA-GCATACACGATATTGATGGTTTGGATTCGCA
* * * * * *
194320 AGAAA-CCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTTGTGCCTCAAA-AGTGCCAAACAT
64 AGAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATA-AGACAAACAT
* * * *
194383 GGATACTAGCAGTAATCTTCATTCACGTTGT
128 AGATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * * *** * *
194414 GATTAGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * * * * *** * * * * * *
194479 GAAATCTTTTCTTTGCC-CTACTTTACATAAAATCAAAGTTCGTTCCTTAAATAAGGCAAACATT
65 GAAAGCATTTC-TTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
194543 GATTCTCA-CAACAATCTCCACTT-TTTTCGA
129 GATTCT-AGTAATAATCTTCA-TTCCGTT-GT
* * * ** * * * * * *
194573 GATTGGGAACCAAAAACACATT-TCTTTCATTAGGATACGCAACATTGACT-GTTT-AATGTCGC
1 GATTAGGCACCATAAACTTATTCTC-CTCATTAGCATACACGATATTGA-TGGTTTGGAT-TCGC
* * ** * * *
194635 ATGAAAGGCATTTCTTCCAACCGTTTTTGATATAA-TCAAAG-TC-TGTCACTTAAATAAGACAA
63 AAGAAA-GCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTG-C-CTCAAATAAGACAA
* * * ** *
194697 ACAT-GA--ATAGTCACACAAATCCTCATTCTTTTTT
124 ACATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * * * *
194731 GGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATGGTTTGGATTCGTAA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
** * **
194796 GAAAGC-TTTCTTCCCACCAATTTTGGTAAAGTTTATGTTCGTGCTTCAAATGTGACAAACATAG
65 GAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAG
*
194860 ATTCTAGTAATGATCTTCATTCACGTTGT
130 ATTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * *** * *
194889 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATG
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * ** * * * * * * * *
194954 GAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATT
65 GAAAGCATTTCTTCCCACCAATTTT-GGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
195018 GATTCTCA-TAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * * * * ** * * * **
195048 GATTGGGAACCA-AAAATACATTC-CTTTCAATAGGTTACGCGACATTGA-CGTTTTAATGTCGC
1 GATTAGGCACCATAAACT-TATTCTC-CTCATTAGCATACACGATATTGATGGTTTGGAT-TCGC
* * ** * * * *
195110 AAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAA
63 AAG-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAAA
* * * ** *
195173 CAT-GA--ATAGTCACACAAATCCTCATTCTTTTTT
125 CATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
* * *
195206 GGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGCAA
1 -GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAA
* **
195271 GAAAGC-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAG
65 GAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAG
*
195335 ATTCTAGTAATGATCTTCATTCACGTTGT
130 ATTCTAGTAATAATCTTCATTC-CGTTGT
** *
195364 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGCATA
1 GATTAGGCACCATAAACTTATTCTCCTCATTAGCATA
195401 AATGATATAG
Statistics
Matches: 6230, Mismatches: 2279, Indels: 1106
0.65 0.24 0.12
Matches are distributed among these distances:
154 6 0.00
155 27 0.00
156 84 0.01
157 1331 0.21
158 1557 0.25
159 2899 0.47
160 298 0.05
161 28 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (157 bp):
GATTAGGCACCATAAACTTATTCTCCTCATTAGCATACACGATATTGATGGTTTGGATTCGCAAG
AAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAGA
TTCTAGTAATAATCTTCATTCCGTTGT
Found at i:196106 original size:372 final size:373
Alignment explanation
Indices: 195399--196144 Score: 1255
Period size: 372 Copynumber: 2.0 Consensus size: 373
195389 CTCCTTAGCA
195399 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
*
195464 AGGTTTATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
66 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
* * * * *
195529 GGAACCAAAAATACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
131 GGAACCAAAAACACATTCCTTTCAAAAGGATACGCGACATTAACGTTTTAATGTCGCAAGAAAAA
*
195594 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCCTTAAATAAGACAAACATGAATAGTC
196 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCCTTAAATAAGACAAACACGAATAGTC
*
195659 ACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGA
261 ACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGA
* *
195724 TATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGG
326 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
* *
195772 TAAATG-TATAGGTGATTTCCTTTTGCATGGGAATCTTTTCTTTGCCGTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * *
195836 AGGTTCGTTCCTTAAATAAGGCAAGCATTGATTGT-CATAACAATCTCCACTCTTTTCGAGATTG
66 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
* *
195900 GGAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTAACGTTTTTATGTCGCAAGAAAAA
131 GGAACCAAAAACACATTCCTTTCAAAAGGATACGCGACATTAACGTTTTAATGTCGCAAGAAAAA
* * *
195965 CATTTCTTTCAACCGTTTTTGATGGAATCAAAGTTTGTCTCTTAAATAAGACAAGCACGAATTGT
196 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTC-CTTAAATAAGACAAACACGAATAGT
* *
196030 CACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAG-ATACAT
260 CACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGCATACAC
196094 GATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
324 GATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
196144 T
1 T
196145 GAAGTCTACG
Statistics
Matches: 349, Mismatches: 22, Indels: 5
0.93 0.06 0.01
Matches are distributed among these distances:
371 124 0.36
372 217 0.62
373 8 0.02
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.35
Consensus pattern (373 bp):
TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
GGAACCAAAAACACATTCCTTTCAAAAGGATACGCGACATTAACGTTTTAATGTCGCAAGAAAAA
CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCCTTAAATAAGACAAACACGAATAGTC
ACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGA
TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
Found at i:197596 original size:950 final size:949
Alignment explanation
Indices: 195772--199922 Score: 6762
Period size: 950 Copynumber: 4.4 Consensus size: 949
195762 CCAATTTTGG
* *
195772 TAAATG-TATAGGTGATTTCCTTTTGCATGGGAATCTTTTCTTTGCCGTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* *
195836 AGGTTCGTTCCTTAAATAAGGCAAGCATTGATTGTCATAACAATCTCCACTCTTTTCGAGATTGG
66 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
* * * * * * *
195901 GAACCAAAAACACATTCCTTTCAAAAGGATACGTGACATTAACGTTTTTATGTCGCAAGAAAAAC
131 GAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACATTTTAATGTCGCAAGAAAAGC
* * * *
195966 ATTTCTTTCAACCGTTTTTGATGGAATCAAAGTTTGTCTCTTAAATAAGACAAGCACGAATTGTC
196 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC
* *
196031 ACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACATGA
261 ACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACACGA
196096 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTG
326 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTG
* * * *
196161 CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCATGTT-TG-GT--GAAGTCT--
391 CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTATAA
* *
196220 AC--GTTC-CCACC--A--AT---T--T-TGGTGATTTCCTTTTGCATGGAAATCTTTTATTTGC
456 ACTTATTCTCCTCCTTAGGATAAATGATATGGTGATTTCCTTTTGCATGGAAATCTTTTATTTGC
* *
196272 CCTATTTTCCTTAAACTCAAGGTTCATTCCTTAAATATGGCAAGCATTGATTCTCATAACAATCT
521 CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCT
*
196337 CCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACATT
586 CCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACGTT
* *
196402 TTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATGGAATCAAAGTTTTTCTCTTAAAT
651 TTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
*
196467 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCGCCATAAACTTAGTC
716 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
*
196532 TTCTCATAAGCATACACGATAATGATGGTTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTT
781 TTCTCATAAGCATACACGATATTGATGGTTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTT
* * *
196597 GGTAAAGTTTATGTTTGTGCTTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCATTCACG
846 GGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCATTCACG
196662 TTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGCA
911 TTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGCA
196701 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* *
196766 AGGTTCATTCATTAATTAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
66 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
** *
196831 GAACCAAAAACACATTCTTTTCAATAGGATTTGCGACATTGACATTTTAATGTCACAAGAAAAGC
131 GAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACATTTTAATGTCGCAAGAAAAGC
*
196896 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATAGTC
196 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC
* *
196961 ACAAAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACATGA
261 ACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACACGA
* *
197026 TATCGATGGTTTGGCTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTT
326 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTG
*
197091 CATCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTATAA
391 CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTATAA
*
197156 ACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTACATGGAAATCTTTTATTTG
456 ACTTATTCTCCTCCTTAGGATAAATGATAT-GGTGATTTCCTTTTGCATGGAAATCTTTTATTTG
*
197221 CCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATATGGCAAGCATTGATTCTCATAACAATC
520 CCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATC
197286 TCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACGT
585 TCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACGT
*
197351 TTTAATGTCACAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAA
650 TTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAA
*
197416 TAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCGCCATAAACTTAGT
715 TAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGT
* *
197481 CTTCTCATAAGCATACACGATATTGATGGTTTGGTTTTGTAAGAAAGCTTTCTTCCCACCAATTT
780 CTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTT
* *
197546 TGGTAAAGTCTATGTTCGTGCCTCAAAGGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
845 TGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCATTCAC
*
197611 GTTGTGATTAGGCAGTATAAACTTATTCTCCT-CTGTAGGA
910 GTTGTGATTAGGCAGTATAAACTTATTCTCCTCCT-TAGCA
*
197651 TAAATGATATCGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
*
197716 AGGTTCATTCATTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
66 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
** *
197781 GAACCAAAAACACATTCTTTTCAATAGGATTTGCGACATTGACATTTTAATGTCACAAGAAAAGC
131 GAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACATTTTAATGTCGCAAGAAAAGC
197846 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC
196 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC
*
197911 ACACAAATCCTCATTCTTTTTTGGATTAGGAACCATAAACTTAGTCTTCTCGTACAGATACACGA
261 ACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACACGA
*
197976 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGT-AATGTCTACGTTCAT
326 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAA-GTCTACGTTCGT
*
198040 -CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGTAGTATA
390 GCCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTATA
* * * * *
198104 AACTTATTCTCCCCCTTAGGATAAATGATATGGACGATTTTCTTTTGCTTGGAAATCTTTTCTTT
455 AACTTATTCTCCTCCTTAGGATAAATGATATGG-TGATTTCCTTTTGCATGGAAATCTTTTATTT
* * *
198169 GCCCTACTTTCCTTAAAATCAAAGTTCATTCCATAAATAAGGCAAGCATTGATTCTCATAACAAT
519 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
* * *
198234 CTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTGCTTTCAATAGGATACGCGAGATTGACG
584 CTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACG
* * ** *
198299 CTTTAATGTCGTAAGAAAAGTGTTTCTTTCAACCGTTTTTGGTAGAATCAAAGTTTGTCTCTTAA
649 TTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAA
* *
198364 ATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTACGCATCATAAACTTAG
714 ATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAG
* *
198429 TCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATT
779 TCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATT
* * * * * * *
198494 TTGGTAATGTCTACGTTCAT-CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCA
844 TTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCATTCA
* * *
198558 CGTTGTGATTAGGTAGTATAAACTTATTCTCCCCCTTAGGA
909 CGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGCA
* * * * *
198599 TAAATGATAT-GGACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTACTTTACATAAAATC
1 TAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATC
* * * * *
198663 AAAGTTCGTTCCTTAAATAAGGCAAACATTGATTCTCACAACAATCTCCACTTTTTTCGAGATTG
65 AAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTG
* * * *
198728 GGAACCAAAAACACATT-TCTTTCATTAGGATACACAACATTGAC-TGTTTAATGTCGCATGAAA
130 GGAACCAAAAACACATTCT-TTTCAATAGGATACGCGACATTGACAT-TTTAATGTCGCAAGAAA
* * * * *
198791 GGCATTTCTTCCAACCGTTTTTGATATAATCAAAGTCTGTCACTTAAATAAGACAAACATGAATA
193 AGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
*
198856 GTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGCATAC
258 GTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAG-ATAC
* * * * *
198920 ACGATAAT-GATGGTTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGT
322 ACGAT-ATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGT
* * * * *
198984 TCGTGCTTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAG
386 TCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAG
*
199049 TATAAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTT
451 TATAAACTTATTCTCCTCCTTAGGATAAATGATAT-GGTGATTTCCTTTTGCATGGAAATCTTTT
* *
199114 CTTTGCCCTATTCTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
515 ATTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAA
* *
199179 CAATCTCCACTCTTTTCGAGATTGGGAACCAAAAATACATTCCTTTCAATAGGTTACGCGACATT
580 CAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATT
199244 GACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
645 GACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTC
199309 TTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
710 TTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAAC
*
199374 TTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGCAAGAAAGCTTTCTTCCCACC
775 TTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGTAAGAAAGCTTTCTTCCCACC
199439 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCA
840 AATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCA
199504 TTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGCA
905 TTCACGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGCA
199549 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
*
199614 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
66 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCT-CATAACAATCTCCACTCTTTTCGAGATTG
* * * *
199679 GGAACCAAAAATACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
130 GGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACATTTTAATGTCGCAAGAAAAG
199744 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATAGT
195 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
*
199808 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGCATACAC
260 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAG-ATACAC
* *
199872 GATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGT
324 GATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGT
199923 AAATGTATAG
Statistics
Matches: 3003, Mismatches: 180, Indels: 57
0.93 0.06 0.02
Matches are distributed among these distances:
929 6 0.00
930 406 0.14
931 2 0.00
932 1 0.00
934 5 0.00
936 2 0.00
938 3 0.00
939 4 0.00
941 1 0.00
943 2 0.00
946 1 0.00
947 6 0.00
948 422 0.14
949 894 0.30
950 1129 0.38
951 118 0.04
952 1 0.00
ACGTcount: A:0.30, C:0.20, G:0.15, T:0.35
Consensus pattern (949 bp):
TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
GAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACATTTTAATGTCGCAAGAAAAGC
ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC
ACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACACGA
TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTG
CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTATAA
ACTTATTCTCCTCCTTAGGATAAATGATATGGTGATTTCCTTTTGCATGGAAATCTTTTATTTGC
CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCT
CCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACGTT
TTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTC
TTCTCATAAGCATACACGATATTGATGGTTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTT
GGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCATTCACG
TTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGCA
Found at i:198281 original size:474 final size:475
Alignment explanation
Indices: 196237--199925 Score: 6145
Period size: 475 Copynumber: 7.8 Consensus size: 475
196227 CACCAATTTT
* *
196237 GGTGATTTCCTTTTGCATGGAAATCTTTTATTTGCCCTATTTTCCTTAAACTCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
196302 TTAAATATGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* *
196367 ACATTCCTTTCAATAGGGTACGCGACATTGACATTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
131 ACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
* *
196432 CCGTTTTTGATGGAATCAAAGTTTTTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* *
196497 CATTCTTTTTTGGATTAGGCGCCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATGGTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* * * *
196562 TGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTTGTGCTTCAAATGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
*
196627 ACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
*
196692 TCCTTAGCATAAATGATATA
456 TCCTTAGGATAAATGATATA
*
196712 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCA
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
196777 TTAATTAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* ** * *
196842 ACATTCTTTTCAATAGGATTTGCGACATTGACATTTTAATGTCACAAGAAAAGCATTTCTTTCAA
131 ACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
* *
196907 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATAGTCACAAAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* * *
196972 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAG-ATACATGATATCGATGGT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGCATACACGATATTGATGGT
* * * * * *
197036 TTGGCTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTTCATCAAATGT
325 TTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGT
* * *
197101 GCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTC
390 GACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTC
197166 CTCCTTAGGATAAATGATATA
455 CTCCTTAGGATAAATGATATA
* *
197187 GGTGATTTCCTTTTACATGGAAATCTTTTATTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
197252 TTAAATATGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* *
197317 ACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCACAAGAAAAGCATTTCTTTCAA
131 ACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
197382 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
*
197447 CATTCTTTTTTGGATTAGGCGCCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* *
197512 TGGTTTTGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAAGGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
197577 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
*
197642 T-CTGTAGGATAAATGATATC
456 TCCT-TAGGATAAATGATATA
*
197662 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCA
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
197727 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* ** * *
197792 ACATTCTTTTCAATAGGATTTGCGACATTGACATTTTAATGTCACAAGAAAAGCATTTCTTTCAA
131 ACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
197857 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* * *
197922 CATTCTTTTTTGGATTAGGAACCATAAACTTAGTCTTCTCGTACAG-ATACACGATATCGATGGT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGCATACACGATATTGATGGT
* * * *
197986 TTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAATGTCTACGTTCAT-CCTCAAATGT
325 TTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGT
* * * *
198050 GCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGTAGTATAAACTTATTCTC
390 GACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTC
*
198115 CCCCTTAGGATAAATGATAT-
455 CTCCTTAGGATAAATGATATA
* * * * *
198135 GGACGATTTTCTTTTGCTTGGAAATCTTTTCTTTGCCCTACTTTCCTTAAAATCAAAGTTCATTC
1 GG-TGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTC
*
198200 CATAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* * * * **
198265 CACATTGCTTTCAATAGGATACGCGAGATTGACGCTTTAATGTCGTAAGAAAAGTGTTTCTTTCA
130 CACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCA
*
198330 ACCGTTTTTGGTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCC
195 ACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCC
* *
198395 TCATTCTTTTTTGGATTACGCATCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGT
260 TCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGT
* * * *
198460 TTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAATGTCTACGTTCAT-CCTCAAATGT
325 TTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGT
* * * *
198524 GCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGTAGTATAAACTTATTCTC
390 GACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTC
*
198589 CCCCTTAGGATAAATGATAT-
455 CTCCTTAGGATAAATGATATA
* * * * * * *
198609 GGACGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTACTTTACATAAAATCAAAGTTCGTTC
1 GG-TGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTC
* * *
198674 CTTAAATAAGGCAAACATTGATTCTCACAACAATCTCCACTTTTTTCGAGATTGGGAACCAAAAA
65 CTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* * * * * * *
198739 CACATTTCTTTCATTAGGATACACAACATTGAC-TGTTTAATGTCGCATGAAAGGCATTTCTTCC
130 CACATTCCTTTCAATAGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAAGCATTTCTTTC
* * *
198803 AACCGTTTTTGATATAATCAAAGTCTGTCACTTAAATAAGACAAACATGAATAGTCACACAAATC
194 AACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATC
*
198868 CTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATGG
259 CTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGG
* * *
198933 TTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTCGTGCTTCAAATG
324 TTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATG
*
198998 TGACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCT
389 TGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCT
*
199063 CCTCCTTAGCATAAATGATATA
454 CCTCCTTAGGATAAATGATATA
*
199085 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTCTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
199150 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAT
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
*
199215 ACATTCCTTTCAATAGGTTACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
131 ACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
199280 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
199345 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
* *
199410 TGGATTCGCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
*
199475 ACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
*
199540 TCCTTAGCATAAATGATATA
456 TCCTTAGGATAAATGATATA
199560 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
*
199625 TTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTGGGAACCAAAAA
66 TTAAATAAGGCAAGCATTGATTCT-CATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAA
* *
199690 TACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCA
130 CACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCA
199755 ACCGTTTTTGATAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATAGTCACACAAATCC
195 ACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCC
199819 TCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGT
260 TCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGT
199884 TTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAA
325 TTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAA
199926 TGTATAGGTG
Statistics
Matches: 3021, Mismatches: 181, Indels: 24
0.94 0.06 0.01
Matches are distributed among these distances:
473 4 0.00
474 879 0.29
475 2000 0.66
476 138 0.05
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.35
Consensus pattern (475 bp):
GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
ACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
TCCTTAGGATAAATGATATA
Found at i:199529 original size:157 final size:157
Alignment explanation
Indices: 198882--199533 Score: 358
Period size: 159 Copynumber: 4.1 Consensus size: 157
198872 TTCTTTTTTG
* *
198882 GATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATAATGATGGTTTGGATTCGTAAG
1 GATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGCAAG
** * **
198947 AAAGC-TTTCTTCCCACCAATTTTGGTAAAGTTTATGTTCGTGCTTCAAATGTGACAAACATAGA
66 AAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAGA
*
199011 TTCTAGTAATGATCTTCATTCACGTTGT
131 TTCTAGTAATAATCTTCATTC-CGTTGT
** * * * * * * * * * *** * *
199039 GATTAGGCAGTATAAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATG
1 GATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGCA-A
* * ** * *** * * * * * * * *
199104 GAAATCTTTTCTTTGC-CCTATTCTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATT
65 GAAAGCATTTCTTCCCACCAATT-TTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATA
* * * ** *
199168 GATTCTCA-TAACAATCTCCACTCTTTTCGA
129 GATTCT-AGTAATAATCTTCATTCCGTT-GT
* * * * * ** * * * **
199198 GATTGGGAACCA-AAAATACATTCCTT-TCA-ATAGGTTACGCGACATTGA-CGTTTTAATGTCG
1 GATTAGGCACCATAAACT-TAGT-CTTCTCATA-AGCATACACGATATTGATGGTTTGGAT-TCG
* * ** * * * *
199259 CAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAA
62 CAAG-AAAGCATTTCTTCCCACCAATTTTGGTA-AAGTCAATGTTCGTGC-CTCAAATAAGACAA
* * * ** *
199322 ACAT-GA--ATAGTCACACAAATCCTCATTCTTTTTT
124 ACATAGATTCTAGT-A-A-TAATCTTCATTCCGTTGT
199356 GGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGCAA
1 -GATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGCAA
* **
199421 GAAAGC-TTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAG
65 GAAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAG
*
199485 ATTCTAGTAATGATCTTCATTCACGTTGT
130 ATTCTAGTAATAATCTTCATTC-CGTTGT
**
199514 GATTAGGCAGTATAAACTTA
1 GATTAGGCACCATAAACTTA
199534 TTCTCCTCCT
Statistics
Matches: 345, Mismatches: 122, Indels: 56
0.66 0.23 0.11
Matches are distributed among these distances:
155 1 0.00
156 4 0.01
157 114 0.33
158 40 0.12
159 162 0.47
160 24 0.07
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (157 bp):
GATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTTGGATTCGCAAG
AAAGCATTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATAAGACAAACATAGA
TTCTAGTAATAATCTTCATTCCGTTGT
Found at i:200256 original size:372 final size:373
Alignment explanation
Indices: 199549--200294 Score: 1273
Period size: 372 Copynumber: 2.0 Consensus size: 373
199539 CTCCTTAGCA
199549 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
199614 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
66 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
* * * *
199679 GGAACCAAAAATACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
131 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTAACGTTTTAATGTCGCAAGAAAAA
*
199744 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCCTTAAATAAGACAAACATGAATAGTC
196 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCCTTAAATAAGACAAACACGAATAGTC
*
199809 ACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGA
261 ACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGA
* *
199874 TATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGG
326 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
* *
199922 TAAATG-TATAGGTGATTTCCTTTTGCATGGGAATCTTTTCTTTGCCGTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * *
199986 AGGTTCGTTCCTTAAATAAGGCAAGCATTGATTGT-CATAACAATCTCCACTCTTTTCGAGATTG
66 AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
* *
200050 GGAACCAAAAACACATTCCTTTCAATAGGATACGTGACATTAACGTTTTTATGTCGCAAGAAAAA
131 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTAACGTTTTAATGTCGCAAGAAAAA
* * *
200115 CATTTCTTTCAACCGTTTTTGATGGAATCAAAGTTTGTCTCTTAAATAAGACAAGCACGAATTGT
196 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTC-CTTAAATAAGACAAACACGAATAGT
* *
200180 CACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAG-ATACAT
260 CACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGCATACAC
200244 GATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
324 GATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
200294 T
1 T
200295 GAAGTCTACG
Statistics
Matches: 351, Mismatches: 20, Indels: 5
0.93 0.05 0.01
Matches are distributed among these distances:
371 125 0.36
372 218 0.62
373 8 0.02
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.35
Consensus pattern (373 bp):
TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
AGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTACATAACAATCTCCACTCTTTTCAAGATTG
GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTAACGTTTTAATGTCGCAAGAAAAA
CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCCTTAAATAAGACAAACACGAATAGTC
ACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGA
TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
Found at i:201280 original size:475 final size:475
Alignment explanation
Indices: 200387--202883 Score: 4198
Period size: 475 Copynumber: 5.3 Consensus size: 475
200377 CACCAATTTT
* * *
200387 GGTGATTTCCTTTTGCATGGAAATCTTTTATTTGCCCTATTTTCCTTAAACTCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCA
*
200452 TTAAATATGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* *
200517 ACATTCCTTTCAATAGGGTACGCGACATTGACATTTTAATGTCGCAAGAAAAGCATTTCTTTCAA
131 ACATTCCTTTCAATAGGATACGCGACATTGACATTTTAATGTCACAAGAAAAGCATTTCTTTCAA
* *
200582 CCGTTTTTGATGGAATCAAAGTTTTTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
*
200647 CATTCTTTTTTGGATTAGGCGCCATAAACTTAGTCTTCTCATAAGCATACACGATAAT-GATGGT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGAT-ATCGATGGT
* * * *
200711 TTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTTGTGCTTCAAATGT
325 TTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGT
*
200776 GACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTC
390 GACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTC
*
200841 CTCCTTAGCATAAATGATATA
455 CTCCTTAGGATAAATGATATA
200862 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCA
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCA
200927 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* ** *
200992 ACATTCTTTTCAATAGGATTTGCGACATTGACATTTTATTGTCACAAGAAAAGCATTTCTTTCAA
131 ACATTCCTTTCAATAGGATACGCGACATTGACATTTTAATGTCACAAGAAAAGCATTTCTTTCAA
* *
201057 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATAGTCACAAAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* *
201122 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAG-ATACATGATATCGATGGT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGCATACACGATATCGATGGT
* * * *
201186 TTGGCTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTGCCTCAAATGT
325 TTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGT
* * *
201251 GCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTC
390 GACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTC
201316 CTCCTTAGGATAAATGATATA
455 CTCCTTAGGATAAATGATATA
* * *
201337 GGTGATTTCCTTTTACATGGAAATCTTTTATTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCA
*
201402 TTAAATATGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* *
201467 ACATTCCTTTCAATAGGGTACGCGACATTGACGTTTTAATGTCACAAGAAAAGCATTTCTTTCAA
131 ACATTCCTTTCAATAGGATACGCGACATTGACATTTTAATGTCACAAGAAAAGCATTTCTTTCAA
201532 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* *
201597 CATTCTTTTTTGGATTAGGCGCCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATCGATGGTT
* *
201662 TGGTTTTGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAAGGTG
326 TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
201727 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
391 ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
*
201792 T-CTGTAGGATAAATGATATC
456 TCCT-TAGGATAAATGATATA
201812 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCA
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCA
201877 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
* **
201942 ACATTCTTTTCAATAGGATTTGCGACATTGACATTTTAATGTCACAAGAAAAGCATTTCTTTCAA
131 ACATTCCTTTCAATAGGATACGCGACATTGACATTTTAATGTCACAAGAAAAGCATTTCTTTCAA
202007 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
196 CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
* *
202072 CATTCTTTTTTGGATTAGGAACCATAAACTTAGTCTTCTCGTACAG-ATACACGATATCGATGGT
261 CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGCATACACGATATCGATGGT
* * * *
202136 TTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAATGTCTACGTTCAT-CCTCAAATGT
325 TTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGT
* * * *
202200 GCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGTAGTATAAACTTATTCTC
390 GACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTC
*
202265 CCCCTTAGGATAAATGATAT-
455 CTCCTTAGGATAAATGATATA
* * * * *
202285 GGACGATTTTCTTTTGCTTGGAAATCTTTTCTTTGCCCTACTTTCCTTAAAATCAAAGTTCATTC
1 GG-TGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATT-
202350 CA-TAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAA
64 CATTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAA
* * ** ** **
202414 ACACATTGCTTTCAATAGGATACGCGAGATTGACGCTTTAATGTCGTAAGAAAAGTGTTTCTTTC
129 ACACATTCCTTTCAATAGGATACGCGACATTGACATTTTAATGTCACAAGAAAAGCATTTCTTTC
202479 AACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATC
194 AACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATC
* *
202544 CTCATTCTTTTTTGGATTAGGCATCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGG
259 CTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATCGATGG
*
202609 TTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAAAG
324 TTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATG
* *
202674 TGACAAATATGGATTCTAGCAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCT
389 TGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCT
202739 CCTCCTTAGGATAAATGATATA
454 CCTCCTTAGGATAAATGATATA
* ** *
202761 TGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTTTTTCC
1 GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCA
202826 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAAC
66 TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAAC
202884 TGATGAAAAC
Statistics
Matches: 1890, Mismatches: 120, Indels: 24
0.93 0.06 0.01
Matches are distributed among these distances:
473 4 0.00
474 439 0.23
475 1442 0.76
476 5 0.00
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (475 bp):
GGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCA
TTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAAC
ACATTCCTTTCAATAGGATACGCGACATTGACATTTTAATGTCACAAGAAAAGCATTTCTTTCAA
CCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACAAATCCT
CATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATCGATGGTT
TGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTG
ACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATTCTCC
TCCTTAGGATAAATGATATA
Found at i:202679 original size:949 final size:949
Alignment explanation
Indices: 199922--202883 Score: 5070
Period size: 950 Copynumber: 3.1 Consensus size: 949
199912 CCAATTTTGG
* *
199922 TAAATG-TATAGGTGATTTCCTTTTGCATGGGAATCTTTTCTTTGCCGTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * *
199986 AGGTTCGTTCCTTAAATAAGGCAAGCATTGATTGTCATAACAATCTCCACTCTTTTCGAGATTGG
66 AGGTTCATTCATTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
* ** * * * * * *
200051 GAACCAAAAACACATTCCTTTCAATAGGATACGTGACATTAACGTTTTTATGTCGCAAGAAAAAC
131 GAACCAAAAACACATTCTTTTCAATAGGATTTGCGACATTGACATTTTAATGTCACAAGAAAAGC
* * *
200116 ATTTCTTTCAACCGTTTTTGATGGAATCAAAGTTTGTCTCTTAAATAAGACAAGCACGAATTGTC
196 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATAGTC
*
200181 ACACAAATCCTCATTATTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACATGA
261 ACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACATGA
200246 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTG
326 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTG
* * *
200311 CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCATGTT-TG-GT--GAAGTCT--
391 CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGAAGTATAA
*
200370 AC--GTTC-CCACC--A--AT---T--T-TGGTGATTTCCTTTTGCATGGAAATCTTTTATTTGC
456 ACTTATTCTCCACCTTAGGATAAATGATATGGTGATTTCCTTTTGCATGGAAATCTTTTATTTGC
*
200422 CCTATTTTCCTTAAACTCAAGGTTCATTCCTTAAATATGGCAAGCATTGATTCTCATAACAATCT
521 CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATATGGCAAGCATTGATTCTCATAACAATCT
*
200487 CCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACATT
586 CCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACGTT
* *
200552 TTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATGGAATCAAAGTTTTTCTCTTAAAT
651 TTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
200617 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCGCCATAAACTTAGTC
716 AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCGCCATAAACTTAGTC
* *
200682 TTCTCATAAGCATACACGATAATGATGGTTTGGATTCGTAAGAAAGCTTTCTTCCCACCAATTTT
781 TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTT
* * * * *
200747 GGTAAAGTTTATGTTTGTGCTTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCATTCACG
846 GGTAAAGTCTATGTTCGTGCCTCAAAAGTGACAAACATGGATTCTAGTAATGATCTTCATTCACG
*
200812 TTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGCA
911 TTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGA
200851 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
200916 AGGTTCATTCATTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
66 AGGTTCATTCATTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
*
200981 GAACCAAAAACACATTCTTTTCAATAGGATTTGCGACATTGACATTTTATTGTCACAAGAAAAGC
131 GAACCAAAAACACATTCTTTTCAATAGGATTTGCGACATTGACATTTTAATGTCACAAGAAAAGC
201046 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATAGTC
196 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATAGTC
*
201111 ACAAAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACATGA
261 ACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACATGA
*
201176 TATCGATGGTTTGGCTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTG
326 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTG
*
201241 CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTATAA
391 CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGAAGTATAA
* *
201306 ACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTACATGGAAATCTTTTATTTG
456 ACTTATTCTCCACCTTAGGATAAATGATAT-GGTGATTTCCTTTTGCATGGAAATCTTTTATTTG
201371 CCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATATGGCAAGCATTGATTCTCATAACAATC
520 CCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATATGGCAAGCATTGATTCTCATAACAATC
201436 TCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACGT
585 TCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACGT
*
201501 TTTAATGTCACAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAA
650 TTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAA
201566 TAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCGCCATAAACTTAGT
715 TAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCGCCATAAACTTAGT
*
201631 CTTCTCATAAGCATACACGATATTGATGGTTTGGTTTTGTAAGAAAGCTTTCTTCCCACCAATTT
780 CTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTT
*
201696 TGGTAAAGTCTATGTTCGTGCCTCAAAGGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
845 TGGTAAAGTCTATGTTCGTGCCTCAAAAGTGACAAACATGGATTCTAGTAATGATCTTCATTCAC
201761 GTTGTGATTAGGCAGTATAAACTTATTCTCCT-CTGTAGGA
910 GTTGTGATTAGGCAGTATAAACTTATTCTCCTCCT-TAGGA
*
201801 TAAATGATATCGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
201866 AGGTTCATTCATTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
66 AGGTTCATTCATTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
201931 GAACCAAAAACACATTCTTTTCAATAGGATTTGCGACATTGACATTTTAATGTCACAAGAAAAGC
131 GAACCAAAAACACATTCTTTTCAATAGGATTTGCGACATTGACATTTTAATGTCACAAGAAAAGC
*
201996 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC
196 ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATAGTC
* *
202061 ACACAAATCCTCATTCTTTTTTGGATTAGGAACCATAAACTTAGTCTTCTCGTACAGATACACGA
261 ACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACATGA
*
202126 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGT-AATGTCTACGTTCAT
326 TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAA-GTCTACGTTCGT
*
202190 -CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGTAGTATA
390 GCCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGAAGTATA
* * * * *
202254 AACTTATTCTCCCCCTTAGGATAAATGATATGGACGATTTTCTTTTGCTTGGAAATCTTTTCTTT
455 AACTTATTCTCCACCTTAGGATAAATGATATGG-TGATTTCCTTTTGCATGGAAATCTTTTATTT
* * * *
202319 GCCCTACTTTCCTTAAAATCAAAGTTCATTCCATAAATAAGGCAAGCATTGATTCTCATAACAAT
519 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATATGGCAAGCATTGATTCTCATAACAAT
* * *
202384 CTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTGCTTTCAATAGGATACGCGAGATTGACG
584 CTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACG
* * **
202449 CTTTAATGTCGTAAGAAAAGTGTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAA
649 TTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAA
**
202514 ATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCATCATAAACTTAG
714 ATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCGCCATAAACTTAG
202579 TCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATT
779 TCTTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATT
* *
202644 TTGGTAAAGTCTATGTTCGTGCCTCAAAAGTGACAAATATGGATTCTAGCAATGATCTTCATTCA
844 TTGGTAAAGTCTATGTTCGTGCCTCAAAAGTGACAAACATGGATTCTAGTAATGATCTTCATTCA
202709 CGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGA
909 CGTTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGA
*
202750 TAAATGATATATGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
1 TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
** *
202815 AGGTTTTTTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
66 AGGTTCATTCATTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
202880 GAAC
131 GAAC
202884 TGATGAAAAC
Statistics
Matches: 1928, Mismatches: 80, Indels: 30
0.95 0.04 0.01
Matches are distributed among these distances:
929 6 0.00
930 409 0.21
931 2 0.00
932 1 0.00
934 5 0.00
936 2 0.00
938 3 0.00
939 4 0.00
941 1 0.00
943 2 0.00
946 1 0.00
948 3 0.00
949 663 0.34
950 826 0.43
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (949 bp):
TAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
AGGTTCATTCATTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCTTTTCGAGATTGG
GAACCAAAAACACATTCTTTTCAATAGGATTTGCGACATTGACATTTTAATGTCACAAGAAAAGC
ATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATAGTC
ACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTACAGATACATGA
TATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGTG
CCTCAAATGTGCCAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGAAGTATAA
ACTTATTCTCCACCTTAGGATAAATGATATGGTGATTTCCTTTTGCATGGAAATCTTTTATTTGC
CCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATATGGCAAGCATTGATTCTCATAACAATCT
CCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACGTT
TTAATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAAT
AAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCGCCATAAACTTAGTC
TTCTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTT
GGTAAAGTCTATGTTCGTGCCTCAAAAGTGACAAACATGGATTCTAGTAATGATCTTCATTCACG
TTGTGATTAGGCAGTATAAACTTATTCTCCTCCTTAGGA
Found at i:210956 original size:475 final size:474
Alignment explanation
Indices: 209540--230743 Score: 32907
Period size: 475 Copynumber: 44.7 Consensus size: 474
209530 CTTGTCATCA
* *
209540 GGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACATTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
*
209605 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGC
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * *
209670 CACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGGTACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
*
209735 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCTACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * * *
209800 GCCTCAAATGTGCCAAACATGGATTCTTGTAATGATCTTCACTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* * *
209865 AACTTATTCTCCTCCTTAGGATAAATGATAT-GGATGATTTTCTTTTGCATAGAAATCTTCTCTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCTT
* * * *
209929 TGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAGATATGGAAAGCATTGATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
*** *
209994 TCTCTGTTCTTTTCAAGATTG
454 TCTCCACTCTTTTCGAGATTG
* *
210015 GGAACTAAAAACACATTCCTTTCAATAGGATACGC-AGCATTGACGCTTTAATGTCGCAAGAAAA
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGA-CATTGACGTTTTAATGTCGCAAGAAAA
* *
210079 GCATTACTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG
65 GCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG
* * * * *
210144 TCACACTAATCCTCATTCTTTTCTGTATTAGGCACCATAAACTTACTTTTCTCATAAGCATACAC
130 TCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACAC
* * * * * * *
210209 GATATTGAAGCTTTAGCTTT-GTAAGAAAGGCTTTCTTCCCACCAATTTTTGAAAATTCTATGTT
194 GATATTGATGGTTT-GGTTTCGTAAGAAA-GCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTT
* * * * * *
210273 CGTGCCTCAAATGTGACAAACACGGATTGTAGTAATAATCTTCATTCATGTTGTGATTTGGCACT
257 CGTGCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGT
** * * * * *
210338 ACGAACATATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC
322 ATAAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTC
* ** *
210403 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGCAAT
387 TTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
** * *
210468 AGCCTCTACTCTTTTCGAGGTTG
452 AATCTCCACTCTTTTCGAGATTG
* * * *
210491 GGAACCCAAAACATATTTCTTTCATTAGGATACGCGACATTGAC-TGTTTAATGTCGCAAGAAAA
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAA
* * ** * *
210555 GCATTTCTATCAACGGTTTTTGATAGAATCAAAGTTCATTTCTTAAATAAGACAAACATGAACAG
65 GCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG
* * * * *
210620 TCATACTAATCCTCATTCTTTTTTGGATTAGGCACTATAAGCTTAGTCTTCTCGTAATGATACAC
130 TCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACAC
* *
210685 GATATTGATGGTTTGGTTTTGTAAGAAACCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
194 GATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
* ** * * *
210750 TGCCTAAAAAGTGTGAAACATGGATACTAGTAGTAATCTTCATTCACATTGTGATTAGGCAGTAT
259 TGCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
* * *
210815 AAAATTATTCTCCTCCTTAGGATAACTGATAT-GGATGATTTTCTTTTGCATGGAAATCTTTTCT
324 AAACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCT
* * * * *
210879 TTGCCATACTTTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCACAACA
388 TTGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACA
*
210944 ATCTCCACTCTTTTTGAGATTG
453 ATCTCCACTCTTTTCGAGATTG
* * * *
210966 GGAACCAAAAGCACATTCCTTTCATTAGGATACGCGACATTGAC-TGTTTAATGTCGCATGAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAA
* * *
211030 GCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTCTGTCTCTTAAATAAGACAAACTTGAATAG
65 GCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG
211095 TCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACAC
130 TCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACAC
*
211160 GATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
194 GATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
* *
211225 TGCCTCAAATGTGACAAACATAGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
259 TGCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
** *
211290 AAACTTATTCTCCTCCTTATCATAAATGATATAGGTGATTTCATTTTGCATGGAAATCTTTTCTT
324 AAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
*
211355 TGTCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
211420 TCTCCACTCTTTTCGAGATTG
454 TCTCCACTCTTTTCGAGATTG
* *
211441 GGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACATTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
211506 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
211571 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACATAGTCTTCTCGTACAGATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGATACACG
* * * *
211636 ATATCGATGGTTTAGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * *
211701 GCCTCAAACA-TAACAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTAT
260 GCCTCAAA-AGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
* * * *
211765 AAACTTATTCTCCCCCTTAGGATAAATGATAT-GGACGATTTTCTTTTGCTTGGAAATCTTTTCT
324 AAACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCT
* * *
211829 TTGCCCTACTTTCCTTAAAATCAAAGTTCATTCCATAAATAAGGCAAGCATTGATTCTCATAACA
388 TTGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACA
*
211894 ATCTCCACTCTTTTTGAGATTG
453 ATCTCCACTCTTTTCGAGATTG
211916 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* *
211981 CATTTCTTTCAACCGTTTTTGATAGAATCAAAATTTGTCACTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * * *
212046 CACACTAATCCTCAATCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGGTACACA
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
212111 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
212176 GCCTCAAATGTGCCAAGCATGGATTCTAGTAATAATCTTCGTTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
212241 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
* *
212306 GCCTTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
*
212371 CTCCACTCTTTTCAAGATTG
455 CTCCACTCTTTTCGAGATTG
* *
212391 GGAACCAAAAACACGTTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
*
212456 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
212521 CACACAAATCCTCATTCTTTCTTGGATTAGGCACCATAAACTTAGTCTTCTCGTAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* * ** *
212586 ATATCGATGGTTTGGTTTCGCAAGAAAGCTTTTTTCCCACCAATTTTGGTAAAGTCTATGTTCAT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
212651 GCCTCAAAACTGACAAATATGGATTCTAGAAATGATCTTCATTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
212716 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
212781 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
212846 CTCCACTCTTTTCGAGATTG
455 CTCCACTCTTTTCGAGATTG
* *
212866 GGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACATTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* *
212931 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAGACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
*
212996 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTGTTCTCATAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* *
213061 ATATTGATGGTTTGGTTTTGCAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * * * *
213126 GCCTCAATAGTGCCAAACATGGATACTAGTAGTAATCTTCATTCACGATGAGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* * *
213191 AAATTATTCTCCTTCTTAGGATAAATGATAT-GGTTGATTTCCTTTTGCATGGAAATCATTTCTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCTT
* * *
213255 TGCCCTA-TTTCCTTCAAATCAAGGTTCTTTCCTTAAATAAGGCAAGCATTAATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
*
213319 TCTCCACTCTTTTCGAGAATG
454 TCTCCACTCTTTTCGAGATTG
* * *
213340 GGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTAACGTTTTAATGTTGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
213405 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
213470 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACATAGTCTTCTCGTACAGATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGATACACG
* * * *
213535 ATATCGATGGTTTAGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * *
213600 GCCTCAAACA-TAACAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTAT
260 GCCTCAAA-AGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
* * * *
213664 AAACTTATTCTCCCCCTTAGGATAAATGATAT-GGACGATTTTCTTTTGCTTGGAAATCTTTTCT
324 AAACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCT
* * *
213728 TTGCCCTACTTTCCTTAAAATCAAAGTTCATTCCATAAATAAGGCAAGCATTGATTCTCATAACA
388 TTGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACA
213793 ATCTCCACTCTTTTCGAGATTG
453 ATCTCCACTCTTTTCGAGATTG
213815 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* *
213880 CATTTCTTTCAACCGTTTTTGATAGAATCAAAATTTGTCACTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * * * * *
213945 CACACTAATCCTCAATCTTTTCTAGATTAGACACCATAAACTTAGTCTTCTCATAAGGGTACACA
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
214010 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
214075 GCCTCAAATGTGCCAAGCATGGATTCTAGTAATAATCTTCGTTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
214140 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
* *
214205 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATATGTCAAGCATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
214270 CTCCACTCTTTTCGAGATTG
455 CTCCACTCTTTTCGAGATTG
* **
214290 GGAACCAAAAACACGTTCCTTTCAATAGGATACGCGACATTGACACTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
214355 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
214420 CACACAAATCCTCATTCTTTCTTGGATTAGGCACCATAAACTTAGTCTTCTCGTAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* * *
214485 ATATTGATGGTTTGGTTTCGCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCAT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
214550 GCCTCAAAACTGACAAATATGGATTCTAGAAATGATCTTCATTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
214615 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
*
214680 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTAATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
214745 CTCCACTCTTTTCGAGATTG
455 CTCCACTCTTTTCGAGATTG
* * *
214765 GGAACCAAAAACACATTCCTTTCAATTGGGTACGCGACATTGACATTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
*
214830 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCACTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * * * *
214895 CACACTAATCCTCAATCTTTTCTGGATTAGGCACCATAAACTTAGTCCTCTCATAAGGGTACACA
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
214960 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
215025 GCCTCAAATGTGCCAAGCATGGATTCTAGTAATAATCTTCGTTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
215090 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
* *
215155 GCCTTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
*
215220 CTCCACTCTTTTCAAGATTG
455 CTCCACTCTTTTCGAGATTG
* *
215240 GGAACCAAAAACACGTTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
215305 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
215370 CACACAAATCCTCATTCTTTCTTGGATTAGGCACCATAAACTTAGTCTTCTCGTAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* * * *
215435 ATATCGATGGTTTGGTTTCGCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCAT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
215500 GCCTCAAAACTGACAAATATGGATTCTAGAAATGATCTTCATTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
215565 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
215630 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
215695 CTCCACTCTTTTCGAGATTG
455 CTCCACTCTTTTCGAGATTG
* *
215715 GGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACATTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
*
215780 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAGACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
*
215845 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTGTTCTCATAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* *
215910 ATATTGATGGTTTGGTTTTGCAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * * * *
215975 GCCTCAATAGTGCCAAACATGGATACTAGTAGTAATCTTCATTCACGATGAGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* * *
216040 AAATTATTCTCCTTCTTAGGATAAATGATAT-GGTTGATTTCCTTTTGCATGGAAATCATTTCTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCTT
* *
216104 TGCCCTA-TTTCCTTAAAATCAAGGTTCTTTCCTTAAATAAGGCAAGCATTAATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
*
216168 TCTCCACTCTTTTCGAGAATG
454 TCTCCACTCTTTTCGAGATTG
* * *
216189 GGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTAACGTTTTAATGTTGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
216254 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * *
216319 CACTCAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACATAGTCTTCTCGTACAGATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGATACACG
* * * *
216384 ATATCGATGGTTTAGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * *
216449 GCCTCAAACA-TAACAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTAT
260 GCCTCAAA-AGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
* * * *
216513 AAACTTATTCTCCCCCTTAGGATAAATGATAT-GGACGATTTTCTTTTGCTTGGAAATCTTTTCT
324 AAACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCT
* * *
216577 TTGCCCTACTTTCCTTAAAATCAAAGTTCATTCCATAAATAAGGCAAGCATTGATTCTCATAACA
388 TTGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACA
216642 ATCTCCACTCTTTTCGAGATTG
453 ATCTCCACTCTTTTCGAGATTG
216664 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* *
216729 CATTTCTTTCAACCGTTTTTGATAGAATCAAAATTTGTCACTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * * *
216794 CACACTAATCCTCAATCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGGTACACA
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
216859 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
216924 GCCTCAAATGTGCCAAGCATGGATTCTAGTAATAATCTTCGTTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* *
216989 AACTTATTCTCCTCCTT-GGCATAAATGATATAGGTGGTTTCCTTTTGCATGAAAATCTTTTCTT
325 AACTTATTCTCCTCCTTAGG-ATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
*
217053 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAGCAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
*
217118 TCTCCACTCTTTTCAAGATTG
454 TCTCCACTCTTTTCGAGATTG
* *
217139 GGAACCAAAAACACGTTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* *
217204 CATTTCTTTCAACCGTTTTTGAGAGAATCAAAGTTTGTCTCATAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
217269 CACACAAATCCTCATTCTTTCTTGGATTAGGCACCATAAACTTAGTCTTCTCGTAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* * * *
217334 ATATCGATGGTTTGGTTTCGCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCAT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
217399 GCCTCAAAACTGACAAATATGGATTCTAGAAATGATCTTCATTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* *
217464 AACTTATTCTCCTCCTTAGCATAAATGATTTAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
*
217529 G--CTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGTATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
217592 CTCCACTCTTTTCGAGATTG
455 CTCCACTCTTTTCGAGATTG
* *
217612 GGAACCAAAAACACATTCCTTTCAATAGGGTACGCGA-ATTGACATTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * *
217676 CATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAGACATGCATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
217741 CACACAAATCCTAATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCTTACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* *
217806 ATATTGATGGTTTGGTTTTGCAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * * * *
217871 GCCTCAATAGTGCCAAACATGGATACTAGTAGTAATCTTCATTCACGATGAGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* *
217936 AAATTATTCTCCTCCTTAGGATAAATGATAT-GGATGATTTCCTTTTGCATGGAAATCATTTCTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCTT
* *
218000 TGCCCTA-TTTCCTTAAAATCAAGGTTCTTTCCTTAAATAAGGCAAGCATTAATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
*
218064 TCTCCACTCTTTTCGAGAATG
454 TCTCCACTCTTTTCGAGATTG
* * * * *
218085 GAAACCAAAAACACATTCTTTTCAAAAGGATACGCGACATTAACATTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
218150 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
218215 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACATAGTCTTCTCGTACAGATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGATACACG
* * *
218280 ATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
218345 GCCTCAAACGTAACAAACATGGATTCTAGTAGTCATCTTCATTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* * *
218410 AACTTATTCTCC-CTCTTAGGATAAATGATAT-GGACGATTTTCTTTTGCTTGGAAATCTTTTCT
325 AACTTATTCTCCTC-CTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCT
* ** * *
218473 TTGCCCTACTTTCCTTAAAATCAAACTTAATTCCATAAATAAGGCAAGCATTGATTCTCATAACA
388 TTGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACA
218538 ATCTCCACTCTTTTCGAGATTG
453 ATCTCCACTCTTTTCGAGATTG
218560 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * *
218625 CATTTCTTTCGACCGTTTTTGATAGAATCAAAATTTGTCACTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
218690 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACATAGTCTTCTCGTACAGATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGATACACG
* * *
218755 ATATCGACGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGCCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * *
218820 GCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* *
218885 AACTTATTCTCCTCCTTAGGATGAATGATAT-GGATGATTTTCTTTTGCATGGAAATCTTTTCTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCTT
* ** * *
218949 TGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCGCAATAG
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
* *
219014 CCTCCACTCTTTTCGAGGTTG
454 TCTCCACTCTTTTCGAGATTG
* * * *
219035 GGAACCCAAAACATATTTCTTTCATTAGGATACGCGACATTGAC-TGTTTAATGTCGCAAGAAAA
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAA
* ** * ** * *
219099 GCATTTCTATCTGCGGTTTTTGATAGAATCAAAGTTCATTTCTTAAATAAGACAAACATGAACAG
65 GCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG
* * * * *
219164 TCATACTAATCCTCATTCTTTTCTGGATTAGGCACTATAAACTTAGTCTTCTCGTAATGATACAC
130 TCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACAC
* * *
219229 GATATTGATGGTTTGGTTTTGTAAGAAACCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCA
194 GATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
* * * * *
219294 TGCCTAAAAAGTG-CGAAACATGGATACTAGTAGTAATCTTCAATCACATTGTGATTAGGCAGTA
259 TGCCTCAAAAGTGAC-AAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTA
* **
219358 TAAAATTATTCTCCTCCTTAGGATAAATGATAT-GGATGATTTTGTTTTGCATGGAAATCTTTTC
323 TAAACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTC
* * * * *
219422 TTTGCCATACTTTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCACAAC
387 TTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
*
219487 AATCTCCACTCTTTTTGAGATTG
452 AATCTCCACTCTTTTCGAGATTG
* * * * * *
219510 GGAACCAAAAGCACATTCCTCTCATTAGGATACGCAACATTGAC-TGTTTAATGTCGCATGAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAA
* *
219574 GCATTTCTTCCAACCGTTTTTGATAGAATCAAAGTCTGTCTCTTAAATAAGACAAACATGAATAG
65 GCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG
*
219639 TCACACAAATCCTCATTCTTTTTTGGATTTGGCACCATAAACTTAGTCTTCTCATAAGCATACAC
130 TCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACAC
*
219704 GATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
194 GATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
* *
219769 TGCCTCAAATGTGACAAACATAGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
259 TGCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
** *
219834 AAACTTATTCTCCTCCTTATCATAAACGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
324 AAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
219899 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
219964 TCTCCACTCTTTTCGAGATTG
454 TCTCCACTCTTTTCGAGATTG
* *
219985 GGAACCAAAAACACATTCCTTTCAATAGGGTACGCGACATTGACGCTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
220050 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
*
220115 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* * *
220180 ATATTGATGGTTTGGTTCCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCAT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * *
220245 GCCTCAAAACTGAC-AACTATGGATTCTAGAAATGATCTTCATTCACGTTGTGATTAGGCAGTAT
260 GCCTCAAAAGTGACAAAC-ATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
*
220309 AAACTTATTCTCCTCCTTAGGATAAATGATATACGTGATTTCCTTTTGCATGGAAATCTTTTCTT
324 AAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
*
220374 TGCCCTGTTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
* *
220439 TCTCCACTCTTTTCTAGATTA
454 TCTCCACTCTTTTCGAGATTG
*
220460 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGAAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* *
220525 CATTTCTTTCAACCGTTTTTGATAGAATCAAAATTTGTCACTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * *
220590 CACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGGTACACA
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
220655 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * *
220720 GCCTCAAATGTGCCAAGCATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
220785 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
220850 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
* *
220915 CTACACTCTTTTCGGGATTG
455 CTCCACTCTTTTCGAGATTG
* *
220935 GGAACCAAAAACACATTCTTTTCAATAGGATAGGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * * *
221000 CATTTCTTTCAACCATTTTTTATAGAATCAAAGTTTGTCTCTTAATTAAGACAAACATGAGTAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * * *
221065 -ACACCAATCCTCATTCTTTTCTGGATTGGGCACCGTAAACTTAGTCTTCTCATAAGGGTACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
* * *
221129 ATATTGATGGTTTGGTTTCGTAAGAAATCTTCCTTCCCACCAATTTCGGTAAAGCCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * *
221194 GCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* * * *
221259 AACTTATTCTCCTCCTTAGGATGAATGATAT-GGATGATTTTCTTTTGCATAGAAATCTTCTCTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCTT
* * *
221323 TGCCCTATTTTCCTTAAAATTAAAGTTCATTCCTTAGATAAGGCAAGCATTGATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
* ** * *
221388 TCGCTGCTCGTTTCAAGATTG
454 TCTCCACTCTTTTCGAGATTG
* * *
221409 GGAACTAAAAACACATTCCTTTCAATAGGATACGCGGCATTGACGCTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * *
221474 CATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAAACAAAGATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * * *
221539 CACACTAATCCTCATTCTTTTCTGTATTAGGCACCATAAACTTACTTTTCTCATAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* * * *
221604 ATATTGAAGCTTTAGCTTT-GTAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTC
195 ATATTGATGGTTT-GGTTTCGTAAGAAA-GCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTC
* * * * *
221668 GTGCCTCAAATGTGACAGACATGGATTGTGGTAATAATCTTCATTCACGTTGTGATTAGGCACTA
258 GTGCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTA
* * * * * * *
221733 TGAACATATTCTCCTCATTAGGATACATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCT
323 TAAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCT
* * * ** * * ** *
221798 TTACCCTATTTTCCATAACATCAATATTC-TTCCCTTAAAAAAGGCAAGCGTTGATTCTTGTAAT
388 TTGCCCTATTTTCCTTAAAATCAAGGTTCATT-CCTTAAATAAGGCAAGCATTGATTCTCATAAC
* * *
221862 AGTCTCCACTCTTTTCAACATTG
452 AATCTCCACTCTTTTCGAGATTG
* *** * * ** *
221885 GGAACCAAAAACACATTCCTTTCATTAGGATATATGACATTGATGCTTTGGTG-CTGTAA-AAAA
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTC-GCAAGAAAA
* * * * * * * *
221948 GCATTTCTATCAGCGGTTTTTGATAGTACCAATGTTTGCCTC-T---TAAGACAAACAGGAATAG
65 GCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG
* * *
222009 TCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAATCTTCTCATAATGATACAT
130 TCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACAC
* * * *
222074 GATATTGATGCTTTGGTTTTGCAAGAAAGCTTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTC
194 GATATTGATGGTTTGGTTTCGTAAGAAAGC-TTCCTTCCCACCAATTTTGGTAAAGTCTATGTTC
* * * * ** * * *
222139 GTGCTTCAAATGTGACAAACATGGATTGTGGTAACGATCTTCATTAACATTGTGATTAGGCACTA
258 GTGCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTA
** * * * * *
222204 CGAACATATTCTCCTCATTAGGATAAAAGATGT-GGATGATTTTCTTTTGCATGGAAATCTTTTC
323 TAAACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTC
* * * * *
222268 TTTGCCCTACTTTCCATAAACTCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCACAAC
387 TTTGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAAC
222333 AATCTCCACTCTTTTCGAGATTG
452 AATCTCCACTCTTTTCGAGATTG
* * * * * *
222356 GGAACCAAAAACACATTCCTTTCATTAAGATACACAACATTGAC-TGTTTAATGTCGCATGAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGT-TTTAATGTCGCAAGAAAA
* * * *
222420 GCATTTCTTCCAACTGTTTTTGATAGAATCAAAGTCTGTCTCCTAAATAAGACAAACATGAATAG
65 GCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG
222485 TCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGCATACAC
130 TCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACAC
* *
222550 GATATTGATGGTTTGGTTTCATAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
194 GATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
* * * * *
222615 TGCCTCAAATGTGACAAACATAGATTCTAGCAATGATCTTCATTCACGTTGTGATTAGGTAGTAT
259 TGCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
* * *
222680 AAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCATTTACATGGAAATCTTTTCTT
324 AAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
*
222745 TGCCCTATTTTCCTT-AAATCAAGGTTTATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
*
222809 TCTCCACTCTTTTCGAGATTA
454 TCTCCACTCTTTTCGAGATTG
* * * *
222830 AGAACCAAAAACACATTCCCTTCAATAGGGTACGCGACATTGACATTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * *
222895 CATTTCTTTCAACCGTTTTTGATGGAATCAAAGTTTGTCTCTTGAATAAGACAAACATTAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* ** * * * *
222960 CACACTAATCCTCATTC-TTCCTGGATTAGGCACAATAAAATTAGTCTTTTCATGAGGATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCAT-AAGATACACG
* *
223024 ATATTGACGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTATAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * * * *
223089 GCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCAATCACGTTGTGATTAGGTAGTGTA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
223154 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
* *
223219 GCCCTATTTTCCTTAAAATCAATGTTCATTCCTTAAATAAGGCAAACATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
223284 CTCCACTCTTTTCGAGATTG
455 CTCCACTCTTTTCGAGATTG
* *
223304 GGAACCAAAAACACGTTCCTTTCAATAGGATACGCGACATTGACGCTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* *
223369 CATTTTTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAGCATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
223434 CACACAAATCCTCATTCTTTCTTGGATTAGGCACCATAAACTTAGTCTTCTCGTAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* * * * *
223499 ATATTGACGGTTTGGTTTTGCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCAT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
223564 GCCTCAAAACTGACAAATAGGGATTCTAGAAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
223629 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
223694 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
223759 CTCCACTCTTTTC-AGGATTG
455 CTCCACTCTTTTCGA-GATTG
* *
223779 GGAACCAAAAACACATTCTTTTCAATAGGATAGGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * * *
223844 CATTTCTTTCAACCATTTTTTATAGAATCAAAGTTTGTCTCTTAATTAAGACAAACATAAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * * * *
223909 -AGACCAATCCTCATTCTTTTCTGGATTGGGCACCGTAAACTTAGTCTTCTCATAAGGGTACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
* *
223973 ATATTGATGGTTTGGTTTTGCAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * * *
224038 GCCTCAATAGTGCCAAACATGGATACTAGTAGTAATCTTCATTCACGTTGAGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* *
224103 AAATTATTCTCCTCCTTAGGATAAATGATAT-GGATGATTTCATTTTGCATGGAAATCTTTTCTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCTT
* * *
224167 TGCCCTA-TTTCCTTAAAATCAAGGTTCTTTCCTTAAATAAGGCATGCATTAATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
*
224231 TCTCCACTCTTTTCGAGAATG
454 TCTCCACTCTTTTCGAGATTG
* * *
224252 GGAACCAAAAACACATTCTTTTCAATAGGATATGCGACATTAACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
*
224317 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGTATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
224382 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACATAGTCTTCTCGTACAGATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGATACACG
* * *
224447 ATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * * * *
224512 GCCTCAAACGTAACAAACATGGATTCTAGTAGTCATCCTCATTCACGTTGTGATTAGGTAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* * *
224577 AACTTATTCTCCCCCTTAGGATAAATGATAT--G-GA---CGATTTTGCTTGGAAATCTTTTCTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTC-CTTTTGCATGGAAATCTTTTCTT
* * *
224636 TGCCCTACTTTCCTTAAAATCAAAGTTCATTCCATAAATAAGGCAAGCATTGATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
224701 TCTCCACTCTTTTCGAGATTG
454 TCTCCACTCTTTTCGAGATTG
224722 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * *
224787 CATTTCTTTCGACCGTTTTTGATAGAATCAAAATTTGTCTCTTAAATAAGACAAACATTAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
224852 GACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* * * **
224917 ATATTGATGGTTTGGTTTC-TCAAAAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTTA
195 ATATTGATGGTTTGGTTTCGT-AAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
* * * *
224981 TGCCTCAAAACTGACAAATATGGATTCTAGAAATGATCTTCATTCACGTTGTGATTAGGCAGTAT
259 TGCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
*
225046 AAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
324 AAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
225111 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
225176 TCTCCACTCTTTTCGAGATTG
454 TCTCCACTCTTTTCGAGATTG
* *
225197 GGAACCAAAAACACATTCTTTTCAATAGGATAGGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * *
225262 CATTTCTTTCAACCATTTTTTATAGAATCAAAGTTTGTCTCTTAATTAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * * * * *
225327 -ACACCAATCCTTATTCTTTTCTGGATTGGGCACCGTAAACTTAGTCTTCTCATAAGGGTACACA
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
*
225391 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCATTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
225456 GCCTCAAATGTGCCAAGCATGGATTCTAGTAATAATCTTCGTTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
225521 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
225586 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
225651 CTCCACTCTTTTCGAGATTG
455 CTCCACTCTTTTCGAGATTG
* * *
225671 GGAACCAAAAACACATTCCTTTCAATAAGATACGTGACATTGACGCTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* *
225736 CATTTCTTTCAACCGTTTTTGATATAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
*
225801 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* * **
225866 ATATTGATGGTTTGGTTTC-TCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTTA
195 ATATTGATGGTTTGGTTTCGT-AAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
* * * *
225930 TGCCTCAAAACTGACAAATATGGATTCTAGAAATGATCTTCATTCACGTTGTGATTAGGCAGTAT
259 TGCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
*
225995 AAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
324 AAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
*
226060 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTTATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
226125 TCTCCACTCTTTTCGAGATTG
454 TCTCCACTCTTTTCGAGATTG
226146 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * *
226211 CATTTCTTTCGACCGTTTTTGATAGAATCAAAATTTGTCACTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * *
226276 CACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGGTACACA
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
*
226341 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCATTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
226406 GCCTCAAATGTGCCAAGCATGGATTCTAGTAATAATCTTCGTTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
226471 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
*
226536 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCATAAATAAGGCAAGCATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
226601 CTCCACTCTTTTCGAGATTG
455 CTCCACTCTTTTCGAGATTG
226621 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * * *
226686 CATTTCTTTCGACCATTTTTGATAGAATCAAAATTTGTCACTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * *
226751 CACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGGTACACA
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
*
226816 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCATTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
226881 GCCTCAAATGTGCCAAGCATGGATTCTAGTAATAATCTTCGTTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
226946 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
227011 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
227076 CTCCACTCTTTTCGAGATTG
455 CTCCACTCTTTTCGAGATTG
* * * *
227096 GGAACCAAAAACACATTCCTTTTAATAAGATACGTGACATTGACGCTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
*
227161 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
227226 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACATAGTCTTCTCGTACAGATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGATACACG
* * *
227291 ATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
227356 GCCTCAAATGTGCCAAGCATGGATTCTAGTAATAATCTTCGTTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
227421 AACTTATTCTCCTCCTTAGGATAAATGATAT-GGATGATTTCCTTTTGCATGGAAATC-TTTCTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCTT
* * * * *
227484 TGCCCTA-TTTCCTTAAAGTCAAGGTTCTTTCCTTAAATAAGGTAAGCATTAATTCTCATAAAAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
* *
227548 TCTCCACTCTTTTCGAAAATG
454 TCTCCACTCTTTTCGAGATTG
* *
227569 GGAACCAAAAACACATTCTTTTCAATAGGATATGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
*
227634 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAGGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
227699 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACATAGTCTTCTCGTACAGATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGATACACG
* * *
227764 ATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * * * * *
227829 GCCTCAAATGTAACAAACATTGATTCTAGTAGTCATCCTCATTCACGTTGTGATTAGGTAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* * * *
227894 AACTTATTCTCCCCCTTAGGATAAATGATAT--G-GA---CGATTTTGCTTGGAAATCTTTTGTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTC-CTTTTGCATGGAAATCTTTTCTT
* * *
227953 TGCCCTACTTTCCTTAAAATCAAAGTTCATTCCATAAATAAGGCAAGCATTGATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
228018 TCTCCACTCTTTTCGAGATTG
454 TCTCCACTCTTTTCGAGATTG
228039 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * *
228104 CATTTCTTTCGACCGTTTTTGATAGAATCAAAATTTGTCACTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * *
228169 CACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGGTACACA
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
*
228234 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCATTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
228299 GCCTCAAATGTGCCAAGCATGGATTCTAGTAATAATCTTCGTTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
228364 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
228429 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
228494 CTCCACTCTTTTCGAGATTG
455 CTCCACTCTTTTCGAGATTG
* * * *
228514 GGAACCAAAAACACATTCCTTTTAATAAGATACGTGACATTGACGCTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
*
228579 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
*
228644 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* * **
228709 ATATTGATGGTTTGGTTTC-TCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTTA
195 ATATTGATGGTTTGGTTTCGT-AAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
* * * *
228773 TGCCTCAAAACTGACAAATATGGATTCTAGAAATGATCTTCATTCACGTTGTGATTAGGCAGTAT
259 TGCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
*
228838 AAACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
324 AAACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTT
228903 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
228968 TCTCCACTCTTTTCGAGATTG
454 TCTCCACTCTTTTCGAGATTG
* *
228989 GGAACCAAAAACACATTCTTTTCAATAGGATAGGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * * *
229054 CATTTATTTCAACCATTTTTTATAGAATCAAAGTTTGTCTCTTAATTAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * * *
229119 -ACACCAATCCTCATTCTTTTCTGGATTGGGCACCGTAAACTTAGTCTTCTCATAAGGGTACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
* *
229183 ATATTGATGGTTTGGTTTTGCAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * * * * *
229248 GCCTCAATACTGCCAAACATGGATACTAGTAGTAATCTTCATTCATGTTGAGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
229313 AAATTATTCTCCTCCTTAGGATAAATGATAT-GGATGATTTCCTTTTGCATGGAAATC-TTTCTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGG-TGATTTCCTTTTGCATGGAAATCTTTTCTT
* * * *
229376 TGCCCTA-TTTCCTTAAAGTCAAGGTTCTTTCCTTAAATAAGGTAAGCATTAATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
* *
229440 TCTCCACTCTTTTCGAAAATG
454 TCTCCACTCTTTTCGAGATTG
* *
229461 GGAACCAAAAACACATTCTTTTCAATAGGATATGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
229526 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* *
229591 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACATAGTCTTCTCGTACAGATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATA-AGATACACG
* * *
229656 ATATCGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTGAAGTCTACGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * * * * *
229721 GCCTCAAACGTAACAAACATTGATTCTAGTAGTCATCCTCATTCACGTTGTGATTAGGTAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
* * *
229786 AACTTATTCTCCCCCTTAGGATAAATGATAT--G-GA---CGATTTTGCTTGGAAATCTTTTCTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTC-CTTTTGCATGGAAATCTTTTCTT
* * *
229845 TGCCCTACTTTCCTTAAAATCAAAGTTCATTCCATAAATAAGGCAAGCATTGATTCTCATAACAA
389 TGCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAA
*
229910 TCTCCACTCTATTCGAGATTG
454 TCTCCACTCTTTTCGAGATTG
229931 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
* * *
229996 CATTTCTTTCGACCGTTTTTGATAGAATCAAAATTTGTCACTTAAATAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
* * * *
230061 CACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGGGTACACA
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAA-GATACACG
230126 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
195 ATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGT
* * * *
230191 GCCTCAAATGTGCCAAGCATGGATTCTAGTAATAATCTTCGTTCACGTTGTGATTAGGCAGTATA
260 GCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATA
*
230256 AACTTATTCTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
325 AACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTT
230321 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
390 GCCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAAT
230386 CTCCACTCTTTTCGAGATTG
455 CTCCACTCTTTTCGAGATTG
* * * *
230406 GGAACCAAAAACACGTTCCTTTCAATAGGATACGCGACATTGATGCTTTAATATCGCAAGAAAAG
1 GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
*
230471 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAATTAAGACAAACATGAATAGT
66 CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
*
230536 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCGTAAGCATACACG
131 CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAG-ATACACG
* * *
230601 ATATTGATGGTTTGGTTTC-TCAAGAAAGCTTTCTTCCCACCAATTTTGGTAAAGTTTATGTTCA
195 ATATTGATGGTTTGGTTTCGT-AAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCG
* * * *
230665 TGCCTCAAAACTGACAAATATGGATTCTAGAAATGATCTTCATTCACGTTGTGATTAGGCAGTAT
259 TGCCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTAT
230730 AAACTTATTCTCCT
324 AAACTTATTCTCCT
230744 TGTCGTAACG
Statistics
Matches: 19053, Mismatches: 1537, Indels: 278
0.91 0.07 0.01
Matches are distributed among these distances:
467 2 0.00
468 29 0.00
469 59 0.00
470 1199 0.06
471 363 0.02
472 563 0.03
473 1286 0.07
474 3182 0.17
475 11563 0.61
476 803 0.04
477 4 0.00
ACGTcount: A:0.30, C:0.20, G:0.15, T:0.35
Consensus pattern (474 bp):
GGAACCAAAAACACATTCCTTTCAATAGGATACGCGACATTGACGTTTTAATGTCGCAAGAAAAG
CATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
CACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTCATAAGATACACGA
TATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTG
CCTCAAAAGTGACAAACATGGATTCTAGTAATAATCTTCATTCACGTTGTGATTAGGCAGTATAA
ACTTATTCTCCTCCTTAGGATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTG
CCCTATTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATC
TCCACTCTTTTCGAGATTG
Found at i:231685 original size:27 final size:27
Alignment explanation
Indices: 231647--231717 Score: 142
Period size: 27 Copynumber: 2.6 Consensus size: 27
231637 GGTTGAAAAC
231647 GGGGTTGGAGTGTCCCCTCGGAGGAAT
1 GGGGTTGGAGTGTCCCCTCGGAGGAAT
231674 GGGGTTGGAGTGTCCCCTCGGAGGAAT
1 GGGGTTGGAGTGTCCCCTCGGAGGAAT
231701 GGGGTTGGAGTGTCCCC
1 GGGGTTGGAGTGTCCCC
231718 GGTGAATAAA
Statistics
Matches: 44, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
27 44 1.00
ACGTcount: A:0.13, C:0.20, G:0.45, T:0.23
Consensus pattern (27 bp):
GGGGTTGGAGTGTCCCCTCGGAGGAAT
Found at i:233924 original size:52 final size:52
Alignment explanation
Indices: 233859--233987 Score: 213
Period size: 52 Copynumber: 2.5 Consensus size: 52
233849 CGAAATATGA
* *
233859 AAATTTGCATGCATGTATCGATACATTTAATAGCGTATCGATACATCTAGGC
1 AAATTTGCCTGCATGTATCGATACATTTAATAACGTATCGATACATCTAGGC
* * *
233911 AAATTTGCCTGCATGTATCGATACATTTTATAATGTATCGATACATCTGGGC
1 AAATTTGCCTGCATGTATCGATACATTTAATAACGTATCGATACATCTAGGC
233963 AAATTTGCCTGCATGTATCGATACA
1 AAATTTGCCTGCATGTATCGATACA
233988 AAGATCAGTG
Statistics
Matches: 72, Mismatches: 5, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
52 72 1.00
ACGTcount: A:0.31, C:0.18, G:0.17, T:0.34
Consensus pattern (52 bp):
AAATTTGCCTGCATGTATCGATACATTTAATAACGTATCGATACATCTAGGC
Found at i:234000 original size:52 final size:51
Alignment explanation
Indices: 233859--234007 Score: 201
Period size: 52 Copynumber: 2.9 Consensus size: 51
233849 CGAAATATGA
* *
233859 AAATTTGCATGCATGTATCGATACATTTAATAGCGTATCGATACATCTAGGC
1 AAATTTGCCTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTAGGC
* * *
233911 AAATTTGCCTGCATGTATCGATACATTTTATAATGTATCGATACATCTGGGC
1 AAATTTGCCTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTAGGC
*
233963 AAATTTGCCTGCATGTATCGATACA-AAGATCAGTGTATCGATACA
1 AAATTTGCCTGCATGTATCGATACATTA-AT-AGTGTATCGATACA
234008 ATGTATCGAT
Statistics
Matches: 87, Mismatches: 8, Indels: 4
0.88 0.08 0.04
Matches are distributed among these distances:
51 2 0.02
52 85 0.98
ACGTcount: A:0.32, C:0.17, G:0.17, T:0.33
Consensus pattern (51 bp):
AAATTTGCCTGCATGTATCGATACATTAATAGTGTATCGATACATCTAGGC
Found at i:234014 original size:13 final size:13
Alignment explanation
Indices: 233996--234020 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
233986 CAAAGATCAG
233996 TGTATCGATACAA
1 TGTATCGATACAA
234009 TGTATCGATACA
1 TGTATCGATACA
234021 TTTGAGTAAT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:236122 original size:475 final size:475
Alignment explanation
Indices: 234175--239896 Score: 7949
Period size: 475 Copynumber: 12.1 Consensus size: 475
234165 AGTGTCTACA
* *
234175 CTCCTCCTTAGGATAAATGATATACGTGA-TTTCTTTTTGCATGGAAATCATTTCTTTGCCCTAT
1 CTCCTCCTTAGGATAAATGATAT-GGTGATTTTC-TTTTGCATGGAAATCTTTTCTTTGCCCTAT
* *
234239 TTTCCTTAAAATCAAGGTTTATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACT
64 TTTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACT
* * *
234304 CTTTTC-AGGATTGGGAACCAAAAACACATTCTTTTCAATAGGATAGGCAACATTGAC-GTTTTA
129 CTTTTCGA-GATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGACTGCTTTA
* * * *
234367 ATGTCGCAAGAAAAGCATTTCCTTCAACCATTTTTTATAGAATCAAAGTTTGTCTCTTAATTTAA
193 ATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAA-ATAA
* *
234432 GACAAACATGAATAGT-ACACCAATCCTCATTCTTTTCTGGATTAGGCACCGTAAACTTAGTCTT
257 GACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTT
* ** * *
234496 CTGATAAGGGTACACGATATTGATGGTTTGGTTTCGTAAGAAATCTTCCTTCCCACCAATTTTGG
322 CTCATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGG
* * * *
234561 TAAAGCCTATGTTCGTGCCTCAAATGTGCCAAACGTGGATTCTAGTAATGATCTTCATTCACATT
387 TAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTT
*
234626 GTGATTAGGTAGTATAAACTTATT
452 GTGATTAGGCAGTATAAACTTATT
* * * *
234650 CTCCTCCTTAGGATGAATGATATAGATGATTTTCTTTTGCATAGAAATCTTCTCTTTGCCCTATT
1 CTCCTCCTTAGGATAAATGATAT-GGTGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
* * **
234715 TTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCATTGATTCTCATAACAATCGCTGCTC
65 TTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
* * * * ** *
234780 GTTTCAAGATTGGGAACTAAAAACACATTCCTTTCAATAGGATAGGCGGCATTCAC-GCTTTAAT
130 TTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGACTGCTTTAAT
* *
234844 GTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAAAC
195 GTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * *
234909 AAACATGAATAGTCACACTAATCCTCATTCTTTTCTGTATTAGGCACCATAAACTTACTTTTCTC
260 AAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTC
* * *
234974 ATAAGCATACACGATATTGAAGCTTTAGCTTT-GTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
325 ATAAGCATACACGATATTGATGGTTT-GGTTTCGTAAGAAA-GCTTTCTTCCCACCAATTTTGGT
* * * *
235038 AAAGTCAATGTTCGTGCCTCAAATGTGACAGACATGGATTGTAGTAATAATCTTCATTCACGTTG
388 AAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTG
* * *
235103 TGATTAGGCACTATGAACATATT
453 TGATTAGGCAGTATAAACTTATT
* * *
235126 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATT
1 CTCCTCCTTAGGATAAATGATA-TGGTGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
* * * * * * *
235191 TTCCATAACATCAATA-TTC-TTCCCTTAAAAAAGGCAAGCGTTGATTCTCGTAATAGTCTCCAC
65 TTCCTTAAAATCAA-AGTTCATT-CCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * * ***** *
235254 TTTTTTCAACATTGGGAACCAAAAACACATTCCTTTCATTAGGATATATGGCATTGA-TGCTTTG
128 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGACTGCTTTA
* * * * * * * * * *
235318 GTG-CTGTAA-AAAAGCATTTCTATCAGCGGTTTTTTATAGTACCAATGTTTGCCTC-T---TAA
193 ATGTC-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAA
* * *
235377 GACAAACAGGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTGTT
257 GACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTT
* * * *
235442 CTCATAATG-ATACATGATATTGATGCTTTGGTTTTGCAAGAAAGCTTTTCTTCCCACCAATTTT
322 CTCATAA-GCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGC-TTTCTTCCCACCAATTTT
* * * * * * *
235506 GGAAAAGTCTATGTTCGTGCTTCAAATGTGACAAACATGGATTGTGGTAACGATCTTCATTAACA
385 GGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACG
* ** *
235571 TTGTGATTAGGCACTACGAACATATT
450 TTGTGATTAGGCAGTATAAACTTATT
* * * *
235597 CTCCTCATTAGGATAAATGATGTGGATGATTTTCTTTTGCATGCAAATCTTTTCTTTGCCCTACT
1 CTCCTCCTTAGGATAAATGATATGG-TGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
* *
235662 TTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCACTC
65 TTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
* *
235727 TTTTCGAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACACAACATTGACTG-TTTAAT
130 TTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGACTGCTTTAAT
* * * * * *
235791 GTCGCATGAAAGGCATTTCTTCCAACTGTTTTTGATAGAATCAAAGTCTGTCTCCTAAATAAGAC
195 GTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* *
235856 AAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTC
260 AAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTC
235921 ATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAA
325 ATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAA
* * *
235986 AGTCTATTTTCGTGCCTCAAATGTGACAAACATAGATTCTAGCAATGATCTTCATTCACGTTGTG
390 AGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTG
236051 ATTAGGCAGTATAAACTTATT
455 ATTAGGCAGTATAAACTTATT
* * * *
236072 CTCCTCCTTAGCATAAATGATATAGGTGATTTCCATTTACATGGAAATCTTTTCTTTGCCCTATT
1 CTCCTCCTTAGGATAAATGATAT-GGTGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
* *
236137 TTCCTT-AAATCAAGGTTTATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
65 TTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
** * * *
236201 TTTTCGAGATTAAGAACCAAAAACACATTCCCTTCAATAGGGTACGCGACATTGACAT--TTTAA
130 TTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGAC-TGCTTTAA
* *
236264 TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATCAAAGTTTGTCTCTTGAATAAGA
194 TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * * *
236329 CAAACATTAATAGTCACACTAATCCTCATTC-TTCCTGGATTAGGCACAATAAACTTAGTCTTTT
259 CAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * *
236393 CATGAGGATACACGATATTGACGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTAGTA
324 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTA
* * * *
236458 TAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCAATCATGTTGT
389 AAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGT
*
236523 AATTAGGCAGTATAAACTTATT
454 GATTAGGCAGTATAAACTTATT
* * *
236545 CTCCTCCTTAGGATAAATGATATGGATGATTTT-TTTTGAATGCAAATCTTTTCTTTGCGCTATT
1 CTCCTCCTTAGGATAAATGATATGG-TGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
*
236609 TTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
65 TTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
* *
236674 TTTTCGAGATTGGGAACTAAAAACACATTCCTTTCAATAGGATACGCAGCATTGA-TGCTTTAAT
130 TTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGACTGCTTTAAT
* ** *
236738 GTAGCAAGAAAAGCATTTCTTTCAACTATTTTTGATAGAATCAAAGTTTGTCTCATAAATAAGAC
195 GTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * * *
236803 AAACATGGATAGTCACACTAATCCTCATTCTTTTCTGTATTAGGCACCATAAACTTACTTTTCTC
260 AAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTC
* * * * **
236868 ATAAGCATACATGATATTGAAGCTGTAGCATT-GTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
325 ATAAGCATACACGATATTGATGGT-TTGGTTTCGTAAGAAA-GCTTTCTTCCCACCAATTTTGGT
* * *
236932 AAAGTCTACGTTCGTGCCTCAAATGTGACAAACATGGATTGTAGTAATAATCTTCATTCACGTTG
388 AAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTG
* * *
236997 TGATTAGGCACTATGAACATATT
453 TGATTAGGCAGTATAAACTTATT
* * *
237020 CTCCTCATTAGGATAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
1 CTCCTCCTTAGGATAAATGATA-TGGTGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
* *
237085 TTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGGATTGATTCTCATAACAATCTCCACTC
65 TTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
* *
237150 TTTTCGAGATTGGGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACAT--TTTAA
130 TTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGAC-TGCTTTAA
*
237213 TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTCAAATAAGA
194 TGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
237278 TAAACATGAATAGTCACACTAATCCTCCTTCTTTTCTGGATTGGGCACCATAAACTTAGTCTTCT
259 CAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCT
** *
237343 CATAAGGGTACACGATATTGATGGTTTGATTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTA
324 CATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTA
*
237408 AAG-CTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTG
389 AAGTC-TATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTG
* *
237472 TGATTGGGCAGTATAAAATTATT
453 TGATTAGGCAGTATAAACTTATT
* * *
237495 CTCCTCCTTAGGATAAATGATGTGGATGATTTTCTTTTGCATAGAAATCTTCTCTTTGCCCTATT
1 CTCCTCCTTAGGATAAATGATATGG-TGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
* * ***
237560 TTCCTTAAAATCGAAGTTCATTCCTTAGATAAGGCAAGCATTGATTCTCATAACAATCTTTGCTC
65 TTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
* * * *
237625 TTTTCAAGATTGGGAACTAAAAACACATTCCTTTCAATAGGATATGCAGCATTGAC-GCTTTAAT
130 TTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGACTGCTTTAAT
* *
237689 GTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAG
195 GTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * * *
237754 AAACATGAATAGTCGCACTAATCCTCATTCTTTTCTGTATTAGGCACCATAAACTTACTTTTCTC
260 AAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTC
* * *
237819 ATAAGCATACACGATATTGAAGCTTTAGCTTT-GTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
325 ATAAGCATACACGATATTGATGGTTT-GGTTTCGTAAGAAA-GCTTTCTTCCCACCAATTTTGGT
*
237883 AAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCATTCACGTTG
388 AAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTG
*
237948 TGATTAGGTAGTATAAACTTATT
453 TGATTAGGCAGTATAAACTTATT
* *
237971 CTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
1 CTCCTCCTTAGGATAAATGATAT-GGTGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
*
238036 TTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
65 TTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
* * * * *
238101 TTTTCGAGATTGGGAACCAAAAACACATTCTTTTCAATAGGATATGCGACTTTGAC-GTTTTAAT
130 TTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGACTGCTTTAAT
*
238165 GTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAATTTGTCTCTTAAATAAGAC
195 GTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * *
238230 AAACATTAATAGTCACACTAATCCTCCTTCTTTTCTGGATTGGGCACCATAAACTTAGTCTTCTC
260 AAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTC
** *
238295 ATAAGGGTACACGATATTGATGGTTTGATTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAA
325 ATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAA
*
238360 AG-CTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTGT
390 AGTC-TATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGT
* *
238424 GATTGGGCAGTATAAAATTATT
454 GATTAGGCAGTATAAACTTATT
* * *
238446 CTCCTCCTTAGGATAAATGATGTGGATGATTTTCTTTTGCATAGAAATCTTCTCTTTGCCCTATT
1 CTCCTCCTTAGGATAAATGATATGG-TGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
* *
238511 TTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCATTGATTCTCATAACAATCTTCACTC
65 TTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
* ** * **
238576 TTTTCAAGATTGGGAACTGAAAACACATT-TTTTCAATAGGATACGCGGCATTGAC-GCTTTAAT
130 TTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGACTGCTTTAAT
* * *
238639 GTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATCAAAGGTTGTCTCTTAAATAAGAG
195 GTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * * *
238704 AAACATGAATAGTCGCACTAATCCTCATTCTTTTCTGTATTAGGCACCATAAACTTACTTTTCTC
260 AAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTC
* * *
238769 ATAAGCATACACGATATTGAAGCTTTAGCTTT-GTAAGAAAGGCTTTCTTCCCACCAATTTTGGT
325 ATAAGCATACACGATATTGATGGTTT-GGTTTCGTAAGAAA-GCTTTCTTCCCACCAATTTTGGT
* * * *
238833 AAAGTTTATGTTCGTGCCTCAAATGTGACAAACATGGATTGTAGTAATAAATCTTCGTTCACGTT
388 AAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAAT-GATCTTCATTCACGTT
* * ** *
238898 GTGGTTAGGCACTACGAACATATT
452 GTGATTAGGCAGTATAAACTTATT
* *
238922 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
1 CTCCTCCTTAGGATAAATGATA-TGGTGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
* * ** *
238987 TTCCTTAACATCAATA-TTC-TTCCCTTAAAAAAGGCAAGCATTGATTCTCGCAACAGTCTCCAC
65 TTCCTTAAAATCAA-AGTTCATT-CCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* * * ** * * * *
239050 TCTTTTCAAGGTTGGGAACCCAAAACATTTTTCTTTCATTAGGATTCACAACATTGACTG-TTTA
128 TCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGACTGCTTTA
* * ** *
239114 ATGTCGCAAGAAAAGCATTTTTTTCAACCGTTTTTGATAGAATCAATGTTCATCTTTTAAATAAG
193 ATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * * * *
239179 ACAAACATAAACAGTCACACTAATCCTCATTCTTTTTTAGATTAGGTACTATAAACTTAGTCTTC
258 ACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTC
* * *
239244 TCATAATG-ATACACGATATTGATGGTTTGGTTTTGTAAGAAACCTTCCTTCCCACCAATTTTGG
323 TCATAA-GCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGG
* * * * * * *
239308 TAAAGTCTATGTTCGTGCGTCAAAAGTGCCAAACATGGATACCAGTAGTAATCTTCATTCACGTT
387 TAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTT
* *
239373 GAGATTAGGCAGTATAAAATTATT
452 GTGATTAGGCAGTATAAACTTATT
* * *
239397 CTCCTCCTTAGGATAAATGATATGAATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCATACT
1 CTCCTCCTTAGGATAAATGATATG-GTGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
* *
239462 TTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCACAACAATCTCCACTC
65 TTCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
* * * * *
239527 TTTTCGAGATTAGGAACCAAAAACACATTCCTTTCATTAGGCTACACAACGTTGACTG-TTTAAT
130 TTTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGACTGCTTTAAT
* * * * * * * *
239591 GTCGCATGGAAGGCATTTCTTCCAACCGTTTTTTATGGAATCAAAGTCTGTCTCCTAAATAAGAC
195 GTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* *
239656 AAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTCTTCTC
260 AAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTC
239721 ATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAA
325 ATAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAA
*
239786 AGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTAATGATCTTCATTCACGTTGTG
390 AGTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTG
*
239851 ATTAGGCAGTGTAAACTTATT
455 ATTAGGCAGTATAAACTTATT
239872 CTCCTCCTTAGGATAAATGATATGG
1 CTCCTCCTTAGGATAAATGATATGG
239897 ATGAAACCAA
Statistics
Matches: 4650, Mismatches: 533, Indels: 129
0.88 0.10 0.02
Matches are distributed among these distances:
470 9 0.00
471 359 0.08
472 75 0.02
473 393 0.08
474 458 0.10
475 1845 0.40
476 1332 0.29
477 176 0.04
478 3 0.00
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (475 bp):
CTCCTCCTTAGGATAAATGATATGGTGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTT
TCCTTAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTCT
TTTCGAGATTGGGAACCAAAAACACATTCCTTTCAATAGGATACGCAACATTGACTGCTTTAATG
TCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
AACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCA
TAAGCATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAA
GTCTATGTTCGTGCCTCAAATGTGACAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGA
TTAGGCAGTATAAACTTATT
Found at i:237750 original size:951 final size:951
Alignment explanation
Indices: 234175--239900 Score: 8450
Period size: 951 Copynumber: 6.0 Consensus size: 951
234165 AGTGTCTACA
* *
234175 CTCCTCCTTAGGATAAATGATATACG-TGA-TTTCTTTTTGCATGGAAATCATTTCTTTGCCCTA
1 CTCCTCCTTAGGATAAATGATAT-TGATGATTTTC-TTTTGCATGGAAATCTTTTCTTTGCCCTA
*
234238 TTTTCCTTAAAATCAAGGTTTATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
64 TTTTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCAC
* *
234303 TCTTTTC-AGGATTGGGAACCAAAAACACATTCTTTTCAATAGGATAGGCAACATTGACGTTTTA
129 TCTTTTCGA-GATTGGGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACGTTTTA
* * * *
234367 ATGTCGCAAGAAAAGCATTTCCTTCAACCATTTTTTATAGAATCAAAGTTTGTCTCTTAATTTAA
193 ATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAA-ATAA
* *
234432 GACAAACATGAATAGT-ACACCAATCCTCATTCTTTTCTGGATTAGGCACCGTAAACTTAGTCTT
257 GACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTT
* * *
234496 CTGATAAGGGTACACGATATTGATGGTTTGGTTTCGTAAGAAATCTTCCTTCCCACCAATTTTGG
322 CTCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGG
* * *
234561 TAAAGCCTATGTTCGTGCCTCAAATGTGCCAAACGTGGATTCTAGTAATGATCTTCATTCACATT
387 TAAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTT
* * * *
234626 GTGATTAGGTAGTATAAACTTATTCTCCTCCTTAGGATGAATGATATAGATGATTTTCTTTTGCA
452 GTGATTAGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
234691 TAGAAATCTTCTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCAT
517 TAGAAATCTTCTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCAT
* ** *
234756 TGATTCTCATAACAATCGCTGCTCGTTTCAAGATTGGGAACTAAAAACACATTCCTTTCAATAGG
582 TGATTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACTAAAAACACATTCCTTTCAATAGG
* * *
234821 ATAGGCGGCATTCACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATC
647 ATACGCAGCATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATC
*
234886 AAAGTTTGTCTCTTAAATAAAACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGTATTA
712 AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGTATTA
234951 GGCACCATAAACTTACTTTTCTCATAAGCATACACGATATTGAAGCTTTAGCTTTGTAAGAAAGG
777 GGCACCATAAACTTACTTTTCTCATAAGCATACACGATATTGAAGCTTTAGCTTTGTAAGAAAGG
* * * *
235016 CTTTCTTCCCACCAATTTTGGTAAAGTCAATGTTCGTGCCTCAAATGTGACAGACATGGATTGTA
842 CTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTA
*
235081 GTAATAATCTTCATTCACGTTGTGATTAGGCACTATGAACATATT
907 GTAATAATCTTCATTCACGTTGTGATTAGGCACTATAAACATATT
* *
235126 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATT
1 CTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
* * ** * * * * *
235191 TTCCATAACATCAATATTC-TTCCCTTAAAAAAGGCAAGCGTTGATTCTCGTAATAGTCTCCACT
66 TTCCTTAAAATCAAGGTTCATT-CCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACT
* * * * * *** * * * **
235255 TTTTTCAACATTGGGAACCAAAAACACATTCCTTTCATTAGGATATATGGCATTGATGCTTTGGT
130 CTTTTCGAGATTGGGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAAT
* * * * * * * * *
235320 G-CTGTAA-AAAAGCATTTCTATCAGCGGTTTTTTATAGTACCAATGTTTGCCTC-T---TAAGA
195 GTC-GCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
* * *
235379 CAAACAGGAATAGTCACACTAATCCTCATTCTTTTTTGGATTAGGCACCATAAACTTAGTGTTCT
259 CAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCT
* * * * * * *
235444 CATAATGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGCTTTTCTTCCCACCAATTTTGGA
324 CATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGC-TTCCTTCCCACCAATTTTGGT
* * * * * * *
235509 AAAGTCTATGTTCGTGCTTCAAATGTGACAAACATGGATTGTGGTAACGATCTTCATTAACATTG
388 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTG
* * * * *
235574 TGATTAGGCACTACGAACA-TATTCTCCTCATTAGGATAAATGATGTGGATGATTTTCTTTTGCA
453 TGATTAGGCAGTA-TAAAATTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCA
* * * *
235638 T-GCAAATCTTTTCTTTGCCCTACTTTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCA
517 TAG-AAATCTTCTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCA
* * * *
235702 TTGATTCTCACAACAATCTCCACTCTTTTCGAGATTGGGAACCAAAAACACATTCCTTTCATTAG
581 TTGATTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACTAAAAACACATTCCTTTCAATAG
* * * * * **
235767 GATACACAACATTGACTG-TTTAATGTCGCATGAAAGGCATTTCTTCCAACTGTTTTTGATAGAA
646 GATACGCAGCATTGAC-GCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAA
* * * * *
235831 TCAAAGTCTGTCTCCTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGAT
710 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGTAT
* * * * *
235896 TAGGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTT-GGTTTCGTAAGAA
775 TAGGCACCATAAACTTACTTTTCTCATAAGCATACACGATATTGAAGCTTTAGCTTT-GTAAGAA
*
235960 A-GCTTTCTTCCCACCAATTTTGGTAAAGTCTATTTTCGTGCCTCAAATGTGACAAACATAGATT
839 AGGCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATT
* * * *
236024 CTAGCAATGATCTTCATTCACGTTGTGATTAGGCAGTATAAACTTATT
904 CTAGTAATAATCTTCATTCACGTTGTGATTAGGCACTATAAACATATT
* * * * * *
236072 CTCCTCCTTAGCATAAATGATATAGGTGATTTCCATTTACATGGAAATCTTTTCTTTGCCCTATT
1 CTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
*
236137 TTCCTT-AAATCAAGGTTTATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
66 TTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
** ** * *
236201 TTTTCGAGATTAAGAACCAAAAACACATTCCCTTCAATAGGGTACGCGACATTGACATTTTAATG
131 TTTTCGAGATTGGGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATG
* *
236266 TCGCAAGAAAAGCATTTCTTTCAACCGTTTTTTATAGAATCAAAGTTTGTCTCTTGAATAAGACA
196 TCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* * * *
236331 AACATTAATAGTCACACTAATCCTCATTC-TTCCTGGATTAGGCACAATAAACTTAGTCTTTTCA
261 AACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCA
* * * *
236395 TGAGGATACACGATATTGACGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTAGTATA
326 TAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAA
* * *
236460 GTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCAATCATGTTGTAA
391 GTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGA
* *
236525 TTAGGCAGTATAAACTTATTCTCCTCCTTAGGATAAATGATATGGATGATTTT-TTTTGAAT-GC
456 TTAGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATAG-
* *
236588 AAATCTTTTCTTTGCGCTATTTTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCATTGA
520 AAATCTTCTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCATTGA
*
236653 TTCTCATAACAATCTCCACTCTTTTCGAGATTGGGAACTAAAAACACATTCCTTTCAATAGGATA
585 TTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACTAAAAACACATTCCTTTCAATAGGATA
* * *
236718 CGCAGCATTGATGCTTTAATGTAGCAAGAAAAGCATTTCTTTCAACTATTTTTGATAGAATCAAA
650 CGCAGCATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATCAAA
* *
236783 GTTTGTCTCATAAATAAGACAAACATGGATAGTCACACTAATCCTCATTCTTTTCTGTATTAGGC
715 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGTATTAGGC
* * *
236848 ACCATAAACTTACTTTTCTCATAAGCATACATGATATTGAAGCTGTAGCATTGTAAGAAAGGCTT
780 ACCATAAACTTACTTTTCTCATAAGCATACACGATATTGAAGCTTTAGCTTTGTAAGAAAGGCTT
* * *
236913 TCTTCCCACCAATTTTGGTAAAGTCTACGTTCGTGCCTCAAATGTGACAAACATGGATTGTAGTA
845 TCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTA
*
236978 ATAATCTTCATTCACGTTGTGATTAGGCACTATGAACATATT
910 ATAATCTTCATTCACGTTGTGATTAGGCACTATAAACATATT
* *
237020 CTCCTCATTAGGATAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
1 CTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
*
237085 TTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGGATTGATTCTCATAACAATCTCCACTC
66 TTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
*
237150 TTTTCGAGATTGGGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACATTTTAATG
131 TTTTCGAGATTGGGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATG
* *
237215 TCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTCAAATAAGATA
196 TCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* *
237280 AACATGAATAGTCACACTAATCCTCCTTCTTTTCTGGATTGGGCACCATAAACTTAGTCTTCTCA
261 AACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCA
* * *
237345 TAAGGGTACACGATATTGATGGTTTGATTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAA
326 TAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAA
237410 G-CTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTG
391 GTC-TATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTG
* *
237474 ATTGGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATGTGGATGATTTTCTTTTGCATAG
455 ATTAGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATAG
*
237539 AAATCTTCTCTTTGCCCTATTTTCCTTAAAATCGAAGTTCATTCCTTAGATAAGGCAAGCATTGA
520 AAATCTTCTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCATTGA
***
237604 TTCTCATAACAATCTTTGCTCTTTTCAAGATTGGGAACTAAAAACACATTCCTTTCAATAGGATA
585 TTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACTAAAAACACATTCCTTTCAATAGGATA
*
237669 TGCAGCATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATCAAA
650 CGCAGCATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATCAAA
* *
237734 GTTTGTCTCTTAAATAAGAGAAACATGAATAGTCGCACTAATCCTCATTCTTTTCTGTATTAGGC
715 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGTATTAGGC
237799 ACCATAAACTTACTTTTCTCATAAGCATACACGATATTGAAGCTTTAGCTTTGTAAGAAAGGCTT
780 ACCATAAACTTACTTTTCTCATAAGCATACACGATATTGAAGCTTTAGCTTTGTAAGAAAGGCTT
237864 TCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTA
845 TCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTA
* * * *
237929 ATGATCTTCATTCACGTTGTGATTAGGTAGTATAAACTTATT
910 ATAATCTTCATTCACGTTGTGATTAGGCACTATAAACATATT
* * * *
237971 CTCCTCCTTAGCATAAATGATATAGGTGATTTCCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
1 CTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
238036 TTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
66 TTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
* *
238101 TTTTCGAGATTGGGAACCAAAAACACATTCTTTTCAATAGGATATGCGACTTTGACGTTTTAATG
131 TTTTCGAGATTGGGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATG
*
238166 TCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAATTTGTCTCTTAAATAAGACA
196 TCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* * *
238231 AACATTAATAGTCACACTAATCCTCCTTCTTTTCTGGATTGGGCACCATAAACTTAGTCTTCTCA
261 AACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCA
* * *
238296 TAAGGGTACACGATATTGATGGTTTGATTTCGTAAGAAAGCTTTCTTCCCACCAATTTTGGTAAA
326 TAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAA
238361 G-CTTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTG
391 GTC-TATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTG
* *
238425 ATTGGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATGTGGATGATTTTCTTTTGCATAG
455 ATTAGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATAG
238490 AAATCTTCTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCATTGA
520 AAATCTTCTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCATTGA
* * *
238555 TTCTCATAACAATCTTCACTCTTTTCAAGATTGGGAACTGAAAACACATT-TTTTCAATAGGATA
585 TTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACTAAAAACACATTCCTTTCAATAGGATA
*
238619 CGCGGCATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATCAAA
650 CGCAGCATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATCAAA
* * *
238684 GGTTGTCTCTTAAATAAGAGAAACATGAATAGTCGCACTAATCCTCATTCTTTTCTGTATTAGGC
715 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGTATTAGGC
238749 ACCATAAACTTACTTTTCTCATAAGCATACACGATATTGAAGCTTTAGCTTTGTAAGAAAGGCTT
780 ACCATAAACTTACTTTTCTCATAAGCATACACGATATTGAAGCTTTAGCTTTGTAAGAAAGGCTT
* * *
238814 TCTTCCCACCAATTTTGGTAAAGTTTATGTTCGTGCCTCAAATGTGACAAACATGGATTGTAGTA
845 TCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTA
* * **
238879 ATAAATCTTCGTTCACGTTGTGGTTAGGCACTACGAACATATT
910 AT-AATCTTCATTCACGTTGTGATTAGGCACTATAAACATATT
*
238922 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
1 CTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
* ** * ** *
238987 TTCCTTAACATCAATATTC-TTCCCTTAAAAAAGGCAAGCATTGATTCTCGCAACAGTCTCCACT
66 TTCCTTAAAATCAAGGTTCATT-CCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACT
* * * * * * * * *
239051 CTTTTCAAGGTTGGGAACCCAAAACA-TTTTTCTTTCATTAGGATTCACAACATTGAC-TGTTTA
130 CTTTTCGAGATTGGGAACCAAAAACACATTCT-TTTCAATAGGATACGCGACATTGACGT-TTTA
* * ** *
239114 ATGTCGCAAGAAAAGCATTTTTTTCAACCGTTTTTGATAGAATCAATGTTCATCTTTTAAATAAG
193 ATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
* * * * * *
239179 ACAAACATAAACAGTCACACTAATCCTCATTCTTTTTTAGATTAGGTACTATAAACTTAGTCTTC
258 ACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTC
* * *
239244 TCATAATGATACACGATATTGATGGTTTGGTTTTGTAAGAAACCTTCCTTCCCACCAATTTTGGT
323 TCATAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGT
* * * * * *
239309 AAAGTCTATGTTCGTGCGTCAAAAGTGCCAAACATGGATACCAGTAGTAATCTTCATTCACGTTG
388 AAAGTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTG
* *
239374 AGATTAGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATATGAATGATTTTCTTTTGCAT
453 TGATTAGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCAT
* * * * * *
239439 GGAAATCTTTTCTTTGCCATACTTTCCATAAAATCAAAGTTCATTCCTTAAATAAGGCAAGCATT
518 AGAAATCTTCTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCATT
* * * * * *
239504 GATTCTCACAACAATCTCCACTCTTTTCGAGATTAGGAACCAAAAACACATTCCTTTCATTAGGC
583 GATTCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACTAAAAACACATTCCTTTCAATAGGA
* * * * * * * * * *
239569 TACACAACGTTGACTG-TTTAATGTCGCATGGAAGGCATTTCTTCCAACCGTTTTTTATGGAATC
648 TACGCAGCATTGAC-GCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATC
* * * * *
239633 AAAGTCTGTCTCCTAAATAAGACAAACATGAATAGTCACACAAATCCTCATTCTTTTTTGGATTA
712 AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGTATTA
* * * * *
239698 GGCACCATAAACTTAGTCTTCTCATAAGCATACACGATATTGATGGTTT-GGTTTCGTAAGAAA-
777 GGCACCATAAACTTACTTTTCTCATAAGCATACACGATATTGAAGCTTTAGCTTT-GTAAGAAAG
239761 GCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCT
841 GCTTTCTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCT
* * * *
239826 AGTAATGATCTTCATTCACGTTGTGATTAGGCAGTGTAAACTTATT
906 AGTAATAATCTTCATTCACGTTGTGATTAGGCACTATAAACATATT
*
239872 CTCCTCCTTAGGATAAATGATATGGATGA
1 CTCCTCCTTAGGATAAATGATATTGATGA
239901 AACCAAAGCA
Statistics
Matches: 4309, Mismatches: 431, Indels: 71
0.90 0.09 0.01
Matches are distributed among these distances:
945 115 0.03
946 292 0.07
947 706 0.16
948 290 0.07
949 270 0.06
950 608 0.14
951 1850 0.43
952 177 0.04
953 1 0.00
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (951 bp):
CTCCTCCTTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
TTCCTTAAAATCAAGGTTCATTCCTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCCACTC
TTTTCGAGATTGGGAACCAAAAACACATTCTTTTCAATAGGATACGCGACATTGACGTTTTAATG
TCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
AACATGAATAGTCACACTAATCCTCATTCTTTTCTGGATTAGGCACCATAAACTTAGTCTTCTCA
TAAGGATACACGATATTGATGGTTTGGTTTCGTAAGAAAGCTTCCTTCCCACCAATTTTGGTAAA
GTCTATGTTCGTGCCTCAAATGTGCCAAACATGGATTCTAGTAATGATCTTCATTCACGTTGTGA
TTAGGCAGTATAAAATTATTCTCCTCCTTAGGATAAATGATATGGATGATTTTCTTTTGCATAGA
AATCTTCTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATTCCTTAGATAAGGCAAGCATTGAT
TCTCATAACAATCTCCACTCTTTTCAAGATTGGGAACTAAAAACACATTCCTTTCAATAGGATAC
GCAGCATTGACGCTTTAATGTCGCAAGAAAAGCATTTCTTTCAACCATTTTTGATAGAATCAAAG
TTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATCCTCATTCTTTTCTGTATTAGGCA
CCATAAACTTACTTTTCTCATAAGCATACACGATATTGAAGCTTTAGCTTTGTAAGAAAGGCTTT
CTTCCCACCAATTTTGGTAAAGTCTATGTTCGTGCCTCAAATGTGACAAACATAGATTCTAGTAA
TAATCTTCATTCACGTTGTGATTAGGCACTATAAACATATT
Found at i:240920 original size:308 final size:306
Alignment explanation
Indices: 240346--240959 Score: 783
Period size: 308 Copynumber: 2.0 Consensus size: 306
240336 GATTCTATCA
* *
240346 AAAATGGTTGAAAGAAATGCTTTTCTTGCGACCCCAAAGAGTCAATGTCATGTATCCTAATTAAA
1 AAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGAGTCAATGTCATGTATCCTAATTAAA
* * * * * *
240411 AGAATGTGTTTTTGGTTCCTAGTCATGAAAAAAAATGGAGACTGTTATAAGAATTAATGCTTGCC
66 AGAATGTGATTTTGGTTCCCAGTCATGAAAAAAAATAGAGACTGTTACAAGAATGAATACTTGCC
* ** * * * * *
240476 TTATTTAAAGGTTGAATTTTGATTTTAAGGAAAAATGCCAAAGAAAAGATTTCCATGTAAGAGAA
131 TTATTTAAAGGATGAACATTGATTTTAAGGAAAAAGGCAAAAAAAAAGATTTACATGAAAGAGAA
* * * *
240541 AATCATCAATATCGTTTATCCTAATAAGGAGTATCTGTTTATAGTGCCTAATCACAAAGTGAATG
196 AATCATCAATATCATTTATCCTAATAAGGAGAATCTGTTTATAGCGCCTAATCACAAAATGAATG
*
240606 AAGATCATTTCTAGAATCCATGTTTGTCACAATTAAGGCACAAACT
261 AAGATCATTACTAGAATCCATGTTTGTCACAATTAAGGCACAAACT
* *
240652 AAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAATGCA-TCAATGTCATGTATCGTAA-TAG
1 AAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAG-AGTCAATGTCATGTATCCTAATTA-
* * ** *
240715 AAGGAATGTGATTTTGGTTCCCAGTCTTG-AAATGAATAGAGACTGTTACGAGAATCGAA-ACTT
64 AAAGAATGTGATTTTGGTTCCCAGTCATGAAAAAAAATAGAGACTGTTACAAGAAT-GAATACTT
240778 GCCTTATTTAAAGGATGAACATTGATATTT-AGGAAAATAGGGCAAAAAAAAAAGATTTACATGC
128 GCCTTATTTAAAGGATGAACATTGAT-TTTAAGGAAAA-A-GGC-AAAAAAAAAGATTTACATG-
* * * *
240842 AAAG-GAAAATCATCCATGTCATTTATCCTAATGAA-GAGAATGTGTTTATCGCGCCTAATCACA
188 AAAGAGAAAATCATCAATATCATTTATCCTAAT-AAGGAGAATCTGTTTATAGCGCCTAATCACA
* * *
240905 AAATGAGTGAAGATCATTACTGGAGTCCATGTTTGTCACAATTAAGGCACAAACT
252 AAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTAAGGCACAAACT
240960 TAGGCTTTAC
Statistics
Matches: 264, Mismatches: 35, Indels: 16
0.84 0.11 0.05
Matches are distributed among these distances:
305 56 0.21
306 85 0.32
307 3 0.01
308 115 0.44
309 5 0.02
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.30
Consensus pattern (306 bp):
AAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGAGTCAATGTCATGTATCCTAATTAAA
AGAATGTGATTTTGGTTCCCAGTCATGAAAAAAAATAGAGACTGTTACAAGAATGAATACTTGCC
TTATTTAAAGGATGAACATTGATTTTAAGGAAAAAGGCAAAAAAAAAGATTTACATGAAAGAGAA
AATCATCAATATCATTTATCCTAATAAGGAGAATCTGTTTATAGCGCCTAATCACAAAATGAATG
AAGATCATTACTAGAATCCATGTTTGTCACAATTAAGGCACAAACT
Found at i:245918 original size:475 final size:475
Alignment explanation
Indices: 240652--245916 Score: 5432
Period size: 475 Copynumber: 11.0 Consensus size: 475
240642 GGCACAAACT
* * * *
240652 AAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAATGCATCAATGTCATGTATCGTAAT-AGA
1 AAAACGATTGAAAGAAATGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA-A
* * * * * *
240716 AGGAATGTGATTTTGGTTCCCAGTCTTGAAATGAATAGAGACTGTTACGAGAATCGAA-ACTTGC
65 AGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATC-AATGCTTGC
* * * * *
240780 CTTATTTAAAGGATGAACATTGATATTTAGGAAAATAGGGCAAAAAAAAAAGATTTACATGCAAA
129 CATATTTAAGGGATGAACTTTGAT-TTTAGGAAAATAGGGC--AAAGAAAAGATTTCCATGCAAA
* * * * * * *
240845 GGAAAATCATCCATGTCATTTATCCTAATGAAGAGAATGTGTTTATCGCGCCTAATCACAAAATG
191 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTG
* * * * * *
240910 AGTGAAGATCATTACTGGAGTCCATGTTTGTCACAATTAAGGCACAAACTTAGGCTTTACAAAAA
256 AATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAA
* * * * * *
240975 TTGGTGGGCAGAAAGCCCTTCTTACGAAACTAATGCTTCAATATCGTGTATCCTTATTAGAAGAC
321 TTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGAC
* * *
241040 TAAGTTTATAGTGCCCT-AT-CTTATGAAGAATGGGGATTAGTATGA-TCATTCATGTTTGTCTT
386 TAAGTTTATGGTG-CCTAATCCTGA-AAAGAATGGGGATTAGTATGACT-ATTCATGTTTGTCTT
*
241102 ATTTAAGAGACAAACTTTGATTCTTTCA
448 ATTTAAGAGACAAACTTTGATTCTATCA
* * * * ** *
241130 AAAATGATTGAAAGAAATGC-TTTCCTTGCGACACCAATGCGTC-ATTTCATGTATTATAATAAA
1 AAAACGATTGAAAGAAATGCATTT-CTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* *
241193 AGGAATGTGATTTTGGTTCCCAATCTTGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
65 AGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * * * * ** **
241258 TTAATTAAAGGATGAACATTGATTTTTAGGAAAATAGGGCCAAAAAAAAGATTTACATGTGAGGG
130 ATATTTAAGGGATGAACTTTGA-TTTTAGGAAAATAGGG-CAAAGAAAAGATTTCCATGCAAAAG
* * * * *
241323 AAAATCATCCATATCATTTATCCTAATGAGGAAAATGTGTTTATTA-TGCC-ATTCGCAAAATGA
193 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAGTGA
* ** *
241386 ATGAAGATCATTACTGGAATCCATGTTTGTCACAATTGAGGCATAAACTTAGGCTTTACAAAAAT
257 ATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAAT
* * ** * * **
241451 TGGTGGGAAGAAAGCCCTTCTTATGAAACCAGTGCTTCAATATCGTGTATCTTTATTTGAAGACT
322 TGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACT
* * * * *
241516 AAGTTTTTGGTGCCCT-ATCCTGAGAAA-AATGGGGATTAGTATGATTATTCATATTTATCTCAT
387 AAGTTTATGGTG-CCTAATCCTGA-AAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTAT
*
241579 TTAAGAGACAAACCTTGATTCTATCA
450 TTAAGAGACAAACTTTGATTCTATCA
* * *
241605 AAAAC-AGTTGAAAGAAATGCTTTTCTTGCGACCCCAAAGCATCAATGTCATGTATCCTAATTAA
1 AAAACGA-TTGAAAGAAATGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * * ** **
241669 AGAAATGTGTCTCTAGTTCCCAATCGTGAAAAGAATGGATTCTGTTACGAGAATCAACACTTGCC
65 AGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
* * * *
241734 TTCTTTAAGGGAGGAACTTTGATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
130 ATATTTAAGGGATGAACTTTGATTTT-AGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
* * * *
241799 AAATCCTCAACATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGCCTAAACACAAAGTGAAT
194 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAAT
* * * *** *
241864 GAAGATCATT-TTTGAAATCCACGTTTGTTGTAATTGAGGCA-GAACTTAGACCTTACAAAAATT
259 GAAGATCATTACTAG-AATCCATGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATT
* * *
241927 GG-GCGGAAGAAAGCTTTTCTTACGAAACCAATA-CATCAATATTGTGTATCCTTGTGAGAAGAC
323 GGTG-GGAAGAAAGCCTTTCTTACGAAACCAA-AGCATCAATATCGTGTATCCTTATGAGAAGAC
* * * * * * * ** *
241990 AAAGTTTACGATGCCTAATTC-GAAAAAGAATGAGGATTACTATAACTATTCACATTTGTTTTAT
386 TAAGTTTATGGTGCCTAATCCTG-AAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTAT
*
242054 TTAAGAGACAAGCTTTGATTCTATCA
450 TTAAGAGACAAACTTTGATTCTATCA
* * * * *
242080 AAAACGGTTGAAAGAAATGCATTTCTTGCGTCACTAAAGCGTTAATGTCATGTATCCTAATGAAA
1 AAAACGATTGAAAGAAATGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAA
* * *
242145 GGAATGTGTTTCTGGTTCCCAATCATGAAAGGAATGGAGACTGTTATGAGAATCAATGCTTGCCA
66 GGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCA
* * * * * *
242210 TATTTAAGGGATGAGCTTTGCTTTCAGGAAAATAGGGCAAACAGAAGATTTCCATGCAGAAGAAA
131 TATTTAAGGGATGAACTTTGATTTTAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* * * * * *
242275 ATCGTTAATATCATTTATCTTAATGAAGAGAATGTGTTTATAGTGCCTATTCAGAAAGTGAATGA
196 ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGA
* * * **
242340 ATATCATTACTAAAATCCACG--T-T--CAATTGAGGCACGAACTTAGACTTTACAAAAATTATT
261 AGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGT
* * * **
242400 GGGAA-AGAAG-CTTCCCTTATGAAACCAAAACATCAATATCGTGTATCAGTATGAGAAGACTAA
326 GGGAAGA-AAGCCTT-TCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAA
* * *
242463 GTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCCTGTTTATCTTATTTAA
389 GTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAA
242528 GAGACAAACTTTGATTCTATCA
454 GAGACAAACTTTGATTCTATCA
* * * * * * *
242550 AAAACGGTTGAAAGAAATGCTTTTCTTGCGACCCCAAAGCGTCAATGTCATGTAACCTAATGTAG
1 AAAACGATTGAAAGAAATGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAA
* * * * *
242615 GGAA------TAT-GTTCCAAATTATAAAAAGAATGAAGACTGTTACGAGAATCAATGCTTGCC-
66 GGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCA
* * *
242672 T-TTGTAAAGGATGAACATTGATTTTTAGGAAAATAGGGCAAA-AAAAGATTTACATGCAAAA-A
131 TATT-TAAGGGATGAACTTTGA-TTTTAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
* * * * * *
242734 AAATCATCCATATCATTTTTCCTAACGAGGGGAATGCGTTTATAATGCCTAATCACAAAGTGAAT
194 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAAT
* * * * * * * *
242799 GAAGATCATTTCTAGAATCCATTTTTGTCATAATTGAGGCATGAACTTAAACTTTATAGAGATTG
259 GAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTG
* * * *
242864 GTGGCAAGAAAGCCTTTCTTACGAAACCAAATCATCAAAATCGTGTATCCTTATAAGAAGACTAA
324 GTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAA
* *
242929 GTTTATGGTACCTAATCCT-AAAATGAGTGGGGATTAGTATGACTATTCATGTTTGTCTTATTTA
389 GTTTATGGTGCCTAATCCTGAAAA-GAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTA
*
242993 AGAGGCAAACTTTGATTCTATCA
453 AGAGACAAACTTTGATTCTATCA
* * * **
243016 AAAAC-AGTTGGAAGAAATGCTTTTCTTGCGACACCAATGCATCAATGTCATGTATTGTAATGAA
1 AAAACGA-TTGAAAGAAATGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAA
* * * * **
243080 AGAAATGTGATTTTGGTTCCCAATCTTGAAAAAAATGGAGACTGTTACGAGAATCAAAACTTG-C
65 AGGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCC
** * * * ** *
243144 ATTATTTAATTGATGAACATTGATTTTTAGGAAAATAGGGCAAAAAAAAGATTTACATGTGAAGG
130 A-TATTTAAGGGATGAACTTTGA-TTTTAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
* * * *
243209 AAAATCATCCATATCATTTATCCTAAAGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATAAA
193 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAA
* * *
243274 TGAAGATCATTGCTAGAATCAATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATT
258 TGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATT
** * * ** ** * *
243339 GGTGCAAAGAGAGCATTTCTTATAAAACC-AA-TTTCAATATCGTGTGTCCTTATTAGAAGACTA
323 GGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTA
* * * *
243402 AGTTTATGGTGCCTTATCCTGAGAAGAATGGGGATTAGTATGA-TCATTCATTTTTGTCTCATTT
388 AGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACT-ATTCATGTTTGTCTTATTT
* *
243466 AAAAGACAAACTTTGATTCTATAA
452 AAGAGACAAACTTTGATTCTATCA
* * * ** * *
243490 AAAACGATTGAAAGAAATGCTTTTCCTGCGACCCCAAAGTGTCATTGTCATGTATCCTATTGAAA
1 AAAACGATTGAAAGAAATGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAA
* * * * *
243555 GGAATGTATTTTTGGTTCCCAAACAGGAAAAGAATGGAGACTGTTA-GAGAATCAATGCTTGTCT
66 GGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCA
* *
243619 TACTTAAGGGAT-AATCTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAATA
131 TATTTAAGGGATGAA-CTTTGATTTT-AGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
*
243683 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAATGTGAAT
194 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAAT
* * * *
243748 GAAGATCATTACCAGAATCCATGTTTGTCAAAATTGAGGTAC-AGACTTAGACTTTAAAAAAATT
259 GAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGA-ACTTAGACTTTACAAAAATT
* * * * * ** *
243812 GGTGGGGAGAAAGCTTTTCTTACAAAACCAAAAG-ACCAATATTGTGTAAGCTTATTAGAAGACT
323 GGTGGGAAGAAAGCCTTTCTTACGAAACC-AAAGCATCAATATCGTGTATCCTTATGAGAAGACT
* * * * **** * * * **
243876 AAGTTTATGGTGCATCAAT-ATCG---TGCATCCTTATTAG-AAGACTAAGTTTATG-GTACCTT
387 AAGTTTATGGTGCCT-AATCCT-GAAAAGAATGGGGATTAGTATGACT-A-TTCATGTTTGTCTT
* * *
243935 ATCCTGAGAAGA-ATAGGGA-TTAGTATGATC-ATTCA
448 AT-TTAAG-AGACA-A---ACTTTG-AT--TCTA-TCA
** * * ** * * * * * **
243970 TGTTTATCTTACTT-AAGAGGCAAAT--ATTGATT-CTATCA--AAAACGGTGGAAAGAAATGCT
1 ---AAAAC-GA-TTGAA-A-G-AAATGCATTTCTTGCGA-CACCAAAGC-AT-CAATGTCATG--
* * ** * ******
244029 TTTCTTGTGACAACAAAGCGTCAATGTCTTGTATCCTAATGAAAGGAATGTGTCTCCAGTCCCAA
53 TATC--CT-A-ATGAAAG-G--AATG---TGT-T--T-TTG--GTTCCC--------------AA
* *
244094 TCATGAAAAGAATGGA-ATCTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGAAGAACTTTGA
88 TCATGAAAAGAATGGAGA-CTGTTACGAGAATCAATGCTTGCCATATTTAAGGGATGAACTTTGA
* * * *
244158 TTTTATGAAAAATAGGCCACAGAAAAGATTTCCATGCAAAAGAAAATCTTCAATATCATTTATCC
152 TTTTA-GGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
* * * * * *
244223 TAATGAGGACAATGTTTTTATAGTGCCTAATCATAAAGTGAATAAAGATCATTTCTAAAATCCAT
216 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAGAATCCAT
* * * * *
244288 GTTTGTCACAATTAAGGCACGAACTTAGACCTTACGAAAATTGGGGGGAAGAAAGCCTTTCTTAG
281 GTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAC
* * *
244353 GAAACCAAAGCATCAATATTGTGTATCCTTATGAGAAGAC-AAATTTCATGGTGCCTAATCCTAA
346 GAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAGTTT-ATGGTGCCTAATCCTGA
* * * * * *
244417 AAAGAATGAGGATCAATATGTCTATTTCA--TTTGTCGTATTTAAGAGACAAACATTGATTCTAT
410 AAAGAATGGGGATTAGTATGACTA-TTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAT
244480 CA
474 CA
* * * * *
244482 AATACGGTTGAAAGAAATGCATTTCTTGTGACACCAAAGCATCAATGTCAAGTATCCTAATGAAT
1 AAAACGATTGAAAGAAATGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAA
* * * * *
244547 GAAATATGTTTCTGGTTCCCAATCATGAAAGGAATGGAGGCTGTTACGAGAATCAATGCTTGCCA
66 GGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCA
* * * * *
244612 CATTTAAGGGATGACCTTTGCTTTTCGGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAA
131 TATTTAAGGGATGAACTTTGATTTT-AGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * * *
244677 AATCGTTAATATCATTTATCCTAATGAGGAGAATGTGTTTACAGTACCTAATCACAAAGTGAATG
195 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATG
** ** * * **
244742 AAGATCATTACTAGAATCCACATTTGTCACAATTGAGGCTTGAACTTAGACTTTACGAAAACTAT
260 AAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGG
* * * *
244807 TGGGAAGAAAGCCTTTCTTATGAAACCAAAGCATCAATATTGTGTATCTTTATGAAAAGACTAAG
325 TGGGAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAG
* * * *
244872 TTTATGGTGCCCAATCCTGAAAAGAATGGGGATTAGTATGACTATTCTTATTTGTCTTTTTTAAG
390 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAG
* *
244937 AGGCAAACTTTGATTCTATAA
455 AGACAAACTTTGATTCTATCA
* *
244958 AAAACGATTGAAAAAAATGCATTTCTTGCGACA-CAAAGCATCAATGACATGTATCCTAATGAAA
1 AAAACGATTGAAAGAAATGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAA
* * * * * ** *
245022 GGAA--TGTTTCTGGTTCCCATTCAAGAAAGGAATGGAAACTCCTACGAGAATTAATGCTTGCCA
66 GGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCA
* * *
245085 TATTTAAGGGATGAGCTTTGCTTTTAGGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAA
131 TATTTAAGGGATGAACTTTGATTTTA-GGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
*
245150 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTGTAGTGCCTAATCACAAAGTGAATG
195 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATG
* ** * **
245215 AAGATCATTACTAGAATCCACGTTTGTCACAATTGAGGCATAAACTTAGACTTTGC-AAAATTAT
260 AAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGG
* *
245279 TGGGAAGAAAGCCTTTCTTATGAAGCCAAAGCATCAATAT-GTGTATCCTTATGAGAAGACTAAG
325 TGGGAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAG
* * * * * *
245343 TTTATGGTTCCTAATCTTGAAAAGAATGGGGATTAGTATAACTATTCCTCTTTGTCTTTTTTAAG
390 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAG
* *
245408 AGGCAAACTTTGATTCTATAA
455 AGACAAACTTTGATTCTATCA
* * *
245429 AAAATGGTTGAAAAAAATGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAA
1 AAAACGATTGAAAGAAATGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAA
* * *
245494 GGAATGTGTTTTTGGTTCCCAATCATGAAAGGAATGGAGACTGTTACGCGAATCAATGCTTACCA
66 GGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCA
* *
245559 TATTTAAGGGATGAGCTTTGCTTTTAGGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
131 TATTTAAGGGATGAACTTTGATTTTAGG-AAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * *
245624 AATCATCAATATCATTTATCCTAATAAAGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAAGG
195 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATG
* * * * **
245689 AAGATAATTACTAGAATCCACGTTTGTCACAATTGAGGCAGGAACTTAGACTTTACAAAAGTTAT
260 AAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGG
**
245754 TGGGAAGAAAATCTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAG
325 TGGGAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAG
* * *
245819 TTTATGGTGCCTAATCCTGAAAAGAATGGAGA-TAGTATGACTATTCATGTTTCTCTTATTTGAG
390 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAG
*
245883 AGGCAAACTTTGATTCTATCA
455 AGACAAACTTTGATTCTATCA
245904 AAAACGATTGAAA
1 AAAACGATTGAAA
245917 AATGTTAGGA
Statistics
Matches: 4014, Mismatches: 621, Indels: 307
0.81 0.13 0.06
Matches are distributed among these distances:
461 74 0.02
462 30 0.01
463 64 0.02
464 3 0.00
465 4 0.00
466 212 0.05
467 4 0.00
469 14 0.00
470 202 0.05
471 135 0.03
472 94 0.02
473 480 0.12
474 582 0.14
475 1065 0.27
476 474 0.12
477 116 0.03
478 42 0.01
479 1 0.00
480 4 0.00
483 5 0.00
484 7 0.00
485 12 0.00
486 1 0.00
487 7 0.00
489 1 0.00
490 1 0.00
491 6 0.00
492 2 0.00
494 5 0.00
495 3 0.00
497 2 0.00
498 4 0.00
500 1 0.00
501 6 0.00
502 1 0.00
503 1 0.00
505 7 0.00
506 1 0.00
507 15 0.00
508 4 0.00
509 5 0.00
512 5 0.00
513 1 0.00
514 3 0.00
515 2 0.00
516 1 0.00
517 39 0.01
518 244 0.06
519 8 0.00
520 10 0.00
521 4 0.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (475 bp):
AAAACGATTGAAAGAAATGCATTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGAAA
GGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCA
TATTTAAGGGATGAACTTTGATTTTAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGA
AGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGT
GGGAAGAAAGCCTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAGT
TTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGA
GACAAACTTTGATTCTATCA
Found at i:246319 original size:13 final size:13
Alignment explanation
Indices: 246301--246326 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
246291 TACACCAAGT
246301 ATGTATCGATACA
1 ATGTATCGATACA
246314 ATGTATCGATACA
1 ATGTATCGATACA
246327 CAAAAAATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:246324 original size:32 final size:33
Alignment explanation
Indices: 246283--246346 Score: 94
Period size: 32 Copynumber: 2.0 Consensus size: 33
246273 TAGCCAAACT
* **
246283 TGTATCGATACACCAAGTA-TGTATCGATACAA
1 TGTATCGATACACAAAAAATTGTATCGATACAA
246315 TGTATCGATACACAAAAAATTGTATCGATACA
1 TGTATCGATACACAAAAAATTGTATCGATACA
246347 CAAAAAATTG
Statistics
Matches: 28, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
32 16 0.57
33 12 0.43
ACGTcount: A:0.41, C:0.17, G:0.14, T:0.28
Consensus pattern (33 bp):
TGTATCGATACACAAAAAATTGTATCGATACAA
Found at i:246340 original size:20 final size:20
Alignment explanation
Indices: 246315--246366 Score: 104
Period size: 20 Copynumber: 2.6 Consensus size: 20
246305 ATCGATACAA
246315 TGTATCGATACACAAAAAAT
1 TGTATCGATACACAAAAAAT
246335 TGTATCGATACACAAAAAAT
1 TGTATCGATACACAAAAAAT
246355 TGTATCGATACA
1 TGTATCGATACA
246367 TTGGCTTGTA
Statistics
Matches: 32, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
20 32 1.00
ACGTcount: A:0.46, C:0.15, G:0.12, T:0.27
Consensus pattern (20 bp):
TGTATCGATACACAAAAAAT
Found at i:250432 original size:15 final size:15
Alignment explanation
Indices: 250412--250442 Score: 53
Period size: 15 Copynumber: 2.1 Consensus size: 15
250402 TAAAAATGTC
*
250412 CAAAATGAGGAAGCT
1 CAAAATGAAGAAGCT
250427 CAAAATGAAGAAGCT
1 CAAAATGAAGAAGCT
250442 C
1 C
250443 CAAACGAAAT
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.48, C:0.16, G:0.23, T:0.13
Consensus pattern (15 bp):
CAAAATGAAGAAGCT
Found at i:252484 original size:13 final size:13
Alignment explanation
Indices: 252466--252491 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
252456 ACATTTTTCT
252466 TTGTATCGATACA
1 TTGTATCGATACA
252479 TTGTATCGATACA
1 TTGTATCGATACA
252492 GGGGGATTAT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:252655 original size:20 final size:19
Alignment explanation
Indices: 252614--252656 Score: 52
Period size: 20 Copynumber: 2.2 Consensus size: 19
252604 ATTTTTTACA
252614 AAATACTTGTTTTTCACTTC
1 AAATACTTGTTTTTCAC-TC
252634 AAATCACTTAGTTTTTCA-TC
1 AAAT-ACTT-GTTTTTCACTC
252654 AAA
1 AAA
252657 ACCAGCATCA
Statistics
Matches: 21, Mismatches: 0, Indels: 4
0.84 0.00 0.16
Matches are distributed among these distances:
20 9 0.43
21 4 0.19
22 8 0.38
ACGTcount: A:0.33, C:0.19, G:0.05, T:0.44
Consensus pattern (19 bp):
AAATACTTGTTTTTCACTC
Found at i:256695 original size:476 final size:475
Alignment explanation
Indices: 255790--259886 Score: 4775
Period size: 476 Copynumber: 8.7 Consensus size: 475
255780 CTTTCAAAAA
* * * **
255790 AAATGCATTTCTTGCGACACCAAAGCGTCAATGTCATGTTTCCTAATGAAAGGAATGCATTTCTG
1 AAATGCATTTCTTGCGACACCAAAGGGACAATGTCATGTATCCTAATGAAAGGAATGTGTTTCTG
* * * *
255855 GTTGCCAATCATG-AAAGAAATTGATACTATTATGAGAATCAAT-CTTTGCCATATTTAAGGGAT
66 GTTCCCAATCATGAAAAG-AATGGAGACTGTTATGAGAATCAATGC-TTG-CATATTTAAGGGAT
* ** * * * *
255918 GAACTTTGCTTTTTTGGAAAATAGGGCAAAGAAGAGATTTGCAAGCAGAAGAAAATCATCAATAT
128 GAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATAT
* *
255983 CATTTATCCTAATGAGGAGAATTTGTTTATAGTGCCTAATTACAAAGTGAATGAAGATCATTACT
193 CATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACT
* * * ** *
256048 AGAATCCACGTTTGTCACAATTGAGGCACGAACCTCGACTTTATAAAAATTATTGGGAAAAAAGC
258 AGAATCCACGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGC
* * * * *
256113 CTTTCTTATGAAACCAAAGCGTCAATATCGTGTATCCTTTTGAGAAGACTATGTTTATGGTGCAT
323 CTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAGTTTATGGTGCCT
* * * * * *
256178 AATCCTAAAAAGAATGGGAATTAGTATGACTATTCATGTTTGTTTTATTTGAGTGAGAAACTTTG
388 AATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTG
256243 ATTCTATCAAAAACGGTTGAAAG
453 ATTCTATCAAAAACGGTTGAAAG
* * * * * *
256266 AAATGCTTTTCTTGTGACACCAAAGGGAGAATGTCTTGTAACCTAATGAAAGAAATGTGTTTCTG
1 AAATGCATTTCTTGCGACACCAAAGGGACAATGTCATGTATCCTAATGAAAGGAATGTGTTTCTG
* * * * * * * * *
256331 GTTCCTAATCTTGAAAATAATAGAGACTGTTGTGAGAAGCAATGCTTGCATTCTTTAAGGTATAA
66 GTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGCTTGCA-TATTTAAGGGATGA
** * * * *
256396 AAATTGATTTTAAGGAAAATAGGGTAAAAAAAAGATTTCCAAGCAAAAGAAAATCATCGATATCA
130 ACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCA
** * *
256461 TTTATCCTAATGAGGAGAATAAGTTTATAGAGCCTAATCACAAAGAGAATGAAGATCATTACTAG
195 TTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAG
* * * **
256526 AATCCTA-GTTTATCATAATTGAGGCACGAACTTATG-CTTTACAATAATTGGTGGGAAGACTGC
260 AATCC-ACGTTTGTCACAATTGAGGCACGAACTTA-GACTTTACAAAAATTGGTGGGAAGAAAGC
* * * * * *
256589 CTTTCTTACGAAACCAATA-CTTCAGTATCATGTATCCTTATTAGAAGACTAAGTTTATGGAGTC
323 CTTTCTTACGAAACCAA-AGCATCAATATCGTGTATCCTTATGAGAAGACTAAGTTTATGGTGCC
* * * * * *
256653 TAATCCTGAAAAGAATGGGGATTAATATAATTATTGATGTTTGTCTT-TCTTAATAGATAAACTT
387 TAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTAT-TTAAGAGACAAACTT
*
256717 TGATTCTATCAAGAACGGTTGAAA-
451 TGATTCTATCAAAAACGGTTGAAAG
* * * * * * * *
256741 AAATTCTTTTCTTGCGACACTATAGTGACAATGACATGTATCCTAACGAAAGGAATGTGTTTATG
1 AAATGCATTTCTTGCGACACCAAAGGGACAATGTCATGTATCCTAATGAAAGGAATGTGTTTCTG
* * * * * * *
256806 GTTCCCAATCTTGAGAAGAGTGGAGACTATTACGAGAATCAATGCTTACCTTATTTAAGGGATG-
66 GTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGCTT-GCATATTTAAGGGATGA
** ***
256870 -C-TT-ACCTT-------AT-------TTTAAAGATTTCCATGCAAAAGAAAATCATCAATATCA
130 ACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCA
* *
256918 TTTATCCTAAAGAGGAGAATGTGTTTATAGTGCCTAGTCACAAAGTGAATGAAGATCATTACTAG
195 TTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAG
* ** *
256983 AATCCATGTTTGTCACAATTGAGGCATAAACTTAGAATTTACAAAAATTGGTGGGAAGAAAG-CT
260 AATCCACGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCT
** * * *
257047 TCTCTTTGGAAACCAAAGCATCAATATCGTGTATCCTTATCAGAAGACTAAGTTTGTGGGGCCTA
325 T-TCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAGTTTATGGTGCCTA
* * * * *
257112 ATCTTAAAAAGAATGGGGATTAGTATGATTATTCATGTTTGTCCTATTTAGGAGACAAACTTTGA
389 ATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGA
* **
257177 TTCTAACAAAAACTATTGAAAG
454 TTCTATCAAAAACGGTTGAAAG
* * * * * * *
257199 AAATGCTTTTCTTGTGAC-CCTAAAGCG-CAAATGTTATGTATACTAATGAAAAGAATGTGTTTT
1 AAATGCATTTCTTGCGACACC-AAAGGGAC-AATGTCATGTATCCTAATGAAAGGAATGTGTTTC
* * * *
257262 TGGTTCCCAATTATGAAAAGAATGGCGACTGTTATAAGAATCAATGCTTGCTTTATTTAAGGGAT
64 TGGTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGCTTGC-ATATTTAAGGGAT
* * * *
257327 GAACTTTGATTTTTAGG-AAATAAGGCAAAGAAAAGTTTTCCATGCAAAAGAAAATGCTTCAATA
128 GAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAAT-CATCAATA
* * * * *
257391 TCATTTATCATAGTAAGGAGAATGTGTTTATAATGCCTAATCACAAAGTGAATGAAGTTCATTAC
192 TCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTAC
* * *
257456 TAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGACTTTACGAAAATTGGTAGGAAGAAAG
257 TAGAATCCACGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAG
* * *
257521 CTTTTCTTACAAAACCAAAGCATCAATATTGTGTATCCTTATGAGAAGA-TGAAGTTTATGGTGC
322 CCTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACT-AAGTTTATGGTGC
* * * *
257585 CTAATCCTGAAAAGAAAGAGGATTAGTATGACTATTCATGTTTGTCTTATTCAAGAGACAAACAT
386 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTT
*
257650 TGATTCTATCAAAAATGGTTGAAAG
451 TGATTCTATCAAAAACGGTTGAAAG
* *
257675 AAATGCATTTCTTGTGACACCAAA-GCATCAATGTCATGTATCCTAATGAAAGGAATGTGTTTCT
1 AAATGCATTTCTTGCGACACCAAAGGGA-CAATGTCATGTATCCTAATGAAAGGAATGTGTTTCT
* * *
257739 GGTTCCCAATCATGAAAAGAATAGAGATTGTTACGAGAATCAATGCTTGCCATATTTAAGGGATG
65 GGTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGCTTG-CATATTTAAGGGATG
* * * * * * *
257804 AGCTTTGCTTTTTAGGAAAATAGGGCAAAGAAAAGATTTTCACGCAAAAGAAAATCGTTAATATC
129 AACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATC
* * ** *
257869 ATTTATCGTAAAGAGGAGAATGCATTTATAGTGCCTAATCAAAAAGTGAATGAAGATCATTACTA
194 ATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTA
* **
257934 GAATCCACGTTTGTCACAATTGAGGCACGAACTTAGACTTTGCAAAAATTATTGGGAAGAAAGCC
259 GAATCCACGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAG-C
* * * * *
257999 CTTT-TTATGAAACCAAAGCATCAACATCGTGTATCCATATAAGAAGACTAAGTTTATGGCGCCT
323 CTTTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAGTTTATGGTGCCT
* * *
258063 AATCCTAAAAAGAATGGGAATTAGTATGATTATTCATGTTTGTCTTATTTAAGAGACAAACTTTG
388 AATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTG
* * *
258128 ATTCTATAAAAAATGGTTGAAAA
453 ATTCTATCAAAAACGGTTGAAAG
* *
258151 AAATGCATTTCTTGCGACACCAAA-GCATAAATGTCATGTATCCTAATGAAAGGAATGTGTTTCT
1 AAATGCATTTCTTGCGACACCAAAGGGA-CAATGTCATGTATCCTAATGAAAGGAATGTGTTTCT
* * * * *
258215 GGTTCCCAATCATGAAAGGAGTTGAGAC-GATTATAAGAATCAATGCTTGCCAAATTTAAGGGAT
65 GGTTCCCAATCATGAAAAGAATGGAGACTG-TTATGAGAATCAATGCTTG-CATATTTAAGGGAT
* * * * *
258279 TAGCTTTGCTTTT-CGAGAAAATAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATA
128 GAACTTTGATTTTAAG-GAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATA
* * **
258343 TCTTTTATCCTAATGAAGAGAATGCATTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTAC
192 TCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTAC
* * * **
258408 TAAAATCTACGTTTGTCACAATTGGGGCACGAACTTAGACTTTACAAAAATTATTGGGAAGAAAG
257 TAGAATCCACGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAG
* * *
258473 CCTTTCTTATG-AACGCAAAGCATCAATATCATGTATCCTTATGAGAAGACTAAGTTTACGGTGC
322 CCTTTCTTACGAAAC-CAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAGTTTATGGTGC
* * *
258537 CTAATCTTGAAAAGAATGGGGACTAGTATGACTATTCATGTTTGCCTTATTTAAGAGACAAACTT
386 CTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTT
* *
258602 TGATTCTATCAAAAATGGTTGAAAA
451 TGATTCTATCAAAAACGGTTGAAAG
* * * * * *
258627 AAATGCATTTCTTACGACACC-AAGCGTCAATGTCATGTAT--T-ATGAAATGAATGTATTTTTG
1 AAATGCATTTCTTGCGACACCAAAGGGACAATGTCATGTATCCTAATGAAAGGAATGTGTTTCTG
* * * ** *
258688 GTTCCCAATCATGAAAAGAATAGAGACTGCTAAGAGAATCAATATTTGCCATATTTAAGCGATGA
66 GTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGCTTG-CATATTTAAGGGATGA
* * ** * * * * *
258753 ACATTGCTTTTCGGGAAAATAGGACAAAGAAGAGATTTCCCTGCAAGAGAAAATCGTCAATATC-
130 ACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCA
* * * * *
258817 -TTATCCTAATGAGGAGAATGTGTTTTTAGTGTCGAATCACAAATTGAATGAAGATCATTTCTAG
195 TTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAG
* * ** * *
258881 AATTCACGTTTGTCACAATTGAGCCACGAACTTAGACTTTATGAAAATTGGTGGGAATAAAGCTT
260 AATCCACGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCT
* * * * *
258946 TTTTTACGAATCCAAAGCATCAATATTGTGTATCTTTATGAGAAGACGAAGTTTATGGTGCCTAA
325 TTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAGTTTATGGTGCCTAA
* ** * *
259011 TCCTGAAAAAAATATGGATTGGTATGACTATTCATGTTTGTCTTATTTAAGAGAGAAACTTTGAT
390 TCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGAT
259076 TCTATCGAAAAA-GGTTGAAAG
455 TCTATC-AAAAACGGTTGAAAG
* * *
259097 AAATGCATTTCTTGCGACACCAAAGAGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTCTA
1 AAATGCATTTCTTGCGACACCAAAGGGACAATGTCATGTATCCTAATGAAAGGAATGTGTTTCTG
* * * * *
259162 GTTCCTAATCATGAAAGGAATGGAGACTATTATGAG---C----C-T---TATTTAAGGAATTAA
66 GTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGCTTGCATATTTAAGGGATGAA
* * * * * * **
259216 CTTTGTTTTTAAGAAAAATAAGGCAAAGAAAAGATTTCTATGCAAAAGAATATGCTTCAATGCCA
131 CTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAAT-CATCAATATCA
* *
259281 TTTATCTTAGTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAG
195 TTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAG
* * * * * *
259346 AATCCATGTTTGTCATAATTGAGGCATGAAC-TAGACTTTATAGAAATTGGTGGAAAGAAAGCCT
260 AATCCACGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCT
* *
259410 TTCTTACGAAACTAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAGTTTATGGTCCCTAA
325 TTCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAGTTTATGGTGCCTAA
* * * *
259475 T-CTGAAAAAGAATGGGGATTTGTATGATTATTCATGTTTGTCTAATTTAAGAGCCAAACTTTGA
390 TCCTG-AAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGA
259539 TTCTATCAAAAACGGTTGAAAG
454 TTCTATCAAAAACGGTTGAAAG
* * * ** * * *
259561 AAATAC-TTTACTTGTGACCCCAAACTGTCAATGTCATGTATCCTAATGAAAAGAATGTGTTTTT
1 AAATGCATTT-CTTGCGACACCAAAGGGACAATGTCATGTATCCTAATGAAAGGAATGTGTTTCT
* * * *
259625 GGTTCCCAATCATGAAAAGAATGGAGATTGTTATGAGAATCAATGTTTGCCCTATTTATGGGATG
65 GGTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGCTTG-CATATTTAAGGGATG
* * * * *
259690 AACTTTGA-TTTAAGGGAAATAAGGTAAAAAAAAGATTTCCATGCAAAATAAAATCATCAATATC
129 AACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATC
* * * *
259754 ATTTATCCTAATGAGGAAAATGTGTTTATAGTGCCAAATCACAAAATGAATGAAGATCATTACTT
194 ATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTA
* * * *
259819 GAATCCAAGTTTGTCACAATTGAGGCATGAACTTAGA-TTTAAAAAAATTGGTGGGAAGAAAGTC
259 GAATCCACGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCC
259883 TTTC
324 TTTC
259887 CCTATCATGA
Statistics
Matches: 3087, Mismatches: 458, Indels: 154
0.83 0.12 0.04
Matches are distributed among these distances:
456 6 0.00
457 268 0.09
458 104 0.03
460 1 0.00
461 2 0.00
462 56 0.02
463 18 0.01
464 241 0.08
465 83 0.03
466 1 0.00
467 1 0.00
468 2 0.00
470 255 0.08
471 29 0.01
472 125 0.04
473 4 0.00
474 169 0.05
475 195 0.06
476 1475 0.48
477 52 0.02
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (475 bp):
AAATGCATTTCTTGCGACACCAAAGGGACAATGTCATGTATCCTAATGAAAGGAATGTGTTTCTG
GTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGCTTGCATATTTAAGGGATGAA
CTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCAT
TTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAGA
ATCCACGTTTGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTT
TCTTACGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAGTTTATGGTGCCTAAT
CCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATT
CTATCAAAAACGGTTGAAAG
Found at i:260090 original size:257 final size:258
Alignment explanation
Indices: 259627--260136 Score: 729
Period size: 257 Copynumber: 2.0 Consensus size: 258
259617 GTGTTTTTGG
* * ** * *
259627 TTCCCAATCATGAAAAGAATGGAGATTGTTATGAGAATCAATGTTTGCCCTATTTATGGGATGAA
1 TTCCCAATCATGAAAAGAATGGAGACTATTACCAGAATCAATGCTTGCCCTATTTAAGGGATGAA
* * * * *
259692 CTTTGATTTAAGGGAAATAAGGTAAAAAAAAGATTTCCATGCAAAATAAAATCATCAATATCATT
66 CTTTGATTTAAGGAAAATAAGGTAAAAAAAAGATTTCCATGCAAAATAAAATCAACAACACCACT
*
259757 TATCCTAATGAGGAAAATGTGTTTATAGTGCCAAATCACAAAATGAATGAAGATCATTACTTGAA
131 TATCCTAATGAGGAAAATGTGTTTATAGTGCCAAATCACAAAATGAATGAAGATCATTACTAGAA
**
259822 TCCAAGTTTGTCACAATTGAGGCATGAACTTAGA-TTTAAAAAAATTGGTGGGAAGAAAGTCT
196 TCCAAGTTTGTCACAATTGAGGCACAAACTTAGACTTTAAAAAAATTGGTGGGAAGAAAGTCT
* *
259884 TTCCCTATCATGAAAAGAATGGAGACTATTACCAGAAT-AATGCTTGCCTTATTTAAGGGATGAA
1 TTCCCAATCATGAAAAGAATGGAGACTATTACCAGAATCAATGCTTGCCCTATTTAAGGGATGAA
*
259948 CTTTGATTTTAAGGAAAATAAGGTAAAGAAAAGATTTCCATGCAAAATAAAATCAACAACACCAC
66 CTTTGA-TTTAAGGAAAATAAGGTAAAAAAAAGATTTCCATGCAAAATAAAATCAACAACACCAC
* * ** * * *
260013 TTATCCTAATGAGGAGAATGTGTTTATATTGCCTTGA-CCCAAAGTGAATGAAGATCTTTACTAG
130 TTATCCTAATGAGGAAAATGTGTTTATAGTGCC-AAATCACAAAATGAATGAAGATCATTACTAG
* * * *
260077 AATCTATGTTTGTCATAATTGAGGCACAAACTTAGACTTTACAAAAATTGGTGGGAAGAA
194 AATCCAAGTTTGTCACAATTGAGGCACAAACTTAGACTTTAAAAAAATTGGTGGGAAGAA
260137 TGCCTTTCTT
Statistics
Matches: 222, Mismatches: 28, Indels: 5
0.87 0.11 0.02
Matches are distributed among these distances:
256 29 0.13
257 170 0.77
258 23 0.10
ACGTcount: A:0.39, C:0.13, G:0.18, T:0.30
Consensus pattern (258 bp):
TTCCCAATCATGAAAAGAATGGAGACTATTACCAGAATCAATGCTTGCCCTATTTAAGGGATGAA
CTTTGATTTAAGGAAAATAAGGTAAAAAAAAGATTTCCATGCAAAATAAAATCAACAACACCACT
TATCCTAATGAGGAAAATGTGTTTATAGTGCCAAATCACAAAATGAATGAAGATCATTACTAGAA
TCCAAGTTTGTCACAATTGAGGCACAAACTTAGACTTTAAAAAAATTGGTGGGAAGAAAGTCT
Found at i:260791 original size:731 final size:721
Alignment explanation
Indices: 259282--260614 Score: 1888
Period size: 731 Copynumber: 1.8 Consensus size: 721
259272 TCAATGCCAT
* * * * * *
259282 TTATCTTAGTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAGA
1 TTATCCTAATGAGGAGAAAGTGTTTATATTGCCTGA-CCCAAAGTGAATGAAGATCATTACTAGA
** * *
259347 ATCCATGTTTGTCATAATTGAGGCATGAACTAGACTTTATAGAAATTGGTGGAAAGAAAGCCTTT
65 ATCCATGTTTGTCATAATTGAGGCACAAACTAGACTTTACAAAAATTGGTGGAAAGAAAGCCTTT
* * * *
259412 CTTACGAAACTAAAGCATCAATATCGTGTATCCTTATGAGAAGACTAAGTTTATGGTCCCTAATC
130 CTTACAAAACTAAAGCATCAATATCCTGTATCCTTATGAAAAGACTAAGTGTATGGTCCCTAATC
* *
259477 TGAAAAAGAATGGGGATTTGTATGATTATTCATGTTTGTCTAATTTAAGAGCCAAACTTTGATTC
195 TGAAAAAGAATGGGGATTAGTATGATTATTCATGTTTGTCTAATTTAAGAGACAAACTTTGATTC
* *
259542 TATCAAAAACGGTTGAAAGAAATACTTTACTTGTGACCCCAAACTGTCAATGTCATGTATCCTAA
260 TATCAAAAACGGTTGAAAGAAATACTTTACTTGCGACCCCAAACCGTCAATGTCATGTATCCTAA
* *
259607 TGAAAAGAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGATTGTTATGAGAATCAATGTT
325 TGAAAAGAATGTGTTTTTAGTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGTT
* *
259672 TGCCCTATTTATGGGATGAACTTTGATTTAAGGGAAATAAGGTAAAAAAAAGATTTCCATGCAAA
390 TGCCCTATTTATGGGATGAACTTTGATTTAAGGGAAATAAGGCAAAAAAAAGATTTCCACGCAAA
*
259737 ATAAAATCATCAATATCATTTATCCTAATGAGGAAAATGTGTTTATAGTGCCAAATCACAAAATG
455 ATAAAATCATCAATATCATTTACCCTAATGAGGAAAATGTGTTTATAGTGCCAAATCACAAAATG
* *
259802 AATGAAGATCATTACTTGAATCCAAGTTTGTCACAATTGAGGCATGAACTTAGATTTAAAAAAAT
520 AATGAAGAGCATTACTAGAATCCAAGTTTGTCACAATTGAGGC---AACTTAGATTTAAAAAAAT
*
259867 TGGTGGGAAGAAAGTCTTTCCCTATCATGAAAAGAATGGAGACTATTACCAGAATAATGCTTGCC
582 TGGTGGGAAGAAAGTCTTT-CCTATCATGAAAACAAT-G-GAC-ATTA-CAGAATAATGCTTGCC
* ** * * *
259932 TTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAAGGTAAAGAAAAGATTTCCATGCAAAATA
642 TTATTTAAAGGATGAACTTTGATGGT-AGCAAAATAAGGAAAAGAAAAGATTACCATGCAAAATA
*
259997 AAATCAACAACACCAC
706 AAATCAACAACACAAC
* *
260013 TTATCCTAATGAGGAGAATGTGTTTATATTGCCTTGACCCAAAGTGAATGAAGATCTTTACTAGA
1 TTATCCTAATGAGGAGAAAGTGTTTATATTGCC-TGACCCAAAGTGAATGAAGATCATTACTAGA
* * *
260078 ATCTATGTTTGTCATAATTGAGGCACAAACTTAGACTTTACAAAAATTGGTGGGAAGAATGCCTT
65 ATCCATGTTTGTCATAATTGAGGCACAAAC-TAGACTTTACAAAAATTGGTGGAAAGAAAGCCTT
* * *
260143 TCTTGCAAAA-TCAATA-CTTCAATATCCTGTATCCTTA-GTAAAAGACTAAGTGTATGGTGCCT
129 TCTTACAAAACT-AA-AGCATCAATATCCTGTATCCTTATG-AAAAGACTAAGTGTATGGTCCCT
*
260205 AATCCT-AAAAAGAATGGGGATTAGTATGATTATTCATGTTTG-CTTATTTAAGAGACAAACTTT
191 AAT-CTGAAAAAGAATGGGGATTAGTATGATTATTCATGTTTGTCTAATTTAAGAGACAAACTTT
* ** * **
260268 GATTCTATCAAAAATGGTTGAAAGAAATGTTTTTCTTGCGACCTTAAACCGTCAATGTCATGTAT
255 GATTCTATCAAAAACGGTTGAAAGAAATACTTTACTTGCGACCCCAAACCGTCAATGTCATGTAT
* * *
260333 CCTAATGAAAAGAATGTGTTTTTAGTTCTCAATCTTGAAAAGAATTGAGACTGTTATGAGAATCA
320 CCTAATGAAAAGAATGTGTTTTTAGTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCA
* * * * * *
260398 ATGTTTGCCTTATTTATGGGATGAACTTTGCTTTAAGGGAAATAGGGCAAATAGAAGATTTCTAC
385 ATGTTTGCCCTATTTATGGGATGAACTTTGATTTAAGGGAAATAAGGCAAAAAAAAGATTTCCAC
* * *
260463 GCAAAATAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCGCA
450 GCAAAATAAAATCATCAATATCATTTACCCTAATGAGGAAAATGTGTTTATAGTGCCAAATCACA
** *
260528 AAGA-GAATGAAGAGCATTACTAGAATCCATTTTTGTCACAATTGAGGC-ACTTAGACTTTACAA
515 AA-ATGAATGAAGAGCATTACTAGAATCCAAGTTTGTCACAATTGAGGCAACTTAGA-TTTAAAA
260591 AAATTGGTGGGAAGAAAGTCTTTC
578 AAATTGGTGGGAAGAAAGTCTTTC
260615 TTATGAAACC
Statistics
Matches: 541, Mismatches: 53, Indels: 20
0.88 0.09 0.03
Matches are distributed among these distances:
727 8 0.01
728 29 0.05
731 381 0.70
732 120 0.22
733 3 0.01
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.32
Consensus pattern (721 bp):
TTATCCTAATGAGGAGAAAGTGTTTATATTGCCTGACCCAAAGTGAATGAAGATCATTACTAGAA
TCCATGTTTGTCATAATTGAGGCACAAACTAGACTTTACAAAAATTGGTGGAAAGAAAGCCTTTC
TTACAAAACTAAAGCATCAATATCCTGTATCCTTATGAAAAGACTAAGTGTATGGTCCCTAATCT
GAAAAAGAATGGGGATTAGTATGATTATTCATGTTTGTCTAATTTAAGAGACAAACTTTGATTCT
ATCAAAAACGGTTGAAAGAAATACTTTACTTGCGACCCCAAACCGTCAATGTCATGTATCCTAAT
GAAAAGAATGTGTTTTTAGTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGTTT
GCCCTATTTATGGGATGAACTTTGATTTAAGGGAAATAAGGCAAAAAAAAGATTTCCACGCAAAA
TAAAATCATCAATATCATTTACCCTAATGAGGAAAATGTGTTTATAGTGCCAAATCACAAAATGA
ATGAAGAGCATTACTAGAATCCAAGTTTGTCACAATTGAGGCAACTTAGATTTAAAAAAATTGGT
GGGAAGAAAGTCTTTCCTATCATGAAAACAATGGACATTACAGAATAATGCTTGCCTTATTTAAA
GGATGAACTTTGATGGTAGCAAAATAAGGAAAAGAAAAGATTACCATGCAAAATAAAATCAACAA
CACAAC
Found at i:261220 original size:476 final size:474
Alignment explanation
Indices: 259890--262611 Score: 3441
Period size: 476 Copynumber: 5.7 Consensus size: 474
259880 GTCTTTCCCT
*
259890 ATCATGAAAAGAATGGAGACTATTACCAGAAT-AATGCTTGCCTTATTTAAGGGATGAACTTTGA
1 ATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGA
* * * * * *
259954 TTTTAAGGAAAATAAGGTAAAGAAAAGATTTCCATGCAAAATAAAATCAACAACACCACTTATCC
66 TTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAATAAAATCATCAATATCATTTATCC
* * * * *
260019 TAATGAGGAGAATGTGTTTATATTGCCTTGA-CCCAAAGTGAATGAAGATCTTTACTAGAATCTA
131 TAATGAGGAGAATGTGTTTATAGTGCC-TAATCACAAA-TGAATGAAGATCATTACTAGAATCCA
* * * * *
260083 TGTTTGTCATAATTGAGGCACAAACTTAGACTTTACAAAAATTGGTGGGAAGAATGCCTTTCTTG
194 TGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTA
* * * * * * *
260148 CAAAATCAATA-CTTCAATATCCTGTATCCTTAGTAAAAGACTAAGTGTATGGTGCCTAATCCTA
259 CGAAACCAA-AGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTG
*
260212 AAAAGAATGGGGATTAGTATGATTATTCATGTTTG-CTTATTTAAGAGACAAACTTTGATTCTAT
323 AAAAGAATGGGGATTAGTATGATTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTAT
* * * *
260276 CAAAAATGGTTGAAAGAAATGTTTTTCTTGCGACCTTAAACCGTCAATGTCATGTATCCTAATGA
388 CAAAAATGGTTGAAAGAAATGCTTTTCTTGCGACC-CAAAGCGACAATGTCATGTATCCTAATGA
* *
260341 AAAGAATGTGTTTTTAGTTCTCA
452 AAGGAATGTGTTTTTGGTTCTCA
* * * * * *
260364 ATCTTGAAAAGAATTGAGACTGTTATGAGAATCAATGTTTGCCTTATTTATGGGATGAACTTTG-
1 ATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGA
* * * * * * *
260428 CTTTAAGGGAAATAGGGCAAATAGAAGATTTCTACGCAAAATAAAATCATCAATATCATTTACCC
66 TTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAATAAAATCATCAATATCATTTATCC
* * *
260493 TAATGAGGAGAATGTGTTTATAGTGCCTAATCGCAAAGAGAATGAAGAGCATTACTAGAATCCAT
131 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAA-TGAATGAAGATCATTACTAGAATCCAT
* * * *
260558 TTTTGTCACAATTGAGG--C--ACTTAGACTTTACAAAAATTGGTGGGAAGAAAGTCTTTCTTAT
195 GTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAC
* * *
260619 GAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGGCTAAGTTTATGGTGCCAAATCCTGAA
260 GAAACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAA
* * * * * *
260684 AAGAATGGGGATTAGTATGACTATTTATATTTATCTTATTCAAGAGATAAACTTTGATTCTATCG
325 AAGAATGGGGATTAGTATGATTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCA
* * * *
260749 AAAATGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGTGAAAATGTCACGTATCCCAATGAAA
390 AAAATGGTTGAAAGAAATGCTTTTCTTGCGAC-CCAAAGCGACAATGTCATGTATCCTAATGAAA
* *
260814 GGAATGTGTTTCTGGTTTTCA
454 GGAATGTGTTTTTGGTTCTCA
* * * * *
260835 ATCATGAAAAGAATGGAGACTGTTACAAAAATAAATGCTTGCCTTATTTAAAGGATGAACTTTGA
1 ATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGA
* * *
260900 TTTTAAGAAAAATAGGGCAAAGAAAAAATTTCCATGCAAAATAAAATCAACAATATCATTTATCC
66 TTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAATAAAATCATCAATATCATTTATCC
260965 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACGAAATGAATGAAGATCATTACTAGAATCCAT
131 TAATGAGGAGAATGTGTTTATAGTGCCTAATCAC-AAATGAATGAAGATCATTACTAGAATCCAT
* * *
261030 GTTTGTCACAATTAAGGCACGAACTTAGGCTTCACAAAAATTGGTGGGAAAAAAGCCTTTCTTAC
195 GTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAC
* * *
261095 GAAACCAAAGCATCAATATCGTGTATCCTTAGTAGAAGACTAAGTTTATGGTGCCTAATCTTGAA
260 GAAACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAA
* * * * *
261160 AAGAATGAGGATTAGTATGATTGTTCGTGCTTGTCTTATTTAAGAGATAAACTCTGATTCTATCA
325 AAGAATGGGGATTAGTATGATTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCA
* *** * * *
261225 AAAATTGTTGAAAGAAATGCTTTTCTTGCGACCCCAAAGCTTGAATGTTATATATCCTAAAGAAA
390 AAAATGGTTGAAAGAAATGCTTTTCTTGCGA-CCCAAAGCGACAATGTCATGTATCCTAATGAAA
*
261290 GGAATGTGTTTTTGGTTCCCA
454 GGAATGTGTTTTTGGTTCTCA
* * *** * * *
261311 ATCATGAAAAGAATGGAGACTATTACAAGAGTCAATGCTTATTTTTTTTAACGGATGAATTTTGA
1 ATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGA
* * * ** *
261376 TTTTAAGGAAAATAGGACAAAGAAAAGATTTTCAAGCAAAGGAAAATCATCAATATCCTTTATCC
66 TTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAATAAAATCATCAATATCATTTATCC
* *
261441 TAATGAGGAGAATTTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCTAT
131 TAATGAGGAGAATGTGTTTATAGTGCCTAATCAC-AAATGAATGAAGATCATTACTAGAATCCAT
* * *
261506 GTTTGTCACAACTGAGGCACGAACTTGGGCTTTACAAAAATTAGTGGGAAGAAAGCCTTTCTTAC
195 GTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAC
* * *
261571 GAAGCCAAAGCTTCAATATCATGTATCCTTATTTGAAGACTAAGTTTATGGTGCCTAATCCTG-A
260 GAAACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAA
* * *
261635 AAGAAATGGGGGTTAGTGTGATTATTCATGTTTATCTTATTTAAGAGATAAACTTTGATTCTATC
325 AAG-AATGGGGATTAGTATGATTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATC
* *
261700 AAAAATGGTTGAAAGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTTATGTATCCTAATGAA
389 AAAAATGGTTGAAAGAAATGCTTTTCTTGCGACCC-AAAGCGACAATGTCATGTATCCTAATGAA
* *
261765 AAGAATGTGTTTATT-GCTCAT-A
453 AGGAATGTGTTT-TTGGTTC-TCA
* * * * *
261787 ATCATAAAAAGAATAGAGACTATTATGAGAATCAATACTTGTCTTATTTAAGGGATG-ACTTTGA
1 ATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGA
* * * *
261851 TTTTAAGGAAAATAGGGCAAAGAGAATATTTCAATGCAATAA-AAAATCATCAATATTATTTATC
66 TTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAA-AATAAAATCATCAATATCATTTATC
* * *
261915 CTAATGAGAAGAATATGTTTATAGTGCCTAATCAC-AATGTCAATGAAGATCATTACAAGAATCC
130 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAATG--AATGAAGATCATTACTAGAATCC
* * * * *
261979 ATGTTTGTCACAAATGAGGCATGAGCTTAGAG-TTTATAAAAATTGGTGGGAAAAAAGCCTTTCT
193 ATGTTTGTCACAATTGAGGCACGAACTTAG-GCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCT
* * * * *
262043 TACGAAACCAAAGCATCAATATCGTGTATCATTATGAGAAGACTATGTTTATGGTGCCTAATCTT
257 TACGAAACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCT
* * * *
262108 GAAAAAAATGGGGATTAGGATGATTATTCATGTTTGTATTGTTTGTATTTTTTAAGAGACAAACT
322 GAAAAGAATGGGGATTAGTATGATTATTCA----TGT-TTGTCT-TA---TTTAAGAGATAAACT
* * * *
262173 TTGATTCTTTCAAAAATGGTTGGAAGAAATGCTTTTCTTGCAAGCCCAAAGC-ATCAATGTCAGG
378 TTGATTCTATCAAAAATGGTTGAAAGAAATGCTTTTCTTGCGA-CCCAAAGCGA-CAATGTCATG
* *
262237 TATCCTAATGAAAGGAATTTGTTTTTGGTTCCCA
441 TATCCTAATGAAAGGAATGTGTTTTTGGTTCTCA
* * * * * *
262271 ATTAGGAAAAGAATAGAGACTATTATGAGAATCAATGCTTGCCTTATTTAAAGGA-CAGACTTTG
1 ATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGGATGA-ACTTTG
* ** *
262335 ATTTTAAGTAAAATAGGGTGAAGAAAAGATTTACATGCAAAAGT-AAATCATCAATATCATTTAT
65 ATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAA-TAAAATCATCAATATCATTTAT
* ** *
262399 CCTAATGAGGAGAATGTATTTATAGTGTTTAATCACAAAATGAATGAAGATCATTTA-TAGAACC
129 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCAC-AAATGAATGAAGATCA-TTACTAGAATC
* * *
262463 CATGTTTGTCACAACTGAGGCACAAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGGCTTTCT
192 CATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCT
* * *
262528 TCCAAAACCAAAGCTTCAATATCATGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCT
257 TACGAAACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCT
*
262593 GAAAAGAATGGTGATTAGT
322 GAAAAGAATGGGGATTAGT
262612 TTGTGTAGGC
Statistics
Matches: 1939, Mismatches: 267, Indels: 73
0.85 0.12 0.03
Matches are distributed among these distances:
470 122 0.06
471 155 0.08
472 130 0.07
473 9 0.00
474 150 0.08
475 283 0.15
476 687 0.35
477 3 0.00
479 3 0.00
480 4 0.00
481 2 0.00
483 2 0.00
484 145 0.07
485 237 0.12
486 3 0.00
487 4 0.00
ACGTcount: A:0.36, C:0.13, G:0.18, T:0.32
Consensus pattern (474 bp):
ATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGA
TTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAATAAAATCATCAATATCATTTATCC
TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAATGAATGAAGATCATTACTAGAATCCATG
TTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACG
AAACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAA
AGAATGGGGATTAGTATGATTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCAA
AAATGGTTGAAAGAAATGCTTTTCTTGCGACCCAAAGCGACAATGTCATGTATCCTAATGAAAGG
AATGTGTTTTTGGTTCTCA
Found at i:263177 original size:20 final size:20
Alignment explanation
Indices: 263151--263210 Score: 75
Period size: 20 Copynumber: 3.0 Consensus size: 20
263141 TTTTACCTAG
*
263151 ATGTATCGATACATTTTTCA
1 ATGTATCGATACATTTATCA
* * *
263171 GTGTATCGATACATGTATGA
1 ATGTATCGATACATTTATCA
263191 ATGTATCGATACATTCTATC
1 ATGTATCGATACATT-TATC
263211 TTTTTACCCA
Statistics
Matches: 32, Mismatches: 7, Indels: 1
0.80 0.17 0.03
Matches are distributed among these distances:
20 29 0.91
21 3 0.09
ACGTcount: A:0.30, C:0.15, G:0.15, T:0.40
Consensus pattern (20 bp):
ATGTATCGATACATTTATCA
Found at i:263245 original size:71 final size:70
Alignment explanation
Indices: 263120--263255 Score: 209
Period size: 71 Copynumber: 1.9 Consensus size: 70
263110 TACATTTTCC
* * *
263120 AATGTATTGATACATTATTTCTTTTACCTAGATGTATCGATACATTTTTCAGTGTATCGATACAT
1 AATGTATCGATACATTATATCTTTTACCCAGATGTATCGATACATTTTTCAGTGTATCGATACAT
263185 GTATG
66 GTATG
* * *
263190 AATGTATCGATACATTCTATCTTTTTACCCATATGTATCGATACATTTTTTAGTGTATCGATACA
1 AATGTATCGATACATTATATC-TTTTACCCAGATGTATCGATACATTTTTCAGTGTATCGATACA
263255 T
65 T
263256 CTAGTTAAAA
Statistics
Matches: 59, Mismatches: 6, Indels: 1
0.89 0.09 0.02
Matches are distributed among these distances:
70 18 0.31
71 41 0.69
ACGTcount: A:0.29, C:0.15, G:0.12, T:0.44
Consensus pattern (70 bp):
AATGTATCGATACATTATATCTTTTACCCAGATGTATCGATACATTTTTCAGTGTATCGATACAT
GTATG
Found at i:271785 original size:42 final size:42
Alignment explanation
Indices: 271732--271841 Score: 175
Period size: 42 Copynumber: 2.6 Consensus size: 42
271722 AAGAGAAAGA
**
271732 AGAGAGAGGAGGGATGATAGGAGGAGAGACAGGAGAAATAGT
1 AGAGAGAGGAGGGATGATAGGAGGAGAGACAGGAGAAATAAC
* *
271774 AGAGATAGGAGGGATGATAGGAGGAGAGACAGGAGAGATAAC
1 AGAGAGAGGAGGGATGATAGGAGGAGAGACAGGAGAAATAAC
*
271816 AGAGAGAGGAAGGATGATAGGAGGAG
1 AGAGAGAGGAGGGATGATAGGAGGAG
271842 GAGAGAAAAA
Statistics
Matches: 62, Mismatches: 6, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
42 62 1.00
ACGTcount: A:0.43, C:0.03, G:0.45, T:0.09
Consensus pattern (42 bp):
AGAGAGAGGAGGGATGATAGGAGGAGAGACAGGAGAAATAAC
Found at i:276836 original size:123 final size:123
Alignment explanation
Indices: 276617--276865 Score: 471
Period size: 123 Copynumber: 2.0 Consensus size: 123
276607 ATCAAGAGGC
*
276617 CAAGACTCTTGTGGCGATCATTCCTTTTGGCTTATCAATCTTGTGATTGTGGCGCCATCCTTCAT
1 CAAGACTCTTGTGGCGATCATTCCTTTTGGCTTATCAATCTTGTGATTGTGGCACCATCCTTCAT
276682 CTCTAATCTATTCCATTTTGTTATTTTTTTCTGCTTCTTTCAATTTCTGTTCTTGCAT
66 CTCTAATCTATTCCATTTTGTTATTTTTTTCTGCTTCTTTCAATTTCTGTTCTTGCAT
276740 CAAGACTCTTGTGGCGATCATTCCTTTTGGCTTATCAATCTTGTGATTGTGGCACCATCCTTCAT
1 CAAGACTCTTGTGGCGATCATTCCTTTTGGCTTATCAATCTTGTGATTGTGGCACCATCCTTCAT
* *
276805 CTCTAATCTATTCCATTTTGTTATTTTTTTCTGTTTCTTTCAATTTTTGTTCTTGCAT
66 CTCTAATCTATTCCATTTTGTTATTTTTTTCTGCTTCTTTCAATTTCTGTTCTTGCAT
276863 CAA
1 CAA
276866 TAATTCTGTT
Statistics
Matches: 123, Mismatches: 3, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
123 123 1.00
ACGTcount: A:0.16, C:0.22, G:0.13, T:0.48
Consensus pattern (123 bp):
CAAGACTCTTGTGGCGATCATTCCTTTTGGCTTATCAATCTTGTGATTGTGGCACCATCCTTCAT
CTCTAATCTATTCCATTTTGTTATTTTTTTCTGCTTCTTTCAATTTCTGTTCTTGCAT
Found at i:285249 original size:13 final size:12
Alignment explanation
Indices: 285172--285253 Score: 67
Period size: 14 Copynumber: 6.3 Consensus size: 12
285162 CCAATTTGCC
285172 ATTTGTCAAGAA
1 ATTTGTCAAGAA
285184 ATGGTTGTCAAGAA
1 AT--TTGTCAAGAA
285198 ATTATCGTCAAGAA
1 ATT-T-GTCAAGAA
* *
285212 CTTCTGTCGAGAA
1 ATT-TGTCAAGAA
*
285225 TGTTTGTC-AGAA
1 -ATTTGTCAAGAA
285237 ACTTTGTCAAGAA
1 A-TTTGTCAAGAA
285250 ATTT
1 ATTT
285254 TCATCAATGT
Statistics
Matches: 58, Mismatches: 5, Indels: 14
0.75 0.06 0.18
Matches are distributed among these distances:
12 16 0.28
13 17 0.29
14 25 0.43
ACGTcount: A:0.34, C:0.12, G:0.20, T:0.34
Consensus pattern (12 bp):
ATTTGTCAAGAA
Found at i:285300 original size:28 final size:28
Alignment explanation
Indices: 285268--285671 Score: 422
Period size: 28 Copynumber: 14.2 Consensus size: 28
285258 CAATGTGACC
*
285268 CCTTTCAAAGCCCACAAGTCAGTAGCAT
1 CCTTTCAAAGCCCACAAGTCAGTGGCAT
*
285296 CCTTTTCAAAGCCCACAAGTTAGTGGCAT
1 CC-TTTCAAAGCCCACAAGTCAGTGGCAT
* *
285325 ACTTTCAAAGCCCACAAGCCAGTGGCAT
1 CCTTTCAAAGCCCACAAGTCAGTGGCAT
* * *
285353 CCTTTTAAAGCCCACAAGCCAGTGGTAT
1 CCTTTCAAAGCCCACAAGTCAGTGGCAT
*
285381 CCTTTCAAAGCCCACAAGTCAGTGGTAT
1 CCTTTCAAAGCCCACAAGTCAGTGGCAT
* *
285409 CCTTTGAAAGCCCACAAGT-TGTGGCAT
1 CCTTTCAAAGCCCACAAGTCAGTGGCAT
* *
285436 CATTTCAAAGCCTACAAGTCAGTGGCAT
1 CCTTTCAAAGCCCACAAGTCAGTGGCAT
* * *
285464 CATTTCAAAGCCCATAAGTTAGTGGCA-
1 CCTTTCAAAGCCCACAAGTCAGTGGCAT
* *
285491 CCATTTCAAAGCCCACAAAAT-AGTGGAAT
1 CC-TTTCAAAGCCCAC-AAGTCAGTGGCAT
**
285520 TATTTCAAAGCCCACAAGTCAGTGGCAT
1 CCTTTCAAAGCCCACAAGTCAGTGGCAT
*
285548 CCTTTCAAAGCCAACAAGTCAGTGGCA-
1 CCTTTCAAAGCCCACAAGTCAGTGGCAT
* * *
285575 CCATTTCAAAACCCATAAGTCAGTGGGAT
1 CC-TTTCAAAGCCCACAAGTCAGTGGCAT
* *
285604 ACCCTTTGAAAGCCCACACAAGTCGGTGGCAACT
1 --CCTTTCAAAG-CC-CACAAGTCAGTGGC-A-T
* *
285638 CTTTTCAAAGCCCACACAAGTTAGTGGCA-
1 CCTTTCAAAG-CC-CACAAGTCAGTGGCAT
285667 CCTTT
1 CCTTT
285672 TTTTTTTAAG
Statistics
Matches: 317, Mismatches: 45, Indels: 27
0.81 0.12 0.07
Matches are distributed among these distances:
27 28 0.09
28 209 0.66
29 32 0.10
30 6 0.02
31 5 0.02
32 35 0.11
33 1 0.00
34 1 0.00
ACGTcount: A:0.31, C:0.28, G:0.18, T:0.24
Consensus pattern (28 bp):
CCTTTCAAAGCCCACAAGTCAGTGGCAT
Found at i:285801 original size:45 final size:47
Alignment explanation
Indices: 285743--285850 Score: 121
Period size: 49 Copynumber: 2.3 Consensus size: 47
285733 AAATCCGATC
* *
285743 TCGCTGGCATTGAACCAACATATT-GGCACCTTT-CTTAGCCTAATG
1 TCGCTGGCCTTGAACCAACACATTAGGCACCTTTCCTTAGCCTAATG
* * ** *
285788 TCGCTAGCCTTGAATCAACACATTACTTCACTTTTCCCTTAGCCTAATG
1 TCGCTGGCCTTGAACCAACACATTA-GGCACCTTT-CCTTAGCCTAATG
285837 TCGCTGGCCTTGAA
1 TCGCTGGCCTTGAA
285851 TTGGGACATT
Statistics
Matches: 51, Mismatches: 8, Indels: 4
0.81 0.13 0.06
Matches are distributed among these distances:
45 20 0.39
47 6 0.12
49 25 0.49
ACGTcount: A:0.23, C:0.29, G:0.16, T:0.32
Consensus pattern (47 bp):
TCGCTGGCCTTGAACCAACACATTAGGCACCTTTCCTTAGCCTAATG
Found at i:286452 original size:51 final size:51
Alignment explanation
Indices: 286325--286470 Score: 206
Period size: 50 Copynumber: 2.9 Consensus size: 51
286315 AAAAGTCACA
* * *
286325 TTTTAACCCAGATGTATCAAAACATAT-TTCAATGTATCGATACATTCTATC
1 TTTTTACCCAGATGTATCGATACAT-TCTTCAATGTATCGATACATTCTATC
*
286376 -TTTTACCTAGATGTATCGATACATTCTTCAATGTATCGATACATTCTATC
1 TTTTTACCCAGATGTATCGATACATTCTTCAATGTATCGATACATTCTATC
* * *
286426 TTTTTACCCAGATGTATCGATACATTCTTTAATGTTTCAATACAT
1 TTTTTACCCAGATGTATCGATACATTCTTCAATGTATCGATACAT
286471 GTAGTTAAAA
Statistics
Matches: 85, Mismatches: 8, Indels: 4
0.88 0.08 0.04
Matches are distributed among these distances:
49 1 0.01
50 44 0.52
51 40 0.47
ACGTcount: A:0.31, C:0.19, G:0.09, T:0.41
Consensus pattern (51 bp):
TTTTTACCCAGATGTATCGATACATTCTTCAATGTATCGATACATTCTATC
Found at i:290587 original size:473 final size:473
Alignment explanation
Indices: 289566--290688 Score: 1476
Period size: 473 Copynumber: 2.4 Consensus size: 473
289556 CACGTTGCAA
* * * * *
289566 TAGTGTGATTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAAACAAACTTTGTTTCTATCAAAAACGGTTGAA
*
289631 AGAAATGCTTTTCTTGCGAC-CCTAAAGCATCAATGTCATGTATCTTAATGAAAGTAATGTATTT
66 AGAAATGCTTTTCTTGCGACACC-AAAGCATCAATGTCATGTATCATAATGAAAG-AATGTA-TT
* * * * * * *
289695 TTGGTTCCCAATCAGGAAAAGAATGGAGACTTTTATAAGAATAAATCCTTATCTTATTTAAAGGA
128 TAGGTTTCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATCCTTAGCTTATTTAAAGGA
* * ** * *
289760 TGAACTTTGATTTTAAGTACAATAGGGCAAAGAAAAGATTTACATGCAAAAGTAAATCCTTAATA
193 TGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTACATGCAAAAAAAAATCATCAATA
* *
289825 TCATTTATCCTGATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAACATTAC
258 TCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGAACATTAC
* * * * * *
289890 TAGAATCTACGTTTGTCACAATTGAGGCTCGAACTTGGGCTATACAAAAATTGGTGGAAAAAAAG
323 TACAATCCACGTTTGTCACAATAGAAGCACGAACTTAGGCTATACAAAAATTGGT-GAAAAAAAG
* * * * * * * * *
289955 TCTTTTTTATGAAACCAATGCTTCAATATCGTGTATCCTTGTTAGAAGACTATGTTTATGGTGCT
387 CCTTTCTTAGGAAACCAAAGCATCAATATCGTGTATCCTTCTGAGAAGACTAAGTTTATGGTGCC
* * *
290020 TAATCCTGAAAAGAATGGGGAT
452 TAATCCTAAAAAGAATGGGAAC
* * * **
290042 TAGTATGATTATTCATATTTGTCTT-TTTAATAGAA-AATTTTTGATTT-TATCAAAAACGGTTG
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGA-AACAAACTTTG-TTTCTATCAAAAACGGTTG
* * *
290104 AAAGAAATGCTTTTCTTGCGACACCAAAGCGAT-AATGTCA-CTATCCTAATGAATAGAATGTGT
64 AAAGAAATGCTTTTCTTGCGACACCAAAGC-ATCAATGTCATGTATCATAATGAA-AGAATGTAT
290167 TTAGGTTTCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAA-CGCTT-GCATTATTTAAA
127 TTAGGTTTCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATC-CTTAGC-TTATTTAAA
290230 GGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTACATGCAAAAAAAAATCATCA
190 GGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTACATGCAAAAAAAAATCATCA
**
290295 ATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATTAT
255 ATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGAACAT
* *
290360 TACTACAATCCATGTTTGTCACAATAGAAGCACGAACTTAGGCTTTACAAAAATTGGT-AAGAAG
320 TACTACAATCCACGTTTGTCACAATAGAAGCACGAACTTAGGCTATACAAAAATTGGTGAA-AA-
* * *
290424 AAAGCCTTTCTTAGGAAACTAAAGCATCAATATCGTGTATCTTTCTGAGAAGTCTAAGTTTATGG
383 AAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTGTATCCTTCTGAGAAGACTAAGTTTATGG
*
290489 TGCCTAGTCCTAAAAAGAAT-GGAAC
448 TGCCTAATCCTAAAAAGAATGGGAAC
* * *
290514 TAGTATGGCTATTCATGTTTGTCTTATTTAAGAAACAAACTATGTTTCTATAAAAAACGGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAAACAAACTTTGTTTCTATCAAAAACGGTTGAA
290579 AGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCATAAT-AAAGGGAATGTATTT
66 AGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCATAATGAAA--GAATGTATTT
** * *
290643 CTGCTTCCTAATCATGAAAAGAATGGAGATTGTTATGAGAATCAAT
129 AGGTTTCC-AATCATGAAAAGAATGGAGACTGTTATGAGAATCAAT
290689 GCTGGTCCTA
Statistics
Matches: 562, Mismatches: 67, Indels: 36
0.85 0.10 0.05
Matches are distributed among these distances:
471 2 0.00
472 37 0.07
473 358 0.64
474 38 0.07
475 97 0.17
476 30 0.05
ACGTcount: A:0.37, C:0.13, G:0.18, T:0.33
Consensus pattern (473 bp):
TAGTATGACTATTCATGTTTGTCTTATTTAAGAAACAAACTTTGTTTCTATCAAAAACGGTTGAA
AGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCATAATGAAAGAATGTATTTAG
GTTTCCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATCCTTAGCTTATTTAAAGGATGA
ACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTACATGCAAAAAAAAATCATCAATATCA
TTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGAACATTACTAC
AATCCACGTTTGTCACAATAGAAGCACGAACTTAGGCTATACAAAAATTGGTGAAAAAAAGCCTT
TCTTAGGAAACCAAAGCATCAATATCGTGTATCCTTCTGAGAAGACTAAGTTTATGGTGCCTAAT
CCTAAAAAGAATGGGAAC
Found at i:290878 original size:211 final size:211
Alignment explanation
Indices: 290514--290898 Score: 544
Period size: 211 Copynumber: 1.8 Consensus size: 211
290504 AGAATGGAAC
* * *
290514 TAGTATGGCTATTCATGTTTGTCTTATTTAAGAAACAAACTATGTTTCTATAAAAAACGGTTGAA
1 TAGTATGACTATTCATGTTTGTCTAATTTAAGAAACAAACTATGATTCTATAAAAAACGGTTGAA
290579 AGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCATAATAAAGGGAATGTATTTC
66 AGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCATAATAAAGGGAATGTATTTC
* * * *
290644 TGCTTCCTAATCATGAAAAGAATGGAGATTGTTATGA-GAATCAATGCTGGTCCTATTGTCGAGG
131 TGCTTCCCAAACAGGAAAAGAATGGAGACTGTTAT-ACGAATCAATGCTGGTCCTATTGTCGAGG
290708 TTGAACGCACATTGCGA
195 TTGAACGCACATTGCGA
* * * * * **
290725 TAGTATGATTATTGATGTTTGTCTAATTTAAGAGAA-AAACTTTGATTCTTTCAAAATTGGTTGA
1 TAGTATGACTATTCATGTTTGTCTAATTTAAGA-AACAAACTATGATTCTATAAAAAACGGTTGA
* * *
290789 AAGAAATGCTTTTCTTGCGACCCCAAAGCATCAATGTCATGTATCTTAATGAAA-GTAATGTAAT
65 AAGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCATAAT-AAAGGGAATGT-AT
*
290853 TT-TGGTTCCCAAACAGGAAAAGAATGGAGACTGTTATACGAATCAA
128 TTCTGCTTCCCAAACAGGAAAAGAATGGAGACTGTTATACGAATCAA
290899 AGCTTGCCTT
Statistics
Matches: 152, Mismatches: 18, Indels: 8
0.85 0.10 0.04
Matches are distributed among these distances:
210 1 0.01
211 142 0.93
212 9 0.06
ACGTcount: A:0.34, C:0.14, G:0.19, T:0.33
Consensus pattern (211 bp):
TAGTATGACTATTCATGTTTGTCTAATTTAAGAAACAAACTATGATTCTATAAAAAACGGTTGAA
AGAAATGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCATAATAAAGGGAATGTATTTC
TGCTTCCCAAACAGGAAAAGAATGGAGACTGTTATACGAATCAATGCTGGTCCTATTGTCGAGGT
TGAACGCACATTGCGA
Found at i:291623 original size:474 final size:475
Alignment explanation
Indices: 290725--297842 Score: 8416
Period size: 474 Copynumber: 15.1 Consensus size: 475
290715 CACATTGCGA
* * * * * *
290725 TAGTATGATTATTGATGTTTGTCTAATTTAAGAGAAAAACTTTGATTCTTTCAAAATTGGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * **
290790 AGAAATGCTTTTCTTGCGACCCCAAAGCATCAATGTCATGTATCTTAATGAAAGTAATGTAATTT
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
* * * * * *
290855 TGGTTCCCAAACAGGAAAAGAATGGAGACTGTTA-TACGAATCAAAGCTTGCCTTATTTAAAGGA
131 TGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGA-GAATCAATGCTTGCCTTATTTAAGGGA
* * * * *
290919 TGAACTTTGATTTTAAGTAAAATAGGGCAAAGAAAAGATTTACATGCAAAAGTACATCATTAATA
195 TG-ACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATA
* * * * *
290984 TCATTTATCCTGACGAGAAGAATGTGTTTATTA-TGCCTAATCACAGAATGAATGAAGATCATTA
259 TCATTTATCCTAATGAGGAGAATATGTTTA-TAGTGCCTAATCACAAAATGAATGAAGATCATTA
* * * * ** * *
291048 CTAGAATCTATGTTTGTCAAAATTGAGGCTCGAACTTGGGCTAAACAAAAATTGGTGGAAAAAAA
323 CTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAA
* * * *
291113 GCCTTTCTTGCGAAACCAATGCTTCATTATCATGTATCCTTATTAGAAAACTAAGTTTATGGTGC
388 GCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGC
* *
291178 CCAATCCTAAAAAGAATGGGGAC
453 CTAATCCTAAAAAGAATGGGGAT
* * * *
291201 TAGTATGATTATTCATGTTTATCTTATTTAAAAGACAAACTTTGATTCTATCAAAAATGGTTCAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * *
291266 AGAAATGCTTTTCTTGCAACCCTAAAGTGTCAATGTCATGTATCCTAATGAAAGAAATATGTTTC
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
* * *
291331 TGGTACATAATCATAAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGAT
131 TGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGAT
* * * * *
291396 GACTTTGATTTTAAGGAAATTAGGGCAAAGAGAACATTTCCATGCAAAAG-AAATCATTAATATT
196 GACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATC
* * * * *
291460 ATTTATTCTAATGAGAAGAATATGTTTATAGTGCCTAATCACAAAATTAATGAAGATCGTTATTA
261 ATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTA
* ** *
291525 GAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTTGTAAGAAGAAAGCT
326 GAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCC
* ** * * * *
291590 TTTCTTACGAAACCAAAGAGTCAATATCATGTATCCTTCTGAGAAGACTAAGTTTTTGGTGCCTA
391 TTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTA
*
291655 GTCCTAAAAA-AATGGGGAT
456 ATCCTAAAAAGAATGGGGAT
* * * *
291674 TAGTATGACTATTGATGTTTATCTTATTTAAGAGACAAACTTTGATTCTATAAAAAACGGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * *
291739 AGAAATGCTTTTCTTGCAACACC-AAAGCGTCAATATCATGTATCCTAATGAAGGGAATGTGTTT
66 AGAAATGCTTTTCTTGCGAC-CCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTT
* * *
291803 CTGGTTCCTAATCACGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGGA
130 TTGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGA
*
291868 TGACTTTGATTTTAAAGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATAT
195 TGACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATAT
* * *
291933 CATTTATCC-AATTGTGAAGAATATGTTTATAGTACCTAATCAC-AAATAGAATGAAGATCATTA
260 CATTTATCCTAA-TGAGGAGAATATGTTTATAGTGCCTAATCACAAAAT-GAATGAAGATCATTA
* * * * *
291996 CTAGAATCCATGTTTGTCACAACTGAGACATGAGCTTAGGTTTTACAAAAATTGGTGGGAAGAAA
323 CTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAA
* * *
292061 GCCTTCCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTGTATGGAGC
388 GCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGC
292126 CTAATCCTAAAAAGAATGGGGAT
453 CTAATCCTAAAAAGAATGGGGAT
* * * * *
292149 TAGTATGACTATTCTTGTTTGTTTTATTTAAGAGACAAACTTTGATTTTATCAAAAATAGCTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * *
292214 GGAATTG-TTTTCTTGTGACACC-AAAGCATCAATGTCATCTATCCTAATGAAAGGAA--TGTTT
66 AGAAATGCTTTTCTTGCGAC-CCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTT
* * * * * * * *
292275 ATGGTTCCCATTCATGAAAGGAATGGAGACTGTTATGAGAATTAATACTTGCCTTATTTAAGGGG
130 TTGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGA
* * * *
292340 TGAACTTT-ATTTTTTAGTG-AAATTGGGCAAAGAAAAGATTTTCC-TACAAAGGAAAATCATCA
195 TG-ACTTTGA-TTTTAAG-GAAAATAGGGCAAAGAAAAGA-TTTCCATGCAAAAGAAAATCATCA
* * * *
292402 ATATCATTTATCCTAATAAGGAGAATGTGTTTAGAGTGCATAATCACAAAATGAATGAAGATCAT
256 ATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCAT
* * * * * ** *
292467 GACTAGAATCTATGTTTGTCAAAATTGAGACTCGAACTTAGGCTAAACAAAAATTGGTGGAAAGA
321 TACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGA
* * * * *
292532 AAGCCTTTCTTGCGAAACCAATGCTTCATTATCATGTATCCTTATTAGAAAACTAAGTTAATGGT
386 AAGCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGT
*
292597 G-CTAATCCTGAAAAA-AATGGAGAT
451 GCCTAATCCT-AAAAAGAATGGGGAT
* * * * *
292621 CAGTATGATTATTCATGTTTATCTTATTTAAGAGACAAAATTTGATTCTATCAAAAATGGTTCAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * *
292686 AGAAATGCTTTTCTTGCGACCCTAAAGCGTAAATGTCATGTATCCTAATGAAAGAAATATGTTTT
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
* * *
292751 TGGTTCAC-AATCATAAAAAGAATGGAGACTGCTACGAGAATCAATGCTTGCCTTAATTAAGGGA
131 TGGTTC-CTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGA
* * * *
292815 TGACTTTGATTTTAAGGAAATTAGGGCAAAGAGAACA-TTCCATGCCAAAGAAAATCAGT-AATA
195 TGACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCA-TCAATA
* *
292878 TTATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAT
259 TCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
*
292943 TAGAATCCATGTTTGTCGCAATTGAGGCACGAACTTAGGCTTTACAAAAATT--TGGAAGAAGAA
324 TAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGG--GAAGAA
* * * * * *
293006 AACCTTTCTTACGAAACCAAAGCATCAATATTGTGTATCCTTCTGAGAAGACTAAGTTTATGGTG
387 AGCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTG
* *
293071 CCTAGTCCTAAAAAAAATGGGGAT
452 CCTAATCCTAAAAAGAATGGGGAT
* * *
293095 TAGTATGACTATTCATATTTGTCTTATATAAGAGACAAACTTTGATTCTAT-AAAAAGCGGTTGA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAA-TGGTTGA
* *
293159 AAGAAATGCTTTTCTTGCGACACC-AAAGCGTCAATGACATGTATCCTAATGAATGGAATGTGTT
65 AAGAAATGCTTTTCTTGCGAC-CCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTT
* * *
293223 TTTGGTTCCTAATCACGAAAAGAATGGAGATTGTTACAAGAATCAATGCTTGCCTTATTTAAGGG
129 TTTGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGG
* **
293288 ATGACTTTGATTTTGAA-GAAAATAGGGCAAAGAGAAGATTTAGATGCAAAAGAAAATCATCAAT
194 ATGACTTTGATTTT-AAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAAT
* * * *
293352 ATCATTTATTC-AATTGTGGAGAATATGTTTATAGTACCTAATCACAAAGA-GAATAAAGATCAT
258 ATCATTTATCCTAA-TGAGGAGAATATGTTTATAGTGCCTAATCACAAA-ATGAATGAAGATCAT
* ** * *
293415 TACTAGAATCCATGTTTGTCACAACTGAGAAACGAACTTAGGCTTTACAAAAATTTGTGAGAAGA
321 TACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGA
* * *
293480 AAGCC-TTCTTTATGAAACCAATGCTTCGATATCGTGTATCCTTATTAGAAGACTAAGTGTATGG
386 AAGCCTTTC-TTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGG
* * *
293544 AGCCTAATCGTAAAAAGAATGGGCAT
450 TGCCTAATCCTAAAAAGAATGGGGAT
* * * *
293570 TAGTATGACTATTCCT-ATTGTTTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGCTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * *
293634 GGAATTG-TTTTCTTGTGACACC-AAAGCGTCAATGTCATTTATCCTAATGAAAGGAA--TGTTT
66 AGAAATGCTTTTCTTGCGAC-CCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTT
* * * * * * * *
293695 ATGGTTCCCATTCATGAAAGGAATGGAAACTATTATGAGAATTAATGCTTGCCTTATTTAAGGGA
130 TTGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGA
* * * * * *
293760 TGAACTTT-ATTTTTTAGTGAAATTA-GGCAAAGAAAAGATTTTCC-TACAAAGGAAGATCATTA
195 TG-ACTTTGA-TTTTAAG-GAAAATAGGGCAAAGAAAAGA-TTTCCATGCAAAAGAAAATCATCA
* * * * *
293822 ATATCATTTATCCTAATAAGGAGAATGTGTTTAGAATGCCTAATCACAAAATGAATAAAGATCAT
256 ATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCAT
* * * * ** *
293887 TACTAGAATCTATGTTTGTCAAAATTGAGGCTCGAACTTGGGCTAAACAAAAATTGGTGGAAAGA
321 TACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGA
* * * * * *
293952 AAGCCTTTCTTGCAAAACCAATGTTTCATTATCATGTATCCTTATTAGAAAACTAAGTTTATGGT
386 AAGCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGT
294017 GCCTAATCCTGAAAAA-AATGGGGAT
451 GCCTAATCCT-AAAAAGAATGGGGAT
* * *
294042 TAGTATGATTATTCATGTTTATCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTTAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * *
294107 AGAAATGCTTTTCTTACAACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGAAATGTGTTTC
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
* * * *
294172 TGGTTCATAATCATAAAAAGAATGGAGACTATTACGAGAATCAATGCTTGGCTTATTTAAGGGAT
131 TGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGAT
* * * * *
294237 GACTTTTATTTTAAGGAAATTAGGGCAAA-AAGAACATTTCCATGCAAAAGAAAGTCATTAATAT
196 GACTTTGATTTTAAGGAAAATAGGGCAAAGAA-AAGATTTCCATGCAAAAGAAAATCATCAATAT
* * * *
294301 TATTTATCCTAATAAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAGGATCATTACA
260 CATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACT
* * * * *
294366 AGAATCCGTGTTTGTCACAAATGAGGCACGAACTTAGACTTTACAAAAATTGGTGAGAAAAAAGC
325 AGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGC
* * ** ** * *
294431 ATTTCCTACGAAACCAAAACAACAATATCGTGTATCATTATGAGAAGACTATA-TTTATGGTGCC
390 CTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTA-AGTTTATGGTGCC
* *
294495 TAATCCTGAAAAGAATGGTGAT
454 TAATCCTAAAAAGAATGGGGAT
** * * *
294517 TAGTATGTTTTTTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATCCAAAATGGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * *
294582 ACAAATGCTTTTCTTGCAACCCTAAAGCATCAATGTCAAGTATCCTAAGGAAAGGAATGTGTTTT
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
* * * ** *
294647 TGGTTCCCAATCACGAAAAGAATGGAGACTATTTTGAGAATCAATGCTTGCCTTATTTATGGGAT
131 TGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGAT
* * * *
294712 AAACTTTGATTTTAAGTAAAACA-GGCAAAGAAAAG------AT--AAAAGTAAATCATCAATAT
196 -GACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATAT
* *
294768 CATTTATGCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACT
260 CATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACT
* * * *
294833 AGAATCCATGTTTGTCATAACTGAGGCATGAACTTAGGTTTTACAAAAATTGGTGGGAAGAAAGC
325 AGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGC
* * * * * * * *
294898 TTTTCTTACGAAACCAAAGCTTCAATATCTTGTATCCTTATTAGAAGGCTATGTTTAGGGCGTCT
390 CTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCT
* * *
294963 AATCCTGAAAATAATAGGGAT
455 AATCCTAAAAAGAATGGGGAT
* * * * *
294984 TAGTATGATTATTCATATTTGTCTTATTTAAGAGACAAACTTTGCTTCTATAAAAAATAGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * * * * * * *
295049 AGAAATACTTTTTTTACGACCCCAAAGCATCAGTATCATGTATCTTAGTGAAAGTAATGTGTTTT
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
* * ** * *
295114 TGGTTCCTAATCTTGAAAAGAATGGAGATTGTTTTGAGAATCAATGCTTGCCTTATTCAAAGGAT
131 TGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGAT
* * * *
295179 GAACTTTGATTTTAAGTAAACTAGGGCAAAGAAAAGATTTACATGCAAAAGTAAATCATCAATAT
196 G-ACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATAT
* * *
295244 CATTTATCCTAACT-AGGAGAATGTGTTTATAGTGCCTAATCATAAAATGAATAAAGATCATTAC
260 CATTTATCCTAA-TGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
* * * * * *
295308 TAGAATCTATGTTTGTCACAATTAAGGCTCGAACTTGGGCTATACAAAAATTGGTGGAAAGAAAG
324 TAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAG
* * * * *
295373 CCTTTTTTACGAAACCAATGCTTCTATATTGTGTATCCTTATTAGAAAACTGTA-TTTATGGTGC
389 CCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACT-AAGTTTATGGTGC
**
295437 CTAATCCTGTAAAGAATGGGGAT
453 CTAATCCTAAAAAGAATGGGGAT
* * * * *
295460 TAGAATAATTATTCATGTTTGTCTTTTTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * * *
295525 AGAAATCCTTTTCTTGCGACCCTAGAGGGACAATGTCACT-TATCCTAATGAATGGAATGCGTTT
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCA-TGTATCCTAATGAAAGGAATGTGTTT
* * * *
295589 TTGGTTTCC-AATCACGAAAAGAATGGAGACTGTTATGAGAATCAATGGTTCCCTTATTTAA---
130 TTGG-TTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGG
* * * ** *
295650 A-G--GTTGATTTTAAGGAAAATAGGGCGAAG-AAAGATTTACATGCAAAA-AATTTTATCAATA
194 ATGACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATA
*
295710 TCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
259 TCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
* * * *
295775 TAGAATCCATGTTTGTCATAATTAAGGCATGAACTTAGACTTTACAAAAATT-GTGGGAAGAAAG
324 TAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAG
* * ** *
295839 CCTTTCTTACGAAACCAAAGCATCAA-ATTATGTATCCTTATGAGAAGACTAAGTTTATGGTGCC
389 CCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCC
* *
295903 TAATCCTAAAAAGATTAGGGAT
454 TAATCCTAAAAAGAATGGGGAT
* * * *
295925 TAGTATGACTATTCATGTTTATTTTATTTAAGAGACAAACTTTAATTCTATAAAAAACT-GTTGA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAA-TGGTTGA
* * * * * *
295989 AAGAAATGCTTTTCTTGCGGCACC-AAAGCATCAATGTCATGTATCATGATGAAAGGATTGCGTT
65 AAGAAATGCTTTTCTTGCGAC-CCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTT
* * * * *
296053 TTTGGTTCCTAATTATGAAAAAAATGGAGGCTGTTATGAGAATCAATG---GTCTTATTTAAGGG
129 TTTGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGG
* ** *
296115 ATGAAATTT-ATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGGTAGAGAAAATCATCAAT
194 ATG-ACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAAT
* ** ** * * *
296179 ATTATTTATATTTTTGTGGAGAATAAGTTTATAGTGCCTAATTACAAAGA-GAATGAAGATCATT
258 ATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAA-ATGAATGAAGATCATT
* *
296243 ACTAGAATCCATGTTTGTCACAACTGAGGCACGAACTTAGGCATTACAAAAATTGGTGGGAAGAA
322 ACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAA
* * * * *
296308 AGCCTTCCATACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTGTGTGGAG
387 AGCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTG
*
296373 CCTAATCCTGAAAAGAATGGGGAT
452 CCTAATCCTAAAAAGAATGGGGAT
**
296397 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAAAAGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * * * * *
296462 GGAAATG-TTTTCTTGTGGCAGC-GAAGTGTCATTGTCATGTATCCTAATGAAATGAATGTGTTT
66 AGAAATGCTTTTCTTGCGAC-CCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTT
* * ** *
296525 TTGGTTCCTAATCATGAAAA-AATGGAGACTGTTACTATAATCAATGCTTATCATATTTAAGGGA
130 TTGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGA
* *
296589 TAAACTTT-ATTTTTAAGTG-AAATAGGGCAAAGAAAAGATTTTCAT--ATAAAGAAAAATCATC
195 T-GACTTTGA-TTTTAAG-GAAAATAGGGCAAAGAAAAGATTTCCATGCA-AAAG-AAAATCATC
* * * * * * *
296650 AGTATCATTTATCTTGATAAGGAGAATGTGTTTATAGTGCCTAATTATAAAATGAATGAAGATCA
255 AATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCA
* * * * * ** *
296715 TTACTAGAATCTATGTTTTTCACAATTAAGGCTCGAACTTGGGCTAAACAAAAATTGGTGGAAAG
320 TTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAG
* * *
296780 AAAGCATTTCTTATGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGA
385 AAAGCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGG
* *
296845 TGCCTAATCCTGAAAGGAATGGGGAT
450 TGCCTAATCCTAAAAAGAATGGGGAT
* * *
296871 TAGTATGATTATT-AGCGTTTATCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGA
1 TAGTATGACTATTCA-TGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGA
* *
296935 AAGAAATGCTTTTCTTGCGACCCTAAAGCATCAATGTCATGTATCTTAATGAAAGGAATGTGTTT
65 AAGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTT
* * * * * *
297000 TTGGTTCATAATCATAAAAATAATGGAGACTGTTATGAAAATCAATGAC-TGCCTTATTTAATGG
130 TTGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATG-CTTGCCTTATTTAAGGG
* * * *
297064 ATGACTTTGATTTTAAGGAAAATAGGGTAAAGAGAATATTTCCGTGC-AAA-AAAAT-ATTCAAT
194 ATGACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCA-TCAAT
* * * *
297126 CTTATTTATCCTAATGAGGAGAATATGTTTATAGTGCGTAATCACAAAATGAATGAAGATCACTA
258 ATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTA
* *
297191 CTAGAATCCATGTTTGTCACAATTCAGGCACTAACTTAGGCTTTACAAAAATTGGTGGGAAGAAA
323 CTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAA
* * * * * * * *
297256 GCCTTTCTTTC-AAACTACA-GCATCATTATCGTGTATCGTTATGAGAAGACTATGTTAATGGTG
388 GCCTTTCTTACGAAACCA-ATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTG
* * *
297319 CCTAATCTTGAAAAGAATAGGGAT
452 CCTAATCCTAAAAAGAATGGGGAT
* * * * *
297343 TAGTATGGCTATTTATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAGAAACGATTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * * *
297408 AGAAATGCTTTTCTTGTGGCACTAAAGCGACAATGTCACGTATCCTTATGAAAGGAATGTGTTTT
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
* * * *
297473 T--TTCCTTAATC-TGGAAAATAATAGAGACTGTTACAAGAATCAATGCTTGCCTTATTTAATGG
131 TGGTTCC-TAATCAT-GAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGG
* * * * *
297535 ATGATTTTTGATTTTAAAGAAAATAGGGCAAATAGAAGATTTCCATGCAAAAAAAAATCATCAAT
194 ATGA-CTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAAT
* * * **
297600 ATTATTTATCCTAATGAGGAGAATATGTTTATTGTGCCTAATTACAATGTGAATGAAGATCATTA
258 ATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTA
* * * * * * * *
297665 CAAGAATCCATGTTTGTCACAAATGAGGCCCGAACTGAGACTTTATAAAAATTAGTTGGAAGAAA
323 CTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAA
* * * * * * *
297730 GCCTTTCTTAAGAAACCAAAGCATCAATATCATGTAAT-GTTATGAGAAGACTATGTTTATGGTG
388 GCCTTTCTTACGAAACCAATGCTTCAATATCGTGT-ATCCTTATTAGAAGACTAAGTTTATGGTG
* * *
297794 CTTATTCCTGAAAAGAATGGGGA-
452 CCTAATCCTAAAAAGAATGGGGAT
*
297817 TATGTATGACTATTTATGTTTGTCTT
1 TA-GTATGACTATTCATGTTTGTCTT
297843 CCTGCAACCT
Statistics
Matches: 5682, Mismatches: 833, Indels: 255
0.84 0.12 0.04
Matches are distributed among these distances:
462 9 0.00
464 6 0.00
465 193 0.03
466 37 0.01
467 501 0.09
468 52 0.01
469 41 0.01
470 137 0.02
471 217 0.04
472 700 0.12
473 952 0.17
474 1202 0.21
475 978 0.17
476 647 0.11
477 10 0.00
ACGTcount: A:0.36, C:0.13, G:0.18, T:0.32
Consensus pattern (475 bp):
TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
TGGTTCCTAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGAT
GACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATC
ATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTA
GAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCC
TTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTA
ATCCTAAAAAGAATGGGGAT
Found at i:291899 original size:158 final size:154
Alignment explanation
Indices: 291263--293320 Score: 502
Period size: 158 Copynumber: 13.0 Consensus size: 154
291253 AAAAATGGTT
* * *
291263 CAAAGAAATGCTTTTCTTGCAACCCTAAAGTGTCAATGTCATGTATCCTAATGA-AAGAAATATG
1 CAAAGAAA-GCTTTTCTTGCAAACC-AAAGCGTCAATATCATGTATCCTAATGAGAAG-AATATG
* * * *
291327 TTTCTGGTACATAATCATAAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAG
63 TTTCTGGTGCCTAATCA-CAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAG
* *
291392 GGATGACTTTGATTTTAAGGAAATTAGGG
127 GGATGACTTTGATTTTAA-AAAAATAGGG
* * ** * * * * * *
291421 CAAAGAGAA-CATTTCCATGCAAAAGAAATCATTAATATTATTTATTCTAATGAGAAGAATATGT
1 CAAAGA-AAGC-TTTTCTTGCAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGT
* * * * * ** * * * ** * *
291485 TTATAGTGCCTAATCACAAAATTAATGAAGA-TCGTTATTAGAATCCATGTTTGTCACAATTGAG
64 TTCTGGTGCCTAATCACAAAA-GAATGGAGACT-ATTACGAGAATCAATGCTTGCCTTATTTAAG
* * * ** * ** *
291549 GCACGAACTTAGGCTTTACAAAAATTTGT
127 GGATG-ACTTTGATTTTAAAAAAATAGGG
* * * ** * *
291578 AAGAAGAAAGCTTTTCTTACGAAACCAAAGAGTCAATATCATGTATCCTTCTGAGAAGACTAAGT
1 CA-AAGAAAGCTTTTCTTGC-AAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGT
* * * * * * * ** ** * ** *
291643 TTTTGGTGCCTAGTC-CTAAAAAAATGGGGATTAGTATGACTATTGATGTTTATCTTATTTAAGA
64 TTCTGGTGCCTAATCAC-AAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGG
** * *
291707 GACAAACTTTGATTCTATAAAAAA-CGGTTG
128 GA-TGACTTTGATTTTA-AAAAAATAGG--G
* *
291737 -AAAGAAATGCTTTTCTTGCAACACCAAAGCGTCAATATCATGTATCCTAATGA-AGGGAATGTG
1 CAAAGAAA-GCTTTTCTTGCAA-ACCAAAGCGTCAATATCATGTATCCTAATGAGA-AGAATATG
*
291800 TTTCTGGTTCCTAATCACGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAG
63 TTTCTGGTGCCTAATCAC-AAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAG
291865 GGATGACTTTGATTTTAAAGAAAATAGGG
127 GGATGACTTTGATTTTAAA-AAAATAGGG
* * * ** * * * *
291894 CAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC-AATTGTGAAGAATATG
1 CAAAG-AAAGCTTTTCTTGC-AAACCAAAGCGTCAATATCATGTATCCTAA-TGAGAAGAATATG
* * * * * * * * ** ** *
291958 TTTATAGTACCTAATCACAAATAGAATGAAGA-TCATTACTAGAATCCATGTTTGTCACAACTGA
63 TTTCTGGTGCCTAATCACAAA-AGAATGGAGACT-ATTACGAGAATCAATGCTTGCCTTATTTAA
** * * * *
292022 GACATGAGCTTAGGTTTTACAAAAATTGGTG
126 GGGATGA-CTTTGATTTTAAAAAAATAGG-G
** * * * * * * * * * * *
292053 GGAAGAAAGCCTTCCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTG
1 CAAAGAAAGCTTTTCTTGC-AAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTT
* * * * * * * * * * **
292118 TATGGAGCCTAATC-CTAAAAAGAATGGGGATTAGTATGACTATTC-TTGTTTGTTTTATTTAAG
65 TCTGGTGCCTAATCAC--AAAAGAATGGAGACTATTACGA-GAATCAATGCTTGCCTTATTTAAG
* ** * *
292181 AGACAAACTTTGATTTTATCAAAAATAGCTG
127 GGA-TGACTTTGATTTTA-AAAAAATAG-GG
* * * * * * * *
292212 -AAGGAATTG-TTTTCTTGTGACACCAAAGCATCAATGTCATCTATCCTAATGA-AAGGA-ATGT
1 CAAAGAA-AGCTTTTCTTG-CAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGT
* * * * * * * * * *
292273 TTATGGTTCCCATTCATGAAAGGAATGGAGACTGTTATGAGAATTAATACTTGCCTTATTTAAGG
64 TTCTGGTGCCTAATCA-CAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGG
* *** *
292338 GGTGAACTTT-ATTTTTTAGTGAAATTGGG
128 GATG-ACTTTGA--TTTTAAAAAAATAGGG
* * * ** * * * * * *
292367 CAAAGAAAAGATTTTCCTACAAAGGAAAATCATCAATATCATTTATCCTAATAAGGAGAATGTGT
1 CAAAG-AAAGCTTTTCTTGCAAA-CCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGT
* * * * * * * * ** *
292432 TT-AGAGTGCATAATCACAAAATGAATGAAGA-TCATGACTAGAATCTATGTTTGTCAAAATT--
64 TTCTG-GTGCCTAATCACAAAA-GAATGGAGACT-ATTACGAGAATCAATGCTTGCCTTATTTAA
* * ** * *
292493 GAGACTCGAACTTAG-GCTAAACAAAAATTGGTG
126 GGGA-T-G-ACTTTGATTTTAA-AAAAATAGG-G
* * * * * * * *
292526 GAAAGAAAGCCTTTCTTGCGAAACCAATGCTTCATTATCATGTATCCTTATTAGAA-AACTAAGT
1 CAAAGAAAGCTTTTCTTGC-AAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAA-TATGT
** * * * * * * **
292590 TAATGGTG-CTAATC-CTGAAAAAAATGGAGA-TCAGTATGATTATTC-ATGTTTATCTTATTTA
64 TTCTGGTGCCTAATCAC--AAAAGAATGGAGACT-ATTACGA-GAATCAATGCTTGCCTTATTTA
* ** * * * *
292651 AGAGACAAAATTTGATTCTATCAAAAAT-GGTT
125 AGGGA-TGACTTTGATTTTA-AAAAAATAGG-G
* * * *
292683 CAAAGAAATGCTTTTCTTGCGACCCTAAAGCGTAAATGTCATGTATCCTAATGA-AAGAAATATG
1 CAAAGAAA-GCTTTTCTTGCAAACC-AAAGCGTCAATATCATGTATCCTAATGAGAAG-AATATG
* * * ** *
292747 TTTTTGGTTCAC-AATCATAAAAAGAATGGAGACTGCTACGAGAATCAATGCTTGCCTTAATTAA
63 TTTCTGGTGC-CTAATCA-CAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAA
* *
292811 GGGATGACTTTGATTTTAAGGAAATTAGGG
126 GGGATGACTTTGATTTTAA-AAAAATAGGG
* * * ** * * * *
292841 CAAAGAGAA-CATTCCATGCCAAAGAAAATCAGT-AATATTATTTATCCTAATGAGGAGAATATG
1 CAAAGA-AAGCTTTTCTTG-CAAACCAAAGC-GTCAATATCATGTATCCTAATGAGAAGAATATG
* * * ** * * * ** * *
292904 TTTATAGTGCCTAATCACAAAATGAATGAAGA-TCATTATTAGAATCCATGTTTGTCGCAATTGA
63 TTTCTGGTGCCTAATCACAAAA-GAATGGAGACT-ATTACGAGAATCAATGCTTGCCTTATTTAA
* * * ** * **
292968 GGCACGAACTTAGGCTTTACAAAAATTTGG
126 GGGATG-ACTTTGATTTTAAAAAAATAGGG
* * * * * ** ** * *
292998 AAGAAGAAAACCTTTCTTACGAAACCAAAGCATCAATATTGTGTATCCTTCTGAGAAGACTAAGT
1 CA-AAGAAAGCTTTTCTTGC-AAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGT
* * * * * * * * * * *
293063 TTATGGTGCCTAGTC-CTAAAAAAAATGGGGATTAGTATGACTATTCATAT--TTGTCTTATATA
64 TTCTGGTGCCTAATCAC--AAAAGAATGGAGACTATTACGA-GAATCA-ATGCTTGCCTTATTTA
* ** * * **
293125 AGAGACAAACTTTGATTCTATAAAAAGCGGTTG
125 AGGGA-TGACTTTGATTTTAAAAAAATAGG--G
* * *
293158 -AAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGA-CATGTATCCTAATGA-ATGGAATGT
1 CAAAGAAA-GCTTTTCTTGC-AAACCAAAGCGTCAAT-ATCATGTATCCTAATGAGA-AGAATAT
* * * * *
293220 GTTTTTGGTTCCTAATCACGAAAAGAATGGAGATTGTTACAAGAATCAATGCTTGCCTTATTTAA
62 GTTTCTGGTGCCTAATCAC-AAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAA
*
293285 GGGATGACTTTGATTTTGAAGAAAATAGGG
126 GGGATGACTTTGATTTT-AAAAAAATAGGG
293315 CAAAGA
1 CAAAGA
293321 GAAGATTTAG
Statistics
Matches: 1318, Mismatches: 472, Indels: 220
0.66 0.23 0.11
Matches are distributed among these distances:
155 4 0.00
156 72 0.05
157 326 0.25
158 634 0.48
159 275 0.21
160 7 0.01
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.31
Consensus pattern (154 bp):
CAAAGAAAGCTTTTCTTGCAAACCAAAGCGTCAATATCATGTATCCTAATGAGAAGAATATGTTT
CTGGTGCCTAATCACAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGGAT
GACTTTGATTTTAAAAAAATAGGG
Found at i:292772 original size:947 final size:945
Alignment explanation
Indices: 290725--297842 Score: 8329
Period size: 947 Copynumber: 7.5 Consensus size: 945
290715 CACATTGCGA
* * * * * *
290725 TAGTATGATTATTGATGTTTGTCTAATTTAAGAGAAAAACTTTGATTCTTTCAAAATTGGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * **
290790 AGAAATGCTTTTCTTGCGACCCCAAAGCATCAATGTCATGTATCTTAATGAAAGTAATGTAATTT
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
* * * * *
290855 TGGTTCCCAAACAGGAAAAGAATGGAGACTGTTA-TACGAATCAAAGCTTGCCTTATTTAAAGGA
131 TGGTT-CCAATCATGAAAAGAATGGAGACTGTTACGA-GAATCAATGCTTGCCTTATTTAAGGGA
* * * *
290919 TGAACTTTGATTTT-AAGTAAAATAGGGCAAAGAAAAGATTTACATGCAAAAGTACATCATTAAT
194 TG-ACTTTGATTTTAAAG-AAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAAT
* * * *
290983 ATCATTTATCCTGACGAGAAGAATGTGTTTATTA-TGCCTAATCACAGAATGAATGAAGATCATT
257 ATCATTTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAATGAATGAAGATCATT
* * * ** * *
291047 ACTAGAATCTATGTTTGTCAAAATTGAGGC-TCGAACTTGGGCTAAACAAAAATTGGTGGAAAAA
321 ACTAGAATCCATGTTTGTCACAATTGAGGCAT-GAACTTAGGCTTTACAAAAATTGGTGGGAAGA
* * * *
291111 AAGCCTTTCTTGCGAAACCAATGCTTCATTATCATGTATCCTTATTAGAAAACTAAGTTTATGGT
385 AAGCCTTTCTTACGAAACCAAAGCTTCAATATCATGTATCCTTATTAGAAGACTAAGTTTATGGT
* * * *
291176 GCCCAATCCTAAAAAGAATGGGGACTAGTATGATTATTCATGTTTATCTTATTTAAAAGACAAAC
450 GCCTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACAAAC
* * **
291241 TTTGATTCTATCAAAAATGGTTCAAAGAAATGCTTTTCTTGCAACCCTAAAGTGTCAATGTCATG
515 TTTGATTCTATCAAAAATGGTTGAAAGAAATGCTTTTCTTGCGACCC-AAAGCATCAATGTCATG
* * * * * * *
291306 TATCCTAATGAAAGAAATATGTTTCTGGTACATAATCATAAAAAGAATGGAGACTGTTACGAGAA
579 TATCCTAATGAAAGGAA-GTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTGTTATGAGAA
* *
291371 TCAATGCTTGCCTTATTTAAGGGATGACTTTGATTTTAAGGAAATTAGGGCAAAGAGAACATTTC
643 TCAATGCTTGCCTTATTTAAGGGATGACTTTGATTTTAAGGAAA-TAGGGCAAAGAAAAGATTTC
* * *
291436 CATGCAAAAG-AAATCATTAATATTATTTATTCTAATGAGAAGAATATGTTTATAGTGCCTAATC
707 C-TGCAAAAGAAAATCATCAATATTATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATC
* * *
291500 ACAAAATTAATGAAGATCGTTATTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTT
771 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTT
* * * * ** * *
291565 TACAAAAATTTGT-AAGAAGAAAGCTTTTCTTACGAAACCAAAGAGTCAATATCATGTATCCTTC
836 TACAAAAATTGGTGGA-AAGAAAGCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTA
* * * *
291629 TGAGAAGACTAAGTTTTTGGTGCCTAGTCCT-AAAAAAATGGGGAT
900 TTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
* * * *
291674 TAGTATGACTATTGATGTTTATCTTATTTAAGAGACAAACTTTGATTCTATAAAAAACGGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * *
291739 AGAAATGCTTTTCTTGCAACACC-AAAGCGTCAATATCATGTATCCTAATGAAGGGAATGTGTTT
66 AGAAATGCTTTTCTTGCGAC-CCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTT
* * *
291803 CTGGTTCCTAATCACGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATTTAAGGGA
130 TTGGTTCC-AATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGA
291868 TGACTTTGATTTTAAAGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATAT
194 TGACTTTGATTTTAAAGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATAT
* * * *
291933 CATTTATCC-AATTGTGAAGAATATGTTTATAGTACCTAATCAC-AAATAGAATGAAGATCATTA
259 CATTTATCCTAA-TGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT-GAATGAAGATCATTA
* * * *
291996 CTAGAATCCATGTTTGTCACAACTGAGACATGAGCTTAGGTTTTACAAAAATTGGTGGGAAGAAA
322 CTAGAATCCATGTTTGTCACAATTGAGGCATGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAA
* * * * *
292061 GCCTTCCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTGTATGGAGC
387 GCCTTTCTTACGAAACCAAAGCTTCAATATCATGTATCCTTATTAGAAGACTAAGTTTATGGTGC
* * *
292126 CTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCTTGTTTGTTTTATTTAAGAGACAAACTT
452 CTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACAAACTT
* * * * * * *
292191 TGATTTTATCAAAAATAGCTGAAGGAATTG-TTTTCTTGTGACACCAAAGCATCAATGTCATCTA
517 TGATTCTATCAAAAATGGTTGAAAGAAATGCTTTTCTTGCGAC-CCAAAGCATCAATGTCATGTA
* * * * *
292255 TCCTAATGAAAGGAA-TGTTTATGGTTCCCATTCATGAAAGGAATGGAGACTGTTATGAGAATTA
581 TCCTAATGAAAGGAAGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTGTTATGAGAATCA
* * * *
292319 ATACTTGCCTTATTTAAGGGGTGAACTTT-ATTTTTTAGTGAAATTGGGCAAAGAAAAGATTTTC
646 ATGCTTGCCTTATTTAAGGGATG-ACTTTGA-TTTTAAG-GAAATAGGGCAAAGAAAAGA-TTTC
* * * * * * *
292383 CTACAAAGGAAAATCATCAATATCATTTATCCTAATAAGGAGAATGTGTTTAGAGTGCATAATCA
707 CTGCAAAAGAAAATCATCAATATTATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCA
* * * * * **
292448 CAAAATGAATGAAGATCATGACTAGAATCTATGTTTGTCAAAATTGAGACTCGAACTTAGGCTAA
772 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTT
* * *
292513 ACAAAAATTGGTGGAAAGAAAGCCTTTCTTGCGAAACCAATGCTTCATTATCATGTATCCTTATT
837 ACAAAAATTGGTGGAAAGAAAGCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATT
* * * *
292578 AGAAAACTAAGTTAATGGTG-CTAATCCTGAAAAAAATGGAGAT
902 AGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
* * * * *
292621 CAGTATGATTATTCATGTTTATCTTATTTAAGAGACAAAATTTGATTCTATCAAAAATGGTTCAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * *
292686 AGAAATGCTTTTCTTGCGACCCTAAAGCGTAAATGTCATGTATCCTAATGAAAGAAATATGTTTT
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
* * *
292751 TGGTTCACAATCATAAAAAGAATGGAGACTGCTACGAGAATCAATGCTTGCCTTAATTAAGGGAT
131 TGGTTC-CAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGAT
* * * * *
292816 GACTTTGATTTTAAGGAAATTAGGGCAAAGAGAACA-TTCCATGCCAAAGAAAATCAGT-AATAT
195 GACTTTGATTTTAAAGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCA-TCAATAT
* * *
292879 TATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTATT
259 CATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACT
* *
292944 AGAATCCATGTTTGTCGCAATTGAGGCACGAACTTAGGCTTTACAAAAATT--TGGAAGAAGAAA
324 AGAATCCATGTTTGTCACAATTGAGGCATGAACTTAGGCTTTACAAAAATTGGTGG--GAAGAAA
* * ** * *
293007 ACCTTTCTTACGAAACCAAAGCATCAATATTGTGTATCCTTCTGAGAAGACTAAGTTTATGGTGC
387 GCCTTTCTTACGAAACCAAAGCTTCAATATCATGTATCCTTATTAGAAGACTAAGTTTATGGTGC
* * * * *
293072 CTAGTCCTAAAAAAAATGGGGATTAGTATGACTATTCATATTTGTCTTATATAAGAGACAAACTT
452 CTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACAAACTT
* * *
293137 TGATTCTAT-AAAAAGCGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGACATGT
517 TGATTCTATCAAAAA-TGGTTGAAAGAAATGCTTTTCTTGCGAC-CCAAAGCATCAATGTCATGT
* * * **
293201 ATCCTAATGAATGGAATGTGTTTTTGGTTCCTAATCACGAAAAGAATGGAGATTGTTACAAGAAT
580 ATCCTAATGAAAGGAA-GTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTGTTATGAGAAT
* * *
293266 CAATGCTTGCCTTATTTAAGGGATGACTTTGATTTTGAAGAAAATAGGGCAAAGAGAAGATTTAG
644 CAATGCTTGCCTTATTTAAGGGATGACTTTGATTTT-AAGGAAATAGGGCAAAGAAAAGATTT-C
* * * * *
293331 ATGCAAAAGAAAATCATCAATATCATTTATTC-AATTGTGGAGAATATGTTTATAGTACCTAATC
707 CTGCAAAAGAAAATCATCAATATTATTTATCCTAA-TGAGGAGAATATGTTTATAGTGCCTAATC
* * **
293395 ACAAAGA-GAATAAAGATCATTACTAGAATCCATGTTTGTCACAACTGAGAAACGAACTTAGGCT
771 ACAAA-ATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCT
* * *
293459 TTACAAAAATTTGT-GAGAAGAAAGCC-TTCTTTATGAAACCAATGCTTCGATATCGTGTATCCT
835 TTACAAAAATTGGTGGA-AAGAAAGCCTTTC-TTACGAAACCAATGCTTCAATATCGTGTATCCT
* * * * *
293522 TATTAGAAGACTAAGTGTATGGAGCCTAATCGTAAAAAGAATGGGCAT
898 TATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
* * * *
293570 TAGTATGACTATTCCT-ATTGTTTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGCTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * *
293634 GGAATTG-TTTTCTTGTGACACC-AAAGCGTCAATGTCATTTATCCTAATGAAAGGAA--TGTTT
66 AGAAATGCTTTTCTTGCGAC-CCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTT
* * * * * * *
293695 ATGGTTCCCATTCATGAAAGGAATGGAAACTATTATGAGAATTAATGCTTGCCTTATTTAAGGGA
130 TTGGTT-CCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGA
** * * * * *
293760 TGAACTTT-ATTTTTTAGTGAAATTA-GGCAAAGAAAAGATTTTCC-TACAAAGGAAGATCATTA
194 TG-ACTTTGA--TTTTAAAGAAAATAGGGCAAAGAAAAGA-TTTCCATGCAAAAGAAAATCATCA
* * * *
293822 ATATCATTTATCCTAATAAGGAGAATGTGTTTAGAATGCCTAATCACAAAATGAATAAAGATCAT
255 ATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCAT
* * * ** *
293887 TACTAGAATCTATGTTTGTCAAAATTGAGGC-TCGAACTTGGGCTAAACAAAAATTGGTGGAAAG
320 TACTAGAATCCATGTTTGTCACAATTGAGGCAT-GAACTTAGGCTTTACAAAAATTGGTGGGAAG
* * * * * *
293951 AAAGCCTTTCTTGCAAAACCAATGTTTCATTATCATGTATCCTTATTAGAAAACTAAGTTTATGG
384 AAAGCCTTTCTTACGAAACCAAAGCTTCAATATCATGTATCCTTATTAGAAGACTAAGTTTATGG
*
294016 TGCCTAATCCTGAAAAA-AATGGGGATTAGTATGATTATTCATGTTTATCTTATTTAAGAGACAA
449 TGCCTAATCCT-AAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACAA
* * * *
294080 ACTTTGATTCTATCAAAAATGGTTTAAAGAAATGCTTTTCTTACAACCCTAAAGCGTCAATGTCA
513 ACTTTGATTCTATCAAAAATGGTTGAAAGAAATGCTTTTCTTGCGACCC-AAAGCATCAATGTCA
* * * * * *
294145 TGTATCCTAATGAAAGAAATGTGTTTCTGGTTCATAATCATAAAAAGAATGGAGACTATTACGAG
577 TGTATCCTAATGAAAGGAA-GTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTGTTATGAG
* * *
294210 AATCAATGCTTGGCTTATTTAAGGGATGACTTTTATTTTAAGGAAATTAGGGCAAA-AAGAACAT
641 AATCAATGCTTGCCTTATTTAAGGGATGACTTTGATTTTAAGGAAA-TAGGGCAAAGAA-AAGAT
* * *
294274 TTCCATGCAAAAGAAAGTCATTAATATTATTTATCCTAATAAGGAGAATATGTTTATAGTGCCTA
704 TTCC-TGCAAAAGAAAATCATCAATATTATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTA
* * * * *
294339 ATCACAAAATGAATGAGGATCATTACAAGAATCCGTGTTTGTCACAAATGAGGCACGAACTTAGA
768 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGG
* * ** ** *
294404 CTTTACAAAAATTGGTGAGAAA-AAAGCATTTCCTACGAAACCAAAACAACAATATCGTGTATCA
833 CTTTACAAAAATTGGTG-GAAAGAAAGCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCC
* *
294468 TTATGAGAAGACTATA-TTTATGGTGCCTAATCCTGAAAAGAATGGTGAT
897 TTATTAGAAGACTA-AGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
** * * *
294517 TAGTATGTTTTTTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATCCAAAATGGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * *
294582 ACAAATGCTTTTCTTGCAACCCTAAAGCATCAATGTCAAGTATCCTAAGGAAAGGAATGTGTTTT
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
* * ** *
294647 TGGTTCCCAATCACGAAAAGAATGGAGACTATTTTGAGAATCAATGCTTGCCTTATTTATGGGAT
131 TGGTT-CCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGAT
* * *
294712 AAACTTTGATTTT-AAGTAAAACA-GGCAAAGAAAAG------AT--AAAAGTAAATCATCAATA
195 -GACTTTGATTTTAAAG-AAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATA
*
294767 TCATTTATGCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
258 TCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
* * *
294832 TAGAATCCATGTTTGTCATAACTGAGGCATGAACTTAGGTTTTACAAAAATTGGTGGGAAGAAAG
323 TAGAATCCATGTTTGTCACAATTGAGGCATGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAG
* * * * * * *
294897 CTTTTCTTACGAAACCAAAGCTTCAATATCTTGTATCCTTATTAGAAGGCTATGTTTAGGGCGTC
388 CCTTTCTTACGAAACCAAAGCTTCAATATCATGTATCCTTATTAGAAGACTAAGTTTATGGTGCC
* * * * * *
294962 TAATCCTGAAAATAATAGGGATTAGTATGATTATTCATATTTGTCTTATTTAAGAGACAAACTTT
453 TAATCCTAAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACAAACTTT
* * * * * * * *
295027 GCTTCTATAAAAAATAGTTGAAAGAAATACTTTTTTTACGACCCCAAAGCATCAGTATCATGTAT
518 GATTCTATCAAAAATGGTTGAAAGAAATGCTTTTCTTGCGA-CCCAAAGCATCAATGTCATGTAT
* * * * * *
295092 CTTAGTGAAAGTAATGTGTTTTTGGTTCCTAATCTTGAAAAGAATGGAGATTGTTTTGAGAATCA
582 CCTAATGAAAGGAA-GTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTGTTATGAGAATCA
* * * *
295157 ATGCTTGCCTTATTCAAAGGATGAACTTTGATTTTAAGTAAACTAGGGCAAAGAAAAGATTTACA
646 ATGCTTGCCTTATTTAAGGGATG-ACTTTGATTTTAAGGAAA-TAGGGCAAAGAAAAGATTT-CC
* * *
295222 TGCAAAAGTAAATCATCAATATCATTTATCCTAACT-AGGAGAATGTGTTTATAGTGCCTAATCA
708 TGCAAAAGAAAATCATCAATATTATTTATCCTAA-TGAGGAGAATATGTTTATAGTGCCTAATCA
* * * * * * *
295286 TAAAATGAATAAAGATCATTACTAGAATCTATGTTTGTCACAATTAAGGCTCGAACTTGGGCTAT
772 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTT
* * *
295351 ACAAAAATTGGTGGAAAGAAAGCCTTTTTTACGAAACCAATGCTTCTATATTGTGTATCCTTATT
837 ACAAAAATTGGTGGAAAGAAAGCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATT
* * *
295416 AGAAAACTGTA-TTTATGGTGCCTAATCCTGTAAAGAATGGGGAT
902 AGAAGACT-AAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
* * * * *
295460 TAGAATAATTATTCATGTTTGTCTTTTTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * * *
295525 AGAAATCCTTTTCTTGCGACCCTAGAGGGACAATGTCACT-TATCCTAATGAATGGAATGCGTTT
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCA-TGTATCCTAATGAAAGGAATGTGTTT
* * * *
295589 TTGGTTTCCAATCACGAAAAGAATGGAGACTGTTATGAGAATCAATGGTTCCCTTATTTAA---A
130 TTGG-TTCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGA
* * * * ** *
295651 -G--GTTGATTTTAAGGAAAATAGGGCGAAG-AAAGATTTACATGCAAAA-AATTTTATCAATAT
194 TGACTTTGATTTTAAAGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATAT
295711 CATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACT
259 CATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACT
* * *
295776 AGAATCCATGTTTGTCATAATTAAGGCATGAACTTAGACTTTACAAAAATT-GTGGGAAGAAAGC
324 AGAATCCATGTTTGTCACAATTGAGGCATGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGC
* * *
295840 CTTTCTTACGAAACCAAAGCATCAA-ATTATGTATCCTTATGAGAAGACTAAGTTTATGGTGCCT
389 CTTTCTTACGAAACCAAAGCTTCAATATCATGTATCCTTATTAGAAGACTAAGTTTATGGTGCCT
* * * *
295904 AATCCTAAAAAGATTAGGGATTAGTATGACTATTCATGTTTATTTTATTTAAGAGACAAACTTTA
454 AATCCTAAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACAAACTTTG
* *
295969 ATTCTATAAAAAACT-GTTGAAAGAAATGCTTTTCTTGCGGCACCAAAGCATCAATGTCATGTAT
519 ATTCTATCAAAAA-TGGTTGAAAGAAATGCTTTTCTTGCGAC-CCAAAGCATCAATGTCATGTAT
* * * * * * *
296033 CATGATGAAAGGATTGCGTTTTTGGTTCCTAATTATGAAAAAAATGGAGGCTGTTATGAGAATCA
582 CCTAATGAAAGGA-AGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTGTTATGAGAATCA
* *
296098 ATG---GTCTTATTTAAGGGATGAAATTT-ATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCA
646 ATGCTTGCCTTATTTAAGGGATG-ACTTTGATTTTAAGG-AAATAGGGCAAAGAAAAGATTTCC-
** * ** ** * * *
296159 TGGTAGAGAAAATCATCAATATTATTTATATTTTTGTGGAGAATAAGTTTATAGTGCCTAATTAC
708 TGCAAAAGAAAATCATCAATATTATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCAC
* *
296224 AAAGA-GAATGAAGATCATTACTAGAATCCATGTTTGTCACAACTGAGGCACGAACTTAGGCATT
773 AAA-ATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTT
* * *
296288 ACAAAAATTGGTGGGAAGAAAGCCTTCCATACGAAACCAATGCTTCAATATCGTGTATCCTTATT
837 ACAAAAATTGGTGGAAAGAAAGCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATT
* * *
296353 AGAAGACTAAGTGTGTGGAGCCTAATCCTGAAAAGAATGGGGAT
902 AGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
**
296397 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAAAAGTTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * * * * *
296462 GGAAATG-TTTTCTTGTGGCAGC-GAAGTGTCATTGTCATGTATCCTAATGAAATGAATGTGTTT
66 AGAAATGCTTTTCTTGCGAC-CCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTT
* * ** *
296525 TTGGTTCCTAATCATGAAAA-AATGGAGACTGTTACTATAATCAATGCTTATCATATTTAAGGGA
130 TTGGTTCC-AATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGA
* * * *
296589 TAAACTTT-ATTTTTAAGTGAAATAGGGCAAAGAAAAGATTTTCAT--ATAAAGAAAAATCATCA
194 T-GACTTTGATTTTAAAG-AAAATAGGGCAAAGAAAAGATTTCCATGCA-AAAG-AAAATCATCA
* * * * * *
296651 GTATCATTTATCTTGATAAGGAGAATGTGTTTATAGTGCCTAATTATAAAATGAATGAAGATCAT
255 ATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCAT
* * * * ** *
296716 TACTAGAATCTATGTTTTTCACAATTAAGGC-TCGAACTTGGGCTAAACAAAAATTGGTGGAAAG
320 TACTAGAATCCATGTTTGTCACAATTGAGGCAT-GAACTTAGGCTTTACAAAAATTGGTGGGAAG
* * * * *
296780 AAAGCATTTCTTATGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGA
384 AAAGCCTTTCTTACGAAACCAAAGCTTCAATATCATGTATCCTTATTAGAAGACTAAGTTTATGG
* * * *
296845 TGCCTAATCCTGAAAGGAATGGGGATTAGTATGATTATT-AGCGTTTATCTTATTTAAGAGACAA
449 TGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCA-TGTTTATCTTATTTAAGAGACAA
296909 ACTTTGATTCTATCAAAAATGGTTGAAAGAAATGCTTTTCTTGCGACCCTAAAGCATCAATGTCA
513 ACTTTGATTCTATCAAAAATGGTTGAAAGAAATGCTTTTCTTGCGACCC-AAAGCATCAATGTCA
* * * * *
296974 TGTATCTTAATGAAAGGAATGTGTTTTTGGTTCATAATCATAAAAATAATGGAGACTGTTATGAA
577 TGTATCCTAATGAAAGGAA-GTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTGTTATGAG
* * * *
297039 AATCAATGAC-TGCCTTATTTAATGGATGACTTTGATTTTAAGGAAAATAGGGTAAAGAGAATAT
641 AATCAATG-CTTGCCTTATTTAAGGGATGACTTTGATTTTAAGG-AAATAGGGCAAAGAAAAGAT
* *
297103 TTCCGTGC-AAA-AAAAT-ATTCAATCTTATTTATCCTAATGAGGAGAATATGTTTATAGTGCGT
704 TTCC-TGCAAAAGAAAATCA-TCAATATTATTTATCCTAATGAGGAGAATATGTTTATAGTGCCT
* * *
297165 AATCACAAAATGAATGAAGATCACTACTAGAATCCATGTTTGTCACAATTCAGGCACTAACTTAG
767 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAG
* * * * *
297230 GCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTTC-AAACTACA-GCATCATTATCGTGTATC
832 GCTTTACAAAAATTGGTGGAAAGAAAGCCTTTCTTACGAAACCA-ATGCTTCAATATCGTGTATC
* * * * * *
297293 GTTATGAGAAGACTATGTTAATGGTGCCTAATCTTGAAAAGAATAGGGAT
896 CTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
* * * * *
297343 TAGTATGGCTATTTATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAGAAACGATTGAA
1 TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
* * * * * *
297408 AGAAATGCTTTTCTTGTGGCACTAAAGCGACAATGTCACGTATCCTTATGAAAGGAATGTGTTTT
66 AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
* * * *
297473 T--TTCCTTAATC-TGGAAAATAATAGAGACTGTTACAAGAATCAATGCTTGCCTTATTTAATGG
131 TGGTTCC--AATCAT-GAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGG
* * * *
297535 ATGATTTTTGATTTTAAAGAAAATAGGGCAAATAGAAGATTTCCATGCAAAAAAAAATCATCAAT
193 ATGA-CTTTGATTTTAAAGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAAT
* * * * **
297600 ATTATTTATCCTAATGAGGAGAATATGTTTATTGTGCCTAATTACAATGTGAATGAAGATCATTA
257 ATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTA
* * ** * * * * *
297665 CAAGAATCCATGTTTGTCACAAATGAGGCCCGAACTGAGACTTTATAAAAATTAGTTGGAAGAAA
322 CTAGAATCCATGTTTGTCACAATTGAGGCATGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAA
* * * * *
297730 GCCTTTCTTAAGAAACCAAAGCATCAATATCATGTAAT-GTTATGAGAAGACTATGTTTATGGTG
387 GCCTTTCTTACGAAACCAAAGCTTCAATATCATGT-ATCCTTATTAGAAGACTAAGTTTATGGTG
* * * * *
297794 CTTATTCCTGAAAAGAATGGGGA-TATGTATGACTATTTATGTTTGTCTT
451 CCTAATCCTAAAAAGAATGGGGATTA-GTATGACTATTCATGTTTATCTT
297843 CCTGCAACCT
Statistics
Matches: 5254, Mismatches: 777, Indels: 278
0.83 0.12 0.04
Matches are distributed among these distances:
935 38 0.01
936 75 0.01
937 298 0.06
938 24 0.00
940 2 0.00
941 208 0.04
942 422 0.08
943 528 0.10
944 126 0.02
945 170 0.03
946 675 0.13
947 1595 0.30
948 641 0.12
949 360 0.07
950 23 0.00
951 68 0.01
952 1 0.00
ACGTcount: A:0.36, C:0.13, G:0.18, T:0.32
Consensus pattern (945 bp):
TAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAA
AGAAATGCTTTTCTTGCGACCCTAAAGCGTCAATGTCATGTATCCTAATGAAAGGAATGTGTTTT
TGGTTCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAAGGGATG
ACTTTGATTTTAAAGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCA
TTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAG
AATCCATGTTTGTCACAATTGAGGCATGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCT
TTCTTACGAAACCAAAGCTTCAATATCATGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAA
TCCTAAAAAGAATGGGGATTAGTATGACTATTCATGTTTATCTTATTTAAGAGACAAACTTTGAT
TCTATCAAAAATGGTTGAAAGAAATGCTTTTCTTGCGACCCAAAGCATCAATGTCATGTATCCTA
ATGAAAGGAAGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGCT
TGCCTTATTTAAGGGATGACTTTGATTTTAAGGAAATAGGGCAAAGAAAAGATTTCCTGCAAAAG
AAAATCATCAATATTATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAA
TGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACTTAGGCTTTACAAAAATT
GGTGGAAAGAAAGCCTTTCTTACGAAACCAATGCTTCAATATCGTGTATCCTTATTAGAAGACTA
AGTTTATGGTGCCTAATCCTGAAAAGAATGGGGAT
Found at i:298974 original size:476 final size:477
Alignment explanation
Indices: 297866--310544 Score: 6454
Period size: 476 Copynumber: 26.4 Consensus size: 477
297856 AGCCTTAATA
* * * * * *
297866 TCATGCATCCTAAGGAAAGGAATTTG-TTCTTGGATCCTAATCATGAAAAGAATGGAGACTATTA
1 TCATGTATCCTAATGAAAGGAATGTGTTTC-TGGTTCCCAATCATGAAAAGAATGGAGACTGTTA
* ** * * * *
297930 CGAGAATCAATGCTTGCCTTATTTAAAGCCTGAATTTTAATTTTAAGGAAAATAAGGCAAAGGAA
65 CGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAA
* * *
297995 AGATTTTACATGCAAAAGAAAATCATTAATATCATTTATCCTAATGAGGAGAATTTTTTTATAGT
130 AGATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
*
298060 GCCTAATTC-CAAAATGAATGAAGATCATTACTAAAATCCATGTTTGTCACAATTGAGGCACGAA
195 GCCTAA-TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAA
* * * * *
298124 CTTAGGCTTTACAAATATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAATGCTTCAATATAGTG
259 CTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTG
* * * ** * *
298189 TATCCTTATTAGAAGACTAAGTTTCTGGTGCCTAATCCT-AAAAGGAATGACGATTAATATAATT
324 CATCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAA-GAATGGGGATTAGTATGATT
* *
298253 ATT-AGTGTTTGTCTTAGTTAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAAAGAAATGCT
388 ATTCA-TGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCT
* *
298317 TTTCTTGCAACCCTAAAGCGTCAATG
452 TTTCTTGCGACCCCAAAGCGTCAATG
* *
298343 TCATGTATCCTAATGAAAGAAATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* * * *
298408 GAGAATCAATGCTTACCTTATTTAAGGGATGAATTTTGATTTTAAGGAAAATATGGCAAGGAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* * *
298473 GATTTTACATGCAAAAGAAAATCATCAATATTATTTATCCTAATGAGGAGAATTTTTTTATAGTG
131 GATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG
* * * * *
298538 CCAAACCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTGACAATTGAGGCATGAGCT
196 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACT
* *
298603 TAGGCTTTACAAAAATTGGTGGGAAAAAAGCCTTTCTTAGGAAATCAAAGCATCAATATCGTGCA
261 TAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTGCA
* * * *
298668 TCCTTTTTAGAAGACAAACTTTATGGTGCCTAATCTTGAAAAGAATGGGGATTAGCATGATTATT
326 TCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTATT
*
298733 CGTGTTT-TCTTATTTAAGAGACAAACTTTGATTCTAT-AAATAACGGTTGAAAGAAATGCTTTT
391 CATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA-AACGGTTGAAAGAAATGCTTTT
* *
298796 CTTGTGACCCCAAAGCATCAATG
455 CTTGCGACCCCAAAGCGTCAATG
* * * * * * * * *
298819 TCATGCA-CCTTAATAAAAAGAATGTGTTTTTGGATCCCAATCATGGAAGGAATGTAGACTTTTA
1 TCATGTATCC-TAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTA
* * ** * * * * *
298883 CGAGAATTAACGCTAACCTTATTTAAAGAAGGAATTTTGATTTTATGGAAAATAGGGCAAAGAAA
65 CGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAA
* * *
298948 AGATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATTAGGAGAATTTGTATATAGT
130 AGATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
* * *
299013 GCCTAATTACAAAATGAATAAAGATCATTACAAGAATCCATGTTTGTCACAATTTGACGGCACGA
195 GCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAA-TTGA-GGCACGA
** * * ** * * *
299078 ACTTAGGCTACAAAAAAATTGGTGGGAAGAAAACCTTTCTTACAAAACCAAAGCTTCAGTATCAT
258 ACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGT
* * *
299143 GTAT-CTTTATTAGAAGACTAATTTTATGGCGCCTAATCCTGAAAAGAATGGGGATTAGTATGAT
323 GCATCCTTT-TTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAT
*
299207 TATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGATGAAAGAAATG-T
387 TATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCT
* *
299271 TTTCCTTGCGACCCCAAAGCATCATTG
452 TTT-CTTGCGACCCCAAAGCGTCAATG
* * *
299298 TCATGTATCCTAATGAAAGGAATATGTTTCTGGTTTCCAATCAAGAAAAGAATGGAGACTGTTAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* * * * * *
299363 GAGAATCAAAGCTTACCTTATTTAAAGGATGAACTTTGATTTTAAGTAAAAGAGGGCAAAGAGAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* * * * *
299428 GA-TTTACATGCAAAAGGAAATTATCAATATCATTTATCCTAACGAAGAGAATGTGTTCATAGTG
131 GATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG
* *
299492 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTGGTCACAATTGAGGCATGAACT
196 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACT
299557 TAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTGCA
261 TAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTGCA
*** * * * *
299622 TCCACATTAGAAAATTAAGTTTATGGTGCCTAATCGTGAAAAGAATGGGGATTAGTATGACTATT
326 TCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTATT
* * * * * *
299687 CATATTTGTGTTATTTAAGAGACAAACTTTGATTCCATTAAAAATGGTTGAAACAAATGCTTTTC
391 CATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTTC
* * *
299752 TTGCGACTCTAAAGCATCAATG
456 TTGCGACCCCAAAGCGTCAATG
* * * * * *
299774 TCATCTACCCTAATGAAAGGAATGTGTTTCTAGTTCCCAAACATGAAAAAAATGGAGACAGTTAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* * *
299839 AAGAATCAATGCTTGCCTTATTTAAGGGATTAACTTTGATTTGAAGGAAAATAGGGCAAAGAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* * * * * *
299904 GATTTT-CACGCAAAAGAAAATCATCAATATCGTTTATCGTAATTAGGAGAATTTTTTTATAGTG
131 GATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG
* * *
299968 CGTAATCACAAAATGAATGAAGATCATTACCAGAATCCATGTTTGTCACAATTAAGGCACGAACT
196 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACT
* * * *
300033 CAGGATTTTCAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAACATCGTGCA
261 TAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTGCA
* * * * * *
300098 TCCATATTAGAAGACTAAGTTTATGGTGCCTATTCGTGAAAAGAATGGGGATTAGTGTGACTATT
326 TCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTATT
* *
300163 CATGTTTGTCTTTTTTAAGAGACAAACTTTGATTCTATCAAAAAGGGTTGAAAGAAATGCTTTTC
391 CATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTTC
* *
300228 TTGCAACACCAAAGCGTCAATG
456 TTGCGACCCCAAAGCGTCAATG
* * * * *
300250 ACATGTATCCTAATGAAAGGAATATGTTTCTGGTTCCTAGTCATGAAAAGAATGGAGACTATTAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* *
300315 GAGAATCAATACTTGCCTTATTTAAGGGATGAACTTTGATCTTAAGGAAAATAGGGCAAAGAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* *
300380 GA-TTTACATGTAAAAGAAAATCATCAATATCATTTATCCTAATGAGAAGAATGTGTTTATAGTG
131 GATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG
* * * *** *
300444 CCTAATAACAAAATGAATGAAGATCATTACTAGAATCCAAGTTTGTCAGCCTAA-TCACAAAATG
196 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCA--C-AATTGA-GGCACG
* ** * *** * * * * *
300508 AA-TGAAGATTATTACTAGAATCCAAGTTCGTCACAATCAAGGCATGAACTTAGACTTTGCAAAA
257 AACT-TAGGCT-TTAC-A-AA---AA-TTGGTGGGAA-GAA---A-G-CCTT--TCTTAG--GAA
** * ** * * * * ***** * * * * * *
300572 ATTGGTCGGAAGAAAGAATTTCTTATGAAACCAAAGCATCAATATCGTGTATTCTTATGAGAAGA
304 A-----CCAAAGCATCAATATC--GTGCATCCTTTTTA-GAAGA-C-T-AAGT-TTATG-G-TGC
** ** ** * ** * *
300637 CTAAGTTTATGGTGCCTAATCATGGAAAGAATGGGGTATAACTATTCATGTTTGTCTTATTTAAG
355 CT-A----ATCCTG-AAAAGAATGG---GGAT-TAGTATGATTATTCATGTTTGTCTTATTTAAG
* * * * *
300702 AGACAAACTTTGATTCTACCGAAAACGGTTGAAACAAATGCTTTTCTTACGACACCAAAGCGTCA
410 AGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTTCTTGCGACCCCAAAGCGTCA
300767 ATG
475 ATG
* * ** *** * *
300770 TCATCTACCCTAATGAAAAAAATGTGTTTCTGGTTTTGAATCATGAAAAGAAT-AATGATTGTTA
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGA-GACTGTTA
** * * *
300834 CGAGAATCTTTGCTTTCCTTATTTAAGGGATGAACTTTGATTTTAAGAAAAATAAGGCAAAGAAA
65 CGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAA
*
300899 AGATTTT-CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAAAGTGTTTATAGT
130 AGATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
** * * * * * *
300963 GCCTAATCACAATGTGAATGAAGACCATTACTAGATTCCAGGCTTGTCACAATAGAGGCGCGAAC
195 GCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAAC
* * * *
301028 TTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCGTCAATATCTTGT
260 TTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTGC
* * * * * *
301093 ATCGTTATGT-GAATACTAAGTTTATGGTGCCTAATCCTAAAAAGAACGGGGATTAGTATGACTA
325 ATCCTT-TTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTA
* *
301157 TTCATGTTTGTTTTATTTAAGAGATAAACTTTGATTCTATCAAAAA-GAGTTGAAAGAAATGCTT
389 TTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACG-GTTGAAAGAAATGCTT
* ** *
301221 TTCTTGTGAGGCCAAAGCGTTAATG
453 TTCTTGCGACCCCAAAGCGTCAATG
* * * *
301246 TCATGTATCCTAATG-AAGGAAATGTGTTTCTGGTTCCTAGTCATGAAAGGAATGGAGATTGTTA
1 TCATGTATCCTAATGAAAGG-AATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTA
* *
301310 TGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATCTTAAGGAAAATAGGGCAAAGAAA
65 CGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAA
* *
301375 AGA-TTTACATGCAAAAAAGAAATCGTCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAG
130 AGATTTTACATGCAAAAGA-AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAG
* * *** * **
301439 TGCCTAATTATAAAATGAATGAAGATCATTACTAGAATCC-TGAAAAGAAT-AGAGATT-A-TTA
194 TGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG-TTTG--TCACA-ATTGAGGCA
* ** * *** * *** *
301500 CGAAAATCTTTGCTTGCCTTATTTAAAGGTTGAACTTTGATTATAAGGAAA--ATAGAGTAAGGA
255 CG--AA-CTTAG---G-CTT-TACAAA-----AA--TTGGTGGGAA-GAAAGCCT-TTCTTAGGA
** ** * * * * * * *
301563 AAAGAATTTTAGGCAAAAGAAAATCAT-CAATATCATTAATCCTAACGAGGAGAATATGTTTATA
303 AACCAA----A-GC--ATCAATATCGTGC---ATCCTT--T--TTA-GA--AGACTAAGTTTATG
* ** * * * * ** ** * * *
301627 GTGCCTAATCAC--AAAGTGAATGAAGATCATTACTAGA--ATCCTTGTTCATCACGAATGAGGA
351 GTGCCTAATC-CTGAAA-AGAATGGGGATTAGTA-T-GATTATTCATGTTTGTC-TTATTTAAGA
* ** * * * * * ** * *
301688 -ACGAACTTACACTT-TA-CAAAAATTGGTTGGAAGAAA-GCCTTTCTTACAAAACTAAAGCATC
411 GACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAATGCTTTTCTTGCGACCCCAAAGCGTC
*
301749 AATA
474 AATG
* * * * ** * * * * * *
301753 TCGTGTATGCTTATGAGAA-GACTAAGTTTGTGGTGCCTAATTC-TGAAAAGAAGGGGGATTAGT
1 TCATGTATCCTAATGA-AAGGAATGTGTTTCTGGTTCCCAA-TCATGAAAAGAATGGAGACT-GT
* * * * * * * *** *
301816 GT--GACTATTC-ATGTTTGTCTTATTTAAGAGTTAAACTTTGATTTTATCAAAAATAGTTG-AA
63 -TACGA-GAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAG-GGCAA
* * * * * * ** * * * *
301877 CGAAATGCTTTT-CTTGGGACACCAAAGTTA-CAATATCATGTATCCTAATGA-AAGGAATGTGT
125 AGAAAAGATTTTACAT-GCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGA-GAATGTGT
* * * * * * * * * * * ** *
301939 TTCTAATTTCC-AATCA-ATGAAAAGAATGGAGA-CTATCACAAGAGTCAATGCTTGCCTTATTT
188 TTAT-AGTGCCTAATCACA--AAATGAATGAAGATC-ATTACTAGAATCCATGTTTGTCACAATT
* ** * * * ** * *
302001 AAGAG-ATAAACTT-TGATTCTATCGAAAAGACT--T-AAAAGAAATGCTTTTCTT-GAGACACC
249 GAG-GCACGAACTTAGGCTT-TA-C-AAAA-ATTGGTGGGAAGAAA-GCCTTTCTTAG-GAAACC
* * * ** * * ** * * *
302060 AAAGCATCAATGTCATGTATCC-TAGTAAAAGTAATGTGTTTATGGTTCCTAGTCATGAAAAGAA
307 AAAGCATCAATATCGTGCATCCTTTTTAGAAG-ACTAAGTTTATGGTGCCTAATCCTGAAAAGAA
* * * * * * * * * * ** *
302124 TAGAGACT-GTTATGA-GAATCAATGCTTGCCGTATTTATGGGATGAACTTTGA-TCT-TAAGGA
371 TGGGGATTAG-TATGATTATTC-ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCA--A
* * *** * * * **** * *
302185 AAATAGG--GCAGAGAAAAAATTTACATG-AAAAAGAAAGTCATCAATA
432 AAA-CGGTTG-AAAGAAATGCTTTTCTTGCGACCCCAAAG-CGTCAATG
* * * * * * * * * *
302231 TCATTTATCCTATTG-AGGAGAATGTGTTTATAGTGCCTAATCA-CAAAATGAATGAAGA-TCAT
1 TCATGTATCCTAATGAAAG-GAATGTGTTTCTGGTTCCCAATCATGAAAA-GAATGGAGACT-GT
* * ** * *** ** * ** *
302293 TACTAGAATCCAA-G-TTCGTCAAAATTAAGGCCCGAACTTACACTTTACA--AAAATTTGTCAA
63 TACGAGAAT-CAATGCTT-GCCTTATTTAAGGGATGAACTTTGATTTTA-AGGAAAATAGGGCAA
** * *** ** * * * * * * * **
302354 A-AGAAAGCCTTT-CTTATTAAACCAAAGCATCAATATCGTGTATCCTTATTAGAAGACTAAGTT
125 AGA-AAAGATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTT
* * * * ** ** *
302417 TATGGTGCCTAAAC-CTGAAAA-GAATG--GA-CATTAGTATGACTATTCATACTTGTCTTATTT
189 TATAGTGCCTAATCAC--AAAATGAATGAAGATCATTACTA-GA--ATCCATGTTTGTCACAATT
* * * *** *** * ** * *
302477 AAGAGGCA--AACTT-TG-ATTAGTAAGCCTT--TCTTATA-AATGTTTTTCCT-GAGACACCAA
249 --GAGGCACGAACTTAGGCTTTA-CAAAAATTGGTGGGA-AGAAAGCCTTTCTTAG-GAAACCAA
* * * * ** * * * *
302534 AGCATCAATGTCATGTATCGTAATGA-AAGGA-AAATGTTTCTGGTTG--TAATCATGAAAAGAA
309 AGCATCAATATCGTGCATCCTTTTTAGAA-GACTAA-GTTTATGG-TGCCTAATCCTGAAAAGAA
* * * * * * * ** * * **
302595 TAGAGACT-GTTATGA-GAATCAATGTTTGCCTTATTTAAGGGATGAACTTCT-CTTTTAAGGAA
371 TGGGGATTAG-TATGATTATTC-ATGTTTGTCTTATTTAAGAGACAAACTT-TGATTCT-ATCAA
* * * * * **** ***
302657 AATA-GG--GCAAAGAAAAGATTTACATGCAAAATAAAATTATCAATG
432 AA-ACGGTTG-AAAGAAATGCTTTTCTTGCGACCCCAAAGCGTCAATG
* * * * * * ** * * *
302702 TCATTTATCCTAAT--AAGGATAACGTGTTTATAGTGCCTAATC-CCAAAATGAATGAAGATTAT
1 TCATGTATCCTAATGAAAGG--AATGTGTTTCTGGTTCCCAATCATGAAAA-GAATGGAGACTGT
* * * * ** * * * * * * * *
302764 TCCTAGAATCCAA-GTTTGTCACAATTAAGGCACGAACTTAGGCTTTGCAA--AAATTAGTGG-G
63 TACGAGAAT-CAATGCTTGCCTTATTTAAGGGATGAACTT-TGATTT-TAAGGAAAATAG-GGCA
** * * * ** * ** * * * * **
302825 AAG-AAAGCCTTT-CTTAC-GAA-CCAATGCTTCAATATCAAGTATCCTTATTAGAAGACTAAGT
124 AAGAAAAGATTTTACATGCAAAAGAAAAT-CATCAATATCATTTATCCTAATGAGGAGAATGTGT
* * * * ** * **
302886 TTATGGTGCCTAATCTCGAAA-GAATG--GA-GATTAGCGT-GATTATTGATTTTTGTC-TTATT
188 TTATAGTGCCTAATCACAAAATGAATGAAGATCATTA-C-TAGA--ATCCATGTTTGTCACAATT
* * * * * * * * * * *
302945 TAGGAGACAAACTT-TGATTCTATCAAAAA-CGGTTGAAAGAAGTGCTTTTC-TCGCGACAA-CA
249 GAGG-CACGAACTTAGGCTT-TA-CAAAAATTGGTGGGAAGAA-AGCCTTTCTTAG-GA-AACCA
* * * ** ** * * * * * * * * * *
303006 AAGCAACATTATCATATATCCTAATGAAAAGAATATGATTCTGGTTCCCAATCATGAAAAGAATA
308 AAGCATCAATATCGTGCATCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATG
* * * * * * * * * * ** * *
303071 GAGACT-GTTACGA-GAATCAGTGCTTGCCATATTTACGGGATGAACTTTGATTTTAAT-GAAAA
373 GGGATTAG-TATGATTATTCA-TGTTTGTCTTATTTAAGAGACAAACTTTGATTCT-ATCAAAAA
* * * * *** * * * *
303133 CAGG--GCAAAGAAAAGATTTTCATGCAAAAGCAAATCATTAATA
435 C-GGTTG-AAAGAAATGCTTTTCTTGCGACCCCAAAGCGTCAATG
* * * * * * * *
303176 TCATTTATCCTAATG-AGGAGAATGTGTTTATAGTACCTAATCA-AAAAATGAATGAAGATCAT-
1 TCATGTATCCTAATGAAAG-GAATGTGTTTCTGGTTCCCAATCATGAAAA-GAATGGAGA-C-TG
* * * * * * * * * *
303238 TT-CTAGAATCCA--C--G-----TTTGAGGCATGGAGTTAGACTTTACAAG-AATTGGAGGG--
62 TTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTA-AGGAAAAT--AGGGCA
** * * ** * * * * * * * * **
303290 AAG-AAAGCCTTT-CCTACAAAA-CCAATGCTTCAATGTCGTGTATCCTTATTAGAAGACTAAGT
124 AAGAAAAGATTTTACATGCAAAAGAAAAT-CATCAATATCATTTATCCTAATGAGGAGAATGTGT
* * ** *** * * ** *
303352 TTATGGTGCCTAATC-CTAGAAA-GAGTGGGGATTGGTA-T-GACTATTCGTGTTTGTCTTATTT
188 TTATAGTGCCTAATCAC-A-AAATGAATGAAGATCATTACTAGA--ATCCATGTTTGTCACAATT
* * ** * * * * *
303413 AAGAG-AC-AAATTTTGATTCTATCAAAAA-TAGTGGAAAGAAAAGCTTTTCTT-GCAACACCAA
249 GAG-GCACGAACTTAGGCTT-TA-CAAAAATTGGTGGGAAG-AAAGCCTTTCTTAGGAA-ACCAA
* * ** * ** * * * *
303474 AGCATCAATGTCGTGTAT-CTTAAT-GAAAGGAATGTGTTTTTGGT-TCTCAATCATGAAAGGAA
309 AGCATCAATATCGTGCATCCTTTTTAG-AA-GACTAAGTTTATGGTGCCT-AATCCTGAAAAGAA
* * * * ** ** * * * * ** **
303536 TGGAGACTATTACGAGAATGAATGGTTGCCATATTTAAGGGATGAACTTTGATTCTAAGGAAAAT
371 TGGGGATTAGTATGATTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCT-ATCAAAA-
* * * * ** **** * * *
303601 A-GG--GCAAATAAAAGATTTTCATGAAAAAGAAAATCATCAATA
434 ACGGTTG-AAAGAAATGCTTTTCTTGCGACCCCAAAGCGTCAATG
* * * * * * *
303643 TCACT-TATCCCAATG--AGGAGAGTATGTTTATTGTGCCTAATCA-GAAAATGAATGAAGATCA
1 TCA-TGTATCCTAATGAAAGGA-A-TGTGTTTCTGGTTCCCAATCATGAAAA-GAATGGAGA-C-
* * * * ** ** * * * * *
303704 T-TT-CTAGAATCCATGTTTGTCACAAATGAGGCACGAA--TTGAGGCTTTACA--AAAATTGGT
60 TGTTACGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGA--TTTTA-AGGAAAATAGG-
** ** * * * * ** *
303763 G-AGAAGAAAACCTTTCTTAC--G-AAACCAAAGT-GTCAATTTC-TTATATCATTGTGAGAAGA
121 GCA-AAGAAAA-GATT-TTACATGCAAAAGAAAATCATCAATATCATT-TATCCTAATGAGGAGA
* ** * * * ** * * * *
303822 CTAAGTTTATGGTGCCTAATC-CTAAAAAGAACGGGGATTAGTA-T-GACTATTCATGTTTGTCT
182 ATGTGTTTATAGTGCCTAATCAC-AAAATGAATGAAGATCATTACTAGA--ATCCATGTTTGTCA
* * * * * * * * * *
303884 TATTTAAGAG-ACAAACTT-TGATTCTATCAAAAA--GAGTTGAAAGAAATACTTTTCTT-GTGA
244 CAATTGAG-GCACGAACTTAGGCTT-TA-CAAAAATTG-GTGGGAAGAAA-GCCTTTCTTAG-GA
* *** * * * ** * * * ** * * * *
303944 CACCAAAATGTCAATGTCATGTATCCTAATGAAAAGAATGTGTTTCTGGTTCCTAGTCATGAAAA
303 AACCAAAGCATCAATATCGTGCATCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAA
* * ** * * * * * ** * ***
304009 GAATGGAGACT-GTTATGAGAATTAATGCTTGCCTTATTTAGGGGATGAACATTGATAT-TAAGG
368 GAATGGGGATTAG-TATGATTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGAT-TCTATCA
** * * * * * **** * * **
304072 AAAATAG-TGCAAAGAAAAGATTTACATGCAAAAGAAAATCATCAAAA
431 AAAACGGTTG-AAAGAAATGCTTTTCTTGCGACCCCAAAGCGTCAATG
* * * * * * * * * *
304119 TCATTTATCCTAATG--AGGATAATGTGTCTATAGTGCCTAATCA-CAAATTGAATGAAGA-TCA
1 TCATGTATCCTAATGAAAGG--AATGTGTTTCTGGTTCCCAATCATGAAA-AGAATGGAGACT-G
* * *** * * * * **
304180 TTACTAGAATCCAAGTTCATTAGCCTAATCACAAAATGAACGAAAATCATTACTAGAATCCAAGT
62 TTACGAGAAT-CAA-TGC-TT-GCCT--T-ATTTAAGGGATG--AA-C-TT--T-GATTTTAAG-
* * * * *
304245 TCGTCACAATCAAGGC-ACGAACTTAGACTTTACAAAAATTGGTCGGAAGAAAGAATTTCTTATA
112 --G--AAAAT-AGGGCAAAGAA--AAGATTTTAC----A-T-G-C-----AAA------------
* * * * * * * * * *
304309 AGACCAAAGCATCAATATCGTGTATTCTTATGAGAAGACTGAGTTTATGGTGCCTAATCATGAAA
146 AGA--AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCA-CAAA
** * * * ** * * * *
304374 AT-AATGGGGATTAGTA-T-GACTATTCATGTTTGTCTTAATTAAGAG-ACAAACTT-TGATTCT
208 ATGAATGAAGATCATTACTAGA--ATCCATGTTTGTCACAATTGAG-GCACGAACTTAGGCTT-T
* * * * * * * * * * * * *
304434 ATCAAGAA-CGGTTGAAACAAATGCTTTTCTTACGACACCAAAGCACCAATGTCAT-CTACCCTA
269 A-CAAAAATTGGTGGGAAGAAA-GCCTTTCTTAGGAAACCAAAGCATCAATATCGTGC-ATCCTT
* * * ** * * * * * **** * * ** * *
304497 ATGA-AAGGAATGTGTTTTTGGTTCCAAATCATGTAAAGAATAAAAATTATTA-CAAAAATCTTT
331 TTTAGAA-GACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTATTC-AT
* * * ** * * * *
304560 GCTTGCCTTATTTAAGGGATGAACTTTGATTTTATGGAAAATA-GG--GCAAAGAAAAGATTTTC
394 GTTTGTCTTATTTAAGAGACAAACTTTGATTCTAT-CAAAA-ACGGTTG-AAAGAAATGCTTTTC
* * **** * * * *
304622 ATGCAAAAGAAAATCATTAATA
456 TTGCGACCCCAAAGCGTCAATG
** * * * * * * ** * *
304644 TTGTTTATCCTAATGACGAA--AATGTGTTTATAGTGCCTAATCA-CAATGTGAATGAAGA-TCA
1 TCATGTATCCTAATGA--AAGGAATGTGTTTCTGGTTCCCAATCATGAA-AAGAATGGAGACT-G
* * * * * * * ** * * * * * * * **
304705 CTGCTAGATTCCAGGCTTGTCACAATTGAGACG-TGAACTTAGACTTCACA--AAAATTGGTGGG
62 TTACGAGAATCAATGCTTGCCTTATTTAAG-GGATGAACTTTGATTTTA-AGGAAAATAGG-GCA
** * * ** * * * * * **
304767 AAG-AAAGCCTTT-CTTAGGAAACCAAAGA--ATCAATATC-TTGTATCGTTATGTGAAGACTAA
124 AAGAAAAGATTTTACAT-GCAAAAGAAA-ATCATCAATATCATT-TATCCTAATGAGGAGAATGT
* ** * * * * **
304827 GTTCT-TGGTGCCTAATCTTGA-AAAAAAAACGAGGATC-GTA-T-GACTATTCATGTTTGTCTT
186 GTT-TATAGTGCCTAATC---ACAAAATGAATGAAGATCATTACTAGA--ATCCATGTTTGTCAC
* * * * * * * * *
304887 ATTTAAGAG-ACAAACTT-TGATTCTATCAAAAA--GAGTTGAAAGAAATGCTTTTCTT-GCATA
245 AATTGAG-GCACGAACTTAGGCTT-TA-CAAAAATTG-GTGGGAAGAAA-GCCTTTCTTAGGA-A
* * * * * ** * * ** * * * *
304947 GCCAAAACATCAATGTCATGTATCCTAATGA-AAGGAATGTGTTTCTGGTTCCTAGTCTTGAAAA
304 ACCAAAGCATCAATATCGTGCATCCTTTTTAGAA-GACTAAGTTTATGGTGCCTAATCCTGAAAA
** * * * * ** **
305011 GAATGGACATT-GTTATGA-GAATCAATGTTTGCCTTATTTAAGGGATGAACTTTGA-TCTTAAG
368 GAATGGGGATTAG-TATGATTATTC-ATGTTTGTCTTATTTAAGAGACAAACTTTGATTC-TATC
* * * * * * * **** * * *
305073 AAAAATAGG--GCAAGGAAAAGATTTACATGCAAAAGAAAATCATCAATA
430 AAAAA-CGGTTG-AAAGAAATGCTTTTCTTGCGACCCCAAAGCGTCAATG
* * * * * *
305121 TCATTTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATATTGC
1 TCATGTATCCTAATGAAAG-GAATGTGTTTCTGGTTCCCAAT--C---ATGAA--AAGA-A-TG-
* * * * *
305185 TAGAATCATGAATAGAATAAAGATTATTATGAAAATGTTTGCTTGCCTTATTTAAGGAATGAACT
55 GAG-A-C-TG--T----T-ACGA-GA--AT--CAA----TGCTTGCCTTATTTAAGGGATGAACT
* * *
305250 TTGATTTTAAGGAAAATAGGGCAAGGAAAAGATTTT-CAGGCAAAACAAAATCATCAATATCATT
101 TTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTACATGCAAAAGAAAATCATCAATATCATT
* * * * *
305314 AATCCTAATGTA-GAGAATATGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCAATGCTAGA
166 TATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGA
* * * *
305378 ATCCATGTTTATCACGAA-TGAGGCATGAACTTAAGCTTTACAAAAATTGGTTGGAAGAAAGCCT
230 ATCCATGTTTGTCAC-AATTGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCT
** * * * * * * *
305442 TTCTTACAAAACCAAAGCATAAATATTGTGTA-CACTTATGAAAAGACTAAGTTTGTGGTGCCTA
294 TTCTTAGGAAACCAAAGCATCAATATCGTGCATC-CTTTTTAGAAGACTAAGTTTATGGTGCCTA
* * * ** * * *
305506 ATTCTGAAAAGAAGGGGGATTAGTGTGGCTATTCTTGTTTGTCTTATTTAAGAGTCAAACTTTCA
358 ATCCTGAAAAGAATGGGGATTAGTATGATTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGA
* ** * * * * * * * *
305571 TTTTATCAAAAATAGTTGAACGAAATGCTTTTCTTGTGGCACCAATGTGACAATA
423 TTCTATCAAAAACGGTTGAAAGAAATGCTTTTCTTGCGACCCCAAAGCGTCAATG
* * * * *
305626 TCATATATCCTAA-GAAAGGAATTTGTTTCTAGTTCCTAATCATGAAAAGAATGGAGACTGTCAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* * *
305690 AAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTGAAGGAAAATAGGGCAAAAAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* * *
305755 GATTTT-CATGC-AAA-AAAATCATCAATATCATTTATCCTAAAGAGGAGAATGTGTTCATACTG
131 GATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG
** * * * * ** *
305817 CCTAATCACAATGTGAATGAAGATGACTACTAGATTCCAGGTTTGTCACAATTGAGGTGCGAACA
196 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACT
* * * *
305882 TAGACTTTACAAAAATTGGTGGGAAGAAAGCTTTTCTTATGAAACCAAA--ATGCCAATATCTTG
261 TAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCAT--CAATATCGTG
* * * * * *
305945 TATCGTTATGAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAACGGGGATTAGTATGACTA
324 CATCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTA
* * *
306010 TTCATATTTATCTTATTTAAGAGACAAACTTTGATTTTATCAAAAA-GAGTTGAAAGAAATGCTT
389 TTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACG-GTTGAAAGAAATGCTT
* *
306074 TTCTTGTGACACCAAAGCGTCAATG
453 TTCTTGCGACCCCAAAGCGTCAATG
* * ** * *
306099 TCATGTATCCTAATAAAAGGAATATGTTTCTAATTCCTAGA-CATGAAAAGAATGGAGTCTGTTA
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCA-ATCATGAAAAGAATGGAGACTGTTA
** * * *
306163 TAAGAATCAATGCTTGCATTATTTAAGGGGATAAACTTTGATCTTAAGGAAAATAGGGCAAAGAA
65 CGAGAATCAATGCTTGCCTTATTTAA-GGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAA
* * *
306228 AATA-TTTACATGCAAAAGAAAATCATCAATATCATTTATCATAAAGAGGAGAATGTGTTTATAG
129 AAGATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAG
* * * *
306292 AGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAAGTTCGTCACAATTAAGGCACGAA
194 TGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAA
* ** * *
306357 CTTAGACTTTACAAAAATTGGTTAGAAGAAAGCCTTTCTTATGAAAGCAAAGCATCAATATCGTG
259 CTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTG
* * * * *
306422 TATCCTTATTAGAAGACTAAGTTTATGGTGCCTAAACCTGAAAAGAATGAGGATTAGTATGACTA
324 CATCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTA
* ** * * * * * *
306487 TTCATGTTTATCTTATTTAAGAGGTAAATTTTGATTGTATTAAAAACGATTTAAAGAAATGTTTT
389 TTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTT
* * *
306552 TCCTGAGACACCAAAGCGTCAATG
454 TCTTGCGACCCCAAAGCGTCAATG
* * * ***
306576 TCATGTATCATAATGAAAGGAAAGTGTTTTTGGTTGGTAATCATGAAAA-AATTGGAGACTGTTA
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAA-TGGAGACTGTTA
** *
306640 CGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTCAATTTTAAGGAAAATAGGGCAAATAAA
65 CGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAA
* * *
306705 AGA-TTTACATGCAAAAGAAAATCATCAACATCATTTATCCTAATAAGGAGAATGTGTTTGTAGT
130 AGATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
* * * * * *
306769 GCCTAATCACAAAATGAATGAAGATCATTACAAGAATCCAGGTTTG-AACCAATTAAGACACAAA
195 GCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCA-CAATTGAGGCACGAA
* * * * * ***
306833 CTTAGGCTTTACAAAAATTAGTGGGAAGAAAGCCTTTCTTACGAAACCAATGCTTTAATATCAAA
259 CTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTG
* * *
306898 TATCCTTATTAGAAGACTAAGTTTATGGTGCCTAAT-CTCGAAAAGAATGGAGG-TTAGCATGAT
324 CATCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCT-GAAAAGAATGG-GGATTAGTATGAT
* * * * * * * *
306961 TATTCATTTTTTTCTTATTTAAGAGAAAAACTTTGTTTCTATCAGAAATGGTTGAAAGAAGTGTT
387 TATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCT
** *
307026 TTTCTTGCGACAACAAAGCGTCAATA
452 TTTCTTGCGACCCCAAAGCGTCAATG
* *
307052 TCATGTATCCTAATGAAAGGAATATGTTTCTGGTTCCCAATCATGAAAAGAATAGAGACTGTTAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* * * * ** * *
307117 GAGAATCATTGTTTGCCTTATTTACGGGATGAACTTTGGTTTTAACAAAAACACGGCAAAGAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* * * * *
307182 GA-TTTCCATGCAAAAGCAAATCATTAATACCATTTATCCTAATGAGGAGAATGTGTTTATAGTA
131 GATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG
* * * *
307246 CCTAATCACAAAATGAATGAAGATCATTTCTAGAATCCAAG-TT-T----A---AGGCACGGAGT
196 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACT
* * ** * * * *
307302 TAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCCTACAAAACCAATGCTTCAATGTCGTGTA
261 TAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTGCA
* * * * **
307367 TCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCATGAAAAGAATAGGGCTTAGTATGGCTATT
326 TCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTATT
* * * * *
307432 CATGTTTATCTTATTTAAGAGACAAATTTTGATTCTATCAAAAATGGTGGAAAGAAAAGCTTTTC
391 CATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTTC
* * *
307497 TTGCAACACCAAAGCATCAATG
456 TTGCGACCCCAAAGCGTCAATG
* * * * *
307519 TCTTGTATCTTAATGAAAGGAATATGTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAT
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* * * *
307584 GAGAATGAATGGTTGCCCTATTTAAGGAATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* * * * *
307649 GA-TTTCCATGCAAAAGAAAATCATTAATATCATTTAACCTAATGAGGAGAATGTGTTTGTGGTG
131 GATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG
* * * * * *
307713 CCTATTCAGAAAATGAATGAAGAACATTAGTAGAATCCATGTTTGTGC-TAATTAAGGCACGAAC
196 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGT-CACAATTGAGGCACGAAC
* *
307777 TTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGG-AACCAAAGCATCAATATCTTG
260 TTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTA-GGAAACCAAAGCATCAATATCGTG
* * ** * * *
307841 TATTCTCATTAGAAGTCTAAGTTTATGGTGCCTAATCTTGATAAGAATGGGGATTAGTATGATTA
324 CATCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTA
* * * * * *
307906 TTCATGTTTGCCTTATTTAAGAGACAAATTTTGATTCAATCAAAAATGGTGGGAAGAAATGCTTT
389 TTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTT
* * *
307971 TCTTGCAACCCTAAAGTGTCAATG
454 TCTTGCGACCCCAAAGCGTCAATG
* * * * * *
307995 TCATGTATCGTAATGAAAGAAATGTGTTTCTAGTTCCTAGTCATGAAAAGAATGTAGACTGTTAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* * * *
308060 GAGAATCAATGCCTACCTTATTTAAGGGATGAACTTCGATTTTAAAGAAAATAGGGCAAAGAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* * * *
308125 GA-TTTACATGCAAAAGAAAATTATCAATGTCATTTATCCTAATGAGGAGAATATGTTTGTAGTG
131 GATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG
* * * * *
308189 CCTAACCACAAAGTGAATGAAGATCATTTCTAGAATCCAAGTTAGTCACAATTGAGGCACGAACT
196 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACT
* * *** * ** * * * *
308254 TAGACTTTACAAAAATTAGTATAAAGAAAGCCTTTCCTACAAAACCAATGCTTCAATATCGCGTA
261 TAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTGCA
* * *
308319 TCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCT-AAAACTAATGGGGATTAGTATGACTAT
326 TCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAA-GAATGGGGATTAGTATGATTAT
* * ***
308383 TCATGTTTGTCTTATTTAAGAGGCAAACTTTGATTCTATAAAAAATAATTGAAAGAAATGCTTTT
390 TCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTT
* *
308448 -TTGTGACACCAAAGCGTCAATG
455 CTTGCGACCCCAAAGCGTCAATG
* * * * *
308470 TCATGTATCCTATTGAATGGAATGTGTTTTTGGTTCTCAATCATGAATAGAATGGAGACTGTTAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* * * * *
308535 GAGAATCAATGCTTGCCTGATTTAAAGGATGAACTTTGATTTTAAGAAAAATAGGGAAAATAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* * * * * *
308600 GA-TTTCCAAGCAAAA-AGAAATCAAT-AATATCATTTATCTTAATGAAGAGAATGTTTTTATAA
131 GATTTTACATGCAAAAGA-AAATC-ATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAG
** ** * * *
308662 TGAGTAATCACAAAGCGAGTGAAGATCATTAGTAAAATCCATGTTTGTCACAATTGAGGCACGAA
194 TGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAA
** * * ** *
308727 CTTAGATTTTA-ACAAAATTTGAGGGAAGAAAGCCTTTCTTACAAAACCAAAGCTTCAATATCGT
259 CTTAGGCTTTACA-AAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGT
** * * * * * * *
308791 ATATCC-TTGTAGGAATACTAA-TTTATGGGGTCTATTCCTGAAAAGAATGGGTATTAGTATGAC
323 GCATCCTTTTTA-GAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAT
* * **
308854 TATTCATGTTTATCTTATTTAAGAGACAAACTTTGATTCTATAAAAAATAGTTGAAAGAAATGCT
387 TATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCT
* ** * *
308919 TTTCTTGAGATACCAATGTGTCAATG
452 TTTCTTGCGACCCCAAAGCGTCAATG
* * * *
308945 TCATGTATCCTAATGAAAGGAATGTGTTTTTGGTTCCTATTCATG-AAAGAATGGTGACTGTTAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* * * *
309009 TAGAATCAATGCTTG-CTTATTTAAGGGATGAACTTTAATTTTAAAGAAAATATGGCAAAGAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* * *
309073 GATTTCCTA-A--CAAAAGAAAATCA-CTAATATCATTTATCCTAATAAGAAGAATGTGTTCATA
131 GATTT--TACATGCAAAAGAAAATCATC-AATATCATTTATCCTAATGAGGAGAATGTGTTTATA
* * * * * *
309134 GTGCCTAATCAGAAAAGGAATGAAGATAATTTCTAGAATCCATGTTTG-CCCAGTTGAGGCACGA
193 GTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGA
* * * * * *
309198 TCTTAGACTTCACAGAAATTGGTGGGAAGAAAGCCTTTCTT-GCGAAGCCAAAGCATCAGTATCG
258 ACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAG-GAAACCAAAGCATCAATATCG
* * * *
309262 TGTAT-CTTTATGT-GAAGACTAAGTTTATGGTGCCTGATCCTGAAAAAAATAGGGATTAGTATG
322 TGCATCCTTT-T-TAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATG
* * * *
309325 ATTATTTATGTTTGTCTTATTTAAGAGATAAACTTTGATTCAATCAAAAATGGTTGAAAGAAATG
385 ATTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATG
* * *
309390 CTTTTCTTGTGACACCAAAGCATCAATG
450 CTTTTCTTGCGACCCCAAAGCGTCAATG
* * * * *
309418 TCATGTATCCTAATGAAAGGAACGTGTTTTTTGTGCCCAATCATGAAAAAAATGGAGACTGTTAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
*
309483 GAGAATCAATGCTTGCCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* *
309548 GA-TTTCCATGCAAAAGAAAATCAAT-AATATCATTTATCCTAATGAGGAGAATGTGTTTATAAT
131 GATTTTACATGCAAAAGAAAATC-ATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
** * * * * * *
309611 GAGTAATCACAAAGTGAATGAAGATCACTT-CTAAAATCGATGTTTGTCCCTATTGAGGCACAAA
195 GCCTAATCACAAAATGAATGAAGATCA-TTACTAGAATCCATGTTTGTCACAATTGAGGCACGAA
* * * *
309675 CTTAGACTTTACAAAAATTAGTGGGAAGAAAGCCTTTCTTAGGAAACAAAAGCATTAATATCGTG
259 CTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTG
* * * * * * * * * *
309740 TATACTTATAAGAAGGCTAAGTTTATGATGCCTAATTCTAAAAAGAATGGGGATTAGTATAACTA
324 CATCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTA
* ** * *
309805 TTCATATTTGTCTTATTTAAGAGATGAACTTTGATTCTATCAAAAACGGCTGAAAGAAATACTTT
389 TTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTT
* * *
309870 TCTTGTGACCCCAAAGCATCAATA
454 TCTTGCGACCCCAAAGCGTCAATG
* * * * * * * ** *
309894 TCATGTATCCTAAAGAAAAGAACGTGTTTTTAGTTCCCAATCAGGAAAAAAATAAAGACTCTTAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* * * * *
309959 GAGAATCAATGCTTGCCTTTTTTAAGAGTTGAACTTTGA-TTTAAAGAAAATGGGGCAAAGAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* * * * * * *
310023 TATTTT-CATGCAGAAGAAAATCATCAATATCACTTATCCCAATGAGGAGAGTATGTTTAAAGTG
131 GATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG
* * * * ** *
310087 CCTAATCAGAAAATGAATGAAGATCATTTCAAGAATCTATGTTTGTCACCGTTGAGGCTCGAACT
196 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACT
* * * * * *
310152 TAGGCTTTACAAAAATTGGTGGGAAG-AAGCCCTTTCTCATGAAACCAATGCTTCAGTATCGTGT
261 TAGGCTTTACAAAAATTGGTGGGAAGAAAG-CCTTTCTTAGGAAACCAAAGCATCAATATCGTGC
* * * * * * *
310216 ATCC-TATTAGAAGGCAAATTTTATGGTGCCTAATCCTGAAAATAATGGGGATTAGTATGACTCT
325 ATCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTAT
* * * * * * *
310280 TAATGTCTGTCTTATTTAGGAGGCAAACTTTAAGTCTATCAAAAATGGTTGAAAGAAATGCTTTT
390 TCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTT
* *
310345 CTTGCGACACCAAAGCGTCAACG
455 CTTGCGACCCCAAAGCGTCAATG
* * * * * * * *
310368 TCAAGTATCGTATTGAATGGAATGTGTTTTTAGTTCTCAATCATGAAAAGAATGGAGACTATTAC
1 TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
* * * * *
310433 GAGAATCAATGCTTCCCTTGTTTAAGTGATGAACTTTGATTTTAAGGAAATTAGGGCAAAAAAAA
66 GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
* *
310498 GA-TTTCCAAGC-AAAG-AAATCAAT-AATATCATTTATCCTAATGAGGAG
131 GATTTTACATGCAAAAGAAAATC-ATCAATATCATTTATCCTAATGAGGAG
310545 TGTCGTAACG
Statistics
Matches: 9849, Mismatches: 1825, Indels: 1060
0.77 0.14 0.08
Matches are distributed among these distances:
463 1 0.00
464 4 0.00
465 35 0.00
466 76 0.01
467 637 0.06
468 20 0.00
469 43 0.00
470 55 0.01
471 194 0.02
472 163 0.02
473 659 0.07
474 640 0.06
475 845 0.09
476 3139 0.32
477 1201 0.12
478 337 0.03
479 202 0.02
480 20 0.00
481 6 0.00
482 3 0.00
483 11 0.00
484 10 0.00
485 10 0.00
486 18 0.00
487 5 0.00
488 8 0.00
489 6 0.00
490 6 0.00
491 14 0.00
492 29 0.00
493 16 0.00
494 8 0.00
495 20 0.00
496 13 0.00
497 12 0.00
498 1 0.00
499 14 0.00
500 5 0.00
501 17 0.00
502 9 0.00
503 15 0.00
504 33 0.00
505 164 0.02
506 121 0.01
507 203 0.02
508 84 0.01
509 16 0.00
510 14 0.00
511 8 0.00
512 1 0.00
514 4 0.00
515 6 0.00
516 12 0.00
517 9 0.00
518 6 0.00
519 4 0.00
520 295 0.03
521 5 0.00
522 3 0.00
523 1 0.00
524 11 0.00
525 309 0.03
526 11 0.00
527 1 0.00
529 1 0.00
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.31
Consensus pattern (477 bp):
TCATGTATCCTAATGAAAGGAATGTGTTTCTGGTTCCCAATCATGAAAAGAATGGAGACTGTTAC
GAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAA
GATTTTACATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG
CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCACAATTGAGGCACGAACT
TAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTAGGAAACCAAAGCATCAATATCGTGCA
TCCTTTTTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGATTATT
CATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTTC
TTGCGACCCCAAAGCGTCAATG
Found at i:300504 original size:49 final size:49
Alignment explanation
Indices: 300443--300540 Score: 169
Period size: 49 Copynumber: 2.0 Consensus size: 49
300433 TGTTTATAGT
*
300443 GCCTAATAACAAAATGAATGAAGATCATTACTAGAATCCAAGTTTGTCA
1 GCCTAATAACAAAATGAATGAAGATCATTACTAGAATCCAAGTTCGTCA
* *
300492 GCCTAATCACAAAATGAATGAAGATTATTACTAGAATCCAAGTTCGTCA
1 GCCTAATAACAAAATGAATGAAGATCATTACTAGAATCCAAGTTCGTCA
300541 CAATCAAGGC
Statistics
Matches: 46, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
49 46 1.00
ACGTcount: A:0.42, C:0.17, G:0.14, T:0.27
Consensus pattern (49 bp):
GCCTAATAACAAAATGAATGAAGATCATTACTAGAATCCAAGTTCGTCA
Found at i:301649 original size:189 final size:190
Alignment explanation
Indices: 301320--301668 Score: 524
Period size: 189 Copynumber: 1.8 Consensus size: 190
301310 TGAGAATCAA
* * *
301320 TGCTTGCCTTATTTAAGGGATGAACTTTGATCTTAAGGAAAATAGGGCAAAGAAAAGATTTACAT
1 TGCTTGCCTTATTTAAAGGATGAACTTTGATCTTAAGGAAAATAGAGCAAAGAAAAGATTTACAG
* * * * * *
301385 GCAAAAAAGAAATCGTCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATTAT
66 GCAAAAAAGAAATCATCAATATCATTAATCCTAACGAGGAGAATATGTTTATAGTGCCTAATCAC
301450 AAAATGAATGAAGATCATTACTAGAATCCTGAAAAGAATAGAGATTATTACGAAAATCTT
131 AAAATGAATGAAGATCATTACTAGAATCCTGAAAAGAATAGAGATTATTACGAAAATCTT
* * * *
301510 TGCTTGCCTTATTTAAAGGTTGAACTTTGAT-TATAAGGAAAATAGAGTAAGGAAAAGAATTT-T
1 TGCTTGCCTTATTTAAAGGATGAACTTTGATCT-TAAGGAAAATAGAGCAAAGAAAAG-ATTTAC
*
301573 AGGCAAAAGA-AAATCATCAATATCATTAATCCTAACGAGGAGAATATGTTTATAGTGCCTAATC
64 AGGCAAAAAAGAAATCATCAATATCATTAATCCTAACGAGGAGAATATGTTTATAGTGCCTAATC
*
301637 ACAAAGTGAATGAAGATCATTACTAGAATCCT
129 ACAAAATGAATGAAGATCATTACTAGAATCCT
301669 TGTTCATCAC
Statistics
Matches: 142, Mismatches: 15, Indels: 5
0.88 0.09 0.03
Matches are distributed among these distances:
189 80 0.56
190 58 0.41
191 4 0.03
ACGTcount: A:0.41, C:0.11, G:0.18, T:0.30
Consensus pattern (190 bp):
TGCTTGCCTTATTTAAAGGATGAACTTTGATCTTAAGGAAAATAGAGCAAAGAAAAGATTTACAG
GCAAAAAAGAAATCATCAATATCATTAATCCTAACGAGGAGAATATGTTTATAGTGCCTAATCAC
AAAATGAATGAAGATCATTACTAGAATCCTGAAAAGAATAGAGATTATTACGAAAATCTT
Found at i:302013 original size:160 final size:159
Alignment explanation
Indices: 301834--302176 Score: 402
Period size: 160 Copynumber: 2.2 Consensus size: 159
301824 TCATGTTTGT
* * * * * * *
301834 CTTATTTAAGAGTTAAACTTTGATTTTATCAAAAATAGTTGAACGAAATGCTTTTCTTGGGACAC
1 CTTATTTAAGAGATAAACTTTGATTCTATCAAAAAGACTTAAAAGAAATGCTTTTCTTGAGACAC
* * * *
301899 CAAAG-TTACAATATCATGTATCCTAATGAAAGGAATGTGTTTCTAATTTCC-AATCAATGAAAA
66 CAAAGCAT-CAATATCATGTATCCTAATAAAAGGAATGTGTTTAT-AGTTCCTAATC-ATGAAAA
* *
301962 GAATGGAGACTATCACAAGAGTCAATGCTTGC
128 GAATAGAGACTATCACAAGAATCAATGCTTGC
*
301994 CTTATTTAAGAGATAAACTTTGATTCTATCGAAAAGACTTAAAAGAAATGCTTTTCTTGAGACAC
1 CTTATTTAAGAGATAAACTTTGATTCTATCAAAAAGACTTAAAAGAAATGCTTTTCTTGAGACAC
* * * * *
302059 CAAAGCATCAATGTCATGTATCCTAGTAAAAGTAATGTGTTTATGGTTCCTAGTCATGAAAAGAA
66 CAAAGCATCAATATCATGTATCCTAATAAAAGGAATGTGTTTATAGTTCCTAATCATGAAAAGAA
* * **
302124 TAGAGACTGTTATGAGAATCAATGCTTGC
131 TAGAGACTATCACAAGAATCAATGCTTGC
* * * *
302153 CGTATTTATGGGATGAACTTTGAT
1 CTTATTTAAGAGATAAACTTTGAT
302177 CTTAAGGAAA
Statistics
Matches: 154, Mismatches: 27, Indels: 5
0.83 0.15 0.03
Matches are distributed among these distances:
159 57 0.37
160 96 0.62
161 1 0.01
ACGTcount: A:0.36, C:0.14, G:0.17, T:0.33
Consensus pattern (159 bp):
CTTATTTAAGAGATAAACTTTGATTCTATCAAAAAGACTTAAAAGAAATGCTTTTCTTGAGACAC
CAAAGCATCAATATCATGTATCCTAATAAAAGGAATGTGTTTATAGTTCCTAATCATGAAAAGAA
TAGAGACTATCACAAGAATCAATGCTTGC
Found at i:302098 original size:666 final size:653
Alignment explanation
Indices: 300806--302743 Score: 1862
Period size: 666 Copynumber: 3.0 Consensus size: 653
300796 TTTCTGGTTT
* *
300806 TGAATCATGAAAAGAATA-ATGATTGTTACGAGAATCTTTGCTTTCCTTATTTAAGGGATGAACT
1 TGAATC-TGAAAAGAATAGA-GATTATTACGA-AATCTTTGCTTGCCTTATTTAAGGGATGAACT
* *
300870 TTGATTTTAAGAAAAATA-AGGCAAAGAAAAG-ATTTTCATGCAAAAGAAAATCATCAATATCAT
63 TTGA-TTTAAGGAAAATAGA-GCAAGGAAAAGAATTTT-ATGCAAAAGAAAATCATCAATATCAT
* *
300933 TTATCCTAATGAGGAGAA-AGTGTTTATAGTGCCTAATCACAATGTGAATGAAGACCATTACTAG
125 TTATCCTAATGAGGAGAATA-TGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAG
* * * * *
300997 ATTCCAGGCTT-GTCACAATAGAGGCGCGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCC
189 AATCCAAG-TTCGTCACAAT-GAGGCACGAACTTACACTTTACAAAAATTGGTCGGAAGAAAGCC
** * * * *
301061 TTTCTTAGGAAACCAAAGCGTCAATATCTTGTATCGTTATGTGAATACTAAGTTTATGGTGCCTA
252 TTTCTTACAAAACCAAAGCATCAATATCGTGTATC-TTATGAGAAGACTAAGTTTATGGTGCCTA
* *
301126 ATCCTAAAAAGAACGGGGATTAGTATGACTATTCATGTTTGTTTTATTTAAGAGATAAACTTTGA
316 ATCCTGAAAAGAACGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGA
* ** *
301191 TTCTATCAAAAAGAGTTGAAAGAAATGCTTTTCTTGTGAGGCCAAAGCGTTAATGTCATGTATCC
381 TTCTATCAAAAAGAGTTGAAAGAAATGCTTTTCTTGGGACACCAAA-CGTTAATATCATGTATCC
* * * * * * **
301256 TAATGAAGGAAATGTGTTTCTGGTTCCTAGTCATGAAAGGAATGGAGATTGTTATGAGAATCAAT
445 TAATGAAGGAAATGTGTTTCTAGTTCCTAATCATGAAAAGAATGGAGACTATCACAAGAATCAAT
* * * * * *
301321 GCTTGCCTTATTTAAGGGATGAACTTTGATCTTAAGGAAAATAGGGCAAAGAAAAGATTTACATG
510 GCTTGCCTTATTTAAGAGATAAACTTTGATCTTAACGAAAAGACGGAAAAGAAAAGATTTACATG
* * * * ** *
301386 CAAAAAAGAAATCGTCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATTAT-
575 CAAAAAACAAAGCATCAATATCATGTATCCTAATGAAAAGAATGTGTTTATAGTGCCTAATCATG
*
301450 AAAATGAATGAAGATCATTAC
640 AAAA-GAAT--AG---A-GAC
* *
301471 TAGAATCCTGAAAAGAATAGAGATTATTACGAAAATCTTTGCTTGCCTTATTTAAAGGTTGAACT
1 T-GAAT-CTGAAAAGAATAGAGATTATTACG-AAATCTTTGCTTGCCTTATTTAAGGGATGAACT
* * *
301536 TTGATTATAAGGAAAATAGAGTAAGGAAAAGAATTTTAGGCAAAAGAAAATCATCAATATCATTA
63 TTGATT-TAAGGAAAATAGAGCAAGGAAAAGAATTTTATGCAAAAGAAAATCATCAATATCATTT
*
301601 ATCCTAACGAGGAGAATATGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAGAAT
127 ATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAGAAT
** * * *
301666 CCTTGTTCATCACGAATGAGGAACGAACTTACACTTTACAAAAATTGGTTGGAAGAAAGCCTTTC
192 CCAAGTTCGTCAC-AATGAGGCACGAACTTACACTTTACAAAAATTGGTCGGAAGAAAGCCTTTC
* * *
301731 TTACAAAACTAAAGCATCAATATCGTGTATGCTTATGAGAAGACTAAGTTTGTGGTGCCTAATTC
256 TTACAAAACCAAAGCATCAATATCGTGTAT-CTTATGAGAAGACTAAGTTTATGGTGCCTAATCC
* * * *
301796 TGAAAAGAAGGGGGATTAGTGTGACTATTCATGTTTGTCTTATTTAAGAGTTAAACTTTGATTTT
320 TGAAAAGAACGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCT
* *
301861 ATCAAAAATAGTTGAACGAAATGCTTTTCTTGGGACACCAAA-GTTACAATATCATGTATCCTAA
385 ATCAAAAAGAGTTGAAAGAAATGCTTTTCTTGGGACACCAAACGTT--AATATCATGTATCCTAA
* *
301925 TGAAAGG-AATGTGTTTCTAATTTCC-AATCAATGAAAAGAATGGAGACTATCACAAGAGTCAAT
448 TG-AAGGAAATGTGTTTCT-AGTTCCTAATC-ATGAAAAGAATGGAGACTATCACAAGAATCAAT
* ** * * * *
301988 GCTTGCCTTATTTAAGAGATAAACTTTGAT-TCTATCGAAAAGACTTAAAAGAAATGCTTTTCTT
510 GCTTGCCTTATTTAAGAGATAAACTTTGATCT-TAACGAAAAGACGGAAAAGAAAAGATTTACAT
* * * * * * * *
302052 G-AGACACCAAAGCATCAATGTCATGTATCCTAGT-AAAAGTAATGTGTTTATGGTTCCTAGTCA
574 GCAAAAAACAAAGCATCAATATCATGTATCCTAATGAAAAG-AATGTGTTTATAGTGCCTAATCA
302115 TGAAAAGAATAGAGAC
638 TGAAAAGAATAGAGAC
* *
302131 TG--T-T-------AT-GAGA--A-T-C--AA----TGCTTGCCGTATTTATGGGATGAACTTTG
1 TGAATCTGAAAAGAATAGAGATTATTACGAAATCTTTGCTTGCCTTATTTAAGGGATGAACTTTG
* * * *
302175 ATCTTAAGGAAAATAGGGC-AGAGAAAA-AATTTACATGAAAAAGAAAGTCATCAATATCATTTA
66 AT-TTAAGGAAAATAGAGCAAG-GAAAAGAATTT-TATGCAAAAGAAAATCATCAATATCATTTA
* * *
302238 TCCTATTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATC
128 TCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAGAATC
* * * * **
302303 CAAGTTCGTCAAAATTAAGGCCCGAACTTACACTTTACAAAAATTTGTCAAAAGAAAGCCTTTCT
193 CAAGTTCGTCACAA-TGAGGCACGAACTTACACTTTACAAAAATTGGTCGGAAGAAAGCCTTTCT
** * *
302368 TATTAAACCAAAGCATCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAAACCT
257 TACAAAACCAAAGCATCAATATCGTGTAT-CTTATGAGAAGACTAAGTTTATGGTGCCTAATCCT
* ** ** **
302433 GAAAAGAATGGACATTAGTATGACTATTCATACTTGTCTTATTTAAGAGGCAAACTTTGA-T-TA
321 GAAAAGAACGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
** *** * * * * * * * *
302496 GT----AAGCCTTTCTTATAAATGTTTTTCCTGAGACACCAAAGCATCAATGTCATGTATCGTAA
386 -TCAAAAAG-AGTTGAAAGAAATGCTTTTCTTGGGACACCAAA-CGTTAATATCATGTATCCTAA
* * * * * * ** *
302557 TGAAAGGAAA-ATGTTTCTGGTT-GTAATCATGAAAAGAATAGAGACTGTTATGAGAATCAATGT
448 TG-AAGGAAATGTGTTTCTAGTTCCTAATCATGAAAAGAATGGAGACTATCACAAGAATCAATGC
* * * * * * * *
302620 TTGCCTTATTTAAGGGATGAACTTCT-CTTTTAAGGAAAATAGGGCAAAGAAAAGATTTACATGC
512 TTGCCTTATTTAAGAGATAAACTT-TGATCTTAACGAAAAGACGGAAAAGAAAAGATTTACATGC
* ** * * * * *
302684 AAAATA-AAATTATCAATGTCATTTATCCTAAT-AAGGATAACGTGTTTATAGTGCCTAATC
576 AAAAAACAAAGCATCAATATCATGTATCCTAATGAA-AAGAATGTGTTTATAGTGCCTAATC
302744 CCAAAATGAA
Statistics
Matches: 1064, Mismatches: 176, Indels: 101
0.79 0.13 0.08
Matches are distributed among these distances:
630 115 0.11
631 13 0.01
632 52 0.05
633 2 0.00
634 3 0.00
635 11 0.01
636 291 0.27
637 1 0.00
640 2 0.00
643 1 0.00
644 1 0.00
645 1 0.00
647 4 0.00
648 2 0.00
655 1 0.00
657 1 0.00
659 1 0.00
660 3 0.00
661 1 0.00
664 5 0.00
665 8 0.01
666 443 0.42
667 102 0.10
ACGTcount: A:0.37, C:0.13, G:0.18, T:0.31
Consensus pattern (653 bp):
TGAATCTGAAAAGAATAGAGATTATTACGAAATCTTTGCTTGCCTTATTTAAGGGATGAACTTTG
ATTTAAGGAAAATAGAGCAAGGAAAAGAATTTTATGCAAAAGAAAATCATCAATATCATTTATCC
TAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAGTGAATGAAGATCATTACTAGAATCCAA
GTTCGTCACAATGAGGCACGAACTTACACTTTACAAAAATTGGTCGGAAGAAAGCCTTTCTTACA
AAACCAAAGCATCAATATCGTGTATCTTATGAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAA
GAACGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCAAA
AAGAGTTGAAAGAAATGCTTTTCTTGGGACACCAAACGTTAATATCATGTATCCTAATGAAGGAA
ATGTGTTTCTAGTTCCTAATCATGAAAAGAATGGAGACTATCACAAGAATCAATGCTTGCCTTAT
TTAAGAGATAAACTTTGATCTTAACGAAAAGACGGAAAAGAAAAGATTTACATGCAAAAAACAAA
GCATCAATATCATGTATCCTAATGAAAAGAATGTGTTTATAGTGCCTAATCATGAAAAGAATAGA
GAC
Found at i:304229 original size:49 final size:49
Alignment explanation
Indices: 304153--304246 Score: 161
Period size: 49 Copynumber: 1.9 Consensus size: 49
304143 TGTCTATAGT
* * *
304153 GCCTAATCACAAATTGAATGAAGATCATTACTAGAATCCAAGTTCATTA
1 GCCTAATCACAAAATGAACGAAAATCATTACTAGAATCCAAGTTCATTA
304202 GCCTAATCACAAAATGAACGAAAATCATTACTAGAATCCAAGTTC
1 GCCTAATCACAAAATGAACGAAAATCATTACTAGAATCCAAGTTC
304247 GTCACAATCA
Statistics
Matches: 42, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
49 42 1.00
ACGTcount: A:0.43, C:0.20, G:0.12, T:0.26
Consensus pattern (49 bp):
GCCTAATCACAAAATGAACGAAAATCATTACTAGAATCCAAGTTCATTA
Found at i:304670 original size:525 final size:525
Alignment explanation
Indices: 303677--304704 Score: 1374
Period size: 525 Copynumber: 2.0 Consensus size: 525
303667 TGTTTATTGT
* * * * * * *
303677 GCCTAATCAGAAAATGAATGAAGATCATTTCTAGAATCCATGTTTGTCACAAATGAGGCACGAAT
1 GCCTAATCACAAAATGAACGAAAATCATTACTAGAATCCAAGTTCGTCACAAATAAGGCACGAAT
* * ** *
303742 TGAGGCTTTACAAAAATTGGTGAGAAGAAAACCTTTCTTACGAAACCAAAGTGTCAATTTCTTAT
66 TGAGACTTTACAAAAATTGGTGAGAAGAAAACATTTCTTACGAAACCAAAGCATCAATATCTTAT
* *
303807 ATCATTGTGAGAAGACTAAGTTTATGGTGCCTAATCCTAAAAAGAACGGGGATTAGTATGACTAT
131 ATCATTATGAGAAGACTAAGTTTATGGTGCCTAATCATAAAAAGAACGGGGATTAGTATGACTAT
* *
303872 TCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAAGAGTTGAAAGAAATACTTTT
196 TCATGTTTGTCTTAATTAAGAGACAAACTTTGATTCTATCAAAAAGAGTTGAAACAAATACTTTT
** *** * * * *
303937 CTTGTGACACCAAAATGTCAATGTCATGTATCCTAATGAAAAGAATGTGTTTCTGGTTCCTAGTC
261 CTTACGACACCAAAACACCAATGTCATCTACCCTAATGAAAAGAATGTGTTTCTGGTTCCAAATC
** * * ** * *
304002 ATGAAAAGAATGGAGACTGTTATGAGAATTAATGCTTGCCTTATTTAGGGGATGAACATTGATAT
326 ATGAAAAGAATAAAAACTATTACAAAAATTAATGCTTGCCTTATTTAAGGGATGAACATTGATAT
*
304067 TAAGGAAAATAGTGCAAAGAAAAGATTTACATGCAAAAGAAAATCATCAAAATCATTTATCCTAA
391 TAAGGAAAATAGGGCAAAGAAAAGATTTACATGCAAAAGAAAATCATCAAAATCATTTATCCTAA
* *
304132 TGAGGATAATGTGTCTATAGTGCCTAATCACAAAT-TGAATGAAGATCATTACTAGAATCCAAGT
456 TGACGAAAATGTGTCTATAGTGCCTAATCAC-AATGTGAATGAAGATCATTACTAGAATCCAAGT
304196 TCATTA
520 TCATTA
304202 GCCTAATCACAAAATGAACGAAAATCATTACTAGAATCCAAGTTCGTCAC-AATCAAGGCACGAA
1 GCCTAATCACAAAATGAACGAAAATCATTACTAGAATCCAAGTTCGTCACAAAT-AAGGCACGAA
*
304266 CTT-AGACTTTACAAAAATTGGTCG-GAAGAAAGA-ATTTCTTA-TAAGACCAAAGCATCAATAT
65 -TTGAGACTTTACAAAAATTGGT-GAGAAGAAA-ACATTTCTTACGAA-ACCAAAGCATCAATAT
* * * *
304327 CGTGTAT-TC-TTATGAGAAGACTGAGTTTATGGTGCCTAATCATGAAAATAATGGGGATTAGTA
126 C-T-TATATCATTATGAGAAGACTAAGTTTATGGTGCCTAATCATAAAAAGAACGGGGATTAGTA
*
304390 TGACTATTCATGTTTGTCTTAATTAAGAGACAAACTTTGATTCTATCAAGAACG-GTTGAAACAA
189 TGACTATTCATGTTTGTCTTAATTAAGAGACAAACTTTGATTCTATCAA-AAAGAGTTGAAACAA
* * * *
304454 ATGCTTTTCTTACGACACCAAAGCACCAATGTCATCTACCCTAATGAAAGGAATGTGTTTTTGGT
253 ATACTTTTCTTACGACACCAAAACACCAATGTCATCTACCCTAATGAAAAGAATGTGTTTCTGGT
* * *
304519 TCCAAATCATGTAAAGAATAAAAATTATTACAAAAATCT-TTGCTTGCCTTATTTAAGGGATGAA
318 TCCAAATCATGAAAAGAATAAAAACTATTACAAAAAT-TAATGCTTGCCTTATTTAAGGGATGAA
* * * * * * **
304583 CTTTGATTTTATGGAAAATAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATTAATATTGT
382 CATTGATATTAAGGAAAATAGGGCAAAGAAAAGATTTACATGCAAAAGAAAATCATCAAAATCAT
*
304648 TTATCCTAATGACGAAAATGTGTTTATAGTGCCTAATCACAATGTGAATGAAGATCA
447 TTATCCTAATGACGAAAATGTGTCTATAGTGCCTAATCACAATGTGAATGAAGATCA
304705 CTGCTAGATT
Statistics
Matches: 435, Mismatches: 58, Indels: 20
0.85 0.11 0.04
Matches are distributed among these distances:
524 8 0.02
525 413 0.95
526 11 0.03
527 3 0.01
ACGTcount: A:0.38, C:0.14, G:0.17, T:0.31
Consensus pattern (525 bp):
GCCTAATCACAAAATGAACGAAAATCATTACTAGAATCCAAGTTCGTCACAAATAAGGCACGAAT
TGAGACTTTACAAAAATTGGTGAGAAGAAAACATTTCTTACGAAACCAAAGCATCAATATCTTAT
ATCATTATGAGAAGACTAAGTTTATGGTGCCTAATCATAAAAAGAACGGGGATTAGTATGACTAT
TCATGTTTGTCTTAATTAAGAGACAAACTTTGATTCTATCAAAAAGAGTTGAAACAAATACTTTT
CTTACGACACCAAAACACCAATGTCATCTACCCTAATGAAAAGAATGTGTTTCTGGTTCCAAATC
ATGAAAAGAATAAAAACTATTACAAAAATTAATGCTTGCCTTATTTAAGGGATGAACATTGATAT
TAAGGAAAATAGGGCAAAGAAAAGATTTACATGCAAAAGAAAATCATCAAAATCATTTATCCTAA
TGACGAAAATGTGTCTATAGTGCCTAATCACAATGTGAATGAAGATCATTACTAGAATCCAAGTT
CATTA
Found at i:305363 original size:188 final size:189
Alignment explanation
Indices: 305039--305380 Score: 571
Period size: 188 Copynumber: 1.8 Consensus size: 189
305029 GAATCAATGT
* *
305039 TTGCCTTATTTAAGGGATGAACTTTGATCTTAAGAAAAATAGGGCAAGGAAAAGATTTACATGCA
1 TTGCCTTATTTAAGGAATGAACTTTGATCTTAAGAAAAATAGGGCAAGGAAAAGATTTACAGGCA
* * *
305104 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA
66 AAACAAAATCATCAATATCATTAATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAA
*
305169 TGAATGAAGAT-ATTGCTAGAATCATGAATAGAATAAAGATTATTATGAAAATGTTTGC
131 TGAATGAAGATCAATGCTAGAATCATGAATAGAATAAAGATTATTATGAAAATGTTTGC
* * *
305227 TTGCCTTATTTAAGGAATGAACTTTGATTTTAAGGAAAATAGGGCAAGGAAAAGATTTTCAGGCA
1 TTGCCTTATTTAAGGAATGAACTTTGATCTTAAGAAAAATAGGGCAAGGAAAAGATTTACAGGCA
305292 AAACAAAATCATCAATATCATTAATCCTAATGTA-GAGAATATGTTTATAGTGCCTAATCACAAA
66 AAACAAAATCATCAATATCATTAATCCTAATG-AGGAGAATATGTTTATAGTGCCTAATCACAAA
*
305356 GTGAATGAAGATCAATGCTAGAATC
130 ATGAATGAAGATCAATGCTAGAATC
305381 CATGTTTATC
Statistics
Matches: 142, Mismatches: 10, Indels: 3
0.92 0.06 0.02
Matches are distributed among these distances:
188 130 0.92
189 12 0.08
ACGTcount: A:0.41, C:0.11, G:0.18, T:0.30
Consensus pattern (189 bp):
TTGCCTTATTTAAGGAATGAACTTTGATCTTAAGAAAAATAGGGCAAGGAAAAGATTTACAGGCA
AAACAAAATCATCAATATCATTAATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAA
TGAATGAAGATCAATGCTAGAATCATGAATAGAATAAAGATTATTATGAAAATGTTTGC
Found at i:307606 original size:159 final size:158
Alignment explanation
Indices: 307385--309523 Score: 398
Period size: 159 Copynumber: 13.5 Consensus size: 158
307375 AGAAGACTAA
* ** *
307385 GTTTATGGTGCCTAATCATGAAAAGAATAGG-G-CT-TAGTATG-GCTATTC-ATGTTTATCTTA
1 GTTTATGGTGCCTAATCATGAAAAGAAT-GGAGACTGT--TATGAG--AATCAATGTTTGCCCTA
*
307445 TTTAAGAGACAAATTTTGATTCTATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAA
61 TTTAAG-GACAAACTTTGATTCTATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAA
*
307510 GCATCAATGTCTTGTATCTTAATGAAAGGAATAT
125 GCATCAATATCTTGTATCTTAATGAAAGGAATAT
* * * * *
307544 GTTTTTGGTTCCCAATCATGAAAAGAATGGAGACTGTTATGAGAATGAATGGTTGCCCTATTTAA
1 GTTTATGGTGCCTAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGTTTGCCCTATTTAA
* *** * * * * * ** *
307609 GGA-ATGAACTTTGATTTTAAGGAAAATAGG-GCAAAGAAAAGATTTCCATGCAAAAGAAAATCA
66 GGACA--AACTTTGATTCTATCAAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAGCA
* * * * *
307672 TTAATATCATT-TAACCTAATG-AGGAGAATGT
128 TCAATATC-TTGTATCTTAATGAAAG-GAATAT
* * * * * ** *
307703 GTTTGTGGTGCCTATTCA-GAAAATGAATGAAGAAC-ATTA-GTAGAATCCATGTTTGTGCTAAT
1 GTTTATGGTGCCTAATCATGAAAA-GAATGGAG-ACTGTTATG-AGAATCAATGTTTGCCCTATT
* * * * * *
307765 TAAGGCACGAACTTAGACTT-TA-CAAAAATTGGTGGGAAG-AAAGCCTTTCTTACGGA-ACCAA
63 TAAGG-ACAAACTTTGA-TTCTATCAAAAA-TGGTGGAAAGAAAAGCTTTTCTTGC-AACACCAA
* * ** *
307826 AGCATCAATATCTTGTAT-TCTCATTAGAA-GTCTAA
124 AGCATCAATATCTTGTATCT-TAATGA-AAGGAATAT
* * * * * * *
307861 GTTTATGGTGCCTAATCTTGATAAGAATGGGGATTAG-TATGATTATTC-ATGTTTGCCTTATTT
1 GTTTATGGTGCCTAATCATGAAAAGAATGGAGACT-GTTATGA-GAATCAATGTTTGCCCTATTT
* * * * *
307924 AAGAGACAAATTTTGATTCAATCAAAAATGGTGGGAAGAAATGCTTTTCTTGCAAC-CCTAAAGT
64 AAG-GACAAACTTTGATTCTATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACC-AAAGC
* * * * * *
307988 GTCAATGTCATGTATCGTAATGAAAGAAATGT
127 ATCAATATCTTGTATCTTAATGAAAGGAATAT
* * * * * * ** * *
308020 GTTTCTAGTTCCTAGTCATGAAAAGAATGTAGACTGTTACGAGAATCAATGCCTACCTTATTTAA
1 GTTTATGGTGCCTAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGTTTGCCCTATTTAA
** * * * * * * * * ** **
308085 GGGATGAACTTCGATTTTA-AAGAAAATAGG-GCAAAGAAAAGATTTACATGCAAAAGAAAATTA
66 -GGACAAACTTTGATTCTATCA-AAAAT-GGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAGCA
* * *
308148 TCAATGTCATT-TATCCTAATG-AGGAGAATAT
128 TCAATATC-TTGTATCTTAATGAAAG-GAATAT
* * * * * * * * *
308179 GTTTGTAGTGCCTAACCA-CAAAGTGAATGAAGATCAT-TTCT-AGAATCCAA-GTTAGTCAC-A
1 GTTTATGGTGCCTAATCATGAAA-AGAATGGAGA-C-TGTTATGAGAAT-CAATGTTTG-CCCTA
* * * * * ** * * * *
308239 ATTGAGGCACGAACTTAGACTT-TA-CAAAAATTAGTATAAAG-AAAGCCTTTCCTACAAAACCA
61 TTTAAGG-ACAAACTTTGA-TTCTATCAAAAA-TGGTGGAAAGAAAAGCTTTTCTTGCAACACCA
* * ** * * *
308301 ATGCTTCAATATCGCGTATCCTT-ATTAGAA-GACTAA
123 AAGCATCAATATCTTGTAT-CTTAATGA-AAGGAATAT
* * * * * * * *
308337 GTTTATGGTGCCTAATCCT-AAAACTAATGGGGATTAG-TATGACTATTC-ATGTTTGTCTTATT
1 GTTTATGGTGCCTAATCATGAAAA-GAATGGAGACT-GTTATGA-GAATCAATGTTTGCCCTATT
* * ** * * **
308399 TAAGAGGCAAACTTTGATTCTATAAAAAATAATTGAAAGAAATGCTTTT-TTGTGACACCAAAGC
63 TAAG-GACAAACTTTGATTCTATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAGC
* * * * * * *
308463 GTCAATGTCATGTATCCTATTGAATGGAATGT
127 ATCAATATCTTGTATCTTAATGAAAGGAATAT
* * * * *
308495 GTTTTTGGT-TCTCAATCATGAATAGAATGGAGACTGTTACGAGAATCAATGCTTG-CCTGATTT
1 GTTTATGGTGCCT-AATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGTTTGCCCT-ATTT
** * ** * * * * ** * ** *
308558 AAAGGATGAACTTTGATTTTAAGAAAAATAGG-GAAAATAAAAGATTTCCAAGCAAAAAGAAATC
64 -AAGGACAAACTTTGATTCTATCAAAAAT-GGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAGC
*
308622 AAT-AATATCATT-TATCTTAATG-AAGAGAATGT
127 -ATCAATATC-TTGTATCTTAATGAAAG-GAATAT
* ** ** * * * * * * * * *
308654 TTTTATAATGAGTAATCA-CAAAGCGAGTGAAGA-TCATTA-GTAAAATCCATGTTTGTCAC-AA
1 GTTTATGGTGCCTAATCATGAAA-AGAATGGAGACT-GTTATG-AGAATCAATGTTTG-CCCTAT
* * * * * * * * * * * *
308715 TTGAGGCACGAACTTAGATTTTAACAAAATTTGAGGGAAG-AAAGCCTTTCTTACAAAACCAAAG
62 TTAAGG-ACAAACTTTGATTCTATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAG
* * * * *
308779 CTTCAATATCGTATATCCT--TG-TAGGAATACT
126 CATCAATATCTTGTATCTTAATGAAAGGAATA-T
* * * * * * * * ** *
308810 AATTTATGGGGTCTATTCCTGAAAAGAATGG-GTATTAG-TATGACTATTC-ATGTTTATCTTAT
1 -GTTTATGGTGCCTAATCATGAAAAGAATGGAG-ACT-GTTATGA-GAATCAATGTTTGCCCTAT
* * * * * *
308872 TTAAGAGACAAACTTTGATTCTATAAAAAATAGTTGAAAGAAATGCTTTTCTTG-AGATACCAAT
62 TTAAG-GACAAACTTTGATTCTATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCA-ACACCAAA
** * * * *
308936 GTGTCAATGTCATGTATCCTAATGAAAGGAATGT
125 GCATCAATATCTTGTATCTTAATGAAAGGAATAT
* * * * * *
308970 GTTTTTGGTTCCTATTCATG-AAAGAATGGTGACTGTTACT-AGAATCAATGCTTG-CTTATTTA
1 GTTTATGGTGCCTAATCATGAAAAGAATGGAGACTGTTA-TGAGAATCAATGTTTGCCCTATTTA
** * * * * * * ** * ** *
309032 AGGGATGAACTTTAATTTTA-AAGAAAAT-ATGGCAAAGAAAAGATTTCCTAACAAAAGAAAATC
65 A-GGACAAACTTTGATTCTATCA-AAAATGGTGG-AAAGAAAAGCTTTTCTTGCAACACCAAAGC
* * *
309095 A-CTAATATCATT-TATCCTAAT-AAGAAGAATGT
127 ATC-AATATC-TTGTATCTTAATGAA-AGGAATAT
* * * * * * *
309127 GTTCATAGTGCCTAATCA-GAAAAGGAATGAAGA-TAATT-TCTAGAATCCATGTTTGCCC-AGT
1 GTTTATGGTGCCTAATCATGAAAA-GAATGGAGACT-GTTAT-GAGAATCAATGTTTGCCCTATT
* * * * * * * *
309188 TGAGGCACGATCTTAGACTTC-A-CAGAAATTGGTGGGAAG-AAAGCCTTTCTTGCGAA-GCCAA
63 TAAGG-ACAAACTTTGA-TTCTATCA-AAAATGGTGGAAAGAAAAGCTTTTCTTGC-AACACCAA
* * * * * *
309249 AGCATCAGTATCGTGTATCTTTATGTGAA-GACTAA
124 AGCATCAATATCTTGTATCTTAATG-AAAGGAATAT
* * * * ** ** * *
309284 GTTTATGGTGCCTGATCCTGAAAAAAATAGG-GATTAG-TATGATTATTTATGTTTGTCTTATTT
1 GTTTATGGTGCCTAATCATGAAAAGAAT-GGAGACT-GTTATGAGAATCAATGTTTGCCCTATTT
* * * * **
309347 AAGAGATAAACTTTGATTCAATCAAAAATGGTTGAAAGAAATGCTTTTCTTGTGACACCAAAGCA
64 AAG-GACAAACTTTGATTCTATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAGCA
* * * **
309412 TCAATGTCATGTATCCTAATGAAAGGAACGT
128 TCAATATCTTGTATCTTAATGAAAGGAATAT
* * * * * * *
309443 GTTTTTTGTGCCCAATCATGAAAAAAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATTTAA
1 GTTTATGGTGCCTAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGTTTGCCCTATTT-A
**
309508 AGGATGAACTTTGATT
65 AGGACAAACTTTGATT
309524 TTAAGGAAAA
Statistics
Matches: 1365, Mismatches: 470, Indels: 290
0.64 0.22 0.14
Matches are distributed among these distances:
155 4 0.00
156 17 0.01
157 228 0.17
158 483 0.35
159 588 0.43
160 36 0.03
161 9 0.01
ACGTcount: A:0.36, C:0.13, G:0.19, T:0.32
Consensus pattern (158 bp):
GTTTATGGTGCCTAATCATGAAAAGAATGGAGACTGTTATGAGAATCAATGTTTGCCCTATTTAA
GGACAAACTTTGATTCTATCAAAAATGGTGGAAAGAAAAGCTTTTCTTGCAACACCAAAGCATCA
ATATCTTGTATCTTAATGAAAGGAATAT
Found at i:313702 original size:51 final size:51
Alignment explanation
Indices: 313618--313740 Score: 196
Period size: 51 Copynumber: 2.4 Consensus size: 51
313608 ATATGAAAAG
* *
313618 TTGCTTGCATGTATCGATACATTTAATAGTGTATCGATACATCT-GGCAAA
1 TTGCCTGCATGTATCGATACATTTAATAATGTATCGATACATCTGGGCAAA
313668 TTTGCCTGCATGTATCGATACATTTTAA-AATGTATCGATACATCTGGGCAAA
1 -TTGCCTGCATGTATCGATACA-TTTAATAATGTATCGATACATCTGGGCAAA
313720 TTGCCTGCATGTATCGATACA
1 TTGCCTGCATGTATCGATACA
313741 AAGATCAGTG
Statistics
Matches: 68, Mismatches: 2, Indels: 4
0.92 0.03 0.05
Matches are distributed among these distances:
51 57 0.84
52 11 0.16
ACGTcount: A:0.29, C:0.18, G:0.18, T:0.35
Consensus pattern (51 bp):
TTGCCTGCATGTATCGATACATTTAATAATGTATCGATACATCTGGGCAAA
Found at i:313753 original size:51 final size:49
Alignment explanation
Indices: 313618--313760 Score: 166
Period size: 51 Copynumber: 2.8 Consensus size: 49
313608 ATATGAAAAG
* *
313618 TTGCTTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGCAAAT
1 TTGCCTGCATGTATCGATACA--AAATAGTGTATCGATACATCTGGCAAAT
313669 TTGCCTGCATGTATCGATACATTTTAAA-A-TGTATCGATACATCTGGGCAAA-
1 TTGCCTGCATGTATCGATACA----AAATAGTGTATCGATACATCT-GGCAAAT
313720 TTGCCTGCATGTATCGATACAAAGATCAGTGTATCGATACA
1 TTGCCTGCATGTATCGATACAAA-AT-AGTGTATCGATACA
313761 ATGTATCGAT
Statistics
Matches: 83, Mismatches: 2, Indels: 14
0.84 0.02 0.14
Matches are distributed among these distances:
47 2 0.02
48 1 0.01
50 1 0.01
51 68 0.82
52 7 0.08
53 4 0.05
ACGTcount: A:0.31, C:0.17, G:0.18, T:0.34
Consensus pattern (49 bp):
TTGCCTGCATGTATCGATACAAAATAGTGTATCGATACATCTGGCAAAT
Found at i:313767 original size:13 final size:13
Alignment explanation
Indices: 313749--313773 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
313739 CAAAGATCAG
313749 TGTATCGATACAA
1 TGTATCGATACAA
313762 TGTATCGATACA
1 TGTATCGATACA
313774 TTTGAGTAAT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:313851 original size:33 final size:33
Alignment explanation
Indices: 313814--313880 Score: 89
Period size: 33 Copynumber: 2.0 Consensus size: 33
313804 AGTAGCTTAA
*
313814 ATTGTATTGATACAAAAAAATATGTATCGATAC
1 ATTGTATCGATACAAAAAAATATGTATCGATAC
* ***
313847 ATTGTATCGATACAACATTTTATGTATCGATAC
1 ATTGTATCGATACAAAAAAATATGTATCGATAC
313880 A
1 A
313881 AATCGTTGAA
Statistics
Matches: 29, Mismatches: 5, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
33 29 1.00
ACGTcount: A:0.40, C:0.12, G:0.12, T:0.36
Consensus pattern (33 bp):
ATTGTATCGATACAAAAAAATATGTATCGATAC
Found at i:313854 original size:13 final size:13
Alignment explanation
Indices: 313836--313860 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
313826 CAAAAAAATA
313836 TGTATCGATACAT
1 TGTATCGATACAT
313849 TGTATCGATACA
1 TGTATCGATACA
313861 ACATTTTATG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:314796 original size:49 final size:49
Alignment explanation
Indices: 314735--315484 Score: 936
Period size: 49 Copynumber: 15.7 Consensus size: 49
314725 AAAAGGATGT
* * *
314735 CAATGTGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGAAGATGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * * * *
314784 CAATATGCTGATTCAAGGCCGGCGATATCGGGCTT----A--AAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* *
314827 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGATGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* *
314876 CAATATGCTGATTCAAGGCCAGCGATATTGGACTT----A--AAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* *
314919 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGATGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * * *
314968 CAATATGCTGATTCAAGGCCAGCGATATTGGACTTAAAGATAAAGATGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * *
315017 CAATATGCTGATTCAAGGCCGGCTATATTGGACTTAAAGATAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * *
315066 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAATGGTGAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * *
315115 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* *
315164 CAATATGCTGATTCAAGGCCAGCGATATTGGACTT----A--AAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
*
315207 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * *
315256 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* *
315305 CAATATGCTGATTCAAGGCCAGCGATATTGGACTT----A--AAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
*
315348 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * *
315397 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAATGATGGAAAAGGTGC
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT-G--AAGGTGC
* *
315449 CAATATGCTGATTCAAGGCCAGCTATATTGGGCTTA
1 CAATATGCTGATTCAAGGCCAGCTACATTGGACTTA
315485 GAAGGGTTGC
Statistics
Matches: 612, Mismatches: 62, Indels: 51
0.84 0.09 0.07
Matches are distributed among these distances:
43 151 0.25
45 4 0.01
47 4 0.01
49 413 0.67
50 1 0.00
52 39 0.06
ACGTcount: A:0.31, C:0.18, G:0.26, T:0.25
Consensus pattern (49 bp):
CAATATGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
Found at i:314892 original size:92 final size:92
Alignment explanation
Indices: 314726--315489 Score: 964
Period size: 92 Copynumber: 8.1 Consensus size: 92
314716 AGATGATGAA
* * *
314726 AAAGGATGTCAATGTGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGAAGATGCCAATATG
1 AAAGG-TGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATATG
* * *
314791 CTGATTCAAGGCCGGCGATATCGGGCTT
65 CTGATTCAAGGCCAGCGATATTGGACTT
*
314819 AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGATGCCAATATGC
1 AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATATGC
314884 TGATTCAAGGCCAGCGATATTGGACTT
66 TGATTCAAGGCCAGCGATATTGGACTT
*
314911 AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGATGCCAATATGC
1 AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATATGC
314976 TGATTCAAGGCCAGCGATATTGGACTT
66 TGATTCAAGGCCAGCGATATTGGACTT
* * * *
315003 AAAGATAAAGATGCCAATATGCTGATTCAAGGCCGGCTATATTGGACTTAAAGATAAAGGTGCCA
1 AAAG-----G-TGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCA
*
315068 ATATGCTGATTCAAGGCCAGCTATATTGGACTT
60 ATATGCTGATTCAAGGCCAGCGATATTGGACTT
* *
315101 AATGGTGAAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCA
1 -A-----AAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCA
315166 ATATGCTGATTCAAGGCCAGCGATATTGGACTT
60 ATATGCTGATTCAAGGCCAGCGATATTGGACTT
*
315199 AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATGTGC
1 AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATATGC
* * *
315264 TGAGTCAAGGCCAGCTACATTGGACTTAAAGAT
66 TGATTCAAGGCCAGCGATATTGGAC-T-----T
* * * *
315297 AAAGGTGCCAATATGCTGATTCAAGGCCAGCGATATTGGACTT----A--AAGGTGCCAATGTGC
1 AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATATGC
* *
315356 TGATTCAAGGCCAGCTACATTGGACTT
66 TGATTCAAGGCCAGCGATATTGGACTT
* *
315383 AAAGATGAAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAATGATGGAAAAGGTG
1 ----A--AAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT-G--AAGGTG
* *
315448 CCAATATGCTGATTCAAGGCCAGCTATATTGGGCTT
57 CCAATATGCTGATTCAAGGCCAGCGATATTGGACTT
315484 AGAAGG
1 A-AAGG
315490 GTTGCCACCG
Statistics
Matches: 605, Mismatches: 33, Indels: 63
0.86 0.05 0.09
Matches are distributed among these distances:
86 1 0.00
90 1 0.00
91 1 0.00
92 338 0.56
93 6 0.01
94 1 0.00
96 6 0.01
97 3 0.00
98 204 0.34
99 2 0.00
101 39 0.06
104 3 0.00
ACGTcount: A:0.32, C:0.18, G:0.26, T:0.25
Consensus pattern (92 bp):
AAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGCCAATATGC
TGATTCAAGGCCAGCGATATTGGACTT
Found at i:314970 original size:141 final size:141
Alignment explanation
Indices: 314820--315489 Score: 1088
Period size: 141 Copynumber: 4.7 Consensus size: 141
314810 ATCGGGCTTA
* * *
314820 AAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGATGCCAATATGCT
1 AAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCT
314885 GATTCAAGGCCAGCGATATTGGACTTAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGG
66 GATTCAAGGCCAGCGATATTGGACTTAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGG
314950 ACTTAAAGATG
131 ACTTAAAGATG
* * * * * *
314961 AAGATGCCAATATGCTGATTCAAGGCCAGCGATATTGGACTTAAAGATAAAGATGCCAATATGCT
1 AAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCT
* * *
315026 GATTCAAGGCCGGCTATATTGGACTTAAAGATAAAGGTGCCAATATGCTGATTCAAGGCCAGCTA
66 GATTCAAGGCCAGCGATATTGGAC-T-----TAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTA
* * *
315091 TATTGGACTTAATGGTG
125 CATTGGACTTAAAGATG
315108 AAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCT
1 AAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCT
315173 GATTCAAGGCCAGCGATATTGGACTTAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGG
66 GATTCAAGGCCAGCGATATTGGACTTAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGG
315238 ACTTAAAGATG
131 ACTTAAAGATG
315249 AAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCT
1 AAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCT
315314 GATTCAAGGCCAGCGATATTGGACTTAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGG
66 GATTCAAGGCCAGCGATATTGGACTTAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGG
315379 ACTTAAAGATG
131 ACTTAAAGATG
*
315390 AAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAATGATGGAAAAGGTGCCAATAT
1 AAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGAT---AAAGGTGCCAATAT
* *
315455 GCTGATTCAAGGCCAGCTATATTGGGCTTAGAAGG
63 GCTGATTCAAGGCCAGCGATATTGGACTTA-AAGG
315490 GTTGCCACCG
Statistics
Matches: 493, Mismatches: 26, Indels: 16
0.92 0.05 0.03
Matches are distributed among these distances:
141 317 0.64
142 1 0.00
144 42 0.09
145 4 0.01
146 1 0.00
147 128 0.26
ACGTcount: A:0.31, C:0.18, G:0.26, T:0.25
Consensus pattern (141 bp):
AAGGTGCCAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGCCAATATGCT
GATTCAAGGCCAGCGATATTGGACTTAAAGGTGCCAATGTGCTGATTCAAGGCCAGCTACATTGG
ACTTAAAGATG
Found at i:315528 original size:33 final size:31
Alignment explanation
Indices: 315477--315555 Score: 124
Period size: 33 Copynumber: 2.5 Consensus size: 31
315467 CCAGCTATAT
315477 TGGGC-TTAGAAGGGTTGCCACCGACTTGTG
1 TGGGCTTTAGAAGGGTTGCCACCGACTTGTG
315507 TGGGCTTTAGAAGAAGGTTGCCACCGACTTGTG
1 TGGGCTTTAGAAG--GGTTGCCACCGACTTGTG
315540 TGGGCTTTAGGAAGGG
1 TGGGCTTTA-GAAGGG
315556 AGAAAGATGC
Statistics
Matches: 45, Mismatches: 0, Indels: 6
0.88 0.00 0.12
Matches are distributed among these distances:
30 5 0.11
31 7 0.16
32 2 0.04
33 27 0.60
34 4 0.09
ACGTcount: A:0.19, C:0.16, G:0.38, T:0.27
Consensus pattern (31 bp):
TGGGCTTTAGAAGGGTTGCCACCGACTTGTG
Found at i:315627 original size:34 final size:35
Alignment explanation
Indices: 315570--315987 Score: 468
Period size: 34 Copynumber: 12.5 Consensus size: 35
315560 AGATGCCATA
* *
315570 GAGTTGTGGAC-TTAAAAAGGAAAAAGAGTGCCACG
1 GAGTTGTGGGCTTTGAAAA-GAAAAAGAGTGCCACG
315605 GAGTTGTGGGCTTT-AAAAGAAAAA-AGTGCCACG
1 GAGTTGTGGGCTTTGAAAAGAAAAAGAGTGCCACG
315638 GAGTTGTGGGCTTTGAAAAGGGAAAAAGAGTGCCACG
1 GAGTTGTGGGCTTTGAAAA--GAAAAAGAGTGCCACG
*
315675 GAGTTGTGGGCTTT-AAACAGAAAAAG-GTACCACG
1 GAGTTGTGGGCTTTGAAA-AGAAAAAGAGTGCCACG
* *
315709 GAGTTGTGGGCTTTGAAAAGAAGAAG-GTGCCATG
1 GAGTTGTGGGCTTTGAAAAGAAAAAGAGTGCCACG
* *
315743 GAGTCGTGGGCTTTGAAAAGAAGAAG-GTGCCACG
1 GAGTTGTGGGCTTTGAAAAGAAAAAGAGTGCCACG
*
315777 GAGTTGTGGGCTTTGAAAAGAAGAA-AGTGCCACG
1 GAGTTGTGGGCTTTGAAAAGAAAAAGAGTGCCACG
*
315811 GAGTTGTGGGCTTTGAAAAGAAGAAG-GTGCCACG
1 GAGTTGTGGGCTTTGAAAAGAAAAAGAGTGCCACG
* * *
315845 GAGTTGTGGGCTTTAAAAAGAAGAAG-GTGCCACA
1 GAGTTGTGGGCTTTGAAAAGAAAAAGAGTGCCACG
* *
315879 GAGTCGTGGGCTTT------AAAAACAGTGCCACG
1 GAGTTGTGGGCTTTGAAAAGAAAAAGAGTGCCACG
*
315908 GAGTCGTGGGCTTT------AAAAAGAGTGCCACG
1 GAGTTGTGGGCTTTGAAAAGAAAAAGAGTGCCACG
** *
315937 GAGTCATGGGCTTTGAAAAGAAGAAG-GTGCCACG
1 GAGTTGTGGGCTTTGAAAAGAAAAAGAGTGCCACG
*
315971 GAGGTGTGGGCTTTGAA
1 GAGTTGTGGGCTTTGAA
315988 GAAAAAATGC
Statistics
Matches: 347, Mismatches: 20, Indels: 33
0.87 0.05 0.08
Matches are distributed among these distances:
28 4 0.01
29 48 0.14
33 23 0.07
34 208 0.60
35 29 0.08
36 11 0.03
37 24 0.07
ACGTcount: A:0.32, C:0.13, G:0.35, T:0.20
Consensus pattern (35 bp):
GAGTTGTGGGCTTTGAAAAGAAAAAGAGTGCCACG
Found at i:315821 original size:102 final size:99
Alignment explanation
Indices: 315570--316005 Score: 537
Period size: 102 Copynumber: 4.4 Consensus size: 99
315560 AGATGCCATA
* * * *
315570 GAGTTGTGGACTTAAAAAGGAAAAAGAGTGCCACGGAGTTGTGGGCTTTAAAAGAAAAAAGTGCC
1 GAGTTGTGGGCTTTAAAA-G-AAAA-AGTGCCACGGAGTTGTGGGCTTTAAAAGAAGAAGGTGCC
* *
315635 ACGGAGTTGTGGGCTTTGAAAAGGGAAAAAGAGTGCCACG
63 ACGGAGTCGTGGGCTTTGAAAA--GAAGAAG-GTGCCACG
*
315675 GAGTTGTGGGCTTTAAACAGAAAAAGGTACCACGGAGTTGTGGGCTTTGAAAAGAAGAAGGTGCC
1 GAGTTGTGGGCTTTAAA-AGAAAAA-GTGCCACGGAGTTGTGGGCTTT-AAAAGAAGAAGGTGCC
*
315740 ATGGAGTCGTGGGCTTTGAAAAGAAGAAGGTGCCACG
63 ACGGAGTCGTGGGCTTTGAAAAGAAGAAGGTGCCACG
315777 GAGTTGTGGGCTTTGAAAAGAAGAAAGTGCCACGGAGTTGTGGGCTTTGAAAAGAAGAAGGTGCC
1 GAGTTGTGGGCTTT-AAAAGAA-AAAGTGCCACGGAGTTGTGGGCTTT-AAAAGAAGAAGGTGCC
* * *
315842 ACGGAGTTGTGGGCTTTAAAAAGAAGAAGGTGCCACA
63 ACGGAGTCGTGGGCTTTGAAAAGAAGAAGGTGCCACG
* * *
315879 GAGTCGTGGGCTTT--AA-AAACAGTGCCACGGAGTCGTGGGCTTT-AAA-AAG-A-GTGCCACG
1 GAGTTGTGGGCTTTAAAAGAAAAAGTGCCACGGAGTTGTGGGCTTTAAAAGAAGAAGGTGCCACG
*
315937 GAGTCATGGGCTTTGAAAAGAAGAAGGTGCCACG
66 GAGTCGTGGGCTTTGAAAAGAAGAAGGTGCCACG
* * * *
315971 GAGGTGTGGGCTTT-GAAGAAAAAATGCCACTGAGT
1 GAGTTGTGGGCTTTAAAAGAAAAAGTGCCACGGAGT
316006 CGTGAACTTT
Statistics
Matches: 299, Mismatches: 25, Indels: 25
0.86 0.07 0.07
Matches are distributed among these distances:
92 50 0.17
93 3 0.01
94 17 0.06
95 3 0.01
97 23 0.08
98 2 0.01
99 2 0.01
102 110 0.37
103 13 0.04
104 25 0.08
105 50 0.17
106 1 0.00
ACGTcount: A:0.32, C:0.13, G:0.34, T:0.20
Consensus pattern (99 bp):
GAGTTGTGGGCTTTAAAAGAAAAAGTGCCACGGAGTTGTGGGCTTTAAAAGAAGAAGGTGCCACG
GAGTCGTGGGCTTTGAAAAGAAGAAGGTGCCACG
Found at i:316016 original size:31 final size:30
Alignment explanation
Indices: 315981--316067 Score: 120
Period size: 30 Copynumber: 2.8 Consensus size: 30
315971 GAGGTGTGGG
315981 CTTTGAAGAAAAAATGCCACTGAGTCGTGAA
1 CTTTG-AGAAAAAATGCCACTGAGTCGTGAA
* *
316012 CTTTGAGACAAAATGCCACTGAGTCGTGGA
1 CTTTGAGAAAAAATGCCACTGAGTCGTGAA
* *
316042 CTTTGAGAAGAGATTGCCACTGAGTC
1 CTTTGAGAA-AAAATGCCACTGAGTC
316068 CCCACATAGG
Statistics
Matches: 50, Mismatches: 5, Indels: 2
0.88 0.09 0.04
Matches are distributed among these distances:
30 31 0.62
31 19 0.38
ACGTcount: A:0.32, C:0.18, G:0.25, T:0.24
Consensus pattern (30 bp):
CTTTGAGAAAAAATGCCACTGAGTCGTGAA
Found at i:317043 original size:476 final size:471
Alignment explanation
Indices: 316185--317573 Score: 1734
Period size: 476 Copynumber: 2.9 Consensus size: 471
316175 ATAACGCGAG
* * * * *
316185 TGAAGATCATTATTAAAATCCATGTTTGTCACAATTGAGGTGTGAACTTAGACTTTAACAAAACT
1 TGAAGATCATTACTAGAATCCATGTTTGTCCCAATTGAGG-CTGAACTTAGACTTT-ACAAAAAT
* * * * * ** *
316250 T-GAGGGAAAAAAGCCTTTCTTACGAAACCAAAGCTTCAATATCATATCTCCTTATGGGAAAACT
64 TGGTGGGAAGAAAGCCTTTCTTACGAAACC-AAGCTTCAATATCGTGTATCCTTATAAGAAGACT
* * * * *
316314 GAGTTTATGGTTCCTATTCCTCAAAAGAAT-GGGTATTAGTATGACTATTTATGTTTGTCTTATT
128 AAGTTTATGGTGCCTAATCCTAAAAAGAATAGGG-ATTAGTATGACTATTCATGTTTGTCTTATT
* * *
316378 TAAGAGGCAAACTTTGATTCTATCAAAAACGGTTCAAAGAAATGCTTTTCTTGAGACACCAATGT
192 TAAGAGGCAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGT
* * * * * *
316443 CTCAATGCCATGTATCCTAATGAAAGGAATGTGTTTTTGGTTCTCAATCATGAAAGGAATGGTGA
257 GTCAATTCC-TGTATCCTAATGAAAGGAATGTGTTTTTTGTTCCCAATCATGAAAGAAATGGAGA
* * * *
316508 TTGTTACGAGATTCAATGCTTCCCTTATTTAAGGGATGAACTTTAATTTTAAGAAAAATAGAGCG
321 CTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTAATTTTAA-AAAAATAG-GCG
*
316573 AAGAAAAGATTTCCATGTAAAAGAAAATCATCAATATCATTTATCCTAATAAAGAGAA-TGTGTT
384 AAGAAAAGATTTCCATGTAAAAGAAAATCATCAATATCATTTATCCTAATAAAGA-AAGTATGTT
* *
316637 TGTAGTGCCTAATCAGAAAATGAA
448 TATAGTGCCTAATCACAAAATGAA
*
316661 TGATGATCATTACTAGAATCCATGTTTGTCCCAATTGAGGCATGAACTTAGACTTTACAAAAATT
1 TGAAGATCATTACTAGAATCCATGTTTGTCCCAATTGAGGC-TGAACTTAGACTTTACAAAAATT
* * *
316726 GGTGGGAAGAAAGCCTTTCTTGC-AAAGCCAGAGCGTCAGTATCGTGTATCCTTATAAGAAGACT
65 GGTGGGAAGAAAGCCTTTCTTACGAAA-CCA-AGCTTCAATATCGTGTATCCTTATAAGAAGACT
* * * * * *
316790 AACTTTAGGGTGCCTAATCCTGAAAAGAATAGGGATTTGTATTATTATTCATGTTTGTCTTATTT
128 AAGTTTATGGTGCCTAATCCTAAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTT
* ** * *
316855 ACGAGATAAATTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAATG
193 AAGAGGCAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGTG
* * * *
316920 TCAATATCCTGTATCCTAATGAAAGGAATCTGTTTTTTGTGCCCAATCATGAAAAAAATAGAGAC
258 TCAAT-TCCTGTATCCTAATGAAAGGAATGTGTTTTTTGTTCCCAATCATGAAAGAAATGGAGAC
* * *
316985 TCTTATGATAATCAATGCTTGCCTTATTTAAAGGATGAACTTTAATTTTACAAAAAATAGG-GCA
322 TGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTAATTTTA-AAAAAATAGGCG-A
* * * **
317049 ATGAAAAGATTTCCATGTGAAAGAAAATCATCAATATCA-TTATCCCAAGAGGGAAAGTATGTTT
385 A-GAAAAGATTTCCATGTAAAAGAAAATCATCAATATCATTTATCCTAATAAAGAAAGTATGTTT
317113 ATAGTGCCTAATCACAAAATGAA
449 ATAGTGCCTAATCACAAAATGAA
* * *
317136 TGAAGATCATTACTAGAATCCATTTTTGTCACC-ATTGAGGCTCGAACTTAGGCTTTACTAAAAT
1 TGAAGATCATTACTAGAATCCATGTTTGTC-CCAATTGAGGCT-GAACTTAGACTTTACAAAAAT
* * * * *
317200 TGGTGGGATGTAAGCCTTTCTCACGAAACCAATGCTTCAATATTGTGTATCCTTATTAGAAGACT
64 TGGTGGGAAGAAAGCCTTTCTTACGAAACCAA-GCTTCAATATCGTGTATCCTTATAAGAAGACT
*
317265 AAGTTTATGGTGCCTAATCCTAAAAAGAATAGGGATTAATATGACTATTCATGTTTGTCTTATTT
128 AAGTTTATGGTGCCTAATCCTAAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTT
* * *
317330 AAGAGGCAAACTTTAATTCTATCAAAAACGGTTGAAAGAAATGCTTTTCTTGCAACACCAAAGCG
193 AAGAGGCAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGTG
* * * * *
317395 TCAATGTCATGTATCCTATTGAATGGAATGTATTTTTTTGGTTCCCAATCGTGAAAGAAATGGAG
258 TCAAT-TCCTGTATCCTAATGAAAGGAATGT-GTTTTTT-GTTCCCAATCATGAAAGAAATGGAG
* * **
317460 ACTGTTATGAGAATCAAGGCTTGCCTTATTTAAGGGATGAACTTTGATTTTAAGGAAATAGG-GA
320 ACTGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTAATTTTAAAAAAATAGGCG-
* * * *
317524 AAAAAAAGATTTCTAAGCAAAAGAAAATCAAT-AATATCATTTATCCTAAT
384 AAGAAAAGATTTCCATGTAAAAGAAAATC-ATCAATATCATTTATCCTAAT
317574 GAGGAGTGCA
Statistics
Matches: 783, Mismatches: 112, Indels: 36
0.84 0.12 0.04
Matches are distributed among these distances:
474 5 0.01
475 329 0.42
476 375 0.48
477 74 0.09
ACGTcount: A:0.35, C:0.14, G:0.18, T:0.33
Consensus pattern (471 bp):
TGAAGATCATTACTAGAATCCATGTTTGTCCCAATTGAGGCTGAACTTAGACTTTACAAAAATTG
GTGGGAAGAAAGCCTTTCTTACGAAACCAAGCTTCAATATCGTGTATCCTTATAAGAAGACTAAG
TTTATGGTGCCTAATCCTAAAAAGAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAG
AGGCAAACTTTGATTCTATCAAAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGTGTCA
ATTCCTGTATCCTAATGAAAGGAATGTGTTTTTTGTTCCCAATCATGAAAGAAATGGAGACTGTT
ATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTAATTTTAAAAAAATAGGCGAAGAAAA
GATTTCCATGTAAAAGAAAATCATCAATATCATTTATCCTAATAAAGAAAGTATGTTTATAGTGC
CTAATCACAAAATGAA
Found at i:317936 original size:50 final size:50
Alignment explanation
Indices: 317861--317974 Score: 192
Period size: 50 Copynumber: 2.3 Consensus size: 50
317851 TTTCACAATT
*
317861 TGTATCGATACATTGTTCACTGTATCGATACATTTTGGGTTTTACCCAGA
1 TGTATCGATACATTGTTCACTGTATCGATACATTCTGGGTTTTACCCAGA
* * *
317911 TGTATTGGTACATTGTTCATTGTATCGATACATTCTGGGTTTTACCCAGA
1 TGTATCGATACATTGTTCACTGTATCGATACATTCTGGGTTTTACCCAGA
317961 TGTATCGATACATT
1 TGTATCGATACATT
317975 TCTCAATATA
Statistics
Matches: 58, Mismatches: 6, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
50 58 1.00
ACGTcount: A:0.24, C:0.17, G:0.18, T:0.41
Consensus pattern (50 bp):
TGTATCGATACATTGTTCACTGTATCGATACATTCTGGGTTTTACCCAGA
Found at i:317992 original size:50 final size:50
Alignment explanation
Indices: 317861--317993 Score: 187
Period size: 50 Copynumber: 2.7 Consensus size: 50
317851 TTTCACAATT
* *
317861 TGTATCGATACATTGTTCACTGTATCGATACATTTTGGGTTTTACCCAGA
1 TGTATCGATACATTGTTCAATGTATCGATACATTCTGGGTTTTACCCAGA
* * *
317911 TGTATTGGTACATTGTTCATTGTATCGATACATTCTGGGTTTTACCCAGA
1 TGTATCGATACATTGTTCAATGTATCGATACATTCTGGGTTTTACCCAGA
* *
317961 TGTATCGATACATT-TCTCAATATATCAATACAT
1 TGTATCGATACATTGT-TCAATGTATCGATACAT
317994 CTAGGCATTT
Statistics
Matches: 73, Mismatches: 9, Indels: 2
0.87 0.11 0.02
Matches are distributed among these distances:
49 1 0.01
50 72 0.99
ACGTcount: A:0.26, C:0.17, G:0.16, T:0.41
Consensus pattern (50 bp):
TGTATCGATACATTGTTCAATGTATCGATACATTCTGGGTTTTACCCAGA
Found at i:320355 original size:51 final size:51
Alignment explanation
Indices: 320291--320458 Score: 309
Period size: 51 Copynumber: 3.3 Consensus size: 51
320281 TTATTTCCGA
320291 GAGGATACTCCAACCTCGATTTTATTCCCAAAACACCAATTTTTCACAATC
1 GAGGATACTCCAACCTCGATTTTATTCCCAAAACACCAATTTTTCACAATC
*
320342 GAGGATACTCCAACCCCGATTTTATTCCCAAAACACCAATTTTTCACAATC
1 GAGGATACTCCAACCTCGATTTTATTCCCAAAACACCAATTTTTCACAATC
*
320393 GAGGATACTCCAACCTCGATTTTATTCCCAAAACACCAATTTTTCACAATT
1 GAGGATACTCCAACCTCGATTTTATTCCCAAAACACCAATTTTTCACAATC
*
320444 AAGGATACTCCAACC
1 GAGGATACTCCAACC
320459 CCGTTATTTT
Statistics
Matches: 113, Mismatches: 4, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
51 113 1.00
ACGTcount: A:0.34, C:0.30, G:0.08, T:0.28
Consensus pattern (51 bp):
GAGGATACTCCAACCTCGATTTTATTCCCAAAACACCAATTTTTCACAATC
Found at i:320574 original size:79 final size:79
Alignment explanation
Indices: 320395--320575 Score: 231
Period size: 79 Copynumber: 2.3 Consensus size: 79
320385 TCACAATCGA
* * *** * *
320395 GGATACTCCAACCTCGATTTTATTCCCAAAACACCAATTTTTCACAATTAAGGATACTCCAACCC
1 GGATACTCCAACCCCGGTTTTATTTTTAAAACACAAATTTTTCACAATCAAGGATACTCCAACCC
*
320460 CGTTATTTTTGAGG
66 CGTTATTTTCGAGG
*
320474 GGATACTCCAACCCTGGTTTTATTTTTAAAACACAAATTTTTCACAATC-AGAGATACTCCAACC
1 GGATACTCCAACCCCGGTTTTATTTTTAAAACACAAATTTTTCACAATCAAG-GATACTCCAACC
320538 CCGTTATTTTCGAGG
65 CCGTTATTTTCGAGG
* *
320553 GGGTACT-CAGACCCCGTTTTTAT
1 GGATACTCCA-ACCCCGGTTTTAT
320576 CTCCAAAATA
Statistics
Matches: 88, Mismatches: 12, Indels: 4
0.85 0.12 0.04
Matches are distributed among these distances:
78 4 0.05
79 84 0.95
ACGTcount: A:0.29, C:0.25, G:0.13, T:0.33
Consensus pattern (79 bp):
GGATACTCCAACCCCGGTTTTATTTTTAAAACACAAATTTTTCACAATCAAGGATACTCCAACCC
CGTTATTTTCGAGG
Found at i:322455 original size:475 final size:476
Alignment explanation
Indices: 321511--329093 Score: 8490
Period size: 475 Copynumber: 16.0 Consensus size: 476
321501 GCGTTGTGAC
*** ** * *
321511 AAGGAGAATGTGTTTATAGTAAGTAATCACAAAGCGAATGAAGACCATTACTAAAATCCATGTTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
** * * * * *
321576 GTCACAATTGAGGTGCAAACTTAGACTTTA-ACAAAATTTGAGGGAAGAAAGTCTTTCTTATGAA
66 GTCACAATTGAGGCACGAACTTAGACTTTACA-AAAATTGGTGGGAAGAAAGCCTTTCTTACGAA
* ** * * *
321640 ACCAAAGCATT-AATATCGTATATCCTTATGGGAAGGCTAAGTTTATGATGCCTATTCCTGAAAA
130 ACCAAAGC-TTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAA
* * * * * *
321704 CAATGGGGATTAGTATGTCTATTCATGTTTGTCTTATTTAAAAGACAAACTCTGATTCTATCAAA
194 GAATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAA
* * * *** * **
321769 AATGGCTGAAAGAAATGCTTTTCTTGTGACACCAATTTGTCAATGTCTTGTATCCTAATGAAAAT
259 AACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGG
* * * * * *
321834 AATGTGTTTTTGGTTCCCAATCATGAAAAGAATGGTGGC-AGTTACGAGAATCACTGTTTCCCTT
324 AATGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTA-TTACGAGAATCAATGCTTGCCTT
* *
321898 -TTATAAGGGATAAACTTTAATTTTAAGGAAAATAGGGCAAAGAACAA-ATTTTCATGCAAAAGA
388 ATT-TAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAA-AAGATTTCCATGCAAAAGA
*
321961 AAATCATCAATACCATTTATGCC-AAT
451 AAATCATCAATATCATTTAT-CCTAAT
* * * * * * * *
321987 AATGAGAATGTGTTTGTTGTGCCCAAACAGAAAAGGAATGAAGATCATTACTAGAATTCATGTTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * * * * *
322052 GTCCCAATTGAGGCTCGAACTTAGGCTTTACAAAACTTAGTGGGAAGAAAGCCTTTCTTATGAAA
66 GTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAA
* * * * * *
322117 CCAAAGCATCAATTTCGTGTATCCTTATTAGAA-AGCTATGTTAATGGTGTCTAATCTTGAAAAG
131 CCAAAGCTTCAATATCGTGTATCCTTATTAGAAGA-CTAAGTTTATGGTGCCTAATCCTGAAAAG
* * * *
322181 AATTGGGATTAGTATGATTATTAATGTTTGTCTTATTTAAGAGACAAACTTTGTTTCAATAAAAA
195 AATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAAA
** ** **
322246 ATAGTTGAAAGAAAT-AATTTCTTGCGACACCAAAGCGTCAATGTCACATATCCTAATGAAAGGA
260 ACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGGA
* *
322310 ATGTGTTTCTT-GTTCCTAATCATGAAAAGAATGGAGACTACTACGAGAATCAATGCTTACCTTA
325 ATGTGTTT-TTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTA
* * * *
322374 TTTAAGGGATGAACTATAATTTTAAGAAAAATAGGGCAAAGAAAAAATTTTCATGCAAAAGAAAA
389 TTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
322439 TCATCAATATCATTTATCCTAAT
454 TCATCAATATCATTTATCCTAAT
* *
322462 AAGGAGAATGTGTTTATAGTGCCTAATCAGAAAATGAATGAAGATCATTACTAGAATCCAAGTTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * * * * ** *
322527 G-AACCAATTGAGGTACAAACTTAGGCTTTACAAAAATTAGCAGGAAGAAAGCCTTTCTCACGAA
66 GTCA-CAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAA
** * * * * * * * *
322591 AGTAATGCTTCAATACCATTTATACTTATTAGGAGATTAAGTTTATGGTGTGC-AATCCT-AAAA
130 ACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTG-CCTAATCCTGAAAA
* * * * * ** *
322654 TTAATTGGGATTAATATAACTATTTATGTTTGTCTTATTTAAGAGGCAAACTTCAATTCTATCAA
194 -GAATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAA
** * * * *
322719 AAACGGTTGAAAGAAATGCTTTTCTTATGATACCAAAGCGCCAATGTCATGTATCCTATTGAATG
258 AAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAG
* * * * * * * *
322784 GAATGTGTTTTTGGTTCCCAATCATGAAAGGAATGGAGACTGTTACGACAATCACTCCTTTCCCT
323 GAATGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTT
* * * *
322849 ATTTAAGGGATGAACTTTGATTTTAAGAAAAATAAGGCAAAGAAAAGATTTCCATACAAAAGAAA
388 ATTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
* * *
322914 ATCAACAATACCATTTATCTTAAT
453 ATCATCAATATCATTTATCCTAAT
* * * * *
322938 AAGGAGAATGTGTTTGTTGTACCTAATCA-AAAATGAATGAAGATCATTAGTTGAATCCATGTTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * * *
323002 CTC-CTAATTGAGGCATGAACTTAGACTTTACAAAAATTGGTGGAAAGAAAGCCTTTCTTACAAA
66 GTCAC-AATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAA
* * * * * *
323066 ACCAAAGCTTCAATACCGTGTACCCTTATTAGAAAACTAAGTTTCTGGTGCCTAATCCCGAAAAA
130 ACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAG
* * * * * *
323131 AATTAGCATTAGTATAATTATTCATGTTTGCCTTATTTAAGAGACAAACTTTGATTCAATCAAGA
195 AATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAAA
* *
323196 ACCGTTGAAAGAAATGCTTTTCTTGCGAC-CTCAAAGCATCAATGTCATGTATCCTAATGAGAA-
260 ACGGTTGAAAGAAATGCTTTTCTTGCGACAC-CAAAGCGTCAATGTCATGTATCCTAATGA-AAG
* *
323259 GAATGTGTTTCTT-ATTCCTAATCATGAAAAGAAGGGACG-CTATTACGAGAATCAATGCTTGCC
323 GAATGTGTTT-TTGGTTCCTAATCATGAAAAGAATGGA-GACTATTACGAGAATCAATGCTTGCC
*
323322 TTATTTAAGGGATGAACTTTAATTTTAAGAAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
386 TTATTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
*
323387 ACATCATCAATATCATTTATCCTAAT
451 AAATCATCAATATCATTTATCCTAAT
** *
323413 AAGGAGAATGTCATTATAGTGCCTAATCAGAAAATGAATGAAGATCATTACTAGAATCCATGTTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * *
323478 GTCCCAATTGAGGCACGAATTTAGACTTTACAAAAATTGGTAGGAAGAAAGCCTTTCTTACGAAA
66 GTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAA
* * * * * * *
323543 CAAAAGCATT-AATATCGTGTATCCATATGATAAGACAAAGTTTATGGTGCCTAATTCTAAAAAG
131 CCAAAGC-TTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAG
** * * * *
323607 AATAAGGATTAGTATGACTATTCATGTTTGTCTTATTTATGAGATAAACATTGATTCTATCAAAA
195 AATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAAA
* * * ** *
323672 ACGGTTGAAAGAAATGCTTTTCTTGCGACACCAATGTGTCAATGTGAT-TATCCTAACAAAAAGA
260 ACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGGA
* * * * * *
323736 ATGTCTTTTTTGTTCC-ACTCATGAAAAAAATAGAGACGATTACGAGAATCAATGCTTGCCTTAT
325 ATGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTAT
*
323800 TTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCAT-CAAAA-AAAA-
390 TTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAAT
*
323862 CATCAACATCATTTATCCTAAT
455 CATCAATATCATTTATCCTAAT
* * * * * * * *
323884 GAGGAGAATATGTTTATAGTGCCTAACCACAAATTGAATGAAAATTAATACTAGAATCCATGTTC
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * * *
323949 GTCACAACTGAGGCATGAACTTAGGCTTTAGAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAA
66 GTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAA
** * * * * *
324014 CCAATTCTTCTATATCATGTATCTTTATTAGAAGACTAAGTTTACGGCGCCTAATCCTGAAAAGA
131 CCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGA
** * ** * * *
324079 ATAAGGATTTGTATGACTATTCAAATTTTTCTTATTTAAGAGACAAACTTTAATTCTATCAAAAA
196 ATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAAAA
* * * * * * *
324144 CAGTTGAAAGAAAAGCTTTTCTGGCGACACTAAAGCGTCAATGTCATGTATCCTATTGAATGAAA
261 CGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGGAA
* * * * *
324209 TGTGTTTTTGGTTTCAAATCATGAAAGGAATGGAGACTGTTACGAGAATCAATGCTTGCCTTATA
326 TGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATT
* * * *
324274 TAAAGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCAAGC-AAA-AAAATC
391 TAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATC
324337 AAT-AATATCATTTATCCTAAT
456 -ATCAATATCATTTATCCTAAT
* ** * * * * *
324358 AAGGAAAATGTGTTTATAGTGAGTAATCATAAAACGAATGAAGATAATTACTAAAATCCAAGTTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* *** * *
324423 GTCATAATTGAGGCACGAACTTAGACTTTA-ACAAAATTTAAGGGAAGAAAGCCTTTATTACAAA
66 GTCACAATTGAGGCACGAACTTAGACTTTACA-AAAATTGGTGGGAAGAAAGCCTTTCTTACGAA
* * **
324487 ACCAAAGCTTCAATATCGTGTATCCTTA-AAGCAAGACTAAGTTTATGGTGCCTATTCCACAAAA
130 ACCAAAGCTTCAATATCGTGTATCCTTATTAG-AAGACTAAGTTTATGGTGCCTAATCCTGAAAA
** *
324551 GAA-TGGTTTTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATAAAA
194 GAATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAA
* * * *
324615 AACGATTGAAAGAAATGCTTTTTTTGCGACACCAAAGCATCAATGTCTTGTATCCTAATGAAAGG
259 AACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGG
* * * *** * *
324680 AATGTGTTTTTGGTTTC-ATTCATGAAAAAAATGGAGAAGGTTACGAGAATCAGTACTTGCCTTA
324 AATGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTA
* * * * * *
324744 TTTAAGGGATGAACTTTTATTTTAAGAAAAATAGGGAAAAGAAAAGAGTTCCACGTAAAAGAAAA
389 TTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* * *
324809 TCCTCAATACCTTTTATCCTAAT
454 TCATCAATATCATTTATCCTAAT
* * * * *
324832 AAAGAGAATGTGTTTGTTGTGCCTAATCAGAAAATGAATGAGGATCATTACTAGAATCCATGTTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * * *
324897 GTC-CTAATTGAGGAACAAACTTTGAGTTTACAAAAATT-GTGGGAAGAAAGCCTTTCTTACGAA
66 GTCAC-AATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAA
* * * * *
324960 ACCAAAGCATCAATATCGTGTATCCTTATTAGAAAACTAACTTTTTGGTGCCTAATCCTAAAAAG
130 ACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAG
* * * * * *
325025 AATTAGGATTTGTATGATTATTCATGTTTGTCTTATTTAAGGGACAAACTTTGATTCAATGAAAC
195 AATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAAA
* ** * * ** *
325090 ACAGTTGAAAGAAATGCTTTTCTTATGACATCAATGCGTCAATGTCATGCGTCCTAATGAAAAGA
260 ACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGGA
* * * *
325155 ATGTATTCCTT-GTTCCTAATCATGAAAAGAATGGAGACTAATATGAGAATCAATGCTTGCCTTA
325 ATGTGTT-TTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTA
325219 TTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAA-AAAATGATTTCCATGCAAAAGAAA
389 TTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAA-GATTTCCATGCAAAAGAAA
* *
325283 ATCATCAACATCATTTATCCTAGT
453 ATCATCAATATCATTTATCCTAAT
* * * * * * * *
325307 AAGGAGAATGTGTTTGTTGTACCAAATTAGAAAATGAATAAAGATCATTACAAGAATCCATGTTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * * *
325372 GTCTA-AATTGAGGCACGAATTTAGACTTTACAAAAATTGGTGGGAAAAAAGTCTTTCTTATGAA
66 GTC-ACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAA
* * * * * * * * *
325436 ACAAAAGCATAAATATCATGTATCCTTATGAGAAAACTAACTTTATGGTGCCTAATTCTAAAAAG
130 ACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAG
* * *
325501 AATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAA-AGACAAACATTGATTCTATCAAAA
195 AATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAAA
* * * *
325565 ATGGTTGAAAGAAATGCTTTTCTTGCGACACCAATGCATCAATGTCATGCATCCTAATGAAAGGA
260 ACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGGA
* * * * * ** *
325630 ATGTCTTTTTTGTTCC-ATTCTTGAAAAAAATGGAGACGGTTATGAGAATCAATGCTTGCCTTAT
325 ATGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTAT
* * * *
325694 TTAAGGGATGAACTTTAATTTTAAAGAAAATCGGGCAAAGAAAAGATATCCATGCAAAAGAAAAA
390 TTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAAT
*
325759 CATTAATATCATTTATCCTAAT
455 CATCAATATCATTTATCCTAAT
* * *
325781 GAGGAGAATATGTTTATAGTGCCTAA-CTACAAAATGAATGAAGATCATTACTAGAATCCTTGTT
1 AAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATCATTACTAGAATCCATGTT
* * * ** * * * *
325845 TGTCACAGTTGAGGCATGAACTTTGGGTTT-TAAAAATTGTTGAGAA-AAAGGCCTTTCTTACAA
65 TGTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAA-GCCTTTCTTACGA
* ** *
325908 AACTAGTGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCTTGAAAA
129 AACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAA
* **
325973 GAATAGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTTTATCAAA
194 GAATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAA
* * * * * * * * * *
326038 AAAGGTTGTAAGAAATGCTTTTCTGGCGACACTAAAGTGTTAATGTCATGTATCATACTGAATGA
259 AACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGG
* * * **
326103 AATGTGTTTTTTGGTTCCTAATCATGAAAGGAATGGAAACTGTTACGAGAATCAACACTTGCCTT
324 AATGTG-TTTTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTT
* * * * *
326168 ATTTAAGGGATAAACTTTGATTTTAAGGAAAATAGAGCAAA-AAAAGGATTTCTAAGCAAAAGAA
388 ATTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAA-GATTTCCATGCAAAAGAA
* *
326232 AATCAAT-AATATCACTTACCCTAAT
452 AATC-ATCAATATCATTTATCCTAAT
* * ** * ** ** *
326257 GAGGAGAATGTGTTTATAGAGAGTAATCATAAAGCGAATGAAGAAAATTACTAAAATCCATGTTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * * * * * * * * * * *
326322 TTCATAATTAAGGAACGAATTTAGACTTTA-ACAAATTTGAGTGAAGAAATCCTTTATTACAAAA
66 GTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAA
* * *
326386 CCAAAGCTTCAATATCGTATATCCTTA-TAGGAAGACTAAGTTTATGGTGCCTATTCCTCAAAAG
131 CCAAAGCTTCAATATCGTGTATCCTTATTA-GAAGACTAAGTTTATGGTGCCTAATCCTGAAAAG
* *
326450 AA-TGTGTATTAGTATGACTATTCATGTTTGTCATATTTAAGAGACAAACTTTGATTCAATCAAA
195 AATTG-GGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAA
* * * * * *
326514 AAAGGTTGAAAGAAATGCTTTTCTTGCAACACCGAAGTGTTAATGTCATGTATCCTAATAAAAGG
259 AACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGG
* * * * *
326579 AATGTGTTTTTGGTGCCCAATCATGAAAAAAATAGAGACTATTATGAGAATCAATGCTTGCCTTA
324 AATGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTA
* * * * *
326644 TTTAAGGG-T-AAATATTAATTTTATGGAAAATAAGGCAACGAAAAGATTTCCGTGCAAAAGAAA
389 TTTAAGGGATGAACT-TTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
*
326707 AACATCAATATCATTTATCCTAAT
453 ATCATCAATATCATTTATCCTAAT
* * ** * *
326731 GATGAGAATAAGTTTATAGTGCGTAATCACAAAATGAATGAAGATCATTACTAGAATCCATATTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * * ** * * *
326796 GTCACAGTTGTGACATAAACTTAGGCTTTGCAAAAATTGGTGGGAAGAAAGCCTTTCTTACAAAA
66 GTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAA
* * * * *
326861 CCAATGCCTCAATATCGTGTATCCCTATTAGAAGACTAAGTTGATGGTGCCTAATCCCGAAAAGA
131 CCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGA
* ** *
326926 ATCGGGATTAGTATGACTAGGCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCAATCAAAAA
196 ATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAAAA
* ** * * * *
326991 CGGTTGAAAGAAATGC-TTGCTTGAAACACTAAAGCATCAATGCCATGTATCCTAATAAAAGGAA
261 CGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGGAA
* * * * * *
327055 TGTATTTTTGGTGCCCAATCATGAAAAAAATGGAGACTATTACAAGAATCAATGCTTACCTTATT
326 TGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATT
* * * **
327120 TAAGGGATGAACTTTAATTTTATGGAAAATAGGGTAACGAAAAGATTTTTATGCAAAAGAAAAAT
391 TAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG-AAAAT
*
327185 -ATCAATATCGTTTATCCT-AT
455 CATCAATATCATTTATCCTAAT
* * *
327205 GAGGAGAATATGTTTATAGTGCCTAATTACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* ** * * ** *
327270 GTCGCTGTTAAGGCACAAACTTAGTTTTTACAAATATTGGTGGGAAGAAAGCCTTTCTTACGAAA
66 GTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAA
* * * *
327335 CTAAA-CTTCAATATCATGTATCCTTACTAGAAGACTAAGTTTATGGTGCCTAATCCT-AAAATA
131 CCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAA-G
* * * *
327398 AATGGGGATTAGTATGA-TGATTCATGTTTATCTTATTTAAGAGACAAACTTTGATTCTATAAAA
195 AATTGGGATTAGTATGACT-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAA
*** * * * * * * *
327462 AATAATTGAAAGAAATGCTTTTCTAGCTACACTAAAGTGTCAA-GTCATCTATTCT-ATTAAATG
259 AACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAA-G
* * * * *
327525 AAATGTGTTTTTGGGTCCTAATCATTAAAGGAATGGAGACTATTACGAGAATCAATGCTTGCCGT
323 GAATGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTT
* * * *
327590 ATTTAAGGGATGAACTTTGATATTAAGGAAAATAAGGCAAAGAAAAGATTTCCAAGCAAAAGAAA
388 ATTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAA
*
327655 ATCAAT-ACTATCATTTATCCTAAT
453 ATC-ATCAATATCATTTATCCTAAT
* * * * ** * * * * *
327679 GAGGTGAATGTGTTTATAGTGAGC-AATCATAAAGGGAATGAAGGTAATTCCGAAAATCCATGTT
1 AAGGAGAATGTGTTTATAGTG-CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTT
* * * * *
327743 TGTCAAAATTGAGGCACGAACATAGACTTTGAC-AAACTTTGAGGGAAGAAAGCCTTTCTTACGA
65 TGTCACAATTGAGGCACGAACTTAGACTTT-ACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGA
* * ** ** * *
327807 AACCAAACCTTCAATATCGTATATTATTATGGGAAGACTAAGTTTATGGTGCCTATTCCTCAAAA
129 AACCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAA
* * * *
327872 GAA-TGGGTATTAGTCTGAATATTCATGTTTGTCATATTTAAGAGACAAACTTTGATTCAATAAA
194 GAATTGGG-ATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAAT-CA
* * * *
327936 AAAACGATTGAAAGAAATGTTTTTCTTGTGACACCAAAGCGTCAATGTCATGAATCCTAATGAAA
257 AAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAA
* * * * * * *
328001 GGAATGTGTTTTTGGTGT-CGAGTAATGAAAA-AATTAGAGAATGTTACGAGAATCAATGTTTGC
322 GGAATGTGTTTTTGGT-TCCTAATCATGAAAAGAA-TGGAGACTATTACGAGAATCAATGCTTGC
* * *
328064 CTTATTTAAGGGATGAACTTTAATTTTATGGAAAATAGGGCAACGAAAAGATTTCCATGCAAATG
385 CTTATTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
*
328129 TGAAA-CATCAATATCATTTATCCTAAT
450 -AAAATCATCAATATCATTTATCCTAAT
* * * * * * *
328156 GACGAGAATATGTTTATAGTGCCTAATCACAAAATGAATAAAGCTCATTACTACAATCTATGTTT
1 AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
* * * * * *
328221 ATCACAATTGAGGCACGAATTTAGGCTTCACAAAAATTGGTGGGAAGAATGCCTTTCTTGCGAAA
66 GTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAA
* * * *
328286 GCAATGCTTCAATATCATGTATCCCTTATTAGAAGACTGAGTTTATGGTGCCTAATCCTGAAAAG
131 CCAAAGCTTCAATATCGTGTAT-CCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAG
* * *
328351 AATAGGGATTAGTATGATTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAA
195 AATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAAA
* * * * * * * * * *
328416 ACAGTTGAAAGAAATGCTTTTCTGGCTACACTAAAGCGTTAATGTCATTTATCCTATTCAATGAA
260 ACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGGA
* * * * **
328481 ATGTGTTTTTGGTTCCTAATCATTAAAGGAATCGAGACTGTTATTAGAATCAATGCTTGCCTTAT
325 ATGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTAT
* * * *
328546 TTAAGGGATGAACTTTGATATTAAGGAAAATAGGGCAAAGAATAGATTTCCAAGCAAAA-AAAAT
390 TTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAAT
*
328610 CAAT-AATATCATTTATCGTAAT
455 C-ATCAATATCATTTATCCTAAT
* ** * ** * * *
328632 GAA-GAGAATGTGTTTATAGCGAGTAATCATAAAGCGAATGAAGATAATTACTAAAATCAATGTT
1 -AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTT
* * * * * * * *
328696 TGCCATATTTGAGGCACGAGCTTAGACTTTA-ATAAAATTTGAGGGAAGAAGGCCTTTCTTATGA
65 TGTCACAATTGAGGCACGAACTTAGACTTTACA-AAAATTGGTGGGAAGAAAGCCTTTCTTACGA
* * * * *
328760 AACTAAAGCTTCAATATCGTATATCCTTA-TAGGAAGACTAAGTTTATGGTGTCTATTCCTCAAA
129 AACCAAAGCTTCAATATCGTGTATCCTTATTA-GAAGACTAAGTTTATGGTGCCTAATCCTGAAA
*
328824 AGAA-TGGGTATTAGTATGACTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCAATCA
193 AGAATTGGG-ATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCA
* *
328888 AAAACGGTTGAAAGAAATGCATTTCTTGCGACACCAAAGCGTCAATGTCACGTATCCTAATGAAA
257 AAAACGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAA
* * * * *
328953 GGAATGTATTTTTGGTT-CTCAATCATGAAAA-AGTGGAGAGTGTTACGAGAATCAATGTTTGCC
322 GGAATGTGTTTTTGGTTCCT-AATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCC
* * **
329016 TTATTTAAGAGATGAACTTTAA--TTATGGAAAATAGGGCAACCAAAAGATTTCCATGCAAAAGA
386 TTATTTAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
*
329079 AAAACATCAATATCA
451 AAATCATCAATATCA
329094 GGTAACCTAA
Statistics
Matches: 5968, Mismatches: 1030, Indels: 221
0.83 0.14 0.03
Matches are distributed among these distances:
470 2 0.00
471 278 0.05
472 167 0.03
473 687 0.12
474 1314 0.22
475 1647 0.28
476 1354 0.23
477 419 0.07
478 97 0.02
479 3 0.00
ACGTcount: A:0.37, C:0.14, G:0.17, T:0.32
Consensus pattern (476 bp):
AAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTT
GTCACAATTGAGGCACGAACTTAGACTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAA
CCAAAGCTTCAATATCGTGTATCCTTATTAGAAGACTAAGTTTATGGTGCCTAATCCTGAAAAGA
ATTGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCAATCAAAAA
CGGTTGAAAGAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGAAAGGAA
TGTGTTTTTGGTTCCTAATCATGAAAAGAATGGAGACTATTACGAGAATCAATGCTTGCCTTATT
TAAGGGATGAACTTTAATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATC
ATCAATATCATTTATCCTAAT
Found at i:329245 original size:159 final size:157
Alignment explanation
Indices: 328929--329333 Score: 605
Period size: 159 Copynumber: 2.6 Consensus size: 157
328919 CACCAAAGCG
* * * * *
328929 TCAATGTCACGTATCCTAATGAAAGGAATGTATTTTTGGTTCTCAATCATGAAA-AAGTGGAGAG
1 TCAATGTCACGTATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCATGAAATAAATAGAGAC
*
328993 TGTTACGAGAATCAATGTTTGCCTTATTTAAGAGATGAACTTTAATTATGGAAAATAGGGCAACC
66 TGTTACGAGAATCAATGCTTGCCTTATTTAAGAGATGAACTTTAATTATGGAAAATAGGGCAACC
329058 AAAAGATTTCCATGCAAAAGAAAAACA
131 AAAAGATTTCCATGCAAAAGAAAAACA
* * * * *
329085 TCAATATCAGGTAACCTAAAGAAAGGAATGTGTTTTTGGTTCCCAATCATGAAATAAATAGAGAT
1 TCAATGTCACGTATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCATGAAATAAATAGAGAC
* *
329150 TGTTATGAGAATCAATGCTTGCCTTATTTAAGGGATGAACTTTAATTTTATGGAAAATAGGGCAA
66 TGTTACGAGAATCAATGCTTGCCTTATTTAAGAGATGAACTTTAA--TTATGGAAAATAGGGCAA
* *
329215 CGAAATGATTTCCATGCAAAAGAAAAACA
129 CCAAAAGATTTCCATGCAAAAGAAAAACA
* * *
329244 TCAATGTCATGTATCCTATTGAAAGGAATGTGTTTTTGGTTCCCAATCATGAAATGAATAGAGAC
1 TCAATGTCACGTATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCATGAAATAAATAGAGAC
* *
329309 TATTACCAGAATCAATGCTTGCCTT
66 TGTTACGAGAATCAATGCTTGCCTT
329334 TTCTAAAGAA
Statistics
Matches: 222, Mismatches: 24, Indels: 3
0.89 0.10 0.01
Matches are distributed among these distances:
156 48 0.22
157 49 0.22
159 125 0.56
ACGTcount: A:0.38, C:0.13, G:0.19, T:0.30
Consensus pattern (157 bp):
TCAATGTCACGTATCCTAATGAAAGGAATGTGTTTTTGGTTCCCAATCATGAAATAAATAGAGAC
TGTTACGAGAATCAATGCTTGCCTTATTTAAGAGATGAACTTTAATTATGGAAAATAGGGCAACC
AAAAGATTTCCATGCAAAAGAAAAACA
Found at i:330004 original size:388 final size:388
Alignment explanation
Indices: 329397--330159 Score: 991
Period size: 388 Copynumber: 2.0 Consensus size: 388
329387 ATGAAAAGAG
* * **
329397 TATGTTTGTAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATTTTTTTCACCGT
1 TATGTTTGTAGTGCCTAATCAAAAAATGAATGAAGATCATTACTAGAATCCATTTTTGTCACCAA
* ** * *
329462 TGAGGCTCGAACTTAGGATTTATGAAAATTGGTGGGAAGAAAGCCTTTCTCACGAAACCAATGCT
66 TGAGGCACGAACTTAGGATTTACCAAAATTGGTGGGAAGAAAGCCTTTCTCACGAAACCAAAGCA
* * * *
329527 TCAATATTGTGTATCCTCATTAGAAGACTAAGTTTATGCTGCCTAATCTTGAAAATAATGGGGAT
131 TCAATATCGTGTATCCTCATTAGAAAACTAAGTTTATGCTACCTAATCTTGAAAAGAATGGGGAT
* * * *
329592 TAATATGACTATACATGTTTGTCTTATTTAAGAGGCAAACTTTAATTCTATCAAAAACGGTTGAA
196 TAATATGACTATACATGCTTGTCTTATTTAAGAGACAAACTTTAATTCAATCAAAAACAGTTGAA
* * * * ** * * *
329657 AGAAATGTTTTTCTTGCGACACCAAAGCGGCAATGTCATGTATCCTCTTGAATGGACTATGTTT-
261 A-AAATGCTTTTATTGCGACACCAAAGCAGCAATGTCATGCATCCTAATGAAAGGAATACGTTTC
* *
329721 TTGGTTCCTAATC-ATGAAAGGAATGGAGACTGCTACAAGAATCAATGCTTCTTAATAAGGAGAA
325 TT-GTTCCTAATCAATGAAAAGAATGGAGACTACTACAAGAATCAATGCTTCTTAATAAGGAGAA
*
329785 TATGTTTGTTGTGCCTAATCAAAAAATGAATGAAGATCATTACTAGAATCC-TTGTTTGTC-CCA
1 TATGTTTGTAGTGCCTAATCAAAAAATGAATGAAGATCATTACTAGAATCCATT-TTTGTCACC-
* * *
329848 AATGAGGCACGAACTTAGGCTTTACCAAAATTGGTGGGAAGAAAGCCTTTCTTAC-AAGTCCAAA
64 AATGAGGCACGAACTTAGGATTTACCAAAATTGGTGGGAAGAAAGCCTTTCTCACGAA-ACCAAA
* * * *
329912 GCATCAATATCGTGTGTCCTTATTAGAAAACTAAGTTTCTAG-TACCTAATAC-TGAAAAGAATT
128 GCATCAATATCGTGTATCCTCATTAGAAAACTAAGTTTAT-GCTACCTAAT-CTTGAAAAGAATG
* * * * * *
329975 GGGATTAGTATGATTATTCATGCTTGTCTTATTTAAGAGACAGACTTTGATTGAATCAAAAACAG
191 GGGATTAATATGACTATACATGCTTGTCTTATTTAAGAGACAAACTTTAATTCAATCAAAAACAG
* *
330040 TTGAAAAAATGCTTTTATTGCGACACCAAAGCATCAATGTCATGCATCCTAATGAAAGGAATGCG
256 TTGAAAAAATGCTTTTATTGCGACACCAAAGCAGCAATGTCATGCATCCTAATGAAAGGAATACG
* *
330105 TTTCTTGTTCCTAATCATATGAAAAGAATGGAGACTATTACGAGAATCAATGCTT
321 TTTCTTGTTCCTAATCA-ATGAAAAGAATGGAGACTACTACAAGAATCAATGCTT
330160 GCCTTATTTA
Statistics
Matches: 321, Mismatches: 46, Indels: 15
0.84 0.12 0.04
Matches are distributed among these distances:
387 67 0.21
388 219 0.68
389 35 0.11
ACGTcount: A:0.34, C:0.16, G:0.18, T:0.32
Consensus pattern (388 bp):
TATGTTTGTAGTGCCTAATCAAAAAATGAATGAAGATCATTACTAGAATCCATTTTTGTCACCAA
TGAGGCACGAACTTAGGATTTACCAAAATTGGTGGGAAGAAAGCCTTTCTCACGAAACCAAAGCA
TCAATATCGTGTATCCTCATTAGAAAACTAAGTTTATGCTACCTAATCTTGAAAAGAATGGGGAT
TAATATGACTATACATGCTTGTCTTATTTAAGAGACAAACTTTAATTCAATCAAAAACAGTTGAA
AAAATGCTTTTATTGCGACACCAAAGCAGCAATGTCATGCATCCTAATGAAAGGAATACGTTTCT
TGTTCCTAATCAATGAAAAGAATGGAGACTACTACAAGAATCAATGCTTCTTAATAAGGAGAA
Found at i:331399 original size:470 final size:472
Alignment explanation
Indices: 329770--331468 Score: 2109
Period size: 470 Copynumber: 3.6 Consensus size: 472
329760 AATCAATGCT
* *
329770 TCTTAATAAGGAGAATATGTTTGTTGTGCCTAATCAAAAAATGAATGAAGATCATTACTAGAATC
1 TCTTAATAAGGAGAATATGTTTATAGTGCCTAATCAAAAAATGAATGAAGATCATTACTAGAATC
* *
329835 CTTGTTTGTCCCAAATGAGGCACGAACTTAGGCTTTACCAAAATTGGTGGGAAGAAAGCCTTTCT
66 CATGTTTGTCCCAAATGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCT
* * *
329900 TAC-AAGTCCAAAGCATCAATATCGTGTGTCCTTATTAGAAAACTAAGTTTCTAGTACCTAATAC
131 TACGAA-ACCAAAGCATCAATATCGTGTATCCTTATTAGAAAACTAAGTTTATAGTACCTAATAC
* *
329964 TGAAAAGAATTGGGATTAGTATGATTATTCATGCTTGTCTTATTTAAGAGACAGACTTTGATTGA
195 TGAAAAGAATTGGGATTAGTATGATTATTCATGCTTGTCTTATTTAAGAGACAAACTTTGATTCA
* * *
330029 ATCAAAAACAGTTGAAAAAATGCTTTTATTGCGACACCAAAGCATCAATGTCATGCATCCTAATG
260 ATCAAAAACAGTTGAAAAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATG
* * *
330094 AAAGGAATGCGTTTCTTGTTCCTAATCATATGAAAAGAATGGAGACTATTACGAGAATCAATGCT
325 AAAGGAATGTGTTTCTGGTTCC---TC--ATGAAAAGAATGGAGACTGTTACGAGAATCAATGCT
330159 TGCCTTATTTAAGGGATGAACTTTAATTTTAA-GAAAACTAAGGCAAAGAAAAGATTTCCATGCA
385 TGCCTTATTTAAGGGATGAACTTTAATTTTAAGGAAAA-TAAGGCAAAGAAAAGATTTCCATGCA
330223 AAAGAAAATCATCAATATCATTTA
449 AAAGAAAATCATCAATATCATTTA
* * * ** * * *
330247 TTTTAACAAAGAGAATGGGTTTATAATACCTAATCAGAAAATGAATGAAGATCATTACTAGAATC
1 TCTTAATAAGGAGAATATGTTTATAGTGCCTAATCAAAAAATGAATGAAGATCATTACTAGAATC
* * * * *
330312 CATGTTTGTCCCAATTGAGGCATGAACTTAGACTTTTCAAAAATTGGTGGGAAGAAACCCTTTCT
66 CATGTTTGTCCCAAATGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCT
* * * * ** * *
330377 TACGAAACAAAAACATCAATATCGTGTATCCTTATGAGAAGACTAAGTTTAGGGTGCCTAATTCT
131 TACGAAACCAAAGCATCAATATCGTGTATCCTTATTAGAAAACTAAGTTTATAGTACCTAATACT
* * * * * * *
330442 AAAAAGAATGGGGCTTACTATG---A--C-T--ATGTCTTATTTAAGAGACAAACATTGATTCTA
196 GAAAAGAATTGGGATTAGTATGATTATTCATGCTTGTCTTATTTAAGAGACAAACTTTGATTCAA
* ** * * * * *
330499 TTAAAAATGGTTGAAAGAAATGCTTTTCTTGCAACACCAATGTGTCGATGTCGTGTATCCTAATG
261 TCAAAAACAGTTGAAA-AAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATG
* * * *
330564 AAAGGAATGTCTTTCTGGTTCCATTCATGAAAAAAATGGAGACGGTTATGAGAATCAATGCTTGC
325 AAAGGAATGTGTTTCTGGTTCC--TCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGC
* * *
330629 TTTATTTAAGGGATGAACTTTAATTTTGAGGAAAATAAGGCAAAGAAAAGATTTTCATGCAAAAG
388 CTTATTTAAGGGATGAACTTTAATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAG
*
330694 -AAATACATCAATATTATTTA
453 AAAAT-CATCAATATCATTTA
* * * *
330714 TCCTAATTAGGGGAATATGTTTATAGTGCCTAA-CAACAAAATGAAAGAAGATCATTACTAGAAT
1 TCTTAATAAGGAGAATATGTTTATAGTGCCTAATCAA-AAAATGAATGAAGATCATTACTAGAAT
* * ** ** * * ** *
330778 CCATGTCTGTCACAGTTGAGGCAAAAAACTTAGGCATTAGAAAAATTGGCAGAAAGAAAGCCTTT
65 CCATGTTTGTCCCAAATGAGGC-ACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTT
* * * * * * *
330843 CATACGAAACCAATGCTTCAATATCGTGTATCATTATTAGAAAACTAAGTTTATGGTGCCTAATC
129 CTTACGAAACCAAAGCATCAATATCGTGTATCCTTATTAGAAAACTAAGTTTATAGTACCTAATA
* * * * **
330908 CTGAAAAGAATAGGGATTAGTATGATTATTCATGTTTGTCTTAATTAAAAGACAAACTTCAATTC
194 CTGAAAAGAATTGGGATTAGTATGATTATTCATGCTTGTCTTATTTAAGAGACAAACTTTGATTC
* * * * * * *
330973 TATCAAAAACGGTTGAAAGAAATGCTTTTCTTACGATATCAAAGCGTCAATGTCATGTACCCTAT
259 AATCAAAAACAGTTGAAA-AAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAA
* * ** *
331038 TGAATGGAATGTGTCTT-TGGTT-C-CATGAAAGGAACAGAGACTGTTACGACAATCAATGCTTG
323 TGAAAGGAATGTGT-TTCTGGTTCCTCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTG
* * * *
331100 CCTTATTTAAGGGATGAACTTTGA-TTTAAGGAAAATAGGGCAAAGAAAAGATTACCATACAAAA
387 CCTTATTTAAGGGATGAACTTTAATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAA
* *
331164 GAAAATCAACAATACCATTTA
452 GAAAATCATCAATATCATTTA
* * *
331185 TCTTAATAAGGAGAATGTGTTTGTTGTGCCTAATCAAAAAATGAATGAAGATCATTACTAGAATC
1 TCTTAATAAGGAGAATATGTTTATAGTGCCTAATCAAAAAATGAATGAAGATCATTACTAGAATC
*
331250 CCTGTTTGTCCCAAATGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCT
66 CATGTTTGTCCCAAATGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCT
* * *
331315 TAC-AAGTCCAAAGCATCAATATCGTGTGTCCTTATTAGAAAACTAAGTTTCTAGTACCTAATAC
131 TACGAA-ACCAAAGCATCAATATCGTGTATCCTTATTAGAAAACTAAGTTTATAGTACCTAATAC
* *
331379 TGAAAAGAATTGGGATTAGTATGATTATTCATGCTTGTCTTATTTAAGAGACAGACTTTGATTGA
195 TGAAAAGAATTGGGATTAGTATGATTATTCATGCTTGTCTTATTTAAGAGACAAACTTTGATTCA
331444 ATCAAAAACAGTTGAAAAAATGCTT
260 ATCAAAAACAGTTGAAAAAATGCTT
331469 ATAGTGCCTA
Statistics
Matches: 1029, Mismatches: 175, Indels: 44
0.82 0.14 0.04
Matches are distributed among these distances:
466 6 0.01
467 173 0.17
468 112 0.11
469 53 0.05
470 219 0.21
471 120 0.12
472 62 0.06
473 1 0.00
474 2 0.00
475 1 0.00
476 94 0.09
477 184 0.18
478 2 0.00
ACGTcount: A:0.37, C:0.14, G:0.18, T:0.31
Consensus pattern (472 bp):
TCTTAATAAGGAGAATATGTTTATAGTGCCTAATCAAAAAATGAATGAAGATCATTACTAGAATC
CATGTTTGTCCCAAATGAGGCACGAACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCT
TACGAAACCAAAGCATCAATATCGTGTATCCTTATTAGAAAACTAAGTTTATAGTACCTAATACT
GAAAAGAATTGGGATTAGTATGATTATTCATGCTTGTCTTATTTAAGAGACAAACTTTGATTCAA
TCAAAAACAGTTGAAAAAATGCTTTTCTTGCGACACCAAAGCGTCAATGTCATGTATCCTAATGA
AAGGAATGTGTTTCTGGTTCCTCATGAAAAGAATGGAGACTGTTACGAGAATCAATGCTTGCCTT
ATTTAAGGGATGAACTTTAATTTTAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAA
ATCATCAATATCATTTA
Found at i:331682 original size:263 final size:262
Alignment explanation
Indices: 331210--331731 Score: 719
Period size: 263 Copynumber: 2.0 Consensus size: 262
331200 TGTGTTTGTT
* * * **
331210 GTGCCTAATCAAAAAATGAATGAAGATCATTACTAGAATCCCTGTTTGTCCCAAATGAGGCACGA
1 GTGCCTAATCAAAAAATGAAAGAAGATCATTACTAGAATCCATGTTTGTCACAAATGAGGCAAAA
* ** *
331275 ACTTAGGCTTTACAAAAATTGGTGGGAAGAAAGCCTTTCTTACAAGTCCAAAGCATCAATATCGT
66 ACTTAGGCATTACAAAAATTGGCAGGAAGAAAGCCTTTCTTACAAGACCAAAGCATCAATATCGT
* * * * *
331340 GTGTCCTTATTAGAAAACTAAGTTTCTAGTACCTAATACTGAAAAGAATTGGGATTAGTATGATT
131 GTATCATTATTAGAAAACTAAGTTTATAGTACCTAATACTAAAAAGAATAGGGATTAGTATGATT
* * * *
331405 ATTCATGCTTGTCTTATTTAAGAGACAGACTTTGATTGAATCAAAAACAGTTGAAA-AAATGCTT
196 ATTCATGCTTGTCTTAATTAAAAGACAAACTTTGATTCAATC-AAAACAGTTGAAAGAAATGCTT
331469 ATA
260 ATA
**
331472 GTGCCTAA-CAACAAAATGAAAGAAGATCATTACTAGAATCCATGTTTGTCACAGTTGAGGCAAA
1 GTGCCTAATCAA-AAAATGAAAGAAGATCATTACTAGAATCCATGTTTGTCACAAATGAGGC-AA
* * *
331536 AAACTTAGGCATTAGAAAAATTGGCAGGAAGAAAGCCTTT-TGTACGAA-ACCAATGCTTCAATA
64 AAACTTAGGCATTACAAAAATTGGCAGGAAGAAAGCCTTTCT-TAC-AAGACCAAAGCATCAATA
* * *
331599 TCGTGTATCATTATTAGAAAACTAAGTTTATGGTGCCTAATCCTAAAAAGAATAGGGATTAGTAT
127 TCGTGTATCATTATTAGAAAACTAAGTTTATAGTACCTAATACTAAAAAGAATAGGGATTAGTAT
* *
331664 GATTATTCATGTTTGTCTTAATTAAAAGACAAACTTTGATTCTATCAAAACAGTTGAAAGAAATG
192 GATTATTCATGCTTGTCTTAATTAAAAGACAAACTTTGATTCAATCAAAACAGTTGAAAGAAATG
331729 CTT
257 CTT
331732 TTCTGACGAT
Statistics
Matches: 227, Mismatches: 28, Indels: 9
0.86 0.11 0.03
Matches are distributed among these distances:
261 3 0.01
262 66 0.29
263 156 0.69
264 2 0.01
ACGTcount: A:0.38, C:0.15, G:0.17, T:0.30
Consensus pattern (262 bp):
GTGCCTAATCAAAAAATGAAAGAAGATCATTACTAGAATCCATGTTTGTCACAAATGAGGCAAAA
ACTTAGGCATTACAAAAATTGGCAGGAAGAAAGCCTTTCTTACAAGACCAAAGCATCAATATCGT
GTATCATTATTAGAAAACTAAGTTTATAGTACCTAATACTAAAAAGAATAGGGATTAGTATGATT
ATTCATGCTTGTCTTAATTAAAAGACAAACTTTGATTCAATCAAAACAGTTGAAAGAAATGCTTA
TA
Found at i:334859 original size:19 final size:20
Alignment explanation
Indices: 334816--334866 Score: 77
Period size: 20 Copynumber: 2.6 Consensus size: 20
334806 TACAAGCTAA
**
334816 TGTATCGATACATTTTTTGG
1 TGTATCGATACATACTTTGG
334836 TGTATCGATACATACTTT-G
1 TGTATCGATACATACTTTGG
334855 TGTATCGATACA
1 TGTATCGATACA
334867 AGTTTGGCTA
Statistics
Matches: 29, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
19 13 0.45
20 16 0.55
ACGTcount: A:0.25, C:0.14, G:0.18, T:0.43
Consensus pattern (20 bp):
TGTATCGATACATACTTTGG
Done.