Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold369
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 1106593
ACGTcount: A:0.32, C:0.18, G:0.17, T:0.33
File 1 of 6
Found at i:2456 original size:476 final size:476
Alignment explanation
Indices: 1217--8836 Score: 8503
Period size: 476 Copynumber: 16.1 Consensus size: 476
1207 GATTTTGTTT
* * * * * * * *
1217 TCCATTCTTTCCAAGATTTGGAACCAAGAACACATTCCATTTATTAGAATACATGGCATTGATAC
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
* * * *
1282 TTTGGTGTTGCAA-AAATAGCTTTTCTTTCCACCGTTATTGATAGAATTAAAGTTTTTCTCTTAA
66 TTTGGTGTCGCAAGAGA-AGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAA
* * * *
1346 ATAAGAC-AACATGAATACTCATACCAATCCCCATTCTATTT-AGGATTAGGCACCATCAACCTA
130 ATAAGACAAACATGAATACTCATACTAATCCCCATTCT-TTTCTGGATTAGGCACCATAAACATA
** * * *
1409 CCCTTCTCATAAGGATGCATGATATTGATGCTTTGGTTTCGCAAGAAAC-ATTTTCTTCCCACTA
194 GTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTT-TTCCCACCA
* * * *
1473 ATTTTTGAAAAGTCTATGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCAT
258 ATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCAT
* * * * *
1538 TCATTTCATGATTAGGCATTATAAACACATTCTCCTCATTAAGATAAA-GATA-TGA-GATTTTG
323 TCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTC
* * *
1600 TTTTGCATGAAAATCTTTTCTTTG-CTCTATTTTCCTT-AAATCAAAGTTTG-ACCCTAAAATAA
388 TTTTGCATGAAAATCTTTTCTTTGCCT-TATTTTCCTTAAAATCAAAGTTTGTA-CTTTAAATGA
* * *
1662 GACAAGCATTGATTCTC-AAAACAGTT
451 GACATGCATTGATTCTCGTAAA-AGTC
* * * * *
1688 TCCATCCTTTCCAAGATTGGGAACCAAGAACACATTTCCTTTATTAGGATACATGACATTGATGC
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
* ** * * *
1753 TTTGGTGTCGCAA-AAATAGCTTTCTCTTTCCACCACTAGTGATAGAATCAAAGTTGTGTCGCTA
66 TTTGGTGTCGCAAGAGA-AGCTTT-TCTTTCCACCGTTATTGATAGAATCAAAGTT-TGTCTCTT
* * * *
1817 AAATATGA-GAACATGAATACTCATGTACTAATCCCCATTCTTTTCAGGATTACGCACCATAAAC
128 AAATAAGACAAACATGAATACTCA--TACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAAC
* * * ** * *
1881 ATAGTCTTCTTATAATGATACATAATATTGATGCTTTGGTTTCAAAAGAAACACTTTCTTGCCC-
191 ATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTT-TTTCCCA
* * * *
1945 CCAAATTTTGAAAAGTT-TAGGTTTGTGCCTCAAATGAGAC-AACTATGGA-TCTAGTAAGGATC
255 CCAATTTTTGTAAA-TTCTAAGTTCGTGCCTCAAATGAGACAAAC-ATGGATTCTAGTAAGGATC
* *
2007 TTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCCTCAATAGTATAAATGATATTGATG
318 TTCATTCATTTCGTGATTAGGCACTATAAACACATTC-TCCTCATTAGGATAAATGATATTGATG
* * * * * *
2072 GTTTTTTCTTTGGCATGAAAATCCTTTT-TTTGCCCTATTTTACTTAAAATCAGAGTTTGTCCCT
382 G--TTTTCTTTTGCATGAAAAT-CTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTT
* * * ** *
2136 TCAAT-AAAGCAAGCATTGA-TCTTTTAACAGTC
444 TAAATGAGA-CATGCATTGATTCTCGTAAAAGTC
** * *
2168 TCCATTCTTTTCAA-ACTTAAGAACCAAAAACATATTCCCTTCGTTAGGATACATGACATTGATG
1 TCCATTCTTTTCAAGA-TTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
*
2232 CTTTGGTGTCGCAA-AGAAGCTTTTCTTTCCACCGTTATTGATAGAATTGAAA-TTTGTCTCTTA
65 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAA-TCAAAGTTTGTCTCTTA
2295 AATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACC-TCAAACAT
129 AATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCAT-AAACAT
* * * * * * * *
2359 AGTCTTTTGATAAGAATACATGATATTGATGATTTGGTTTTGCTAGAAATGCTTTTTTCTCACCA
193 AGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCCACCA
*
2424 ATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTTAC
258 ATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA-
* * * * * * *
2489 TTAATGT-ATGATTAGGCAGTATAAATACATTCTCCTAATTACGATAAATGATATTGATGGTTTT
322 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
* * *
2553 -TATTTGCATGGAAATCTTTTCTTTGCCTTAGTTTCCTTAAATTCAAAGTTTGTACTTTAAATGA
387 CT-TTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA
* * *
2617 GACATGCGTTGATTCTTGTAAAAGTA
451 GACATGCATTGATTCTCGTAAAAGTC
* * *
2643 TCCATTC-TTTCTAAGATTGGGAACCGAAAACACATTCCCCTCATTAAGATACATGACATTGATG
1 TCCATTCTTTTC-AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
* * **
2707 CTTTGGTGTCACAAGAGATGCTTTTCTTCTCTGCCGTTATTGATAGAATCAAAGTTTGTCTCTTA
65 CTTTGGTGTCGCAAGAGAAGCTTTTCTT-TCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTA
* * * * *
2772 AATATGAGAAACACGAATACTCATACAAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
129 AATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATA
* * * * * * * **
2837 GTTTTCTCATAAGGATACACGATATTGATGCTTTGGCTTCG-ATAAAAATGCATTCTTCCCATTA
194 GTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCA-AGAAACGCTTTTTTCCCACCA
** * * *
2901 ATTTTTG-AAATCTCTAAGTTTATGCCTCAAATGAAACAAATATGGATTCTAATAAGGATCTTCA
258 ATTTTTGTAAAT-TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
* * * *
2965 CTAATTTCGTGATTAGGCACTGTAATCACATTCTCCTCATTAGGATAAATGATA-TGATGGTTTT
322 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
* * * * * * * * * *
3029 CTTTGGCACGGAAATCTTTTCTATT--CTTATCTTACTTAAAATCAAAGTTGGTCCCTTCAATAA
387 CTTTTGCATGAAAATCTTTTCT-TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA
* * * *
3092 GGCAAGCATTGATTCTTGTAATAGTC
451 GACATGCATTGATTCTCGTAAAAGTC
* * ** * * * *
3118 TCCATTCTTTTCAAAAGTAAGAACCAAAAATACATTCCCTTCTTTAGAATACCA-GACGTTGATG
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATA-CATGACATTGATG
* * * **
3182 CTTTTGTGTCACAAGAGTAG--TTTCTTTTCCACTATTATTGATAGAATCAAAGTTTGTCTCTTA
65 CTTTGGTGTCGCAAGAGAAGCTTTTC-TTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTA
* * *
3245 AATAAGAC-AACACGAATACTCATACTAATCCCCATT-TTTTTTAGGATAAGGCACCATAAACAT
129 AATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCT-GGATTAGGCACCATAAACAT
* * * **
3308 AGTCTCCTCATAAGGATACAAGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACTG
193 AGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCCACCA
* * * * ** *
3373 ATTTTTGTAAAGTATGAGTTTCATTTCTCAAATGAGACCAAACATGGATTCTTGTAAGGATCTTC
258 ATTTTTGTAAATTCTAAG-TTCGTGCCTCAAATGAGA-CAAACATGGATTCTAGTAAGGATCTTC
* * *
3438 ATTCATTTCATGATTAGGCAATA-AAACACATTCTCCTTATTAGGATAAATGAATATTGATGGTT
321 ATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG-ATATTGATGGTT
3502 TTCTTTTGCATTG-AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAAT
385 TTCTTTTGCA-TGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAAT
* *
3566 GAGACATGCATTGATTTTCATAAAAGTC
449 GAGACATGCATTGATTCTCGTAAAAGTC
* * *
3594 TCTATTCTTTCCAAGATTAGGGACCATTCTTTCCAGATTGGGAACCAATGACACATTCCATTCAT
1 TCCATTCTTTTCAAGATT-GGGA--A------CC--------AA--AA--ACACATTCCCTTCAT
* * * ** *
3659 TAGGATACATGACATTGATGCTTTGGTGCCACAAGAGAAGCTTTTCTTTCCACCATTACAGATAA
45 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAG
* * * *
3724 AATCAAAGTTTGTCTCTTAAATAAGACAAACACTAAATACTGATACTAGT-CCCATTCTTTTCAG
110 AATCAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATACTCATACTAATCCCCATTCTTTTCTG
* * * * * *
3788 GATTAGGAAACCATAAACATAGTTTTCTCATAAGGATACAGGATATTTATG-ATTGGTTTCACAA
174 GATTAGG-CACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * **
3852 GAACAC-TTTTTTTCCCACCAATTTTTTTAAA-TCTAAGTTTATGCCTCAAATGAGACAAACATG
238 GAA-ACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATG
* * *
3915 GATTCTAGTAAGGATCTTCATTTCATTTCTTGATTAGGGACTATACACACATTCTCCTCATTAGG
302 GATTCTAGTAAGGATCTTCA-TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* * * * *
3980 ATAAATAATATTGATGGTTTTCTTTTGCATGGAAATATTTTCTTTACCTTATTTTCCTTAAAATG
366 ATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATC
* * *
4045 AAAGTTTGTACTTTGAATGACATATGCATTGATTCTCGTAAAAAGTC
431 AAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGT-AAAAGTC
* * *
4092 TCCATTCTTTCCAAAATTAGGAA-CAAAAACACATTCCCTTCATTAGGATACATGA-ATTGATGC
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
* * * * * * * * * *
4155 TTTGGTGTCGCAAGAGAAGCCTTTCTTCCCACCATTATTAAAAAAATTAACGTTTGTCTATGAAA
66 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAA
* * * ** * *
4220 GAAGACAAACATTAATATTCATACTAATCCCCATTCTTTTCAAGATCA-CCACCATAAACATAGT
131 TAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATAGT
* * * * * * *
4284 AC-TCTCATAAGGACACAGGATATTGAT-CATTTGGTTTCGTATGAAATGCTTTTTTTCCCTCAA
196 -CTTCTCATAAGGATACATGATATTGATGC-TTTGGTTTCGCAAGAAACGC-TTTTTTCCCACCA
* * * *
4347 ATTTTTGAAAATTCTAAGTTCGTACCTCCAAATAAGACAAACATAGATTCTAGTAAGGATCTTCA
258 ATTTTTGTAAATTCTAAGTTCGTGCCT-CAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
* *
4412 TTCATTTCATGATTAGGCACTATAAGCACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
322 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
* * *
4477 CTTTTGCATGGAAATC-TTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTAATTTAAATGAG
387 CTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
* *
4541 ACATGCATTGATTATTGTAAAAGTC
452 ACATGCATTGATTCTCGTAAAAGTC
* * * *
4566 TCCATTCTTTCCAAGAGTGGGAACTAAAAACACATTCCCTTCTTTAGGATAACATGACATTGATG
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGAT-ACATGACATTGATG
** * * *
4631 CTTTGGTGTCATAAGAGAAGCTTTTCTTTCCACCATTAATGATAAAATCAAAG-TT-TCTCTTAA
65 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAA
** * *** *
4694 AT-AGACAAACATGGGTACTAATACTAATCTAAATTCTTTTCTAGATTAGGCACCATAAACATAG
130 ATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATAG
* * *
4758 TCTTTCTCATAAGGATACAAGATATTGATGCGTTGGTTTCGCAAGAAACGTTTTTCTTCCCACCA
195 TC-TTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTT-TTCCCACCA
* * * * * *
4823 AGTTTTGTAAAGTATAACTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCAT
258 ATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCAT
*
4888 TCATTTCGTGATTAGTCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGG-----
323 TCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTC
* * * *
4948 --TT---T-----TCTTTTCTTTGCCTCATTTTCCTTAAAAGCAAAGTTTGCACTTTAAATTAGA
388 TTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGA
5003 CATGCATTGATTCTCGTAAAAGTC
453 CATGCATTGATTCTCGTAAAAGTC
* * * *
5027 TCCATTCTTTCCAAGATTGGGAACTAGAAACACATTCCCTTCATTAGGATACATGACTTTGATGC
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
* * ** * * *
5092 TTTGGCGTCGCAAGAGAAGTTTTTCTTTCCATAGTTAATGATAAAATCAATG-TT-TCTC-T-AA
66 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAA
* * * *** * *
5153 TAAGACAAACATGGATAGTCATACAAATCTAAATTCTTTTGTGGATTA-CCACCATAAACATAGT
131 TAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATAGT
* * * * *
5217 CTTCTCATAAGGATAACAGGATATTCATGATTTTGTTTCGCAAGAAATTGCTTTTTTCCCACCAA
196 CTTCTCATAAGGAT-ACATGATATTGATGCTTTGGTTTCGCAAGAAA-CGCTTTTTTCCCACCAA
* * ** * *
5282 TTTTTGTAAAGTATAAGTTCG-GTCCTCAAATGAGACAAACACAGATTTTAGT-AGCGATCTTCT
259 TTTTTGTAAATTCTAAGTTCGTG-CCTCAAATGAGACAAACATGGATTCTAGTAAG-GATCTTCA
5345 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
322 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
* * *
5410 C-TTTGCATGGAAATCTTTTCTTTGCCTTACTTTCCTTAAAATCAAAGTTTGTACTTTGAATGAG
387 CTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
5474 ACATGCATTGATTCTCGTAAAAGTC
452 ACATGCATTGATTCTCGTAAAAGTC
* * * * *
5499 TCCATTCTTTCCAAAATTAGAAACCAAAAACAC-TTCCCCTTCATTAGGATACCAAGACATTGAT
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATT-CCCTTCATTAGGATA-CATGACATTGAT
* * * * *
5563 GCTTTGGTGTCGC-A-AG-A---------T-----GCTATTCATACAATCAAAGTTTGCCTTTTA
64 GCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTA
* * *
5611 AAAAAGACAAACCTGAATACTCATACTAATCCCCATTCTTTTTTGGATTAGGCACCATAAACATA
129 AATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATA
* * * * * *
5676 GTCTTCTTATATGGA-ACAGGATATTGATGATTTGGTTTCGCAAG-AACGTTTTTTTTTCCCA-T
194 GTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACG--CTTTTTTCCCACC
* * *
5738 AATTTTTGTAAATTCTAAGTTCGTGCCTTAAATGAGACTAACATGGATTTCTAGTAACGATCTTC
257 AATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA-TTCTAGTAAGGATCTTC
* * *
5803 ATTCACTTT-GTGATTAGGCACTATAAACATATTTTCCTCATTAGGATAAATGATTTTGATGGTT
321 ATTCA-TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTT
* * *
5867 TTCTTTTTCATGGAAATCTTTTCTTTGCCTTA-TTTCCTTAAAATCAAACTTTGTACTTTAAATG
385 TTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
5931 AGACATGCATTGATTCTCGTAAAAGTC
450 AGACATGCATTGATTCTCGTAAAAGTC
* * *
5958 TCCATTCATTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATTCATGGC-TTGATGC
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
* ** * *
6022 TTTGGTGTCGCAAGAGAAGCTGTTCTCCCCACCGTTATTGATAGAAGCAAAGTTTGTCGCTTAAA
66 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAA
* * *
6087 TAAGACAAACATGAATAGTCATACTAATCCACGTTCTTTTCTGGATTAGGCACCATAAACATAGT
131 TAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATAGT
* * * * *
6152 CTTCTCATAAGGATACATGGTATTGATGCTTTGTTTTCGTAAGAAATGCTTTCTTCCCACCAATT
196 CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATT
* * * * * * *
6217 TTTGAAAAGTGTAAGTTCATTCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCATCATTCA
261 TTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
* * * * * * *
6282 TTTCATGACTAGGCACTTTGAACACATTCTCCCCAATAGGATAAATGATATTGATAGTTTTCTTT
326 TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
* * * *
6347 TGCCTGAAAATCTTTTCTTTGCCTCACTTTCTTTAAAATCAAAGTTTTGTACTTTAAATGAGACA
391 TGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAG-TTTGTACTTTAAATGAGACA
* *
6412 AGCATTGATTCTTGTAAAAGGTC
455 TGCATTGATTCTCGTAAAA-GTC
* * *
6435 TCCATTCTTTCCATGATTGGGAACTAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
* * * * * *
6500 TTTGGTGTGGCAAGAGAAGCTTTTCTTTCCAACATTATTGATAAAATCAAAGTTTCTCTCTGAAA
66 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAA
* ** * * *
6565 AAAGACAAATGTGAATACTCATACTAATTCCCATTC-TTTCAGGACTAGGCACCATAAACATAGT
131 TAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATAGT
* * * * * * * *
6629 CTTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCTAGAAATGCCTTTTTCCCA-TAATT
196 CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATT
* * * * *
6693 TTTG-AAGATTCTATGTTCATGGCTCAAATGAGACAAACATGGATTCTAGAAAGGATCTTCTTTC
261 TTTGTAA-ATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTC
* **
6757 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCATCAGGATGCATGATATTGATGGTTTTCTT
325 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTT
*
6822 TTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTTGTACTTTAAATGAGACA
390 TTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACA
*
6887 TGCATTGATTCTCGCAAAAGTC
455 TGCATTGATTCTCGTAAAAGTC
* * *
6909 TCTATTCTTTTTAAGATTGGGAACCAAAAACACATTCCCATCATTAGGATACATGACATTGATGC
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
* * *
6974 TTTGGTGTTGC-----AAG-----------A-CGTTATTCATA-AATCAAAGTTTGTCTTTTAAA
66 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAA
* * * *
7021 TAAGACAAACTTGAATACTCATACTAATCCCCATTCCTTTCTGGATTAGGCACCCTAAACATACT
131 TAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATAGT
* * * * *
7086 CTTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTTCCCA-TAAT
196 CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGC-TTTTTTCCCACCAAT
* * *
7150 TTTTGTAAATTCTAAGTTCGTGCCTCAAATGTGACACACATGGATTCTAGTAAGGATCGTCATTC
260 TTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTC
*
7215 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGAAATTGATGGTTTTCTT
325 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTT
* * * *
7280 CTGCAT-AGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTCTACTTTAATTGAGAC
390 TTGCATGA-AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAC
7344 ATGCATTGATTCTCGTAAAAGTC
454 ATGCATTGATTCTCGTAAAAGTC
* * * * * * * *
7367 TCAATTC-TTTCTAATATTGGGATCCAAGAACACATTCCCTTTATTACGATACATGACAATAATG
1 TCCATTCTTTTC-AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
* * ** * * *
7431 CTTTGGTGCCACAAGAGAATATTTTCTTTCCACTGTTATTGATAGAATCAAAGTTTGTGTTTTAA
65 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAA
* * *
7496 ATAAGACAAACATGAATACTCATACTAATCCACATTCTTGTCTGGATTAGGCACCGTAAACATAG
130 ATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATAG
* * * * *
7561 GCTTCTAATAAGGATACATGATGTTGATGCTTTGGTTTCGCCAGAAACGCTTTCTT-CCACCCAA
195 TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCCA-CCAA
** * * * *
7625 TTTTCCTAAATTCTAATTTCGCGCCTCAAATGAGACAAACATGGATTTTAGTAAGGATTTTCATT
259 TTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
* * * *
7690 CATTTCATGATTAGGCACTATAAA-ACATTCTCCACATTAGGATAAATGATACTGATGCTTTTTT
324 CATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATG----GTT
* * *
7754 TTTTTTTGCAAGAAAATCTTTTCTATGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
385 TTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
* *
7819 AGACATGCATTGATTCTCATAAAAGTT
450 AGACATGCATTGATTCTCGTAAAAGTC
* *
7846 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTAATTAGGATACATGACATTGATGC
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
* * * * **
7911 TTTAGG-GCCGCAAGAAAAGGTTTTC-TTCCTACCGTTACTGATAGAATCGCAG-TTGTCTCTTA
66 TTT-GGTGTCGCAAGAGAAGCTTTTCTTTCC-ACCGTTATTGATAGAATCAAAGTTTGTCTCTTA
* * *
7973 AATAAGACAAACTTGAATACTCACACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
129 AATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATA
* * * * * ** * *
8038 ATCTTCTCATCAGGATACATGATATTGATGCTTTGGTTTCACAAGATATGCTTTCATCCCGCCTA
194 GTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAA
* * * * * * *
8103 TTTTTGCAAAGTATAAGTTCATTCCTCAAATTAGACAAACATGGATTCTAGTAAGGATCTTCGTT
259 TTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
* *
8168 CATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTTT
324 CATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGG-TTTTC
** *
8233 TTTTGCATGAAAATCTTCTT-TTTGCCTCGTTTTCCTTAAAATCAAAGTTTGTACTTTAATTGAG
388 TTTTGCATGAAAATCTT-TTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
*
8297 ACATGCATTGATTCTCATAAAAGTC
452 ACATGCATTGATTCTCGTAAAAGTC
* * *
8322 TCCATTC-TTTCTAATATTGGGAACCAAGAACACATTCCCTTTATTAGGATACATGACATTGATG
1 TCCATTCTTTTC-AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
* * *
8386 CTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGTTTGTCTCTTAA
65 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAA
* * *
8451 ATAAGAAAAACAT--A-A---ATAC---T---CATTCTTTTCTAGATTAGGCACCATAAACTTAG
130 ATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATAG
* * * *
8504 TCTTCTAATAAGGATACATGATATTGATGCTTTGG-TTCTACAAGAAACACTTTCTTCCTC-CCA
195 TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTC-GCAAGAAACGCTTTTTTCC-CACCA
* * * * * * * *
8567 ATTTTTGTAAACTCTAAGTTCGTGTCTTAAATGAGACAAGCATTGATTGTAGTAAGGATCTTTAC
258 ATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCAT
* * **
8632 TCATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATGCATGATATTGATGGTTTTC
323 TCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTC
* *
8697 TTTTGCAT-AGAAATCTTTTCTTCGCCTTATTTTCCCTAAAATCAAAGTTTGTACTTTAAATGCA
388 TTTTGCATGA-AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG-A
8761 -ACATGCATTGATTCTCGTAAAAGTC
451 GACATGCATTGATTCTCGTAAAAGTC
* * *
8786 TCCATTCTTTTCAAGATTGGGAACCCAAAACACATTTCCTTCATTAAGATA
1 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATA
8837 GTGTTCATTG
Statistics
Matches: 6091, Mismatches: 842, Indels: 439
0.83 0.11 0.06
Matches are distributed among these distances:
456 64 0.01
457 120 0.02
458 482 0.08
459 260 0.04
460 141 0.02
461 141 0.02
463 5 0.00
464 125 0.02
465 191 0.03
466 1 0.00
467 1 0.00
468 3 0.00
469 3 0.00
470 1 0.00
471 91 0.01
472 252 0.04
473 181 0.03
474 526 0.09
475 824 0.14
476 1037 0.17
477 533 0.09
478 330 0.05
479 215 0.04
480 116 0.02
481 36 0.01
485 2 0.00
488 1 0.00
493 2 0.00
495 3 0.00
496 31 0.01
497 167 0.03
498 94 0.02
499 55 0.01
500 57 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (476 bp):
TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAA
TAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAACATAGT
CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATT
TTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
TGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAT
GCATTGATTCTCGTAAAAGTC
Found at i:3640 original size:21 final size:22
Alignment explanation
Indices: 3597--3636 Score: 66
Period size: 22 Copynumber: 1.9 Consensus size: 22
3587 AAAAGTCTCT
3597 ATTCTTTCCAAGATTAGGGACC
1 ATTCTTTCCAAGATTAGGGACC
3619 ATTCTTTCC-AGATT-GGGA
1 ATTCTTTCCAAGATTAGGGA
3637 ACCAATGACA
Statistics
Matches: 18, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
20 4 0.22
21 5 0.28
22 9 0.50
ACGTcount: A:0.25, C:0.20, G:0.20, T:0.35
Consensus pattern (22 bp):
ATTCTTTCCAAGATTAGGGACC
Found at i:9075 original size:255 final size:255
Alignment explanation
Indices: 8611--9091 Score: 727
Period size: 255 Copynumber: 1.9 Consensus size: 255
8601 GACAAGCATT
* *
8611 GATTGTAGTAAGGATCTTTACTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGA
1 GATTCTAGTAAGGATCCTTACTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGA
** * *
8676 TGCATGATATTGATGGTTTTCTTTTGCATAGAAATCTTTTCTTCGCCTTATTTTCCCTAAAATCA
66 TAAATGATATTGATGGTTTTCTTTTGCATAGAAATCTTTTCTTCGACTTATTTTCCCTAAAATAA
* *
8741 AAGTTTGTACTTTAAATGCAACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGG
131 AAGTGTGTACTTTAAATGCAACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGG
8806 GAACCCAAAACACATTTCCTTC-ATTAAGATAGTGTTCATTGCTCAAATGCGGCAAACATG
196 GAACCCAAAACACA-TTCCTTCTATTAAGATAGTGTTCATTGCTCAAATGCGGCAAACATG
* ** * *
8866 GATTCTAGTAAGGATCCTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCTTCATTAGGA
1 GATTCTAGTAAGGATCCTTACTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGA
* * * *
8931 TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGACTTGTTTTCCTTAAAATAA
66 TAAATGATATTGATGGTTTTCTTTTGCATAGAAATCTTTTCTTCGACTTATTTTCCCTAAAATAA
*
8996 AAGTGTGTACTTTAAATG-AGACATGCATTGATTCTCATAAAAGTCTCCATTC-TTTCTAATATT
131 AAGTGTGTACTTTAAATGCA-ACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTC-AAGATT
*
9059 GGGAA-CCAAGAACACATTCCTTCTATTAGGATA
194 GGGAACCCAA-AACACATTCCTTCTATTAAGATA
9092 CATGACATTG
Statistics
Matches: 203, Mismatches: 19, Indels: 8
0.88 0.08 0.03
Matches are distributed among these distances:
254 16 0.08
255 187 0.92
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.38
Consensus pattern (255 bp):
GATTCTAGTAAGGATCCTTACTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGA
TAAATGATATTGATGGTTTTCTTTTGCATAGAAATCTTTTCTTCGACTTATTTTCCCTAAAATAA
AAGTGTGTACTTTAAATGCAACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGG
GAACCCAAAACACATTCCTTCTATTAAGATAGTGTTCATTGCTCAAATGCGGCAAACATG
Found at i:9509 original size:731 final size:720
Alignment explanation
Indices: 8119--9564 Score: 2266
Period size: 731 Copynumber: 2.0 Consensus size: 720
8109 CAAAGTATAA
* *
8119 GTTCATTCCTCAAATTAGACAAACATGGATTCTAGTAAGGATCTTCGTTCATTTTGTGATTAGGC
1 GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTTGTGATTAGGC
*
8184 ACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTTTTTTTGCATGAAAATCT
66 ACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTTCTTTTGCATGAAAATCT
* * * *
8249 TCTTTTTGCCTCGTTTTCCTTAAAATCAAAGTTTGTACTTTAATTGAGACATGCATTGATTCTCA
131 TCTTTTTGACTCGTTTTCCTTAAAATAAAAGTGTGTACTTTAAATGAGACATGCATTGATTCTCA
8314 TAAAAGTCTCCATTCTTTCTAATATTGGGAACCAAGAACACATTCCCTTTATTAGGATACATGAC
196 TAAAAGTCTCCATTCTTTCTAATATTGGGAACCAAGAACACATTCCCTTTATTAGGATACATGAC
8379 ATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGTTTGT
261 ATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGTTTGT
*
8444 CTCTTAAATAAGAAAAACATAAATACTCATTCTTTTCTAGATTAGGCACCATAAACTTAGTCTTC
326 CTCTTAAATAAGAAAAACATAAATACTCATTCTTTTCTAGATTAGGCACCATAAACTGAGTCTTC
8509 TAATAAGGATACATGATATTGATGCTTTGGTTCTACAAGAAACACTTTCTTCCTCCCAATTTTTG
391 TAATAAGGATACATGATATTGATGCTTTGGTTCTACAAGAAACACTTTCTTCCTCCCAATTTTTG
* * * * *
8574 TAAACTCTAAGTTCGTGTCTTAAATGAGACAAGCATTGATTGTAGTAAGGATCTTTACTCATTTC
456 TAAACTCTAAGTTCGTGCCTCAAACGAGACAAGCATTGATTCTAGTAAGGATCTTCACTCATTTC
**
8639 ATGATTAGGCACTATAAACACATTCTCCTCATCAGGATGCATGATATTGATGGTTTTCTTTTGCA
521 ATGATTAGGCACTATAAACACATTCTCCTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCA
* *
8704 TAGAAATCTTTTCTTCGCCTTATTTTCCCTAAAATCAAAGTTTGTACTTTAAATGCAACATGCAT
586 TAGAAATCTTTTCTTCACCTTATTTTCCCTAAAATCAAAGTTTATACTTTAAATGCAACATGCAT
* *
8769 TGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCCAAAACACATTTCCTTCATTAAG
651 TGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAAG
8834 ATAGT
716 ATAGT
* * *
8839 GTTCATTGCTCAAATGCGGCAAACATGGATTCTAGTAAGGATCCTT-ATTCATTTTGTGATTAGG
1 GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGAT-CTTCATTCATTTTGTGATTAGG
* *
8903 CACTATAAACACATTCTCTTCATTAGGATAAATGATATTGATGG-TTTTCTTTTGCATGGAAATC
65 CACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTTCTTTTGCATGAAAATC
*
8967 TT-TTCTTTGACTTGTTTTCCTTAAAATAAAAGTGTGTACTTTAAATGAGACATGCATTGATTCT
130 TTCTT-TTTGACTCGTTTTCCTTAAAATAAAAGTGTGTACTTTAAATGAGACATGCATTGATTCT
9031 CATAAAAGTCTCCATTCTTTCTAATATTGGGAACCAAGAACACATT-CCTTCTATTAGGATACAT
194 CATAAAAGTCTCCATTCTTTCTAATATTGGGAACCAAGAACACATTCCCTT-TATTAGGATACAT
*
9095 GACATTGATGCTTTGGTGTCACACA-AGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
258 GACATTGATGCTTTGGTGTCACA-AGAAAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* *
9159 TTGTCTCTTAAATAAGAAAAATATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCAC
322 TTGTCTCTTAAATAAGAAAAACAT--A-A---ATAC---T---CATTCTTTTCTAGATTAGGCAC
*
9224 CATAAA-TAGAGTCTTCTAATAAGGATACATGATATTGATGCTTTGGTT-TCGCAAGAAACACTT
375 CATAAACT-GAGTCTTCTAATAAGGATACATGATATTGATGCTTTGGTTCT-ACAAGAAACACTT
* * *
9287 TTTTCC-CACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAACGAGACAAGCA-TGAATTCTTG
438 TCTTCCTC-CCAATTTTTGTAAACTCTAAGTTCGTGCCTCAAACGAGACAAGCATTG-ATTCTAG
* * *
9350 TAAGGATCTTCATTCATTTCATGATTCA-GCACTATAAACACATTCTCCTTATTAGGATAAATGA
501 TAAGGATCTTCACTCATTTCATGATT-AGGCACTATAAACACATTCTCCTCATCAGGATAAATGA
* * *
9414 TATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTTA
565 TATTGATGGTTTTCTTTTGCATAGAAATCTTTTCTTCACCTTATTTTCCCTAAAATCAAAGTTTA
*
9479 TGCTTTAAATG-AGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCA
630 TACTTTAAATGCA-ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCA
9543 AAAACACATTCCCTTCATTAAG
694 AAAACACATTCCCTTCATTAAG
9565 GTACATGACA
Statistics
Matches: 665, Mismatches: 39, Indels: 33
0.90 0.05 0.04
Matches are distributed among these distances:
718 6 0.01
719 217 0.33
720 99 0.15
721 4 0.01
722 1 0.00
725 4 0.01
728 1 0.00
730 6 0.01
731 326 0.49
732 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (720 bp):
GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTTGTGATTAGGC
ACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTTCTTTTGCATGAAAATCT
TCTTTTTGACTCGTTTTCCTTAAAATAAAAGTGTGTACTTTAAATGAGACATGCATTGATTCTCA
TAAAAGTCTCCATTCTTTCTAATATTGGGAACCAAGAACACATTCCCTTTATTAGGATACATGAC
ATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGTTTGT
CTCTTAAATAAGAAAAACATAAATACTCATTCTTTTCTAGATTAGGCACCATAAACTGAGTCTTC
TAATAAGGATACATGATATTGATGCTTTGGTTCTACAAGAAACACTTTCTTCCTCCCAATTTTTG
TAAACTCTAAGTTCGTGCCTCAAACGAGACAAGCATTGATTCTAGTAAGGATCTTCACTCATTTC
ATGATTAGGCACTATAAACACATTCTCCTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCA
TAGAAATCTTTTCTTCACCTTATTTTCCCTAAAATCAAAGTTTATACTTTAAATGCAACATGCAT
TGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAAG
ATAGT
Found at i:9548 original size:159 final size:158
Alignment explanation
Indices: 8909--9585 Score: 400
Period size: 159 Copynumber: 4.3 Consensus size: 158
8899 TAGGCACTAT
* * *
8909 AAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
1 AAACACATTCTCCTT-ATTAGGATAAATGATATTGATGCTTTGCTTTCGCA-GGAAATCTTTTCT
* * * * * *
8973 TTGACTTGTTTTCCTTAAAATAAAAGTGTGTACTTTAAATGAGACATGCATTG-ATTCTCATAAA
64 TTCACCTATTTT-CTTAAAATCAAAGTTTGTGCTTTAAATGAGACATGCATTGAATTCTCATAAA
*
9037 AGTCTCCATTC-TTTCTAATATTGGGAACCAA
128 AGTCTCCATTCTTTTC-AAGATTGGGAACCAA
* * * * * * * ** *
9068 GAACACATTC-CTTCTATTAGGATACATGACATTGATGCTTTGGTGTCACACAAGAAGCTTTTCT
1 AAACACATTCTCCT-TATTAGGATAAATGATATTGATGCTTTGCTTTCGCAGGA-AATCTTTTCT
** * * ** *
9132 TTCCACC-ATTATTGATAGAATCAAAGTTTGT-CTCTTAAATAAGA-A-AAATATGAATACTCAT
64 TT-CACCTATT-TTCTTAAAATCAAAGTTTGTGCT-TTAAATGAGACATGCAT-TGAATTCTCAT
* ** * * *
9193 ACTAA-TC-CACATTCTTTTCTGGATTAGGCACCAT
125 A-AAAGTCTC-CATTCTTTTCAAGATTGGGAACCAA
* * * * * * * * * *
9227 AAATAGAGTCTTCTAATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACACTTTT-TT
1 AAACACATTCTCCTTATTAGGATAAATGATATTGATGCTTTGCTTTCGCAGGAAA-TCTTTTCTT
* * * * * * * * * **
9291 CCCACCAATTTT-TGTAAATTCTAAGTTCGTGCCTCAAACGAGACAAGCA-TGAATTCTTGT-AA
65 -TCACCTATTTTCT-TAAAATCAAAGTTTGTGCTTTAAATGAGACATGCATTGAATTCTCATAAA
* * * * ** * * *
9353 GGATCTTCATTCATTTCATGATTCAGCACTAT
128 AG-TCTCCATTCTTTTCAAGATTGGGAACCAA
* * *
9385 AAACACATTCTCCTTATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
1 AAACACATTCTCCTTATTAGGATAAATGATATTGATGCTTTGCTTTCGCA-GGAAATCTTTTCTT
* *
9450 T-ACCTTATTTTCCTTAAAATCAAAGTTTATGCTTTAAATGAGACATGCATTG-ATTCTCGTAAA
65 TCACC-TATTTT-CTTAAAATCAAAGTTTGTGCTTTAAATGAGACATGCATTGAATTCTCATAAA
9513 AGTCTCCATTCTTTTCAAGATTGGGAACCAA
128 AGTCTCCATTCTTTTCAAGATTGGGAACCAA
* * *
9544 AAACACATTC-CCTTCATTAAGG-TACATGACATTGGTGCTTTG
1 AAACACATTCTCCTT-ATT-AGGATAAATGATATTGATGCTTTG
9586 GTGTCACAAG
Statistics
Matches: 379, Mismatches: 108, Indels: 62
0.69 0.20 0.11
Matches are distributed among these distances:
156 1 0.00
157 5 0.01
158 118 0.31
159 233 0.61
160 22 0.06
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (158 bp):
AAACACATTCTCCTTATTAGGATAAATGATATTGATGCTTTGCTTTCGCAGGAAATCTTTTCTTT
CACCTATTTTCTTAAAATCAAAGTTTGTGCTTTAAATGAGACATGCATTGAATTCTCATAAAAGT
CTCCATTCTTTTCAAGATTGGGAACCAA
Found at i:17699 original size:33 final size:34
Alignment explanation
Indices: 17651--17719 Score: 97
Period size: 33 Copynumber: 2.1 Consensus size: 34
17641 AGTGGCATCA
17651 TTTTCTTCCAAGTCCATGACTAAGTAGC-ATCTC
1 TTTTCTTCCAAGTCCATGACTAAGTAGCAATCTC
* *
17684 TTTTCTT-CAATGTCCATGACTTAGTGGCAATCTC
1 TTTTCTTCCAA-GTCCATGACTAAGTAGCAATCTC
17718 TT
1 TT
17720 CTCAAAGTCT
Statistics
Matches: 32, Mismatches: 2, Indels: 3
0.86 0.05 0.08
Matches are distributed among these distances:
32 3 0.09
33 22 0.69
34 7 0.22
ACGTcount: A:0.22, C:0.25, G:0.13, T:0.41
Consensus pattern (34 bp):
TTTTCTTCCAAGTCCATGACTAAGTAGCAATCTC
Found at i:17758 original size:30 final size:30
Alignment explanation
Indices: 17622--18024 Score: 283
Period size: 30 Copynumber: 13.2 Consensus size: 30
17612 CAAATCTCTC
* * * *
17622 TTTTCCAAGTACACAACTTAGTGGCATCATT
1 TTTTCAAAGTCCACGACTCAGTGGCATC-TT
* * * *
17653 TTCTTCCAAGTCCATGACTAAGTAGCATCTCTT
1 TT-TTCAAAGTCCACGACTCAGTGGCA--TCTT
* * * *
17686 TTCTTCAATGTCCATGACTTAGTGGCAATCTC
1 TT-TTCAAAGTCCACGACTCAGTGGC-ATCTT
* * * *
17718 TTCTCAAAGTCTACAACTCAGTGGTATCTT
1 TTTTCAAAGTCCACGACTCAGTGGCATCTT
*
17748 TTTTCTAAGTCCACGACTCAGTGGCATCTT
1 TTTTCAAAGTCCACGACTCAGTGGCATCTT
* * * *
17778 TTCTTCAACGTCAACGACTTAGTGGCAATCTC
1 TT-TTCAAAGTCCACGACTCAGTGGC-ATCTT
* * * *
17810 TTCTCAAAGTCCACAACTCAATGGCATCTC
1 TTTTCAAAGTCCACGACTCAGTGGCATCTT
* * *
17840 TTGTCAAAGTCCACAACTCAGTGGCATCTC
1 TTTTCAAAGTCCACGACTCAGTGGCATCTT
* * *
17870 TTTTCTAAGTCTACGACTCAATGGCATCCTT
1 TTTTCAAAGTCCACGACTCAGTGGCAT-CTT
** *
17901 TTCTTCCTAGTCCATGACTCAGTGGCATCTT
1 TT-TTCAAAGTCCACGACTCAGTGGCATCTT
* * * *
17932 TTCTCCAAAATCCACGACTCAGTGGTATCTC
1 TT-TTCAAAGTCCACGACTCAGTGGCATCTT
* *
17963 TTCTCAAAGTCCATGACTCAGTGGCAT-TT
1 TTTTCAAAGTCCACGACTCAGTGGCATCTT
* * *
17992 CTTTT--AAGTCCACAACTCCGTGGCA-GTT
1 -TTTTCAAAGTCCACGACTCAGTGGCATCTT
18020 TTTTC
1 TTTTC
18025 TTTTTAAAGC
Statistics
Matches: 297, Mismatches: 64, Indels: 25
0.77 0.17 0.06
Matches are distributed among these distances:
27 4 0.01
28 19 0.06
29 1 0.00
30 109 0.37
31 87 0.29
32 50 0.17
33 24 0.08
34 3 0.01
ACGTcount: A:0.24, C:0.27, G:0.14, T:0.34
Consensus pattern (30 bp):
TTTTCAAAGTCCACGACTCAGTGGCATCTT
Found at i:17797 original size:92 final size:92
Alignment explanation
Indices: 17618--18024 Score: 335
Period size: 92 Copynumber: 4.4 Consensus size: 92
17608 GCTTCAAATC
* * * * * * * *
17618 TCTCTTTTCCAAGTACACAACTTAGTGGCATCATTTTCTTCCAAGTCCATGACTAAGTAGCATCT
1 TCTCTTCTCAAAGTCCACAACTCAGTGGCATC-TTTT-TTCAAAGTCCACGACTCAGTGGCA--T
* * *
17683 CTTTTCTTCAATGTCCATGACTTAGTGGCAA
62 CTTTTCTTCAACGTCAACGACTTAGTGGCAA
* * *
17714 TCTCTTCTCAAAGTCTACAACTCAGTGGTATCTTTTTTCTAAGTCCACGACTCAGTGGCATCTTT
1 TCTCTTCTCAAAGTCCACAACTCAGTGGCATCTTTTTTCAAAGTCCACGACTCAGTGGCATCTTT
17779 TCTTCAACGTCAACGACTTAGTGGCAA
66 TCTTCAACGTCAACGACTTAGTGGCAA
* * * * *
17806 TCTCTTCTCAAAGTCCACAACTCAATGGCATCTCTTGTCAAAGTCCACAACTCAGTGGCATCTCT
1 TCTCTTCTCAAAGTCCACAACTCAGTGGCATCTTTTTTCAAAGTCCACGACTCAGTGGCATCTTT
* * *
17871 T-TTCTAA-GTCTACGACTCAATGGC-A
66 TCTTC-AACGTCAACGACTTAGTGGCAA
* ** ** * * *
17896 TCCTTTTCTTCCTAGTCCATGACTCAGTGGCATCTTTTCTCCAAAATCCACGACTCAGTGGTATC
1 T-CTCTTC-TCAAAGTCCACAACTCAGTGGCATCTTTT-TTCAAAGTCCACGACTCAGTGGCATC
* * * * *
17961 TCTTC-TCAAAGTCCATGACTCAGTGGC-A
63 TTTTCTTCAACGTCAACGACTTAGTGGCAA
* * * *
17989 TTTCTT-T-TAAGTCCACAACTCCGTGGCA-GTTTTTTC
1 TCTCTTCTCAAAGTCCACAACTCAGTGGCATCTTTTTTC
18025 TTTTTAAAGC
Statistics
Matches: 257, Mismatches: 48, Indels: 21
0.79 0.15 0.06
Matches are distributed among these distances:
87 2 0.01
88 4 0.02
89 16 0.06
90 3 0.01
91 22 0.09
92 117 0.46
93 43 0.17
94 20 0.08
95 4 0.02
96 26 0.10
ACGTcount: A:0.24, C:0.28, G:0.14, T:0.35
Consensus pattern (92 bp):
TCTCTTCTCAAAGTCCACAACTCAGTGGCATCTTTTTTCAAAGTCCACGACTCAGTGGCATCTTT
TCTTCAACGTCAACGACTTAGTGGCAA
Found at i:17975 original size:123 final size:122
Alignment explanation
Indices: 17618--18009 Score: 414
Period size: 123 Copynumber: 3.2 Consensus size: 122
17608 GCTTCAAATC
* * * * * * *
17618 TCTCTTTTCCAAGTACACAACTTAGTGGCATCATTTTCTTCCAAGTCCATGACTAAGTAGCATCT
1 TCTCTTTTCTAAGTCCACGACTCAATGGCATCCTTTTCTTCCAAGTCCATGACTAAGTGGCA--T
* * * * *
17683 CTTTTCTTCAATGTCCATGACTTAGTGGCAATCTCTTCTCAAAGTCTACAACTCAGTGGTA
64 CTTTTC-TCAAAGTCCACGACTCAGTGG-AATCTCTTCTCAAAGTCCACAACTCAGTGGCA
* * * * *
17744 TCTTTTTTCTAAGTCCACGACTCAGTGGCAT-CTTTTCTT-CAACGTCAACGACTTAGTGGCAAT
1 TCTCTTTTCTAAGTCCACGACTCAATGGCATCCTTTTCTTCCAA-GTCCATGACTAAGTGGC-AT
* * * * *
17807 CTCTTCTCAAAGTCCACAACTCAATGGCATCTCTTGTCAAAGTCCACAACTCAGTGGCA
64 CTTTTCTCAAAGTCCACGACTCAGTGGAATCTCTTCTCAAAGTCCACAACTCAGTGGCA
* * *
17866 TCTCTTTTCTAAGTCTACGACTCAATGGCATCCTTTTCTTCCTAGTCCATGACTCAGTGGCATCT
1 TCTCTTTTCTAAGTCCACGACTCAATGGCATCCTTTTCTTCCAAGTCCATGACTAAGTGGCATCT
* * **
17931 TTTCTCCAAAATCCACGACTCAGTGGTATCTCTTCTCAAAGTCCATGACTCAGTGGCA
66 TTTCT-CAAAGTCCACGACTCAGTGGAATCTCTTCTCAAAGTCCACAACTCAGTGGCA
* *
17989 TTTC-TTT-TAAGTCCACAACTC
1 TCTCTTTTCTAAGTCCACGACTC
18010 CGTGGCAGTT
Statistics
Matches: 223, Mismatches: 38, Indels: 15
0.81 0.14 0.05
Matches are distributed among these distances:
121 12 0.05
122 67 0.30
123 86 0.39
124 11 0.05
125 20 0.09
126 27 0.12
ACGTcount: A:0.24, C:0.28, G:0.14, T:0.34
Consensus pattern (122 bp):
TCTCTTTTCTAAGTCCACGACTCAATGGCATCCTTTTCTTCCAAGTCCATGACTAAGTGGCATCT
TTTCTCAAAGTCCACGACTCAGTGGAATCTCTTCTCAAAGTCCACAACTCAGTGGCA
Found at i:18042 original size:34 final size:33
Alignment explanation
Indices: 17992--18961 Score: 699
Period size: 34 Copynumber: 29.8 Consensus size: 33
17982 AGTGGCATTT
*
17992 CTTTTAAGTCCACAACTCCGTGGCAGTTTTTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* *
18025 TTTTTAAAGCCCACAACTCCGTGGCACTCTTTTTC
1 CTTTT-AAGTCCACAACTCCGTGGCACT-TTTTTC
*
18060 CTTTTAAGTCCACAACTCTGTGGCAC------C
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* * *
18087 CTTTTAAGTCCATAACTCTGTGGCACCTTTCTCTTTT
1 CTTTTAAGTCCACAACTCCGTGGCA-C-TT-T-TTTC
* * *
18124 TTTTTAAAGCCCACAACTCCGTGGTACTCTTTTTC
1 CTTTT-AAGTCCACAACTCCGTGGCACT-TTTTTC
* *
18159 CTTTTAAGTCCACAACTCCGTGGCACCTTCTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
*
18192 CTTTTAAGTCCACAACTCTGTGGCACCTTTCTCTT-
1 CTTTTAAGTCCACAACTCCGTGGCA-CTTT-T-TTC
* * * *
18227 TTTCTTAAAGCCCACAACTCCATGGTACTATTTTTC
1 CTT-TT-AAGTCCACAACTCCGTGGCACT-TTTTTC
* *
18263 CTTTTAAGTCCACAACTCCGTGGCACCTTCTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* *
18296 CTTTTAAGTCCACAATTCCGTGGCACCTTTTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* * *
18329 TTTTTAAAG-CCTGCAACCCCGTGGCACTCTTTTTC
1 CTTTT-AAGTCC-ACAACTCCGTGGCACT-TTTTTC
* *
18364 CTTTTAAGTCCATAACTCCGTTGCAC------C
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
*
18391 CTTTTAAGACCACAACTCCGTGGCAC------C
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
18418 CTTTTAAGTCCACAACTCCGTGGCAC------C
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* * ** *
18445 CTTTTAAGTCCATAACACTATGGCAGTCTTTTTC
1 CTTTTAAGTCCACAACTCCGTGGCACT-TTTTTC
* *
18479 CTTTTAAGTCCACAACTCCGTGGCACCTTGTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* * *
18512 CTTTTAAGTACACAATTCCGTGGCACCTTTTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* * *
18545 TTTTTAAAGCCCATAACTCCGTGGCACTCTTTTTC
1 CTTTT-AAGTCCACAACTCCGTGGCACT-TTTTTC
**
18580 CTTTTAAGTCCACAACTTTGTGGCAC------C
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
** *
18607 CTTTTAAGTCCACAACTCTATGGCACCTTTTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* * * *
18640 TTTTTAAAGCCCACAACACCGTGACACTCTTTTTC
1 CTTTT-AAGTCCACAACTCCGTGGCACT-TTTTTC
* * *
18675 CTTTTAAGTCCACAACTGCGTGGCACCTTGTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* * ** *
18708 ATTTTAAGTCCACAATTTTGTGGCACCTTTTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* *
18741 TTTTTAAAGCCCACAACTCCGTGGCACTTTTTTTC
1 CTTTT-AAGTCCACAACTCCGTGGCAC-TTTTTTC
*
18776 CTTTTAAGTCCACAACTCCATGGCAC------C
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* *
18803 CTTTTAAGTCCACAACTCCGTGGCACCTTGTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* * *
18836 CTTTTAAGTCCATAACTCCGTGCCAC-CTTTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
* * ** * *
18868 TTTTTAAGTCTACAACTTTGTGGCACCCTTTTCC
1 CTTTTAAGTCCACAACTCCGTGGCA-CTTTTTTC
** * * *
18902 CTTTTAAACCCATACCTCCATGGCA-TTCCCTTTTC
1 CTTTTAAGTCCACAACTCCGTGGCACTT---TTTTC
* *
18937 C-TATAAGTCCACAACTCTGTGGCAC
1 CTTTTAAGTCCACAACTCCGTGGCAC
18962 CTTTAAGCCC
Statistics
Matches: 745, Mismatches: 136, Indels: 110
0.75 0.14 0.11
Matches are distributed among these distances:
27 148 0.20
28 1 0.00
32 24 0.03
33 182 0.24
34 269 0.36
35 70 0.09
36 11 0.01
37 24 0.03
38 16 0.02
ACGTcount: A:0.21, C:0.31, G:0.12, T:0.36
Consensus pattern (33 bp):
CTTTTAAGTCCACAACTCCGTGGCACTTTTTTC
Found at i:18090 original size:27 final size:27
Alignment explanation
Indices: 18059--18113 Score: 101
Period size: 27 Copynumber: 2.0 Consensus size: 27
18049 CACTCTTTTT
18059 CCTTTTAAGTCCACAACTCTGTGGCAC
1 CCTTTTAAGTCCACAACTCTGTGGCAC
*
18086 CCTTTTAAGTCCATAACTCTGTGGCAC
1 CCTTTTAAGTCCACAACTCTGTGGCAC
18113 C
1 C
18114 TTTCTCTTTT
Statistics
Matches: 27, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
27 27 1.00
ACGTcount: A:0.22, C:0.33, G:0.15, T:0.31
Consensus pattern (27 bp):
CCTTTTAAGTCCACAACTCTGTGGCAC
Found at i:18393 original size:27 final size:27
Alignment explanation
Indices: 18363--18829 Score: 169
Period size: 27 Copynumber: 15.0 Consensus size: 27
18353 CACTCTTTTT
* *
18363 CCTTTTAAGTCCATAACTCCGTTGCAC
1 CCTTTTAAGTCCACAACTCCGTGGCAC
*
18390 CCTTTTAAGACCACAACTCCGTGGCAC
1 CCTTTTAAGTCCACAACTCCGTGGCAC
18417 CCTTTTAAGTCCACAACTCCGTGGCAC
1 CCTTTTAAGTCCACAACTCCGTGGCAC
* * **
18444 CCTTTTAAGTCCATAACACTATGGCAGTC
1 CCTTTTAAGTCCACAACTCCGTGGCA--C
18473 TTTTTCCTTTTAAGTCCACAACTCCGTGGCACC
1 -----CCTTTTAAGTCCACAACTCCGTGGCA-C
* *
18506 TTGTTCCTTTTAAGTACACAATTCCGTGGCAC
1 -----CCTTTTAAGTCCACAACTCCGTGGCAC
* *
18538 CTTTTTCTTTTTAAAGCCCATAACTCCGTGGCACTC
1 C-----C-TTTT-AAGTCCACAACTCCGTGGCA--C
**
18574 TTTTTCCTTTTAAGTCCACAACTTTGTGGCAC
1 -----CCTTTTAAGTCCACAACTCCGTGGCAC
**
18606 CCTTTTAAGTCCACAACTCTATGGCAC
1 CCTTTTAAGTCCACAACTCCGTGGCAC
* * *
18633 CTTTTTCTTTTTAAAGCCCACAACACCGTGACACTC
1 C-----C-TTTT-AAGTCCACAACTCCGTGGCA--C
*
18669 TTTTTCCTTTTAAGTCCACAACTGCGTGGCAC
1 -----CCTTTTAAGTCCACAACTCCGTGGCAC
* **
18701 CTTGTTCATTTTAAGTCCACAATTTTGTGGCAC
1 C-----C-TTTTAAGTCCACAACTCCGTGGCAC
*
18734 CTTTTTCTTTTTAAAGCCCACAACTCCGTGGCAC
1 C-----C-TTTT-AAGTCCACAACTCCGTGGCAC
*
18768 TTTTTTTCCTTTTAAGTCCACAACTCCATGGCAC
1 -------CCTTTTAAGTCCACAACTCCGTGGCAC
18802 CCTTTTAAGTCCACAACTCCGTGGCAC
1 CCTTTTAAGTCCACAACTCCGTGGCAC
18829 C
1 C
18830 TTGTTCCTTT
Statistics
Matches: 344, Mismatches: 47, Indels: 98
0.70 0.10 0.20
Matches are distributed among these distances:
27 127 0.37
29 1 0.00
32 6 0.02
33 69 0.20
34 121 0.35
35 12 0.03
36 5 0.01
41 3 0.01
ACGTcount: A:0.22, C:0.31, G:0.13, T:0.35
Consensus pattern (27 bp):
CCTTTTAAGTCCACAACTCCGTGGCAC
Found at i:18590 original size:101 final size:98
Alignment explanation
Indices: 17992--18965 Score: 796
Period size: 101 Copynumber: 10.0 Consensus size: 98
17982 AGTGGCATTT
** * *
17992 CTTTTAAGTCCACAACTCCGTGGCAGTTTTTTCTTTTTAAAGCCCACAACTCCGTGGCACTCTTT
1 CTTTTAAGTCCACAACTCCGTGGCA-CCTTTTCCTTTT-AAGTCCACAACTCCGTGGCAC-CTTT
*
18057 TTCCTTTTAAGTCCACAACTCTGTGGCA-C-----C
63 TTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTC
* * * * *
18087 CTTTTAAGTCCATAACTCTGTGGCACCTTTCTCTTTTTTTTTAAAGCCCACAACTCCGTGGTACT
1 CTTTTAAGTCCACAACTCCGTGGCACCTTT-TC----CTTTT-AAGTCCACAACTCCGTGGCAC-
*
18152 CTTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTCTTC
59 CTTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTC
* * * * * *
18192 CTTTTAAGTCCACAACTCTGTGGCACCTTTCTCTTTTTCTTAAAGCCCACAACTCCATGGTACTA
1 CTTTTAAGTCCACAACTCCGTGGCACCTTT-TC--CTT-TT-AAGTCCACAACTCCGTGGCAC-C
*
18257 TTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTCTTC
60 TTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTC
* * * *
18296 CTTTTAAGTCCACAATTCCGTGGCACCTTTTTCTTTTTAAAG-CCTGCAACCCCGTGGCACTCTT
1 CTTTTAAGTCCACAACTCCGTGGCACC-TTTTCCTTTT-AAGTCC-ACAACTCCGTGGCAC-CTT
* *
18360 TTTCCTTTTAAGTCCATAACTCCGTTGCA-C-----C
62 TTTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTC
*
18391 CTTTTAAGACCACAACTCCGTGGCA-C----CCTTTTAAGTCCACAACTCCGTGGCA-C-----C
1 CTTTTAAGTCCACAACTCCGTGGCACCTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTC
* * ** *
18445 CTTTTAAGTCCATAACACTATGGCAGTCTTTTTC
66 CTTTTAAGTCCACAACTCCGTGGCA-CCTTTTTC
* *
18479 CTTTTAAGTCCACAACTCCGTGGCACCTTGTTCCTTTTAAGTACACAATTCCGTGGCACCTTTTT
1 CTTTTAAGTCCACAACTCCGTGGCACCTT-TTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTT
* * *
18544 CTTTTTAAAGCCCATAACTCCGTGGCACTCTTTTTC
65 CCTTTT-AAGTCCACAACTCCGTGGCAC-CTTTTTC
** **
18580 CTTTTAAGTCCACAACTTTGTGGCA-C----CCTTTTAAGTCCACAACTCTATGGCACCTTTTTC
1 CTTTTAAGTCCACAACTCCGTGGCACCTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTC
* * * *
18640 TTTTTAAAGCCCACAACACCGTGACACTCTTTTTC
66 CTTTT-AAGTCCACAACTCCGTGGCAC-CTTTTTC
* * * **
18675 CTTTTAAGTCCACAACTGCGTGGCACCTTGTTCATTTTAAGTCCACAATTTTGTGGCACCTTTTT
1 CTTTTAAGTCCACAACTCCGTGGCACCTT-TTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTT
* * *
18740 CTTTTTAAAGCCCACAACTCCGTGGCACTTTTTTTC
65 CCTTTT-AAGTCCACAACTCCGTGGCAC-CTTTTTC
* *
18776 CTTTTAAGTCCACAACTCCATGGCA-C----CCTTTTAAGTCCACAACTCCGTGGCACCTTGTTC
1 CTTTTAAGTCCACAACTCCGTGGCACCTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTC
* *
18836 CTTTTAAGTCCATAACTCCGTGCCACC-TTTTC
66 CTTTTAAGTCCACAACTCCGTGGCACCTTTTTC
* * ** ** * * * *
18868 TTTTTAAGTCTACAACTTTGTGGCACCCTTTTCCCTTTTAAACCCATACCTCCATGGCATTCCCT
1 CTTTTAAGTCCACAACTCCGTGGCA-CCTTTT-CCTTTTAAGTCCACAACTCCGTGGCA--CCTT
* *
18933 TTTCC-TATAAGTCCACAACTCTGTGGCACCTTT
62 TTTCCTTTTAAGTCCACAACTCCGTGGCACCTTT
18966 AAGCCCAATA
Statistics
Matches: 745, Mismatches: 82, Indels: 98
0.81 0.09 0.11
Matches are distributed among these distances:
81 22 0.03
83 1 0.00
86 1 0.00
88 40 0.05
89 8 0.01
92 25 0.03
94 47 0.06
95 168 0.23
96 1 0.00
99 79 0.11
100 32 0.04
101 187 0.25
102 3 0.00
103 5 0.01
104 90 0.12
105 36 0.05
ACGTcount: A:0.20, C:0.31, G:0.12, T:0.37
Consensus pattern (98 bp):
CTTTTAAGTCCACAACTCCGTGGCACCTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTC
CTTTTAAGTCCACAACTCCGTGGCACCTTTTTC
Found at i:18612 original size:128 final size:125
Alignment explanation
Indices: 18238--18964 Score: 456
Period size: 128 Copynumber: 5.7 Consensus size: 125
18228 TTCTTAAAGC
* * * *
18238 CCACAACTCCATGGTACTATTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTCTTCCTTTTAA
1 CCACAACTCCGTGGCAC-CTTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTT-TTTCTTTTAA
* * * * ***
18303 GTCCACAATTCCGTGGCACCTTTTTCTTTTTAAAG-CCTGCAACCCCGTGGCACTCTTTTTCCTT
64 GTCCACAACTCCGTGGCACCTTGTTCCTTTT-AAGTCC-ACAACTTTGTGGCA--C-----CCTT
18367 TTAAGT
120 TTAAGT
* * *
18373 CCATAACTCCGTTGCA-C-----CCTTTTAAGACCACAACTCCGTGGCACC-----CTTTTAAGT
1 CCACAACTCCGTGGCACCTTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTCTTTTAAGT
* ** *
18427 CCACAACTCCGTGGCA-C-----CCTTTTAAGTCCATAACACTATGGCAGTCTTTTTCCTTTTAA
66 CCACAACTCCGTGGCACCTTGTTCCTTTTAAGTCCACAACTTTGTGGCA--C-----CCTTTTAA
18486 GT
124 GT
* * *
18488 CCACAACTCCGTGGCACCTTGTTCCTTTTAAGTACACAATTCCGTGGCACCTTTTTCTTTTTAAA
1 CCACAACTCCGTGGCACCTTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTC-TTTT-AA
* * *
18553 GCCCATAACTCCGTGGCACTCTTTTTCCTTTTAAGTCCACAACTTTGTGGCACCCTTTTAAGT
64 GTCCACAACTCCGTGGCAC-CTTGTTCCTTTTAAGTCCACAACTTTGTGGCACCCTTTTAAGT
** * * * *
18616 CCACAACTCTATGGCACCTTTTTCTTTTTAAAGCCCACAACACCGTGACACTCTTTTTCCTTTTA
1 CCACAACTCCGTGGCACCTTTTTCCTTTT-AAGTCCACAACTCCGTGGCAC-CTTTTT-CTTTTA
* * *
18681 AGTCCACAACTGCGTGGCACCTTGTTCATTTTAAGTCCACAATTTTGTGGCACCTTTTTCTTTTT
63 AGTCCACAACTCCGTGGCACCTTGTTCCTTTTAAGTCCACAACTTTGTGGCACC-----C-TTTT
*
18746 AAAGC
122 -AAGT
* *
18751 CCACAACTCCGTGGCACTTTTTTTCCTTTTAAGTCCACAACTCCATGGCACC-----CTTTTAAG
1 CCACAACTCCGTGGCAC-CTTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTCTTTTAAG
* ** *
18811 TCCACAACTCCGTGGCACCTTGTTCCTTTTAAGTCCATAACTCCGTGCCACCTTTTCTTTTTAAG
65 TCCACAACTCCGTGGCACCTTGTTCCTTTTAAGTCCACAACTTTGTGGCACC----C-TTTTAAG
18876 T
125 T
* ** * ** * * * * * *
18877 CTACAACTTTGTGGCACCCTTTTCCCTTTTAAACCCATACCTCCATGGCATTCCCTTTTCCTATA
1 CCACAACTCCGTGGCA-CCTTTTTCCTTTTAAGTCCACAACTCCGTGGCA--CCTTTTTCTTTTA
*
18942 AGTCCACAACTCTGTGGCACCTT
63 AGTCCACAACTCCGTGGCACCTT
18965 TAAGCCCAAT
Statistics
Matches: 483, Mismatches: 69, Indels: 82
0.76 0.11 0.13
Matches are distributed among these distances:
115 43 0.09
116 8 0.02
121 26 0.05
122 24 0.05
126 43 0.09
127 15 0.03
128 166 0.34
129 34 0.07
130 11 0.02
131 1 0.00
133 28 0.06
134 5 0.01
135 69 0.14
136 10 0.02
ACGTcount: A:0.21, C:0.31, G:0.12, T:0.36
Consensus pattern (125 bp):
CCACAACTCCGTGGCACCTTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTTTTCTTTTAAGT
CCACAACTCCGTGGCACCTTGTTCCTTTTAAGTCCACAACTTTGTGGCACCCTTTTAAGT
Found at i:18718 original size:412 final size:414
Alignment explanation
Indices: 18046--18829 Score: 1134
Period size: 412 Copynumber: 1.9 Consensus size: 414
18036 CACAACTCCG
* * * *
18046 TGGCACTCTTTTTCCTTTTAAGTCCACAACTCTGTGGCACCCTTTTAAGTCCATAACTCTGTGGC
1 TGGCACTCTTTTTCCTTTTAAGTCCACAACTCCGTGGCACCCTTTTAAGTACACAACTCCGTGGC
* *
18111 ACCTTTCTCTTTTTTTTTAAAGCCCACAACTCCGTGGTACTCTTTTTCCTTTTAAGTCCACAACT
66 ACC-TTCTCTTTCTTTTTAAAGCCCACAACTCCGTGGCACTCTTTTTCCTTTTAAGTCCACAACT
* *
18176 CCGTGGCACCTTCTTCCTTTTAAGTCCACAACTCTGTGGCACCTTTCTCTTTTTCTTAAAGCCCA
130 CCGTGGCA-C--C-TCCTTTTAAGTCCACAACTCTATGGCACCTTTCTCTCTTTCTTAAAGCCCA
* ** *
18241 CAACTCCATGGTACTATTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTCTTCCTTTTAAGTC
191 CAACACCATGACACTATTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTCTTCATTTTAAGTC
**
18306 CACAATTCCGTGGCACCTTTTTCTTTTTAAAGCCTGCAACCCCGTGGCACTCTTTTTCCTTTTAA
256 CACAATTCCGTGGCACCTTTTTCTTTTTAAAGCCCACAACCCCGTGGCACTCTTTTTCCTTTTAA
* * *
18371 GTCCATAACTCCGTTGCACCCTTTTAAGACCACAACTCCGTGGCACCCTTTTAAGTCCACAACTC
321 GTCCACAACTCCATGGCACCCTTTTAAGACCACAACTCCGTGGCACCCTTTTAAGTCCACAACTC
18436 CGTGGCACCCTTTTAAGTCCATAACACTA
386 CGTGGCACCCTTTTAAGTCCATAACACTA
* *
18465 TGGCAGTCTTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTGTTCCTTTTAAGTACACAATTC
1 TGGCACTCTTTTTCCTTTTAAGTCCACAACTCCGTGGCA-C-----CCTTTTAAGTACACAACTC
*
18530 CGTGGCACC-T-T-TTTCTTTTTAAAGCCCATAACTCCGTGGCACTCTTTTTCCTTTTAAGTCCA
60 CGTGGCACCTTCTCTTTCTTTTTAAAGCCCACAACTCCGTGGCACTCTTTTTCCTTTTAAGTCCA
**
18592 CAACTTTGTGGCA-C-CCTTTTAAGTCCACAACTCTATGGCACCTTT-T-TCTTT-TTAAAGCCC
125 CAACTCCGTGGCACCTCCTTTTAAGTCCACAACTCTATGGCACCTTTCTCTCTTTCTTAAAGCCC
* * * *
18652 ACAACACCGTGACACTCTTTTTCCTTTTAAGTCCACAACTGCGTGGCACCTTGTTCATTTTAAGT
190 ACAACACCATGACACTATTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTCTTCATTTTAAGT
** * *
18717 CCACAATTTTGTGGCACCTTTTTCTTTTTAAAGCCCACAACTCCGTGGCACTTTTTTTCCTTTTA
255 CCACAATTCCGTGGCACCTTTTTCTTTTTAAAGCCCACAACCCCGTGGCACTCTTTTTCCTTTTA
*
18782 AGTCCACAACTCCATGGCACCCTTTTAAGTCCACAACTCCGTGGCACC
320 AGTCCACAACTCCATGGCACCCTTTTAAGACCACAACTCCGTGGCACC
18830 TTGTTCCTTT
Statistics
Matches: 328, Mismatches: 31, Indels: 19
0.87 0.08 0.05
Matches are distributed among these distances:
412 169 0.52
413 4 0.01
414 1 0.00
415 30 0.09
417 1 0.00
419 37 0.11
420 1 0.00
421 59 0.18
422 1 0.00
423 1 0.00
425 24 0.07
ACGTcount: A:0.21, C:0.31, G:0.12, T:0.36
Consensus pattern (414 bp):
TGGCACTCTTTTTCCTTTTAAGTCCACAACTCCGTGGCACCCTTTTAAGTACACAACTCCGTGGC
ACCTTCTCTTTCTTTTTAAAGCCCACAACTCCGTGGCACTCTTTTTCCTTTTAAGTCCACAACTC
CGTGGCACCTCCTTTTAAGTCCACAACTCTATGGCACCTTTCTCTCTTTCTTAAAGCCCACAACA
CCATGACACTATTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTCTTCATTTTAAGTCCACAA
TTCCGTGGCACCTTTTTCTTTTTAAAGCCCACAACCCCGTGGCACTCTTTTTCCTTTTAAGTCCA
CAACTCCATGGCACCCTTTTAAGACCACAACTCCGTGGCACCCTTTTAAGTCCACAACTCCGTGG
CACCCTTTTAAGTCCATAACACTA
Found at i:19036 original size:49 final size:49
Alignment explanation
Indices: 18962--19353 Score: 352
Period size: 49 Copynumber: 7.9 Consensus size: 49
18952 TCTGTGGCAC
* * ** * * *
18962 CTTTAAGCCCAATATCACGGGCCTTGAATCAGCATATTGGCACCATCAT
1 CTTTAAGTCCAATGTCATTGGCCTTGAATCAACACATTGGCACCTTCAT
* * ** * * *
19011 CTTTAAGACCGATGTTGTTGGCCTTGAATCAGCACATTGACAGCTTAACCAT
1 CTTTAAGTCCAATGTCATTGGCCTTGAATCAACACATTGGCACCTT---CAT
* * * * *
19063 CTTTAAGTCCAATGTCGTCGGCCTTGAATCAGCACATTGGCATCTTCAA
1 CTTTAAGTCCAATGTCATTGGCCTTGAATCAACACATTGGCACCTTCAT
* * * * *
19112 CTTTAAGTCCGATATCGTTGGCCTTGAATCAACATATTGGCACCTTTAT
1 CTTTAAGTCCAATGTCATTGGCCTTGAATCAACACATTGGCACCTTCAT
* * * * *
19161 CTTTAAGACCAATGTCACTGGCCTTGAATTAGCACATTGGCACTTTAACCAT
1 CTTTAAGTCCAATGTCATTGGCCTTGAATCAACACATTGGCACCTT---CAT
* ** ** *
19213 CTTTAAGTCCAATGTTACCGGCCTTGAATCAACACATTATCATCTTCAT
1 CTTTAAGTCCAATGTCATTGGCCTTGAATCAACACATTGGCACCTTCAT
** * * *
19262 CTTTAAGTCTGATATCATTGGCCTTGAATCAACATATTGGCACCTTTAT
1 CTTTAAGTCCAATGTCATTGGCCTTGAATCAACACATTGGCACCTTCAT
* *
19311 CTTTAAGACCAATGTCATTGTCCTTGAATCAACACATTGGCAC
1 CTTTAAGTCCAATGTCATTGGCCTTGAATCAACACATTGGCAC
19354 AAGCCCAATA
Statistics
Matches: 275, Mismatches: 62, Indels: 12
0.79 0.18 0.03
Matches are distributed among these distances:
49 193 0.70
52 82 0.30
ACGTcount: A:0.27, C:0.25, G:0.16, T:0.32
Consensus pattern (49 bp):
CTTTAAGTCCAATGTCATTGGCCTTGAATCAACACATTGGCACCTTCAT
Found at i:19137 original size:101 final size:98
Alignment explanation
Indices: 18962--19349 Score: 309
Period size: 101 Copynumber: 3.9 Consensus size: 98
18952 TCTGTGGCAC
* * * * * * *
18962 CTTTAAGCCCAATATCACGGGCCTTGAATCAGCATATTGGCACCATCATCTTTAAGACCGATGTT
1 CTTTAAGACCAATGTCACTGGCCTTGAATCAGCACATTGGCACCATCAACTTTAAGACCGATATC
* *
19027 GTTGGCCTTGAATCAGCACATTGACAGCTTAACCAT
66 GTTGGCCTTGAATCAACACATTGACACCTT---CAT
* * * * *
19063 CTTTAAGTCCAATGTC-GTCGGCCTTGAATCAGCACATTGGCATCTTCAACTTTAAGTCCGATAT
1 CTTTAAGACCAATGTCACT-GGCCTTGAATCAGCACATTGGCACCATCAACTTTAAGACCGATAT
* * *
19127 CGTTGGCCTTGAATCAACATATTGGCACCTTTAT
65 CGTTGGCCTTGAATCAACACATTGACACCTTCAT
* * * * *
19161 CTTTAAGACCAATGTCACTGGCCTTGAATTAGCACATTGGCACTTTAACCATCTTTAAGTCC-A-
1 CTTTAAGACCAATGTCACTGGCCTTGAATCAGCACATTGGCAC---CATCAACTTTAAGACCGAT
*
19224 AT-GTTACCGGCCTTGAATCAACACATT-ATCATCTTCAT
63 ATCGTT---GGCCTTGAATCAACACATTGA-CACCTTCAT
* ** * * * * * * * * *
19262 CTTTAAGTCTGATATCATTGGCCTTGAATCAACATATTGGCACCTTTATCTTTAAGACCAATGTC
1 CTTTAAGACCAATGTCACTGGCCTTGAATCAGCACATTGGCACCATCAACTTTAAGACCGATATC
* *
19327 ATTGTCCTTGAATCAACACATTG
66 GTTGGCCTTGAATCAACACATTG
19350 GCACAAGCCC
Statistics
Matches: 230, Mismatches: 44, Indels: 28
0.76 0.15 0.09
Matches are distributed among these distances:
98 71 0.31
99 4 0.02
100 2 0.01
101 153 0.67
ACGTcount: A:0.27, C:0.24, G:0.15, T:0.33
Consensus pattern (98 bp):
CTTTAAGACCAATGTCACTGGCCTTGAATCAGCACATTGGCACCATCAACTTTAAGACCGATATC
GTTGGCCTTGAATCAACACATTGACACCTTCAT
Found at i:19235 original size:150 final size:149
Alignment explanation
Indices: 18962--19353 Score: 550
Period size: 150 Copynumber: 2.6 Consensus size: 149
18952 TCTGTGGCAC
* * ** * * * * *
18962 CTTTAAGCCCAATATCACGGGCCTTGAATCAGCATATTGGCACCATCATCTTTAAGACCGATGTT
1 CTTTAAGTCCGATATCATTGGCCTTGAATCAACATATTGGCACCTTTATCTTTAAGACCAATGTC
* * **
19027 GTTGGCCTTGAATCAGCACATTGACAGCTTAACCATCTTTAAGTCCAATGTCGTCGGCCTTGAAT
66 ATTGGCCTTGAATCAGCACATTGGCA-CTTAACCATCTTTAAGTCCAATGTCACCGGCCTTGAAT
* *
19092 CAGCACATTGGCATCTTCAA
130 CAACACATTAGCATCTTCAA
*
19112 CTTTAAGTCCGATATCGTTGGCCTTGAATCAACATATTGGCACCTTTATCTTTAAGACCAATGTC
1 CTTTAAGTCCGATATCATTGGCCTTGAATCAACATATTGGCACCTTTATCTTTAAGACCAATGTC
* * *
19177 ACTGGCCTTGAATTAGCACATTGGCACTTTAACCATCTTTAAGTCCAATGTTACCGGCCTTGAAT
66 ATTGGCCTTGAATCAGCACATTGGCAC-TTAACCATCTTTAAGTCCAATGTCACCGGCCTTGAAT
* *
19242 CAACACATTATCATCTTCAT
130 CAACACATTAGCATCTTCAA
*
19262 CTTTAAGTCTGATATCATTGGCCTTGAATCAACATATTGGCACCTTTATCTTTAAGACCAATGTC
1 CTTTAAGTCCGATATCATTGGCCTTGAATCAACATATTGGCACCTTTATCTTTAAGACCAATGTC
* *
19327 ATTGTCCTTGAATCAACACATTGGCAC
66 ATTGGCCTTGAATCAGCACATTGGCAC
19354 AAGCCCAATA
Statistics
Matches: 214, Mismatches: 27, Indels: 2
0.88 0.11 0.01
Matches are distributed among these distances:
149 1 0.00
150 213 1.00
ACGTcount: A:0.27, C:0.25, G:0.16, T:0.32
Consensus pattern (149 bp):
CTTTAAGTCCGATATCATTGGCCTTGAATCAACATATTGGCACCTTTATCTTTAAGACCAATGTC
ATTGGCCTTGAATCAGCACATTGGCACTTAACCATCTTTAAGTCCAATGTCACCGGCCTTGAATC
AACACATTAGCATCTTCAA
Found at i:19434 original size:33 final size:33
Alignment explanation
Indices: 19397--19460 Score: 101
Period size: 33 Copynumber: 1.9 Consensus size: 33
19387 TGGCACCTTT
* *
19397 ATCTTTAAGACTAATGTCGTTGGCCTTGAATTC
1 ATCTTTAAGACCAATATCGTTGGCCTTGAATTC
*
19430 ATCTTTAAGTCCAATATCGTTGGCCTTGAAT
1 ATCTTTAAGACCAATATCGTTGGCCTTGAAT
19461 CAGCATATTA
Statistics
Matches: 28, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
33 28 1.00
ACGTcount: A:0.25, C:0.19, G:0.17, T:0.39
Consensus pattern (33 bp):
ATCTTTAAGACCAATATCGTTGGCCTTGAATTC
Found at i:20421 original size:20 final size:20
Alignment explanation
Indices: 20396--20450 Score: 76
Period size: 20 Copynumber: 2.8 Consensus size: 20
20386 CTGCCAAGGA
20396 AATGTATCGATACATT-ATTC
1 AATGTATCGATACATTGA-TC
20416 AATGTATCGATACATTGATC
1 AATGTATCGATACATTGATC
**
20436 TTTGTATCGATACAT
1 AATGTATCGATACAT
20451 CTGGGAATTT
Statistics
Matches: 32, Mismatches: 2, Indels: 2
0.89 0.06 0.06
Matches are distributed among these distances:
20 31 0.97
21 1 0.03
ACGTcount: A:0.33, C:0.15, G:0.13, T:0.40
Consensus pattern (20 bp):
AATGTATCGATACATTGATC
Found at i:24560 original size:476 final size:475
Alignment explanation
Indices: 23578--27501 Score: 4875
Period size: 476 Copynumber: 8.3 Consensus size: 475
23568 ACGTTGCGAC
* * ** * *
23578 AATAAGGATGCATGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTTCCTACCAATTTTTGT
1 AATACGGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGT
* * *
23643 ACATTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGTATCTTCATTCATTTCG
66 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
* * *
23708 TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAAAGATATTGATGGTTTTCTTTTGCAT
131 TGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCAT
* ** *
23773 GGAAATCTTTTCTTTGACTTGTTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
196 GGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGAACTTTAAATGAGACATGCATT
* * * * *
23838 GATTCCCGTAAGAGTCTCCATTC-TTTTCAAGATTGGGAACCAAAAATACATTCCCTTCAATAGG
261 GATTCTCGTAAAAGTCTCCATTCGTTCT-AAGATTGGGAACCAAAAACACATTCCC-TCATTAGG
* * * ** * * *
23902 ATACATGACATTGATGCTTTGGTGTCGCGAGAGAAGGTGTTCTCCCCACCATTATTGAAAGAATC
324 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAGAATC
* * ** *
23967 AAAGTTTGTCTCTTAAATCAGATAAACATGAATAGC-CATACTAATCCACTTTTTTTTTCTAGAT
389 AAAGTTTGTCTCTTAAATAAGACAAACATGAATA-CTCATACTAATCC-CCATTCTTTTCTAGAT
* *
24031 TAGGCACTATAAACATAGTCTTCT
452 TAGGCACCATAAACAGAGTCTTCT
* * * *
24055 CAT-CAGGATACATGAT-TTGATGCTTTGGTTTCATAAAAAATGCTTTCTTCCCACCAATTTTTG
1 AATAC-GGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTG
* * * * * * *
24118 TAAAGTATAAGTTCATTCTTCAAATGAGACAAACATGGAATCTAGCAAGGATCTTCATTCATTTC
65 TAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTC
* * * * *
24183 GTGATTAAGCACTATAAACACATTATCCCCAATAGGATAAATGATACTGATAGTTTTCTTTTGCC
130 GTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCA
* * * * *
24248 TGGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGAACTCTAAATGAGATAAGCAA
195 TGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGAACTTTAAATGAGACATGCAT
* *
24313 TGATTCTCGAAAAAGTCTCCATTCGTTCTTAGATTGGGAACCAAAAACACATTCCCTCGATTAGG
260 TGATTCTCGTAAAAGTCTCCATTCGTTCTAAGATTGGGAACCAAAAACACATTCCCTC-ATTAGG
*
24378 ATACATGACATTGATGCTTTTGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATA-AAGT
324 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAGAA-T
* * * *
24442 CAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATAGTAATCCCCATTATTTTC-AGGAT
388 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-GAT
*
24506 TCGGCACCATAAACAGAGTCTTCT
452 TAGGCACCATAAACAGAGTCTTCT
* * * * * * *
24530 TATACGGATACAGGATATTGATGATTTGGTTTCGCTAGAAATGCTTTTTTCCCA-CAATTTTTGT
1 AATACGGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGT
* * * * *
24594 AGATTCTATGTTCGTGCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCATCATTCATTTCA
66 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
* * * * *
24659 TGATTAGGCACTATAAACACATTCTTCTC-TTCAGGATGCAA-GATATTGATGGTTTTCTTTGGC
131 TGATTAGGCACTATAAACACATTCTCCCCAAT-AGGAT-AAATGATATTGATGGTTTTCTTTTGC
* * *
24722 ATGGAAATCTTTTCCTTGCCTAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
194 ATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGAACTTTAAATGAGACATGCA
* * * * *
24787 TTGATTCTCGTAAAAGTCTCCATTCTTTCTAATATTGGGAACCAATAACACATTCCCTATATTAT
259 TTGATTCTCGTAAAAGTCTCCATTCGTTCTAAGATTGGGAACCAAAAACACATTCCCT-CATTAG
* * * ** *
24852 GATACATGACATTGATGCTTTGGCGTCACAAGAAAATATTTTCTTTCCACCGTTATTGATAGAAT
323 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAGAAT
* * * * * *
24917 CAAAGTTTGTCTCCTAAATAAGACAAAAATGAATACTCACACTACTCCACATTCTTTTCTATATT
388 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATT
*
24982 AGGCACCATAAACATAGTCTTCT
453 AGGCACCATAAACAGAGTCTTCT
* * * * *
25005 AATAGGGATACATGATATTGATGCTATGGTTTCGCAAGAAACGCTTTCTTTCAACCAATTTTTGT
1 AATACGGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGT
* *
25070 AAACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTTG
66 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
* * *
25135 TGATTGGGCACTCTAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCT
131 TGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCAT
* * * *
25200 GGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGAACTCTAAATGAGACAAGCAAT
196 GGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGAACTTTAAATGAGACATGCATT
* * *
25265 CATTCTCGTAAAAGTCTCTATTCGTTCCAAGATTGGGAACCAAAAACACATT-CC-C-------T
261 GATTCTCGTAAAAGTCTCCATTCGTTCTAAGATTGGGAACCAAAAACACATTCCCTCATTAGGAT
*
25321 ---TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATA-AAGCCA
326 ACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAGAA-TCA
* * * * *
25382 AAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATAGTAATCCCCATTATTTTC-AGGATTT
390 AAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-GATTA
*
25446 GGCATCATAAACAGAGTCTTCT
454 GGCACCATAAACAGAGTCTTCT
* * * * * *
25468 TATACGGATACAGGATATTGATGATTTGGTTTCACTAGAGACGCTTTTTTCCCA-CAATTTTTGT
1 AATACGGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGT
* * * ** * *
25532 AGATTCTATGTTTGTGCCTCAAATGAGGTAAACATGGATTCTAGTAAGGATCATCATTCATTTCA
66 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
**
25597 TGATTAGGCACTATAAACACATTCTCCTCCACA-A-GATGCATGATATTGATGGTTTTCTTTTGC
131 TGATTAGGCACTATAAACACATTCTCC-CCA-ATAGGATAAATGATATTGATGGTTTTCTTTTGC
* * *
25660 ATGGACATCTTTTCTTTGCCTAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
194 ATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGAACTTTAAATGAGACATGCA
* * * * *
25725 TTGATTCTCGTAAAAGTCTCCATTCTTTCTAATATTGGGAACCAATAACACATTCCCTATATTAT
259 TTGATTCTCGTAAAAGTCTCCATTCGTTCTAAGATTGGGAACCAAAAACACATTCCCT-CATTAG
* * *
25790 GATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCGTTATTGATAGAAT
323 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAGAAT
* * * *
25855 CAAAGTTTGTCTCCTAAATAAGACAAAAATGAATACTCATACTAATCCACATTCTTTTCTATATT
388 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATT
*
25920 AGGCACCATAAACATAGTCTTCT
453 AGGCACCATAAACAGAGTCTTCT
* * * * *
25943 AATAGGGATACATGATATTGATGCTATGGTTTCGCAAGAAACGCTTTCTTTCAACCAATTTTTGT
1 AATACGGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGT
* *
26008 AAACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTGCG
66 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
* *
26073 TGATTAGGCACTCTAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCT
131 TGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCAT
* * * *
26138 GGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGAACTCTAAATGAGACAAGCAAT
196 GGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGAACTTTAAATGAGACATGCATT
** * *
26203 CTTTCTCGTAAAAGTCTCTATTCGTTCCAAGATTGGGAACCAAAAACACATT-CC-C-------T
261 GATTCTCGTAAAAGTCTCCATTCGTTCTAAGATTGGGAACCAAAAACACATTCCCTCATTAGGAT
*
26259 ---TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATA-AAGCCA
326 ACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAGAA-TCA
* * * * *
26320 AAGTTTGTCTCTTAAATAAGGCAAACCTGAATACTCATAGTAATCCCCATTATTTTC-AGGATTC
390 AAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-GATTA
*
26384 GGCATCATAAACAGAGTCTTCT
454 GGCACCATAAACAGAGTCTTCT
* * * * * * *
26406 TATACGGATATAGGATATTGATGATTTGGTTTCACTAGAGACGCTTTTTTCCCA-CAATTTTTGT
1 AATACGGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGT
* * * * * *
26470 AGATTCTATGTTTGTGCCTCAAATGAGATAAACATGGATTCTAGTAAGGATCATCATTCATTTCA
66 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
**
26535 TGATTAGGCACTATAAACACATTCTCCTCCACA-A-GATGCATGATATTGATGGTTTTCTTTTGC
131 TGATTAGGCACTATAAACACATTCTCC-CCA-ATAGGATAAATGATATTGATGGTTTTCTTTTGC
*
26598 ATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAACGTTT-ATACTTTAAATGAGACATGC
194 ATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGA-ACTTTAAATGAGACATGC
* * *
26662 ATTGATTCTCGTAAAAGTCTCCATTCTTTCTAATATTGGGAACCAAAAACACATTCCCTATATTA
258 ATTGATTCTCGTAAAAGTCTCCATTCGTTCTAAGATTGGGAACCAAAAACACATTCCCT-CATTA
* ** **
26727 CGATACATGACATTGATGCTTTGGCATCATAAGAGAAGCTTTTCTTTCC-ACTGTTATTGATAGA
322 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAAC-GTTATTGATAGA
* *
26791 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCACACTAATCCACATTCTTTTCTAGA
386 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
* * *
26856 GTAGGCACCATAAACATAGTCTTCA
451 TTAGGCACCATAAACAGAGTCTTCT
* *
26881 AATA-GCGATACATGATATTGATG-TTATGTTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTT
1 AATACG-GATACATGATATTGATGCTT-TGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTT
* *
26944 GTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGGAAGGATCTTCATTCATTT
64 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * * * *
27009 CGTGATTAGGCACTATAAAAAGATTCTCCACATTAGGATAAATGATACTGATGCCTTTTTTTTTG
129 CGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATG-GTTTTCTTTTG
* * * * *
27074 CATGAAAATCTTTTTTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGT
193 CATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGAACTTTAAATGAGACATGC
* * *
27139 ATTGATTCTCATAAAAGTCTCCATTC-TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATT
258 ATTGATTCTCGTAAAAGTCTCCATTCGTTCT-AAGATTGGGAACCAAAAACACATTCC-CTCATT
* * *
27203 AGGATACATGACATTGATACTTTAGG-GTTGCAAGAGAAGC-TTTC-TTCGCACCGTTATTGATA
321 AGGATACATGACATTGATGCTTT-GGTGTCGCAAGAGAAGCTTTTCTTTC-CAACGTTATTGATA
* * * * *
27265 GAATCAAAG-TTGTCTCTTAAATGAGACAAACATGAATGCCCA-ACTATTCCCTATTCTTTTC-A
384 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA
*
27327 GGATTAGGCACCATAAACATG-GCCTTCT
449 -GATTAGGCACCATAAACA-GAGTCTTCT
* * * * * * **
27355 CATAAAGG-TGCATGATATTGATGCTTTGG-CTCACAAGATACGCATTCTTCCCACTTATTTTTG
1 AAT-ACGGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTG
* * * * * *
27418 TAAAGTATAAGTTCATTCCTCAAATTAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTT
65 TAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTC
27483 GTGATTAGGCACTATAAAC
130 GTGATTAGGCACTATAAAC
27502 TTGAATAAAA
Statistics
Matches: 2955, Mismatches: 416, Indels: 156
0.84 0.12 0.04
Matches are distributed among these distances:
461 1 0.00
462 454 0.15
463 346 0.12
464 2 0.00
466 2 0.00
472 2 0.00
473 104 0.04
474 64 0.02
475 831 0.28
476 978 0.33
477 168 0.06
478 3 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (475 bp):
AATACGGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGT
AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
TGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCAT
GGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGAACTTTAAATGAGACATGCATT
GATTCTCGTAAAAGTCTCCATTCGTTCTAAGATTGGGAACCAAAAACACATTCCCTCATTAGGAT
ACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAGAATCAA
AGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATTAGG
CACCATAAACAGAGTCTTCT
Found at i:25744 original size:938 final size:941
Alignment explanation
Indices: 23591--27501 Score: 5686
Period size: 938 Copynumber: 4.1 Consensus size: 941
23581 AAGGATGCAT
* ** * * * * * *
23591 GATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTTCCTACCAATTTTTGTACATTCTAAGTTT
1 GATATTGATGATTTGGTTTCACTAGAAACGCTTTTTTCCCA-CAATTTTTGTAGATTCTATGTTT
* * *
23656 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGTATCTTCATTCATTTCGTGATTAGGCACTA
65 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTA
* * **
23721 TAAACACATTCTCCT-CATTAGGATAAAAGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
130 TAAACACATTCTCCTCCA-CAAGATGCAAGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* ** * *
23785 TTTGACTTGTTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCCCGTAAG
194 TTTGCCTAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
* * * *
23850 AGTCTCCATTCTTT-TCAAGATTGGGAACCAAAAATACATTCCCT-TCAATAGGATACATGACAT
259 AGTCTCCATTCTTTCT-AATATTGGGAACCAAAAACACATTCCCTAT-ATTATGATACATGACAT
* * * * * * ** * *
23913 TGATGCTTTGGTGTCGCGAGAGAAGGTGTTCTCCCCACCATTATTGAAAGAATCAAAGTTTGTCT
322 TGATGCTTTGGCGTCACAAGAAAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCT
* * * * * * * *
23978 CTTAAATCAGATAAACATGAATAGC-CATACTAATCCACTTTTTTTTTCTAGATTAGGCACTATA
387 CCTAAATAAGACAAAAATGAATA-CTCACACTAATCCAC-ATTCTTTTCTAGATTAGGCACCATA
* * ** * *
24042 AACATAGTCTTCTCATCA-GGATACATGAT-TTGATGCTTTGGTTTCATAAAAAATGCTTTCTTC
450 AACATAGTCTTCTAAT-AGGGATACATGATATTGATGCTATGGTTTCGCAAGAAACGCTTTCTTC
* * * * * * * *
24105 CCACCAATTTTTGTAAAGTATAAGTTCATTCTTCAAATGAGACAAACATGGAATCTAGCAAGGAT
514 CAACCAATTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGAT
* * *
24170 CTTCATTCATTTCGTGATTAAGCACTATAAACACATTATCCCCAATAGGATAAATGATACTGATA
579 CTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATACTGATG
24235 GTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGAACTCTAA
644 GTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGAACTCTAA
* * * **
24300 ATGAGATAAGCAATGATTCTCGAAAAAGTCTCCATTCGTTCTTAGATTGGGAACCAAAAACACAT
709 ATGAGACAAGCAATCATTCTCGTAAAAGTCTCCATTCGTTCCAAGATTGGGAACCAAAAACACAT
*
24365 TCCCTCGATTAGGATACATGACATTGATGCTTTTGTGTCGCAAGAGAAGCTTTTCTTTCCAACGT
774 T-CCTC-------AT--ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGT
*
24430 TATTGATAAAGTCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATAGTAATCCCCATT
829 TATTGATAAAGCCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATAGTAATCCCCATT
24495 ATTTTCAGGATTCGGCACCATAAACAGAGTCTTCTTATACGGATACAG
894 ATTTTCAGGATTCGGCACCATAAACAGAGTCTTCTTATACGGATACAG
* * *
24543 GATATTGATGATTTGGTTTCGCTAGAAATGCTTTTTTCCCACAATTTTTGTAGATTCTATGTTCG
1 GATATTGATGATTTGGTTTCACTAGAAACGCTTTTTTCCCACAATTTTTGTAGATTCTATGTTTG
*
24608 TGCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTAT
66 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTAT
* ** * * *
24673 AAACACATTCTTCTCTTCAGGATGCAAGATATTGATGGTTTTCTTTGGCATGGAAATCTTTTCCT
131 AAACACATTCTCCTCCACAAGATGCAAGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
24738 TGCCTAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
196 TGCCTAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
*
24803 TCTCCATTCTTTCTAATATTGGGAACCAATAACACATTCCCTATATTATGATACATGACATTGAT
261 TCTCCATTCTTTCTAATATTGGGAACCAAAAACACATTCCCTATATTATGATACATGACATTGAT
**
24868 GCTTTGGCGTCACAAGAAAATATTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCCTA
326 GCTTTGGCGTCACAAGAAAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCCTA
* *
24933 AATAAGACAAAAATGAATACTCACACTACTCCACATTCTTTTCTATATTAGGCACCATAAACATA
391 AATAAGACAAAAATGAATACTCACACTAATCCACATTCTTTTCTAGATTAGGCACCATAAACATA
*
24998 GTCTTCTAATAGGGATACATGATATTGATGCTATGGTTTCGCAAGAAACGCTTTCTTTCAACCAA
456 GTCTTCTAATAGGGATACATGATATTGATGCTATGGTTTCGCAAGAAACGCTTTCTTCCAACCAA
25063 TTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
521 TTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
* * * *
25128 CATTTTGTGATTGGGCACTCTAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCT
586 CATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATACTGATGGTTTTCT
25193 TTTGCCTGGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGAACTCTAAATGAGAC
651 TTTGCCTGGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGAACTCTAAATGAGAC
*
25258 AAGCAATCATTCTCGTAAAAGTCTCTATTCGTTCCAAGATTGGGAACCAAAAACACATTCC-C-T
716 AAGCAATCATTCTCGTAAAAGTCTCCATTCGTTCCAAGATTGGGAACCAAAAACACATTCCTCAT
25321 -TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAAAGCCAAAG
781 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAAAGCCAAAG
*
25385 TTTGTCTCTTAAATAAGGCAAACTTGAATACTCATAGTAATCCCCATTATTTTCAGGATTTGGCA
846 TTTGTCTCTTAAATAAGGCAAACTTGAATACTCATAGTAATCCCCATTATTTTCAGGATTCGGCA
*
25450 TCATAAACAGAGTCTTCTTATACGGATACAG
911 CCATAAACAGAGTCTTCTTATACGGATACAG
*
25481 GATATTGATGATTTGGTTTCACTAGAGACGCTTTTTTCCCACAATTTTTGTAGATTCTATGTTTG
1 GATATTGATGATTTGGTTTCACTAGAAACGCTTTTTTCCCACAATTTTTGTAGATTCTATGTTTG
**
25546 TGCCTCAAATGAGGTAAACATGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTAT
66 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTAT
* *
25611 AAACACATTCTCCTCCACAAGATGCATGATATTGATGGTTTTCTTTTGCATGGACATCTTTTCTT
131 AAACACATTCTCCTCCACAAGATGCAAGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
25676 TGCCTAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
196 TGCCTAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
*
25741 TCTCCATTCTTTCTAATATTGGGAACCAATAACACATTCCCTATATTATGATACATGACATTGAT
261 TCTCCATTCTTTCTAATATTGGGAACCAAAAACACATTCCCTATATTATGATACATGACATTGAT
*
25806 GCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCCTA
326 GCTTTGGCGTCACAAGAAAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCCTA
* *
25871 AATAAGACAAAAATGAATACTCATACTAATCCACATTCTTTTCTATATTAGGCACCATAAACATA
391 AATAAGACAAAAATGAATACTCACACTAATCCACATTCTTTTCTAGATTAGGCACCATAAACATA
*
25936 GTCTTCTAATAGGGATACATGATATTGATGCTATGGTTTCGCAAGAAACGCTTTCTTTCAACCAA
456 GTCTTCTAATAGGGATACATGATATTGATGCTATGGTTTCGCAAGAAACGCTTTCTTCCAACCAA
26001 TTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
521 TTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
* * *
26066 CATTGCGTGATTAGGCACTCTAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCT
586 CATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATACTGATGGTTTTCT
26131 TTTGCCTGGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGAACTCTAAATGAGAC
651 TTTGCCTGGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGAACTCTAAATGAGAC
* *
26196 AAGCAATCTTTCTCGTAAAAGTCTCTATTCGTTCCAAGATTGGGAACCAAAAACACATTCC-C-T
716 AAGCAATCATTCTCGTAAAAGTCTCCATTCGTTCCAAGATTGGGAACCAAAAACACATTCCTCAT
26259 -TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAAAGCCAAAG
781 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAAAGCCAAAG
*
26323 TTTGTCTCTTAAATAAGGCAAACCTGAATACTCATAGTAATCCCCATTATTTTCAGGATTCGGCA
846 TTTGTCTCTTAAATAAGGCAAACTTGAATACTCATAGTAATCCCCATTATTTTCAGGATTCGGCA
* *
26388 TCATAAACAGAGTCTTCTTATACGGATATAG
911 CCATAAACAGAGTCTTCTTATACGGATACAG
*
26419 GATATTGATGATTTGGTTTCACTAGAGACGCTTTTTTCCCACAATTTTTGTAGATTCTATGTTTG
1 GATATTGATGATTTGGTTTCACTAGAAACGCTTTTTTCCCACAATTTTTGTAGATTCTATGTTTG
*
26484 TGCCTCAAATGAGATAAACATGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTAT
66 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTAT
*
26549 AAACACATTCTCCTCCACAAGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
131 AAACACATTCTCCTCCACAAGATGCAAGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
* * *
26614 TGCCTCATTTTCCTTAAAATCAACGTTTATACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
196 TGCCTAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
*
26679 TCTCCATTCTTTCTAATATTGGGAACCAAAAACACATTCCCTATATTACGATACATGACATTGAT
261 TCTCCATTCTTTCTAATATTGGGAACCAAAAACACATTCCCTATATTATGATACATGACATTGAT
* * * * *
26744 GCTTTGGCATCATAAGAGAAGCTTTTCTTTCCACTGTTATTGATAGAATCAAAGTTTGTCTCTTA
326 GCTTTGGCGTCACAAGAAAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCCTA
* *
26809 AATAAGACAAACATGAATACTCACACTAATCCACATTCTTTTCTAGAGTAGGCACCATAAACATA
391 AATAAGACAAAAATGAATACTCACACTAATCCACATTCTTTTCTAGATTAGGCACCATAAACATA
* * * * *
26874 GTCTTCAAATAGCGATACATGATATTGATGTTATGTTTTCGCAAGAAACGCTTTCTTCCCACCAA
456 GTCTTCTAATAGGGATACATGATATTGATGCTATGGTTTCGCAAGAAACGCTTTCTTCCAACCAA
* * *
26939 TTTTTGTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGGAAGGATCTTCATT
521 TTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
* * * * * *
27004 CATTTCGTGATTAGGCACTATAAAAAGATTCTCCACATTAGGATAAATGATACTGATGCCTTTTT
586 CATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATACTGATG-GTTTTC
* * * * * * *
27069 TTTTGCATGAAAATCTTTTTTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGA
650 TTTTGCCTGGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGAACTCTAAATGAGA
* * * * * * *
27134 CATGTATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTT
715 CAAGCAATCATTCTCGTAAAAGTCTCCATTCGTTCCAAGATTGGGAACCAAAAACACATTCC--T
* * *
27199 CATTAGGATACATGACATTGATACTTTAGG-GTTGCAAGAGAAGC-TTTC-TTCGCACCGTTATT
778 C------AT--ATGACATTGATGCTTT-GGTGTCGCAAGAGAAGCTTTTCTTTC-CAACGTTATT
* * * * * * * * * *
27261 GATAGAA-TCAAAG-TTGTCTCTTAAATGAGACAAACATGAATGCCCA-ACTATTCCCTATTCTT
833 GATA-AAGCCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATAGTAATCCCCATTATT
* * * * * *
27323 TTCAGGATTAGGCACCATAAACATG-GCCTTCTCATAAAGG-TGCAT
897 TTCAGGATTCGGCACCATAAACA-GAGTCTTCTTAT-ACGGATACAG
* * * * * * * * * * * *
27368 GATATTGATGCTTTGG-CTCACAAGATACGCATTCTTCCCACTTATTTTTGTAAAGTATAAGTTC
1 GATATTGATGATTTGGTTTCACTAGAAACGCTTTTTTCCCAC-AATTTTTGTAGATTCTATGTTT
* * * * **
27432 ATTCCTCAAATTAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTTGTGATTAGGCACTA
65 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTA
27497 TAAAC
130 TAAAC
27502 TTGAATAAAA
Statistics
Matches: 2730, Mismatches: 203, Indels: 55
0.91 0.07 0.02
Matches are distributed among these distances:
938 1677 0.61
939 115 0.04
941 1 0.00
942 1 0.00
948 20 0.01
949 140 0.05
950 85 0.03
951 624 0.23
952 65 0.02
953 2 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (941 bp):
GATATTGATGATTTGGTTTCACTAGAAACGCTTTTTTCCCACAATTTTTGTAGATTCTATGTTTG
TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTAT
AAACACATTCTCCTCCACAAGATGCAAGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
TGCCTAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
TCTCCATTCTTTCTAATATTGGGAACCAAAAACACATTCCCTATATTATGATACATGACATTGAT
GCTTTGGCGTCACAAGAAAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCCTA
AATAAGACAAAAATGAATACTCACACTAATCCACATTCTTTTCTAGATTAGGCACCATAAACATA
GTCTTCTAATAGGGATACATGATATTGATGCTATGGTTTCGCAAGAAACGCTTTCTTCCAACCAA
TTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
CATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATACTGATGGTTTTCT
TTTGCCTGGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGAACTCTAAATGAGAC
AAGCAATCATTCTCGTAAAAGTCTCCATTCGTTCCAAGATTGGGAACCAAAAACACATTCCTCAT
ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAAAGCCAAAG
TTTGTCTCTTAAATAAGGCAAACTTGAATACTCATAGTAATCCCCATTATTTTCAGGATTCGGCA
CCATAAACAGAGTCTTCTTATACGGATACAG
Found at i:28146 original size:159 final size:158
Alignment explanation
Indices: 27506--29691 Score: 776
Period size: 159 Copynumber: 13.8 Consensus size: 158
27496 ATAAACTTGA
* ** * **
27506 ATAAAATCAAAGTTTGTACTTCAAATGAGACATGCATTGATTC-CTATAAGAGTCTCTGTTCTTT
1 ATAAAATCAAAGTTTGTACTTTAAATGAGACAAACA-TGATTCTC-ATAAAAGTCTCCATTCTTT
* * * * *
27570 TCAAGATTGGGAACCAAAAACACATTCCGTTCATTAGGATATATGACATTGATGCTTTGGTGTCT
64 TCAAGATTAGGAACCATAAACACATTCCCTTCATTAGGATACATGATATTGATGCTTTGGTGT-T
* * *
27635 -CAAGAAAAGCTGTT-TTCCTCACCATTATTG
128 GCAAGAAAAGCTTTTCTTTC-CACCGTTATTG
* * * ** * *
27665 ATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAATATGAATAGTCATACTAA-TC-CACTTTCT
1 ATAAAATCAAAGTTTGTACT-TTAAATGAGACAAACATG-ATTCTCATA-AAAGTCTC-CATTCT
* * * * * * * *
27727 TTTCTAGATTGGGCACCATAAACATACT-CTTCTCATAAGGATACATGATACTGATGCTTTGGT-
62 TTTCAAGATTAGGAACCATAAACACATTCCCT-TCATTAGGATACATGATATTGATGCTTTGGTG
* * * *
27790 TT-CATAAAAAATG-GTTTCTTCCCACTAAGTT-TTG
126 TTGCA-AGAAAA-GCTTTTCTTTCCAC--CGTTATTG
* ** * * * * *
27824 -TAAAGT-ATAAGTTCATTCCTCAAATGAGACAAACATGGATTCT-AGTAAATA-TCTTCATTCA
1 ATAAAATCA-AAGTTTGTACTTTAAATGAGACAAACAT-GATTCTCA-TAAA-AGTCTCCATTCT
** * * * * * * **
27885 TTTCGTGATTAGGCACTATAAACACATTCTCC-GCTTTAGGATAAATGATATTGATGGTTTTCCT
62 TTTCAAGATTAGGAACCATAAACACATTC-CCTTCATTAGGATACATGATATTGAT-GCTTTGGT
* * * * *
27949 -TTGCATGGAAATCTTTTCTTT--GCC-TTATTTTCC
125 GTTGCAAGAAAAGCTTTTCTTTCCACCGTTA--TT-G
* **
27982 TTAAAATCAAAGTTTGTACTTTAAATGAGACATGCACTGATTCTCATAAAAGTCTCCATTCTTTT
1 ATAAAATCAAAGTTTGTACTTTAAATGAGACAAACA-TGATTCTCATAAAAGTCTCCATTCTTTT
* *
28047 CAAGATT-GCGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTG
65 CAAGATTAG-GAACCATAAACACATTCCCTTCATTAGGATACATGATATTGATGCTTTGGTGTTG
*
28111 CAAGAAAAGCTTTTCTTTCCAACGTTATTG
129 CAAGAAAAGCTTTTCTTTCCACCGTTATTG
* * * * *
28141 ATAAAATCAAAGTCTGT-CTCTTAAATAAGACAAACATGAATACTCCTACAAA-TCCCCATTCTT
1 ATAAAATCAAAGTTTGTACT-TTAAATGAGACAAACATG-ATTCTCATA-AAAGTCTCCATTCTT
** * * * ** ** * *
28204 TTC-AGTATTAGCCACCATAAACATAGT-CTTCTCAAAACAATACATGATATTAAGGCTTTGGT-
63 TTCAAG-ATTAGGAACCATAAACACATTCCCT-TCATTAGGATACATGATATTGATGCTTTGGTG
* *
28266 TTCGTAAGAAATGC-TTTC-TTCCTACCAAGTT-TTG
126 TT-GCAAGAAAAGCTTTTCTTTCC-ACC--GTTATTG
* * ** * * * *
28300 -TAAAGT-ATGAG-TTCAATCCTCAAATGAGACAAACATGGATTCT-AGT-AAGGATCTTCATT-
1 ATAAAATCA-AAGTTTGTA-CTTTAAATGAGACAAACAT-GATTCTCA-TAAAAG-TCTCCATTC
*** * * * * * **
28359 TATTTTGTGATTAGGTACTATAAATACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTTC
61 T-TTTCAAGATTAGGAACCATAAACACATTC-CCTTCATTAGGATACATGATATTGATGCTTTGG
* * * **
28423 TTTTGCATAG-AAATCTTTTCTTTGCC-TCGATT-TCC
124 TGTTGCA-AGAAAAGCTTTTCTTT-CCACCG-TTATTG
* * * ** *
28458 TTAAAATCAAAGTTTGTGCTTTAAATAAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTT
1 ATAAAATCAAAGTTTGTACTTTAAATGAGACAAACA-TGATTCTCATAAAAGTCTCCATTCTTTT
* * * * * **
28522 CTAATATTGGGAACCA-AGAACACATTCCCTTTATTAGGATGCATGACATTGACACTTTGGTG-T
65 C-AAGATTAGGAACCATA-AACACATTCCCTTCATTAGGATACATGATATTGATGCTTTGGTGTT
* * * *
28585 CCTAAGAGAAGCTTTTCTTTCCACCATTATTA
128 GC-AAGAAAAGCTTTTCTTTCCACCGTTATTG
* * * ** * * * *
28617 ATAGAATCAAAGTTTAT-CTCTTAAATAAGGTAAACATAAATACTCGTACTAA-TC-CGCATTCT
1 ATAAAATCAAAGTTTGTACT-TTAAATGAGACAAACAT-GATTCTCATA-AAAGTCTC-CATTCT
* * * *
28679 TTTCAAGATTA-GACACCTTAAACATAGT--CTTCTAATAAGGATACATGATATTGATGCTTTGG
62 TTTCAAGATTAGGA-ACCATAAACACATTCCCTTC--ATTAGGATACATGATATTGATGCTTTGG
* *
28741 T-TT-CTTAGGAAACA-C-TTTCTTCCCACCAAGTT-TTG
124 TGTTGC--AAGAAA-AGCTTTTCTTTCCACC--GTTATTG
* * * * * ** ** * *
28776 -TAAATTCTAAGTTCGTGCTTCAAATGAGACAGGCATGGATTC-CAGCAAGGATCTTCATT-TAT
1 ATAAAATCAAAGTTTGTACTTTAAATGAGACAAACAT-GATTCTCATAAAAG-TCTCCATTCT-T
* * * * * * * ** *
28838 TTCATGATTAGGCACTATAAGCACATTCTCC-TCATTAGGATAAAAGATATTGATGGTTTTCTTT
63 TTCAAGATTAGGAACCATAAACACATTC-CCTTCATTAGGATACATGATATTGATGCTTTGGTGT
* ** **
28902 TGCATAG-AAATCTTTTCTTTGCC-TTGCTT-TCC
127 TGCA-AGAAAAGCTTTTCTTT-CCACCG-TTATTG
* * *
28934 TTAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATTCTCGTAAAAGTCTCCATTCTTTT
1 ATAAAATCAAAGTTTGTACTTTAAATGAGACAAACA-TGATTCTCATAAAAGTCTCCATTCTTTT
* * * * * *
28999 CAAGAATAGGAACCAAAAACACATTCCTTTCATTAGGATATATGACATTGATGCTTTGGTGTCGC
65 CAAGATTAGGAACCATAAACACATTCCCTTCATTAGGATACATGATATTGATGCTTTGGTGTTGC
* *
29064 AAGAGAAGCTTGTT-TTTCCACCGATATTG
130 AAGAAAAGCTT-TTCTTTCCACCGTTATTG
* * * *
29093 ATAAAATCAAAG-TTGT-CTCTTAAAT-AGGACAAACATAAATACTCATACTAA-TCCCCATTCT
1 ATAAAATCAAAGTTTGTACT-TTAAATGA-GACAAACAT-GATTCTCATA-AAAGTCTCCATTCT
* * * * * ** *
29154 TTTCTAGATTAGGCACCATAAACATAGTCTTCTT-ATGCGGATACATGATATTGATGCTTTGGTT
62 TTTCAAGATTAGGAACCATAAACACATTC-CCTTCATTAGGATACATGATATTGATGCTTTGGTG
* * * *
29218 TTGCAAGATACA-C-TTTCGTCCCACCAATT-TGTG
126 TTGCAAGA-AAAGCTTTTCTTTCCACC-GTTAT-TG
* * * * * * * * *
29251 -TAAATTCTAAGTTCGTGCCTCAAATGAGATAAACATGGATTCT-AGT-AAGGATCTTCATT-TA
1 ATAAAATCAAAGTTTGTACTTTAAATGAGACAAACAT-GATTCTCA-TAAAAG-TCTCCATTCT-
* * * * * ** *
29312 TTTCAAGATTAGGCACTATAAACACATTCTCC-TCATCAGGATGCATGATATTGATGGTTTTCTT
62 TTTCAAGATTAGGAACCATAAACACATTC-CCTTCATTAGGATACATGATATTGATGCTTTGGTG
* * * * *
29376 TTGCATGGAAATCTTTTCTTT--GCC-TTATTTTCC
126 TTGCAAGAAAAGCTTTTCTTTCCACCGTTA--TT-G
* * * * ** * * * *
29409 ATAAAATCATAGTTTGCACTTTAACTGAAACATGCATTGATTCTCGTGACAA-TATCCATCCTTT
1 ATAAAATCAAAGTTTGTACTTTAAATGAGACAAACA-TGATTCTCAT-AAAAGTCTCCATTCTTT
* * ** * * * *
29473 TCAAGGTTAGGAACCAAAAACACACACCTTTCATTAGGATACATGACATTGCTGCTTTGGTGTCG
64 TCAAGATTAGGAACCATAAACACATTCCCTTCATTAGGATACATGATATTGATGCTTTGGTGTTG
* **
29538 CAAGAGAAGCTTGCCTTTCCACCGTTATTG
129 CAAGAAAAGCTTTTCTTTCCACCGTTATTG
* * * * * * *
29568 ATAGAATCAAAG-TTGT-CTCTTAAATAAAACAAACATGAATACTCACACTAA-TCCCCATTCTT
1 ATAAAATCAAAGTTTGTACT-TTAAATGAGACAAACATG-ATTCTCATA-AAAGTCTCCATTCTT
* * * ** *
29630 TTCAGGATTAGGCACCATAAACATAGTTTTCTT-A-TACGGAAACATGATATTGATGCTTTGGT
63 TTCAAGATTAGGAACCATAAACACA-TTCCCTTCATTA-GGATACATGATATTGATGCTTTGGT
29692 TTCACAAGAT
Statistics
Matches: 1452, Mismatches: 420, Indels: 311
0.67 0.19 0.14
Matches are distributed among these distances:
154 2 0.00
155 2 0.00
156 6 0.00
157 60 0.04
158 569 0.39
159 744 0.51
160 56 0.04
161 7 0.00
162 6 0.00
ACGTcount: A:0.32, C:0.19, G:0.14, T:0.36
Consensus pattern (158 bp):
ATAAAATCAAAGTTTGTACTTTAAATGAGACAAACATGATTCTCATAAAAGTCTCCATTCTTTTC
AAGATTAGGAACCATAAACACATTCCCTTCATTAGGATACATGATATTGATGCTTTGGTGTTGCA
AGAAAAGCTTTTCTTTCCACCGTTATTG
Found at i:29364 original size:475 final size:474
Alignment explanation
Indices: 27507--29729 Score: 2905
Period size: 476 Copynumber: 4.7 Consensus size: 474
27497 TAAACTTGAA
* **
27507 TAAAATCAAAGTTTGTACTTCAAATGAGACATGCATTGATTC-C-TATAAGAGTCTCTGTTCTTT
1 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTA-AA-AGTCTCCATTCTTT
* * * *
27570 TCAAGATTGGGAACCAAAAACACATTCCGTTCATTAGGATATATGACATTGATGCTTTGGTGTCT
64 TCAAGATTAGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
* *
27635 CAAGAAAAGC-TGTTTTCCTCACC-ATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAA
129 CAAGAGAAGCTTGTTTTTC-CACCGA-TATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAA
* * * * * * *
27698 ATATGAATAGTCATACTAATCCACTTTCTTTTCTAGATTGGGCACCATAAACATACTCTTCTCAT
191 ACATGAATACTCATACTAATCCCCATTCTTTTC-AGATTAGGCACCATAAACATAGTCTTCTAAT
* * * * * *
27763 AAGGATACATGATACTGATGCTTTGGTTTCATAAAAAATGGTTTCTTCCCACTAAGTTTTGTAAA
255 ACGGATACATGATATTGATGCTTTGGTTTCATAAGAAACGCTTTCTTCCCACCAAGTTTTGTAAA
* ** * *
27828 GTATAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAATATCTTCATTCATTTCGTGA
320 GTATAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTTATTTCATGA
* * * *
27893 TTAGGCACTATAAACACATTCTCCGCTTTAGGATAAATGATATTGATGGTTTTCCTTTGCATGGA
385 TTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATAGA
27958 AATCTTTTCTTTGCCTTATTTTCCT
450 AATCTTTTCTTTGCCTTATTTTCCT
* *
27983 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCACTGATTCTCATAAAAGTCTCCATTCTTTTC
1 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* *
28048 AAGATT-GCGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGC
66 AAGATTAG-GAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
* * * *
28112 AAGAAAAGCTT-TTCTTTCCAACGTTATTGATAAAATCAAAGTCTGTCTCTTAAATAAGACAAAC
130 AAGAGAAGCTTGTT-TTTCCACCGATATTGATAGAATCAAAGT-TGTCTCTTAAATAAGACAAAC
* * * *
28176 ATGAATACTCCTACAAATCCCCATTCTTTTCAGTATTAGCCACCATAAACATAGTCTTCTCAAAA
193 ATGAATACTCATACTAATCCCCATTCTTTTCAG-ATTAGGCACCATAAACATAGTCTTCT-AATA
* * * * * *
28241 C-AATACATGATATTAAGGCTTTGGTTTCGTAAGAAATGCTTTCTTCCTACCAAGTTTTGTAAAG
256 CGGATACATGATATTGATGCTTTGGTTTCATAAGAAACGCTTTCTTCCCACCAAGTTTTGTAAAG
* **
28305 TATGAGTTCAAT-CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTTATTTTGTGA
321 TATAAGTTC-ATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTTATTTCATGA
* *
28369 TTAGGTACTATAAATACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATAGA
385 TTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATAGA
*
28434 AATCTTTTCTTTGCCTCGA-TTTCCT
450 AATCTTTTCTTTGCCT-TATTTTCCT
* *
28459 TAAAATCAAAGTTTGTGCTTTAAATAAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTC
1 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* * * * **
28523 TAATATTGGGAACCAAGAACACATTCCCTTT-ATTAGGATGCATGACATTGACACTTTGGTGTC-
66 -AAGATTAGGAACCAAAAACACATT-CCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
* * **
28586 CTAAGAGAAGCTT-TTCTTTCCACC-ATTATTAATAGAATCAAAGTTTATCTCTTAAATAAGGTA
129 C-AAGAGAAGCTTGTT-TTTCCACCGA-TATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACA
* * * * *
28649 AACATAAATACTCGTACTAATCCGCATTCTTTTCAAGATTAGACACCTTAAACATAGTCTTCTAA
190 AACATGAATACTCATACTAATCCCCATTCTTTTC-AGATTAGGCACCATAAACATAGTCTTCTAA
* * * *
28714 TAAGGATACATGATATTGATGCTTTGGTTTCTTAGGAAACACTTTCTTCCCACCAAGTTTTGTAA
254 TACGGATACATGATATTGATGCTTTGGTTTCATAAGAAACGCTTTCTTCCCACCAAGTTTTGTAA
* * * * ** * *
28779 ATTCTAAGTTCGTGCTTCAAATGAGACAGGCATGGATTCCAGCAAGGATCTTCATTTATTTCATG
319 AGTATAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTTATTTCATG
* *
28844 ATTAGGCACTATAAGCACATTCTCCTCATTAGGATAAAAGATATTGATGGTTTTCTTTTGCATAG
384 ATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATAG
**
28909 AAATCTTTTCTTTGCCTTGCTTTCCT
449 AAATCTTTTCTTTGCCTTATTTTCCT
*
28935 TAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATTCTCGTAAAAGTCTCCATTCTTTTC
1 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* *
29000 AAGAATAGGAACCAAAAACACATTCCTTTCATTAGGATATATGACATTGATGCTTTGGTGTCGCA
66 AAGATTAGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* * *
29065 AGAGAAGCTTGTTTTTCCACCGATATTGATAAAATCAAAGTTGTCTCTTAAATAGGACAAACATA
131 AGAGAAGCTTGTTTTTCCACCGATATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATG
* *
29130 AATACTCATACTAATCCCCATTCTTTTCTAGATTAGGCACCATAAACATAGTCTTCTTATGCGGA
196 AATACTCATACTAATCCCCATTCTTTTC-AGATTAGGCACCATAAACATAGTCTTCTAATACGGA
*** * * * * *
29195 TACATGATATTGATGCTTTGGTTTTGCAAGATACACTTTCGTCCCACCAA-TTTGTGTAAATTCT
260 TACATGATATTGATGCTTTGGTTTCATAAGAAACGCTTTCTTCCCACCAAGTTT-TGTAAAGTAT
* * *
29259 AAGTTCGTGCCTCAAATGAGATAAACATGGATTCTAGTAAGGATCTTCATTTATTTCAAGATTAG
324 AAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTTATTTCATGATTAG
* ** *
29324 GCACTATAAACACATTCTCCTCATCAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATC
389 GCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATAGAAATC
*
29389 TTTTCTTTGCCTTATTTTCCA
454 TTTTCTTTGCCTTATTTTCCT
* * * * * * *
29410 TAAAATCATAGTTTGCACTTTAACTGAAACATGCATTGATTCTCGTGACAA-TATCCATCCTTTT
1 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGT-AAAAGTCTCCATTCTTTT
* ** *
29474 CAAGGTTAGGAACCAAAAACACACACCTTTCATTAGGATACATGACATTGCTGCTTTGGTGTCGC
65 CAAGATTAGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
** * *
29539 AAGAGAAGCTTGCCTTTCCACCGTTATTGATAGAATCAAAGTTGTCTCTTAAATAAAACAAACAT
130 AAGAGAAGCTTGTTTTTCCACCGATATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACAT
* * *
29604 GAATACTCACACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTTTTCTTATACGG
195 GAATACTCATACTAATCCCCATTCTTTTCA-GATTAGGCACCATAAACATAGTCTTCTAATACGG
* * *
29669 AAACATGATATTGATGCTTTGGTTTCACAAGATACGCTTTCTTCCCACCAA-TTTGTGTAAA
259 ATACATGATATTGATGCTTTGGTTTCATAAGAAACGCTTTCTTCCCACCAAGTTT-TGTAAA
29730 ACATTCTCCT
Statistics
Matches: 1545, Mismatches: 173, Indels: 59
0.87 0.10 0.03
Matches are distributed among these distances:
474 4 0.00
475 570 0.37
476 941 0.61
477 28 0.02
478 2 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (474 bp):
TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
AAGATTAGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
AGAGAAGCTTGTTTTTCCACCGATATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATG
AATACTCATACTAATCCCCATTCTTTTCAGATTAGGCACCATAAACATAGTCTTCTAATACGGAT
ACATGATATTGATGCTTTGGTTTCATAAGAAACGCTTTCTTCCCACCAAGTTTTGTAAAGTATAA
GTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTTATTTCATGATTAGGC
ACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATAGAAATCTT
TTCTTTGCCTTATTTTCCT
Found at i:30074 original size:395 final size:396
Alignment explanation
Indices: 29330--30124 Score: 1236
Period size: 395 Copynumber: 2.0 Consensus size: 396
29320 TTAGGCACTA
** * *
29330 TAAACACATTCTCCTCATCAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
1 TAAACACATTCTCCTCATCAGGATAAAAGATATTGATGGTTTTCTTTTGCATAGAAATCTTTTCT
* * * ** *
29395 TTGCCTTATTTTCCATAAAATCATAGTTTGCACTTTAACTGAAACATGCATTGATTCTCGTGACA
66 TTGCCTTACTTTCCATAAAATCAAAGTTTGAACTTTAAAAGAAACATGCATTGATTCTCGTGAAA
* *
29460 ATATCCATCCTTTTCAAGGTTAGGAACCAAAAACACACACCTTTCATTAGGATACATGACATTGC
131 ATATCCATCCTTTTCAAGATTAGGAACCAAAAACACACACCTTTCATTAGGATACATGACATTGA
*
29525 TGCTTTGGTGTCGCAAGAGAAGCTTGCCTTTCCACCGTTATTGATAGAATCAAAGTTGTCTCTTA
196 TGCTTTGGTGTCGCAAGAGAAGCTTGCCTTTCCACCGTTATTGATAGAATCAAAGTAGTCTCTTA
*
29590 AATAAAACAAACATGAATACTCACACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
261 AATAAAACAAACATGAATACTCACACTAATCCCCATCCTTTTCAGGATTAGGCACCATAAACATA
* *
29655 GTTTTCTTATACGGAAACATGATATTGATGCTTTGGTTTCACAAGATACGCTTTCTTCCCACCAA
326 GTCTTCTTATACGGAAACATGATATTGATGCTTTGGTTTCACAAGATACGCTTTCGTCCCACCAA
29720 TTTGTG
391 TTTGTG
*
29726 TAAA-ACATTCTCCTCA-CTAGGATAAAAGATATTGATGGTTTTCTTTTGTATAGAAATCTTTTC
1 TAAACACATTCTCCTCATC-AGGATAAAAGATATTGATGGTTTTCTTTTGCATAGAAATCTTTTC
*
29789 TTTGCCTTACTTTCCTTAAAATCAAAGTTTGAACTTTAAAAGAAACATGCATTGATTCTCGT-AA
65 TTTGCCTTACTTTCCATAAAATCAAAGTTTGAACTTTAAAAGAAACATGCATTGATTCTCGTGAA
* * **
29853 AAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATT
130 AA-TATCCATCCTTTTCAAGATTAGGAACCAAAAACACACACCTTTCATTAGGATACATGACATT
* * * *
29918 GATGCTTTGGTGTCGTAAGAGAAGCTTGTCTTTCCACTGTTATTGATGGAATCAAAGTAGTCTCT
194 GATGCTTTGGTGTCGCAAGAGAAGCTTGCCTTTCCACCGTTATTGATAGAATCAAAGTAGTCTCT
** * *
29983 TAAATAGGACAAACATGAATACTCATACTAATCCCCATCCTTTTCGGGATTAGGCACCATAAACA
259 TAAATAAAACAAACATGAATACTCACACTAATCCCCATCCTTTTCAGGATTAGGCACCATAAACA
* * * **
30048 TAGTCTTCTTATGCGGATATATGATATTGATGCTTTGGTTTTGCAAGATACGCTTTCGTCCCACC
324 TAGTCTTCTTATACGGAAACATGATATTGATGCTTTGGTTTCACAAGATACGCTTTCGTCCCACC
30113 AATTTGTG
389 AATTTGTG
30121 TAAA
1 TAAA
30125 TTCTAAGTTC
Statistics
Matches: 362, Mismatches: 35, Indels: 5
0.90 0.09 0.01
Matches are distributed among these distances:
394 4 0.01
395 354 0.98
396 4 0.01
ACGTcount: A:0.30, C:0.20, G:0.15, T:0.35
Consensus pattern (396 bp):
TAAACACATTCTCCTCATCAGGATAAAAGATATTGATGGTTTTCTTTTGCATAGAAATCTTTTCT
TTGCCTTACTTTCCATAAAATCAAAGTTTGAACTTTAAAAGAAACATGCATTGATTCTCGTGAAA
ATATCCATCCTTTTCAAGATTAGGAACCAAAAACACACACCTTTCATTAGGATACATGACATTGA
TGCTTTGGTGTCGCAAGAGAAGCTTGCCTTTCCACCGTTATTGATAGAATCAAAGTAGTCTCTTA
AATAAAACAAACATGAATACTCACACTAATCCCCATCCTTTTCAGGATTAGGCACCATAAACATA
GTCTTCTTATACGGAAACATGATATTGATGCTTTGGTTTCACAAGATACGCTTTCGTCCCACCAA
TTTGTG
Found at i:30462 original size:159 final size:158
Alignment explanation
Indices: 29807--32372 Score: 589
Period size: 158 Copynumber: 16.2 Consensus size: 158
29797 ACTTTCCTTA
* * ** * * *
29807 AAATCAAAGTTTGAACT-TTAAAAGAAACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
1 AAATCAAAGTTTG-TCTCTTAAATGAAACAAACATTGATTCTCGTAACAGTCTCCATCCATTTCA
* * * *
29871 AGATTAGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAA
65 AGATTAGGAACCATAAACACATTCCTCTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAA
*
29936 GAGAAGCTTGTCTTTCC-ACTGTTATTGATG
130 GAGAAGCTTGTCTTTCCAAAT-TT-TTGATG
* * * * * * * *
29966 GAATCAAAG-TAGTCTCTTAAAT-AGGACAAACA-TGAATACTCAT-ACTAATCCCCATCCTTTT
1 AAATCAAAGTTTGTCTCTTAAATGA-AACAAACATTG-ATTCTCGTAAC-AGTCTCCATCCATTT
** * * * * * ** * * *
30027 CGGGATTAGGCACCATAAACATAGTCTTCTTATGCGGATATATGATATTGATGCTTTGGTTTTGC
63 CAAGATTAGGAACCATAAACACATTCCTCTCATTAGGATACATGACATTGATGCTTTGGTGTTGC
* * * * *
30092 AAGATACGCTT-TCGTCCCACCAATTTGTG-T-
128 AAGAGAAGCTTGTCTTTCCA--AATTTTTGATG
* * * * * * ** **
30122 AAATTCTAAGTTCGTGC-CTCAAATGAAACAAACATGGATTCTAGTAA-GGATCTTTATTTATTT
1 AAA-TCAAAGTTTGT-CTCTTAAATGAAACAAACATTGATTCTCGTAACAG-TCTCCATCCATTT
* * * * * * ** *
30185 CAAGATTAGGCACTATAAACACATT-CTCCTCATCAGGATGCATGATATTGATGGTTTTCTTTTG
63 CAAGATTAGGAACCATAAACACATTCCT-CTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * * ** ** *
30249 CATG-GAAATCTTTTCTTTGCCTTATTTTCCATA
127 CAAGAG-AAGCTTGTCTTT-CCAAATTTTTGATG
* * **
30282 AAATCATAGTTTG-CACTTTAAATGAAACATGCATTGATTCTCGTAACAGTCTCCATCCATTTCA
1 AAATCAAAGTTTGTCTC-TTAAATGAAACAAACATTGATTCTCGTAACAGTCTCCATCCATTTCA
* *
30346 AGATTAGGAACCA-AAAGCACATTCCTCTCATTAGGATACATGACAATGTTGCTTTGGTGTTGCA
65 AGATTAGGAACCATAAA-CACATTCCTCTCATTAGGATACATGACATTGATGCTTTGGTGTTGCA
30410 AGAGAAGCTTGTCTTTCCAAATTTATTGATG
129 AGAGAAGCTTGTCTTTCCAAATTT-TTGATG
* * * * * * *
30441 GAATCAAAGTTTGTCTCTTAAAT-AAACAAACA-GGAATACTCAT-ACTAATC-CACATTCTTTT
1 AAATCAAAGTTTGTCTCTTAAATGAAACAAACATTG-ATTCTCGTAAC-AGTCTC-CATCCATTT
* * * ** * *
30502 CCAGATTAGGCACCA-AAAAACATAGTATTCTCATAAGGATACATGATATTGATGCTTTGGT-TT
63 CAAGATTAGGAACCATAAACACAT--TCCTCTCATTAGGATACATGACATTGATGCTTTGGTGTT
* * * *
30565 CGCAAGA-AA-CGTTTTCTTCCCCCCAACTTTTG-T-
126 -GCAAGAGAAGC-TTGTCTT--TCCAAATTTTTGATG
* * * * * * * *
30598 AAAGT-ATCACTTCAT-TC-CTCAAATTAAACAAACATGGATTCTAGTAAC-GATCTTCATTCAT
1 AAA-TCA-AAGTT--TGTCTCTTAAATGAAACAAACATTGATTCTCGTAACAG-TCTCCATCCAT
** * * * ** * ** *
30659 TTCGTGATTAGGCACTATAAACACATT-CTCCTCATTAGGATAAATG-GTTTGATGGTTTTCTTT
61 TTCAAGATTAGGAACCATAAACACATTCCT-CTCATTAGGATACATGACATTGATGCTTTGGTGT
* * * * *
30722 TGCATCGA-AATCTTTTCTTTGCC---TTGTTCTCATTA
125 TGCA-AGAGAAGCTTGTCTTT-CCAAATT-TT-TGA-TG
* * ** * *
30757 AAATAAAAGTTTGTACT-TTAAATGAGACATTCATTGATTCTCATAAAAGTCTCCA-CTC-TTTC
1 AAATCAAAGTTTGT-CTCTTAAATGAAACAAACATTGATTCTCGTAACAGTCTCCATC-CATTT-
* * * * *
30819 CAAGAATAGGATCCAAAAACACTTTCC-CTTCATTAGGATACATGACATTGGTGCTTTGGTGTTG
63 CAAGATTAGGAACCATAAACACATTCCTC-TCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * ** ***
30883 CGAGAGAAGCTTTTCTTTCCACCGTGAATGATG
127 CAAGAGAAGCTTGTCTTTCCA-AATTTTTGATG
* * * * * * *
30916 AAATCAAAGTTTATCTCTTAAAT-AAGACAAACA-TGAATGCTCAT-ACTAATCCCCATTCTTTT
1 AAATCAAAGTTTGTCTCTTAAATGAA-ACAAACATTG-ATTCTCGTAAC-AGTCTCCATCCATTT
* * * * * * * * * *
30978 CAGGATTAGGCACCATAAACATAATCTTATCATAAGGATACAAGATATTGATGATTTGGT-TTCG
63 CAAGATTAGGAACCATAAACACATTCCTCTCATTAGGATACATGACATTGATGCTTTGGTGTT-G
*
31042 CAAGA-AATGCTT-T-TTTCCCATCAATTTTAG-T-
127 CAAGAGAA-GCTTGTCTTT-CCA--AATTTTTGATG
* * * * * * * *
31073 AAATTCTAAGTTCGTGC-CTCAAATGAGACAAACATTGATTCTAGTAA-GGATCTTCATTCATTT
1 AAA-TCAAAGTTTGT-CTCTTAAATGAAACAAACATTGATTCTCGTAACAG-TCTCCATCCATTT
** * * * * * * * * ** *
31136 CTTGACTAGGCACTATAAACACATT-CTCCTCGTCAGGATGCATGATATTGATGGTTTTCTTTTG
63 CAAGATTAGGAACCATAAACACATTCCT-CTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * * * ** ** *
31200 CATGAAAATCTTTTCTTTGCCTTATTTTCCATA
127 CAAGAGAAGCTTGTCTTT-CCAAATTTTTGATG
* * * ** * * *
31233 AAATCAAAGTGTG-CACTTTAAATGAGACATGCATTGATTCTCGTGACAGTCTCCATTCTTTTCA
1 AAATCAAAGTTTGTCTC-TTAAATGAAACAAACATTGATTCTCGTAACAGTCTCCATCCATTTCA
* * * * * *
31297 AGATTAGAAACCAAAAACACATCCCTTTCATTAGGATACATGACATTAAAGCTTTGGTGTTGCAA
65 AGATTAGGAACCATAAACACATTCCTCTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAA
* * **
31362 GAGAAGCTTGTATTTTCGC-CATTACTGAT-
130 GAGAAGCTTGT-CTTTC-CAAATTTTTGATG
* * ** * * *
31391 AGAATCAAAGTTT-TCTCTTAAAT-AAGACAAACA-TGAATACTCAT-ACTAAACCCCATTCTTT
1 A-AATCAAAGTTTGTCTCTTAAATGAA-ACAAACATTG-ATTCTCGTAAC-AGTCTCCATCCATT
** * * ** * * * * * *
31452 TCTGGATTAGGCATCATAAACTTAGTCTTCTTA-CACGGATACATGATATTGATGCTTTGGTGTC
62 TCAAGATTAGGAACCATAAACACATTCCTCTCATTA-GGATACATGACATTGATGCTTTGGTGTT
* * * *
31516 GCAAGATATGCTT-T-TGTCCCACCAATTTGTG-T-
126 GCAAGAGAAGCTTGTCT-TTCCA--AATTTTTGATG
* * * * * * * * *
31548 AAATTCTAAGTTCGT-TCCTCAAATGAGACAAACATGGATTCTAGTAA-GGATCTTCATTCATTT
1 AAA-TCAAAGTTTGTCT-CTTAAATGAAACAAACATTGATTCTCGTAACAG-TCTCCATCCATTT
* * * * * * * * ** *
31611 CATGATTAGGCACTATAAACAC--T-CTACTCATCAGGATGCATAATATTGATGGTTTTCTTTTG
63 CAAGATTAGGAACCATAAACACATTCCT-CTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * * ** **
31673 CATG-GAAATCTTTTCTTTGCCTTATTTTCCAT-
127 CAAGAG-AAGCTTGTCTTT-CCAAATTTTTGATG
* * * * ** * *
31705 AATATCAAAGTTT-CCACAGTAAATGAGACATCCATTGATTCTCGTAACAGTC-CCATTCTTTTC
1 AA-ATCAAAGTTTGTCTC-TTAAATGAAACAAACATTGATTCTCGTAACAGTCTCCATCCATTTC
* * * * * *
31768 AAGATTAGGAACGAAAAACACATTCCTTTCATTAGTATACATGACATTGACGCTTTGGTGTCGCA
64 AAGATTAGGAACCATAAACACATTCCTCTCATTAGGATACATGACATTGATGCTTTGGTGTTGCA
* ** *
31833 AGAAAAGCTTGTCTTTCCATCGTTATTGAT-
129 AGAGAAGCTTGTCTTTCCA-AATTTTTGATG
* * * * * *
31863 AGAATCAAAG-TTGTCTCTTAAAT-AAGACAAACA-TGAGTACTCAT-ACTAATCCCCATTCTTT
1 A-AATCAAAGTTTGTCTCTTAAATGAA-ACAAACATTGA-TTCTCGTAAC-AGTCTCCATCCATT
* * * * * * * * * *
31924 TTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATAATGATGCTTTGGT-TTC
62 TCAAGATTAGGAACCATAAACACATTCCTCTCATTAGGATACATGACATTGATGCTTTGGTGTT-
* * * * *
31988 ACAAGATATGCTT-TCTTCCCACCAATTTGTG-T-
126 GCAAGAGAAGCTTGTCTTTCCA--AATTTTTGATG
* * ** * * * ** ** * *
32020 AAATTATGAGTTCAT-TGCTCAAATGAGACAAACATGGATTC-CTGT-AGGGATCTTTATTCGTT
1 AAATCA-AAGTTTGTCT-CTTAAATGAAACAAACATTGATTCTC-GTAACAG-TCTCCATCCATT
* ** * * * * * ** * ** *
32082 CCGTGATTAGGCACTATAAACACATT-CTCCGCTTTAGGATAAATGATGTTGATGGTTTTCTTTT
62 TCAAGATTAGGAACCATAAACACATTCCT-CTCATTAGGATACATGACATTGATGCTTTGGTGTT
* * * * ** *** *
32146 GCATGAAAATCTTTTCTTTGCCTTATTTTCCTTA
126 GCAAGAGAAGCTTGTCTTT-CCAAATTTTTGATG
* * *** * *
32180 AAATCAACGTTTGTGCT-TTAAATGAGACGTGCATTGATTCTCGTAA-AGGTCTCCATTCTTTTC
1 AAATCAAAGTTTGT-CTCTTAAATGAAACAAACATTGATTCTCGTAACA-GTCTCCATCCATTTC
* * * * *
32243 AAGATT-GTGAACCAAAAATACATTCC-CTTCATTAGGATACATGACATTAACGCTTTGGTGTCG
64 AAGATTAG-GAACCATAAACACATTCCTC-TCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * * * *
32306 CAAGAAAAGCTTTTCTTTCCAACGTTATTGATA
127 CAAGAGAAGCTTGTCTTTCCAA-ATTTTTGATG
32339 AAATCAAAGTTTG-CGTCTTAAAT-AAGACAAACAT
1 AAATCAAAGTTTGTC-TCTTAAATGAA-ACAAACAT
32373 GATATTGATG
Statistics
Matches: 1698, Mismatches: 541, Indels: 336
0.66 0.21 0.13
Matches are distributed among these distances:
154 1 0.00
155 5 0.00
156 82 0.05
157 154 0.09
158 797 0.47
159 595 0.35
160 62 0.04
161 1 0.00
162 1 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (158 bp):
AAATCAAAGTTTGTCTCTTAAATGAAACAAACATTGATTCTCGTAACAGTCTCCATCCATTTCAA
GATTAGGAACCATAAACACATTCCTCTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAG
AGAAGCTTGTCTTTCCAAATTTTTGATG
Found at i:30713 original size:475 final size:476
Alignment explanation
Indices: 29726--32374 Score: 3476
Period size: 475 Copynumber: 5.6 Consensus size: 476
29716 CCAATTTGTG
* * *
29726 TAAA-ACATTCTCCTCA-CTAGGATAAAAGATATTGATGGTTTTCTTTTGTATAGAAATCTTTTC
1 TAAACACATTCTCCTCATC-AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* * * * * *
29789 TTTGCCTTACTTTCCTTAAAATCAAAGTTTGAACTTTAAAAGAAACATGCATTGATTCTCGTAAA
65 TTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAC
*
29854 AGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTG
130 AGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTCTCATTAGGATACATGACATTG
* * *
29919 ATGCTTTGGTGTCGTAAGAGAAGCTTGTCTTTCC-ACTGTTATTGATGGAATCAAAG-TAGTCTC
195 ATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAAC-GTTATTGATAGAATCAAAGTTTGTCTC
* * **
29982 TTAAATAGGACAAACATGAATACTCATACTAATCCCCATCCTTTTCGGGATTAGGCACCATAAAC
259 TTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAAC
** * * * * *
30047 ATAGTCTTCTTATGCGGATATATGATATTGATGCTTTGGTTTTGCAAGATACGCTTTCGTCCCAC
324 ATAGTCTTCTTATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATATGTTTTCTTCCCAC
* * *
30112 CAATTTGTGTAAATTCTAAGTTCGTGCCTCAAATGAAACAAACATGGATTCTAGTAAGGATCTTT
389 CAATTTGTGTAAATTCTAAGTTCGTTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
* *
30177 ATTTATTTCAAGATTAGGCACTA
454 ATTCATTTCATGATTAGGCACTA
**
30200 TAAACACATTCTCCTCATCAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
1 TAAACACATTCTCCTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* *
30265 TTGCCTTATTTTCCATAAAATCATAGTTTGCACTTTAAATGAAACATGCATTGATTCTCGTAACA
66 TTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCGTAACA
* * * * *
30330 GTCTCCATCCATTTCAAGATTAGGAACCAAAAGCACATTCCTCTCATTAGGATACATGACAATGT
131 GTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTCTCATTAGGATACATGACATTGA
* ** *
30395 TGCTTTGGTGTTGCAAGAGAAGCTTGTCTTTCCAAATTTATTGATGGAATCAAAGTTTGTCTCTT
196 TGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAACGTTATTGATAGAATCAAAGTTTGTCTCTT
* * *
30460 AAATAA-ACAAACAGGAATACTCATACTAATCCACATTCTTTTCCAGATTAGGCACCAAAAAACA
261 AAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACC-ATAAACA
* * * * *
30524 TAGTATTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGTTTTCTTCCCCCC
325 TAGTCTTCTTATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATATGTTTTCTTCCCACC
* * * * * * * *
30589 AACTTT-TGTAAAGTATCACTTCATTCCTCAAATTAAACAAACATGGATTCTAGTAACGATCTTC
390 AA-TTTGTGTAAATTCTAAGTTCGTTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
*
30653 ATTCATTTCGTGATTAGGCACTA
454 ATTCATTTCATGATTAGGCACTA
* * *
30676 TAAACACATTCTCCTCATTAGGATAAATGGT-TTGATGGTTTTCTTTTGCATCGAAATCTTTTCT
1 TAAACACATTCTCCTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * * * * * *
30740 TTGCCTTGTTCT-CATTAAAATAAAAGTTTGTACTTTAAATGAGACATTCATTGATTCTCATAAA
66 TTGCCTTATTTTCCA-TAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAC
* * * * *
30804 AGTCTCCACTCTTTCCAAGAATAGGATCCAAAAACACTTTCC-CTTCATTAGGATACATGACATT
130 AGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTC-TCATTAGGATACATGACATT
* * * * * * * *
30868 GGTGCTTTGGTGTTGCGAGAGAAGCTTTTCTTTCCACCGTGAATGAT-GAAATCAAAGTTTATCT
194 GATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAACGTTATTGATAG-AATCAAAGTTTGTCT
*
30932 CTTAAATAAGACAAACATGAATGCTCATACTAATCCCCATTCTTTT-CAGGATTAGGCACCATAA
258 CTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAA
* * * * * *
30996 ACATAATCTTATCATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAATGCTTTT-TTCC
322 ACATAGTCTTCTTATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATATG-TTTTCTTCC
* * *
31060 CATCAATTT-TAGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATTGATTCTAGTAAGGAT
386 CACCAATTTGT-GTAAATTCTAAGTTCGTTCCTCAAATGAGACAAACATGGATTCTAGTAAGGAT
* *
31124 CTTCATTCATTTCTTGACTAGGCACTA
450 CTTCATTCATTTCATGATTAGGCACTA
* ** *
31151 TAAACACATTCTCCTCGTCAGGATGCATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCT
1 TAAACACATTCTCCTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* *
31216 TTGCCTTATTTTCCATAAAATCAAAGTGTGCACTTTAAATGAGACATGCATTGATTCTCGTGACA
66 TTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCGTAACA
* * * *
31281 GTCTCCATTCTTTTCAAGATTAGAAACCAAAAACACATCCCTTTCATTAGGATACATGACATTAA
131 GTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTCTCATTAGGATACATGACATTGA
* * * * ** * *
31346 AGCTTTGGTGTTGCAAGAGAAGCTTGTATTTTCGCCATTACTGATAGAATCAAAGTTT-TCTCTT
196 TGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAACGTTATTGATAGAATCAAAGTTTGTCTCTT
* ** * *
31410 AAATAAGACAAACATGAATACTCATACTAAACCCCATTCTTTTCTGGATTAGGCATCATAAACTT
261 AAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACAT
* * * *
31475 AGTCTTCTTACACGGATACATGATATTGATGCTTTGGTGTCGCAAGATATGCTTTT-GTCCCACC
326 AGTCTTCTTATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATATG-TTTTCTTCCCACC
31539 AATTTGTGTAAATTCTAAGTTCGTTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
390 AATTTGTGTAAATTCTAAGTTCGTTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
31604 TTCATTTCATGATTAGGCACTA
455 TTCATTTCATGATTAGGCACTA
* ** *
31626 TAAACAC--TCTACTCATCAGGATGCATAATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
1 TAAACACATTCTCCTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * ** *
31689 TTGCCTTATTTTCCATAATATCAAAGTTTCCACAGTAAATGAGACATCCATTGATTCTCGTAACA
66 TTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCGTAACA
* * *
31754 GTC-CCATTCTTTTCAAGATTAGGAACGAAAAACACATTCCTTTCATTAGTATACATGACATTGA
131 GTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTCTCATTAGGATACATGACATTGA
* * *
31818 CGCTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCATCGTTATTGATAGAATCAAAG-TTGTCTCTT
196 TGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAACGTTATTGATAGAATCAAAGTTTGTCTCTT
* *
31882 AAATAAGACAAACATGAGTACTCATACTAATCCCCATTCTTTT-TAGGATTAGGCACCATAAACA
261 AAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAAACA
* * *
31946 TAGTCTTCTTATAAGGATACATGATAATGATGCTTTGGTTTCACAAGATATGCTTTCTTCCCACC
325 TAGTCTTCTTATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATATGTTTTCTTCCCACC
* * * * * *
32011 AATTTGTGTAAATTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCCT-GTAGGGATCTTT
390 AATTTGTGTAAATTCTAAGTTCGTTCCTCAAATGAGACAAACATGGATT-CTAGTAAGGATCTTC
* * *
32075 ATTCGTTCCGTGATTAGGCACTA
454 ATTCATTTCATGATTAGGCACTA
* * * * *
32098 TAAACACATTCTCCGCTTTAGGATAAATGATGTTGATGGTTTTCTTTTGCATGAAAATCTTTTCT
1 TAAACACATTCTCCTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * ** *
32163 TTGCCTTATTTTCCTTAAAATCAACGTTTGTGCTTTAAATGAGACGTGCATTGATTCTCGTAA-A
66 TTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCGTAACA
*
32227 GGTCTCCATTCTTTTCAAGATT-GTGAACCAAAAATACATTCC-CTTCATTAGGATACATGACAT
131 -GTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACATTCCTC-TCATTAGGATACATGACAT
* * * * *
32290 TAACGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCAACGTTATTGATAAAATCAAAGTTTG-CG
193 TGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAACGTTATTGATAGAATCAAAGTTTGTC-
32354 TCTTAAATAAGACAAACATGA
257 TCTTAAATAAGACAAACATGA
32375 TATTGATGGT
Statistics
Matches: 1908, Mismatches: 236, Indels: 60
0.87 0.11 0.03
Matches are distributed among these distances:
471 6 0.00
472 301 0.16
473 116 0.06
474 116 0.06
475 931 0.49
476 432 0.23
477 6 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.36
Consensus pattern (476 bp):
TAAACACATTCTCCTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
TTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCGTAACA
GTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTCTCATTAGGATACATGACATTGA
TGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAACGTTATTGATAGAATCAAAGTTTGTCTCTT
AAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACAT
AGTCTTCTTATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATATGTTTTCTTCCCACCA
ATTTGTGTAAATTCTAAGTTCGTTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCAT
TCATTTCATGATTAGGCACTA
Found at i:31983 original size:158 final size:155
Alignment explanation
Indices: 29859--31993 Score: 732
Period size: 158 Copynumber: 13.5 Consensus size: 155
29849 GTAAAAGTCT
* * * * * *
29859 CCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTT-TCATTAGGATACATGACATTGATGC
1 CCATTCTTTTCAGGATTAGGCACCATAAACACAGT-CTTCTCATAAGGATACATGATATTGATGC
* * * * * *
29923 TTTGGTGTCGTAAGAGAAGCTTGTCTTTCCA-CTGTTATTGATGGAATCAAAGTAGTCTCTTAAA
65 TTTGGTGTCGCAAGAAAAGCTTTTCTTTCCATC-ATT-TTGAT-AAATCAAAGTTGTCTCTTAAA
29987 T-AGGACAAACATGAATACTCATACTAATCC
127 TGA-GACAAACATG-ATACTCATACTAATCC
* * * * ** *
30017 CCATCCTTTTCGGGATTAGGCACCATAAACATAGTCTTCTTATGCGGATATATGATATTGATGCT
1 CCATTCTTTTCAGGATTAGGCACCATAAACACAGTCTTCTCATAAGGATACATGATATTGATGCT
* * * * * * * * *
30082 TTGGTTTTGCAAGATACGC-TTTCGTCCCACCAATTTGTG-TAAATTCTAAGTTCGTGC-CTCAA
66 TTGGTGTCGCAAGAAAAGCTTTTCTTTCCATC-ATTT-TGATAAA-TCAAAGTT-GT-CTCTTAA
* * *** *
30144 ATGAAACAAACATGGATTCT-AGTAAGGATCT
126 ATGAGACAAACAT-GATACTCA-TACTAATCC
** * * * * * * *
30175 TTATT-TATTTCAAGATTAGGCACTATAAACACATTCTCCTCATCAGGATGCATGATATTGATGG
1 CCATTCT-TTTCAGGATTAGGCACCATAAACACAGTCTTCTCATAAGGATACATGATATTGATGC
** * * * * * * * * *
30239 TTTTCTTTTGCATGGAAATCTTTTCTTTGCC-TTATTTTCCATAAAATCATAGTT-TGCACTTTA
65 TTTGGTGTCGCAAGAAAAGCTTTTCTTT-CCATCATTTT-GAT-AAATCAAAGTTGT-CTC-TTA
* ** * * * *
30302 AATGAAACATGCATTGATTCTCGTAAC-AGTCT
125 AATGAGACAAACA-TGATACTCAT-ACTAATCC
* * * * * * * * * *
30334 CCATCCATTTCAAGATTAGGAACCA-AAAGCACATTCCTCTCATTAGGATACATGACAATGTTGC
1 CCATTCTTTTCAGGATTAGGCACCATAAA-CACAGTCTTCTCATAAGGATACATGATATTGATGC
* * * * *
30398 TTTGGTGTTGCAAGAGAAGCTTGTCTTTCCA-AATTTATTGATGGAATCAAAGTTTGTCTCTTAA
65 TTTGGTGTCGCAAGAAAAGCTTTTCTTTCCATCA-TT-TTGAT-AAATCAAAG-TTGTCTCTTAA
* *
30462 AT-AAACAAACAGGAATACTCATACTAATCC
126 ATGAGACAAACATG-ATACTCATACTAATCC
* * * *
30492 ACATTCTTTTCCA-GATTAGGCACCAAAAAACATAGTATTCTCATAAGGATACATGATATTGATG
1 CCATTCTTTT-CAGGATTAGGCACC-ATAAACACAGTCTTCTCATAAGGATACATGATATTGATG
* * * ** * * *
30556 CTTTGGTTTCGCAAGAAACG-TTTTCTTCCCCCCAACTTTTG-TAAAGT-ATCACTTCAT-TCCT
64 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCATC-A-TTTTGATAAA-TCA-AAGTT-GTCT-CT
* * * * * *
30617 CAAATTAAACAAACATGGATTCT-AGTAAC-GATCT
123 TAAATGAGACAAACAT-GATACTCA-T-ACTAATCC
* * * * * * * * *
30651 TCATTCATTTC-GTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGGT-TTGATGG
1 CCATTCTTTTCAG-GATTAGGCACCATAAACACAGTCTTCTCATAAGGATACATGATATTGATGC
** * * * * ** * * *
30714 TTTTCTTTTGCATCG-AAATCTTTTCTTTGCC-TTGTTCTCATTAAAATAAAAGTTTGTACT-TT
65 TTTGGTGTCGCA-AGAAAAGCTTTTCTTT-CCATCATTTTGA-T-AAATCAAAG-TTGT-CTCTT
** * * *
30776 AAATGAGACATTCATTGATTCTCATA-AAAGTCT
124 AAATGAGACAAACA-TGATACTCATACTAA-TCC
* * * * * ** * * * *
30809 CCACTCTTTCCAAGAATAGG-ATCCAAAAACACTTTC-CCTTCATTAGGATACATGACATTGGTG
1 CCATTCTTTTCAGGATTAGGCA-CCATAAACACAGTCTTC-TCATAAGGATACATGATATTGATG
* * * * * ** *
30872 CTTTGGTGTTGCGAGAGAAGCTTTTCTTTCCACCGTGAATGATGAAATCAAAGTTTATCTCTTAA
64 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCATCAT-TTTGAT-AAATCAAAG-TTGTCTCTTAA
* *
30937 ATAAGACAAACATGAATGCTCATACTAATCC
126 ATGAGACAAACATG-ATACTCATACTAATCC
* * * * *
30968 CCATTCTTTTCAGGATTAGGCACCATAAACATAATCTTATCATAAGGATACAAGATATTGATGAT
1 CCATTCTTTTCAGGATTAGGCACCATAAACACAGTCTTCTCATAAGGATACATGATATTGATGCT
* * * * *
31033 TTGGTTTCGCAAGAAATGCTTTT-TTCCCATCAATTTT-AGTAAATTCTAAGTTCGTGC-CTCAA
66 TTGGTGTCGCAAGAAAAGCTTTTCTTTCCATC-ATTTTGA-TAAA-TCAAAGTT-GT-CTCTTAA
* *** *
31095 ATGAGACAAACATTGATTCT-AGTAAGGATCT
126 ATGAGACAAACA-TGATACTCA-TACTAATCC
* * ** * * * * * * * *
31126 TCATTCATTTCTTGACTAGGCACTATAAACACATTCTCCTCGTCAGGATGCATGATATTGATGGT
1 CCATTCTTTTCAGGATTAGGCACCATAAACACAGTCTTCTCATAAGGATACATGATATTGATGCT
** * * * * * * *
31191 TTTCTTTTGCATGAAAATCTTTTCTTTGCC-TTATTTTCCATAAAATCAAAG-TGTGCACTTTAA
66 TTGGTGTCGCAAGAAAAGCTTTTCTTT-CCATCATTTT-GAT-AAATCAAAGTTGT-CTC-TTAA
** * * * *
31254 ATGAGACATGCATTGATTCTCGTGAC-AGTCT
126 ATGAGACAAACA-TGATACTCAT-ACTAATCC
* ** * * * * *
31285 CCATTCTTTTCAAGATTAGAAACCAAAAACACA-TCCCTT-TCATTAGGATACATGACATTAAAG
1 CCATTCTTTTCAGGATTAGGCACCATAAACACAGT--CTTCTCATAAGGATACATGATATTGATG
* * * * * ** * *
31348 CTTTGGTGTTGCAAGAGAAGCTTGTATTTTCGCCATTACTGATAGAATCAAAGTTTTCTCTTAAA
64 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCATCATT-TTGATA-AATCAAAGTTGTCTCTTAAA
* *
31413 TAAGACAAACATGAATACTCATACTAAACC
127 TGAGACAAACATG-ATACTCATACTAATCC
* * ** * * *
31443 CCATTCTTTTCTGGATTAGGCATCATAAACTTAGTCTTCTTACACGGATACATGATATTGATGCT
1 CCATTCTTTTCAGGATTAGGCACCATAAACACAGTCTTCTCATAAGGATACATGATATTGATGCT
* * * * * * *
31508 TTGGTGTCGCAAGATATGCTTTT-GTCCCACCAATTTGTG-TAAATTCTAAGTTCGT-TCCTCAA
66 TTGGTGTCGCAAGAAAAGCTTTTCTTTCCATC-ATTT-TGATAAA-TCAAAGTT-GTCT-CTTAA
* *** *
31570 ATGAGACAAACATGGATTCT-AGTAAGGATCT
126 ATGAGACAAACAT-GATACTCA-TACTAATCC
* * * * * * * * *
31601 TCATTCATTTCATGATTAGGCACTATAAACAC--TCTACTCATCAGGATGCATAATATTGATGGT
1 CCATTCTTTTCAGGATTAGGCACCATAAACACAGTCTTCTCATAAGGATACATGATATTGATGCT
** * * * * * * * * *
31664 TTTCTTTTGCATGGAAATCTTTTCTTTGCC-TTATTTTCCATAATATCAAAGTT-TCCACAGTAA
66 TTGGTGTCGCAAGAAAAGCTTTTCTTT-CCATCATTTT-GATAA-ATCAAAGTTGT-CTC-TTAA
** * * *
31727 ATGAGACATCCATTGATTCTCGTAAC-AGT-C
126 ATGAGACAAACA-TGATACTCAT-ACTAATCC
* * * * * * * * *
31757 CCATTCTTTTCAAGATTAGGAACGAAAAACACATTCCTT-TCATTAGTATACATGACATTGACGC
1 CCATTCTTTTCAGGATTAGGCACCATAAACACAGT-CTTCTCATAAGGATACATGATATTGATGC
* *
31821 TTTGGTGTCGCAAGAAAAGCTTGTCTTTCCATCGTTATTGATAGAATCAAAGTTGTCTCTTAAAT
65 TTTGGTGTCGCAAGAAAAGCTTTTCTTTCCATCATT-TTGATA-AATCAAAGTTGTCTCTTAAAT
*
31886 AAGACAAACATGAGTACTCATACTAATCC
128 GAGACAAACATGA-TACTCATACTAATCC
* * * *
31915 CCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATAATGATGCT
1 CCATTCTTTTCAGGATTAGGCACCATAAACACAGTCTTCTCATAAGGATACATGATATTGATGCT
* *
31980 TTGGTTTCACAAGA
66 TTGGTGTCGCAAGA
31994 TATGCTTTCT
Statistics
Matches: 1423, Mismatches: 429, Indels: 250
0.68 0.20 0.12
Matches are distributed among these distances:
155 2 0.00
156 80 0.06
157 143 0.10
158 694 0.49
159 463 0.33
160 40 0.03
161 1 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (155 bp):
CCATTCTTTTCAGGATTAGGCACCATAAACACAGTCTTCTCATAAGGATACATGATATTGATGCT
TTGGTGTCGCAAGAAAAGCTTTTCTTTCCATCATTTTGATAAATCAAAGTTGTCTCTTAAATGAG
ACAAACATGATACTCATACTAATCC
Found at i:33040 original size:722 final size:721
Alignment explanation
Indices: 31653--35042 Score: 2124
Period size: 722 Copynumber: 4.7 Consensus size: 721
31643 AGGATGCATA
* * **
31653 ATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAATATCAAAGTTT
1 ATATTGATGGTTTTCTTTTGCATGGAAATCTATTCTTTGCCTTATTTTCCATAAAATCAAAGACT
* * *
31718 CCACAGTAAATGAGACATCCATTGATTCTCGTAACAGTCCCATTCTTTTCAAGATTAGGAACGAA
66 CCACAGTAAATGACACATCCATTGATTCTCGTAAAAGTCCCATTCTTTTCAAGATTAGGAACCAA
* * * *
31783 AAACACATTCCTTTCATTAGTATACATGACATTGACGCTTTGGTGTCGCAAGAAAAGCTTGTCTT
131 AAACACATTCCATTCATCAGGATACATGACAATGACGCTTTGGTGTCGCAAGAAAAGCTTGTCTT
* * * *
31848 TCCATCGTTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAGTACTCATACTAAT
196 TCCACCGTTATTAATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACCCATACTAAT
* * * * *
31913 CCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATAATGATG
261 CCACATTCTTTTCAGGATTAGGCACCAAAAACATAGTCTTCTCATAAGGATACAAGATAATGATG
* * * * *
31978 CTTTGGTTTCACAAGATATGCTTTCTTCCCACCAATTTGTGTAAATTATGAGTTCATTGCTCAAA
326 CTTTGGTTTCACAAGAAATGCTTTCTTCCCACCAATTTGTGTAAAGTATCACTTCATTCCTCAAA
* ** * *
32043 TGAGACAAACATGGATTCCTGTAGGGATCTTTATTCGTTCCGTGATTAGGCACTATAAACACATT
391 TGAGACAAACATGGATTCCTGCAACGATCTTCATTCATTCCGTGATTAGGCACTATAAACACATT
* *
32108 CTCCGCTTTAGGATAAATGATGTTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATT
456 CTCCGCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATT
* * * * *
32173 TTCCTTAAAATCAACGTTTGTGCTTTAAATGAGACGTGCATTGATTCTCGTAAAGGTCTCCATTC
521 TTCCTTAAAATAAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC
* * *
32238 TTTTCAAGATTGTGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTAACGCTTTGGTG
586 TTTCCAAGATTGTGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTAACACTTTGGTG
*
32303 TCGCAAGAAAAGCTTTTCTTTCCAACGTTATTGATAAAATCAAAGTTT-GCGTCTTAAATAAGAC
651 TCGCAAGAAAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAAGTTTAGC-TCTTAAATAAGAC
32367 AAACATG
715 AAACATG
32374 ATATTGATGGTTTTCTTTTGCATGGAAATCTATTCTTTGCCTTATTTTCCATAAAATCAAAGACT
1 ATATTGATGGTTTTCTTTTGCATGGAAATCTATTCTTTGCCTTATTTTCCATAAAATCAAAGACT
* ** *
32439 GCACTTTAAATGACACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCA
66 CCACAGTAAATGACACATCCATTGATTCTCGTAAAAGTC-CCATTCTTTTCAAGATTAGGAACCA
* * * * *
32504 AAAACACATT-CATTCATCGGGATATATGACAAT-ATTGCTTTGGTGTCGCAGGAGAAGCTTGTC
130 AAAACACATTCCATTCATCAGGATACATGACAATGA-CGCTTTGGTGTCGCAAGAAAAGCTTGTC
* * *
32567 TTTCCACCTTTATTAATGGAATCAAAGTTTGTCTTTTAAATAAGACAAACATGAATACCCATACT
194 TTTCCACCGTTATTAATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACCCATACT
* *
32632 AATCCACATTCTTTTCCA-GATTAGGCCCCAAAAACATAGTCTTCTCATAAGGATACAAGATATT
258 AATCCACATTCTTTT-CAGGATTAGGCACCAAAAACATAGTCTTCTCATAAGGATACAAGATAAT
* * * * *
32696 TATGCTTTGGTTTCGCAATAAATGCTTTCTTCCCTCTAACTTT-TGTAAAGTATCACTTCATTCC
322 GATGCTTTGGTTTCACAAGAAATGCTTTCTTCCCACCAA-TTTGTGTAAAGTATCACTTCATTCC
* *
32760 TCAAATTAGACAAACATGGATT-CTGGCAACGATCTTCATTCATTTCGTGATTAAGG-ACTATAA
386 TCAAATGAGACAAACATGGATTCCT-GCAACGATCTTCATTCATTCCGTGATT-AGGCACTATAA
* *
32823 ACACATTCTCCTCATTAGGATAAATGGTATTGATGGTTTTCTTTTGCATCG-AAATCTTTTCTTT
449 ACACATTCTCCGCATTAGGATAAATGATATTGATGGTTTTCTTTTGCAT-GAAAATCTTTTCTTT
*
32887 GCCTTATTTTTCTTAAAATAAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGT
513 GCCTTATTTTCCTTAAAATAAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGT
* * ***
32952 CTCCATTCTTTCCAAGATTAG-GATCCAAAAACACTTTCCCTTCATTAGGATACATGACATTGGT
578 CTCCATTCTTTCCAAGATT-GTGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTAAC
* * * * *
33016 ACTTTGGTGTTGCGAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTCTTA
642 ACTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAAGTTTAGCTCTTA
*
33081 AATAAGATAAACATG
707 AATAAGACAAACATG
* ** ** ** * ** * **** * *
33096 A-ATCTCATACTAATC---CCCAT-----TCTTTTC-AAG-ATTAGGCACCAT-AAA-CATAGTC
1 ATAT-TGATGGTTTTCTTTTGCATGGAAATCTATTCTTTGCCTTATTTTCCATAAAATCAAAGAC
* * * * * * * * * * * * *
33148 TTATCATAAAGATATAGGATATTGAT-GATTTGGTT-TCGCAAGAA-ACGCTTTTTTCCTATCAA
65 ---TC-CACAG-TAAATGACA--CATCCA-TTGATTCTCGTAA-AAGTCCCATTCTT--T-TCAA
** * ** * * * * **
33210 TTTTA-G---TAAATTCTA-AGTT-CGTACCTC---A-A-GTGA-AAT-A-AATTTGGAT-T--C
118 GATTAGGAACCAAAAAC-ACA-TTCCATTCATCAGGATACATGACAATGACGCTTTGG-TGTCGC
* * * * ** * * * * * *
33258 TAGTAAAGATCTTCATTCATTT-CA-TGATTAGGCACTATAAACACA-TTCTCCTCGTTAGGAT-
180 AAG-AAA-AGCTT--GTC-TTTCCACCG-TTA-TTAATAGAATCAAAGTTGT-CTC-TTA-AATA
** * *** * ** * * * * ** *****
33319 -G-C-ATGAT-ATTGACGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTTTTTTCCATAAAA
235 AGACAAACATGAAT-AC-CCATACTAAT-C--CACATTCTTTTC--AGGATTAGGCACCA-AAAA
* * * * * * * ** * ** * *
33380 TCAAAGT-TT-GCACT----TTA-AATGA-GACG-TGCATTGATTCTCGTAACAGTCTCCATTCT
292 -CATAGTCTTCTCA-TAAGGATACAA-GATAATGATGCTTTGGTT-TCACAAGA-AATGCTTTCT
* * * ** * * * * * * ** *
33436 T--TACAAGATTAG-G-AACCAAAAACACACTC-TT-TTCATTAGGATACATGGCATTGATGCTT
352 TCCCACCA-ATTTGTGTAA--AGTATCAC-TTCATTCCTCA-AATGAGACA-AACA-TG--G--A
** * * * * * * * * * * *
33495 TGGTGTTGTAAGAGAAGCTT--GTCTTTCCGCCG-TTATTG-A-TAGAATCAAAGTTGT--GTC-
406 T--TCCTGCAA-CG-ATCTTCATTCATTCCG-TGATTA-GGCACTATAAACACA-TTCTCCG-CA
* * *** * ** ** * *** * * * * ****
33552 TTA-AAT-AA-GACAAACATGAATACTCATACT-AATCCCCATTGTTTTC-TAG-GTTAGGCACC
463 TTAGGATAAATGATATTGATG-GTTTTC-TTTTGCAT-GAAAATCTTTTCTTTGCCTTATTTTCC
* * **** * * * * * * * * * *
33611 ATAAACTTAGTCTTCTTATACGTATACATGATATTGATGCTTTGGTT-TCGCAAGA-TAC-GC-T
525 TTAAA-ATAAAAGT-TTGTAC-TTTAAATGAGA--CATGCATTGATTCTCGTAAAAGT-CTCCAT
* ** * * * * * *
33672 T-TTGTCCCACCA-ATTTGTG---TAAATTCTA-AGTT-CGTGCCTCA-AAT-GA-GACA--AAC
584 TCTT-T-CCA--AGA-TTGTGAACCAAAAAC-ACA-TTCCCTTCATTAGGATACATGACATTAAC
* * * * * * * * * * * *
33725 A---TGGAT-T--CTAGTAAGGATCTTCATT-C-A-TTTCATGATTAGGCACTATAAACACTCTA
642 ACTTTGG-TGTCGCAAGAAAAGCTTTTCTTTCCAACGTTAATGA-TA---A-AATCAA-AGTTTA
* * ** *
33781 -CTC----ATCAG-GATGCATA
700 GCTCTTAAATAAGACAAACATG
* * **
33797 ATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAATATCAAAGTTT
1 ATATTGATGGTTTTCTTTTGCATGGAAATCTATTCTTTGCCTTATTTTCCATAAAATCAAAGACT
* * * *
33862 CCACAGTAAATGAGACATCCATTGATTCTTGTAACAGTCCCCATTCTTTTCAAGATTAGGAACGA
66 CCACAGTAAATGACACATCCATTGATTCTCGTAAAAGT-CCCATTCTTTTCAAGATTAGGAACCA
* * * *
33927 AAAACACATTCCTTTCATTAGTATACATGACATTGACGCTTTGGTGTCGCAAGAAAAGCTTGTCT
130 AAAACACATTCCATTCATCAGGATACATGACAATGACGCTTTGGTGTCGCAAGAAAAGCTTGTCT
* * * *
33992 TTCCATCGTTATTGATAGAATCAAAGTTGTCTTTTAAATAAGACAAACATGAATACTCATACTAA
195 TTCCACCGTTATTAATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACCCATACTAA
* * * * * *
34057 TCCCCATTCTTTTTAGGATTTGGCACCATAAACATAGTCTTCTTATAAGGATACACGATAATGAT
260 TCCACATTCTTTTCAGGATTAGGCACCAAAAACATAGTCTTCTCATAAGGATACAAGATAATGAT
* * * *
34122 GCTTTGGTTTCGCAATAAATGCTTTCTTCCCTCTAACTTT-TGTAAAGTATCACTTCATTCCTCA
325 GCTTTGGTTTCACAAGAAATGCTTTCTTCCCACCAA-TTTGTGTAAAGTATCACTTCATTCCTCA
* * *
34186 AATTAGAAAAACATGGATT-CTGGCAACGATCTTCATTCATTTCGTGATTAAGG-ACTATAAACA
389 AATGAGACAAACATGGATTCCT-GCAACGATCTTCATTCATTCCGTGATT-AGGCACTATAAACA
* *
34249 CATTCTCCTCATTAGGATAAATGGTATTGATGGTTTTCTTTTGCATCG-AAATCTTTTCTTTGCC
452 CATTCTCCGCATTAGGATAAATGATATTGATGGTTTTCTTTTGCAT-GAAAATCTTTTCTTTGCC
* * * * *
34313 TTATTTTCCTTAAAATCAACGTTTGTGCTTTAAATGAGACGTGCATTGATTCTCGTAAAGGTCTC
516 TTATTTTCCTTAAAATAAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTC
* * *
34378 CATTCTTTTCAAGATTGTGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTAACGCTT
581 CATTCTTTCCAAGATTGTGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTAACACTT
* *
34443 TGGTGTCGAAAGAAAAGCTTTTCTTTCCAACGTTATTGATAAAATCAAAGTTT-GCGTCTTAAAT
646 TGGTGTCGCAAGAAAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAAGTTTAGC-TCTTAAAT
34507 AAGACAAACATG
710 AAGACAAACATG
* * **
34519 ATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAATATCAAAGTTT
1 ATATTGATGGTTTTCTTTTGCATGGAAATCTATTCTTTGCCTTATTTTCCATAAAATCAAAGACT
* * *
34584 CCACAGTAAATGAGACATCCATTGATTCTCGTAACAGTCCCCATTCTTTTCAAGATTAGGAACGA
66 CCACAGTAAATGACACATCCATTGATTCTCGTAAAAGT-CCCATTCTTTTCAAGATTAGGAACCA
* * * *
34649 AAAACACATTCCTTTCATTAGTATACATGACATTGACGCTTTGGTGTCGCAAGAAAAGCTTGTCT
130 AAAACACATTCCATTCATCAGGATACATGACAATGACGCTTTGGTGTCGCAAGAAAAGCTTGTCT
* * *
34714 TTCCACCTTTATTAATGGAATCAAAGTTTGTCTTTTAAATAAGACAAACATGAATACCCATACTA
195 TTCCACCGTTATTAATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACCCATACTA
* * *
34779 ATCCACATTCTTTTCCA-GATTAGGCCCCAAAAACATAGTCTTCTCATAAGGATACAAGATATTT
259 ATCCACATTCTTTT-CAGGATTAGGCACCAAAAACATAGTCTTCTCATAAGGATACAAGATAATG
* * * *
34843 ATGCTTTGGTTTCGCAATAAATGCTTTCTTCCCTCTAACTTT-TGTAAAGTATCACTTCATTCCT
323 ATGCTTTGGTTTCACAAGAAATGCTTTCTTCCCACCAA-TTTGTGTAAAGTATCACTTCATTCCT
* *
34907 CAAATTAGACAAACATGGATT-CTGGCAACGATCTTCATTCATTTCGTGATTAAGG-ACTATAAA
387 CAAATGAGACAAACATGGATTCCT-GCAACGATCTTCATTCATTCCGTGATT-AGGCACTATAAA
* *
34970 CACATTCTCCTCATTAGGATAAATGGTATTGATGGTTTTCTTTTGCATCG-AAATCTTTTCTTTG
450 CACATTCTCCGCATTAGGATAAATGATATTGATGGTTTTCTTTTGCAT-GAAAATCTTTTCTTTG
35034 CCTTATTTT
514 CCTTATTTT
35043 AGTAAATTCT
Statistics
Matches: 1979, Mismatches: 488, Indels: 402
0.69 0.17 0.14
Matches are distributed among these distances:
701 17 0.01
702 8 0.00
703 1 0.00
704 18 0.01
705 13 0.01
706 56 0.03
707 43 0.02
708 64 0.03
709 89 0.04
710 66 0.03
711 42 0.02
712 40 0.02
713 51 0.03
714 88 0.04
715 77 0.04
716 40 0.02
717 63 0.03
718 14 0.01
719 21 0.01
720 2 0.00
721 170 0.09
722 696 0.35
723 299 0.15
724 1 0.00
ACGTcount: A:0.30, C:0.19, G:0.14, T:0.37
Consensus pattern (721 bp):
ATATTGATGGTTTTCTTTTGCATGGAAATCTATTCTTTGCCTTATTTTCCATAAAATCAAAGACT
CCACAGTAAATGACACATCCATTGATTCTCGTAAAAGTCCCATTCTTTTCAAGATTAGGAACCAA
AAACACATTCCATTCATCAGGATACATGACAATGACGCTTTGGTGTCGCAAGAAAAGCTTGTCTT
TCCACCGTTATTAATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACCCATACTAAT
CCACATTCTTTTCAGGATTAGGCACCAAAAACATAGTCTTCTCATAAGGATACAAGATAATGATG
CTTTGGTTTCACAAGAAATGCTTTCTTCCCACCAATTTGTGTAAAGTATCACTTCATTCCTCAAA
TGAGACAAACATGGATTCCTGCAACGATCTTCATTCATTCCGTGATTAGGCACTATAAACACATT
CTCCGCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATT
TTCCTTAAAATAAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC
TTTCCAAGATTGTGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTAACACTTTGGTG
TCGCAAGAAAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAAGTTTAGCTCTTAAATAAGACA
AACATG
Found at i:33271 original size:475 final size:476
Alignment explanation
Indices: 32371--34519 Score: 2750
Period size: 475 Copynumber: 4.5 Consensus size: 476
32361 TAAGACAAAC
* *
32371 ATGATATTGATGGTTTTCTTTTGCATGGAAATCTATTCTTTGCCTTATTTTCCATAAAATCAAAG
1 ATGATATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAG
** *
32436 ACTGCACTTTAAATGACACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAA
66 TTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAA
* ** * * *
32501 CCAAAAACACATT-CATTCATCGGGATATATGACAAT-ATTGCTTTGGTGTCGCAGGAGAAGCTT
131 CCAAAAACACATTCCCTTCATTAGGATACATGACATTGA-TGCTTTGGTGTCGCAAGAGAAGCTT
* * * * *
32564 GTCTTTCCACCTTTATTAATGGAATCAAAGTTTGTCTTTTAAATAAGACAAACATGAATACCCAT
195 GTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAT
* * * *
32629 ACTAATCCACATTCTTTTCCAGATTAGGCCCCAAAAACATAGTCTTCTCATAAGGATACAAGATA
260 ACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAAGATA
* * * * *
32694 TTTATGCTTTGGTTTCGCAATAAATGCTTTCTTCCCTCTAACTTTTGTAAAGTATCACTTCATTC
325 TTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCATCTAACTTTTGTAAAGTATAACTTCATTC
* * * *
32759 CTCAAATTAGACAAACATGGATTCTGGCAACGATCTTCATTCATTTCGTGATTAAGG-ACTATAA
390 CTCAAATGAAACAAACATGGATTCTAGCAACGATCTTCATTCATTTCATGATT-AGGCACTATAA
32823 ACACATTCTCCTCATTAGGATAA
454 ACACATTCTCCTCATTAGGATAA
* * * *
32846 ATGGTATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTTCTTAAAATAAAAG
1 ATGATATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAG
* * *
32911 TTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTAGGAT
66 TTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAA
* * * * * *
32976 CCAAAAACACTTTCCCTTCATTAGGATACATGACATTGGTACTTTGGTGTTGCGAGAGAAGCTTT
131 CCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTG
* * * *
33041 TCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTCTTAAATAAGATAAACATGAAT-CTCATA
196 TCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATA
* * * *
33105 CTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTATCATAAAGATATAGGATAT
261 CTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAAGATAT
* * * * * * *
33170 TGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCTATC-AA-TTTTAGTAAATTCTAAGTTCGTA
326 TGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCC-ATCTAACTTTT-GTAAAGTATAACTTCATT
* * ** * *
33233 CCTCAAGTGAAATAAATTTGGATTCTAGTAAAGATCTTCATTCATTTCATGATTAGGCACTATAA
389 CCTCAAATGAAACAAACATGGATTCTAGCAACGATCTTCATTCATTTCATGATTAGGCACTATAA
* **
33298 ACACATTCTCCTCGTTAGGATGC
454 ACACATTCTCCTCATTAGGATAA
* *
33321 ATGATATTGACGGTTTTCTTTTGCAT-GAAAATCTTTTCTTTGCCTTTTTTTCCATAAAATCAAA
1 ATGATATTGATGGTTTTCTTTTGCATCG-AAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAA
* * *
33385 GTTTGCACTTTAAATGAGACGTGCATTGATTCTCGTAACAGTCTCCATTCTTTACAAGATTAGGA
65 GTTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGA
* ** * * *
33450 ACCAAAAACACACTCTTTTCATTAGGATACATGGCATTGATGCTTTGGTGTTGTAAGAGAAGCTT
130 ACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTT
* *
33515 GTCTTTCCGCCGTTATTGATAGAATCAAAG-TTGTGTCTTAAATAAGACAAACATGAATACTCAT
195 GTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAT
* * * * * * * *
33579 ACTAATCCCCATTGTTTTCTAGGTTAGGCACCATAAACTTAGTCTTCTTATACGTATACATGATA
260 ACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAAGATA
* * * * * *
33644 TTGATGCTTTGGTTTCGCAAGATACGCTTT-TGTCCCA-CCAA-TTTGTGTAAATTCTAAGTTCG
325 TTGATGCTTTGGTTTCGCAAGAAACGCTTTCT-T-CCATCTAACTTT-TGTAAAGTATAACTTCA
* * * *
33706 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTAT
387 TTCCTCAAATGAAACAAACATGGATTCTAGCAACGATCTTCATTCATTTCATGATTAGGCACTAT
* * **
33771 AAACAC--TCTACTCATCAGGATGC
452 AAACACATTCTCCTCATTAGGATAA
* * *
33794 ATAATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAATATCAAAG
1 ATGATATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAG
* ** * * * *
33859 TTTCCACAGTAAATGAGACATCCATTGATTCTTGTAACAGTCCCCATTCTTTTCAAGATTAGGAA
66 TTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAA
* * * * *
33924 CGAAAAACACATTCCTTTCATTAGTATACATGACATTGACGCTTTGGTGTCGCAAGAAAAGCTTG
131 CCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTG
* *
33989 TCTTTCCATCGTTATTGATAGAATCAAAG-TTGTCTTTTAAATAAGACAAACATGAATACTCATA
196 TCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATA
* * * * * *
34053 CTAATCCCCATTCTTTTTAGGATTTGGCACCATAAACATAGTCTTCTTATAAGGATACACGATAA
261 CTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAAGATAT
* * * *
34118 TGATGCTTTGGTTTCGCAATAAATGCTTTCTTCCCTCTAACTTTTGTAAAGTATCACTTCATTCC
326 TGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCATCTAACTTTTGTAAAGTATAACTTCATTCC
* * *
34183 TCAAATTAGAA-AAACATGGATTCTGGCAACGATCTTCATTCATTTCGTGATTAAGG-ACTATAA
391 TCAAATGA-AACAAACATGGATTCTAGCAACGATCTTCATTCATTTCATGATT-AGGCACTATAA
34246 ACACATTCTCCTCATTAGGATAA
454 ACACATTCTCCTCATTAGGATAA
* * *
34269 ATGGTATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAACG
1 ATGATATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAG
** * *
34334 TTTGTGCTTTAAATGAGACGTGCATTGATTCTCGTAAAGGTCTCCATTCTTTTCAAGATT-GTGA
66 TTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GA
* * * * *
34398 ACCAAAAATACATTCCCTTCATTAGGATACATGACATTAACGCTTTGGTGTCGAAAGAAAAGCTT
130 ACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTT
* * *
34463 TTCTTTCCAACGTTATTGATAAAATCAAAGTTTG-CGTCTTAAATAAGACAAACATGA
195 GTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTC-TCTTAAATAAGACAAACATGA
34520 TATTGATGGT
Statistics
Matches: 1452, Mismatches: 200, Indels: 43
0.86 0.12 0.03
Matches are distributed among these distances:
472 2 0.00
473 400 0.28
474 45 0.03
475 888 0.61
476 117 0.08
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (476 bp):
ATGATATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAG
TTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAA
CCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTG
TCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATA
CTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAAGATAT
TGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCATCTAACTTTTGTAAAGTATAACTTCATTCC
TCAAATGAAACAAACATGGATTCTAGCAACGATCTTCATTCATTTCATGATTAGGCACTATAAAC
ACATTCTCCTCATTAGGATAA
Found at i:34245 original size:948 final size:945
Alignment explanation
Indices: 32369--34519 Score: 2803
Period size: 948 Copynumber: 2.3 Consensus size: 945
32359 AATAAGACAA
*
32369 ACATGATATTGATGGTTTTCTTTTGCATGGAAATCTATTCTTTGCCTTATTTTCCATAAAATCAA
1 ACATGATATTGATGGTTTTCTTTTGCAT-GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAA
** * *
32434 AGACTGCACTTTAAATGACACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGG
65 AGTTTGCACTTTAAATGAGACGTGCATTGATTCTCGT-AAAGTCTCCATTCTTTTCAAGATTAGG
** * * * *
32499 AACCAAAAACACATTCATTCATCGGGATATATGACAATATTGCTTTGGTGTCGCAGGAGAAGCTT
129 AACCAAAAACACATTCATTCATTAGGATACATGACATTA-TGCTTTGGTGTCGAAAGAGAAGCTT
* * *
32564 GTCTTTCCACCTTTATTAATGGAATCAAAGTT-TGTCTTTTAAATAAGACAAACATGAATACCCA
193 GTCTTTCCACCGTTATTGATAGAATCAAAGTTGTGTC--TTAAATAAGACAAACATGAATACCCA
*
32628 TACTAATCCACATTCTTTTCCAGATTAGGCCCCAAAAACATAGTCTTCTCATAAGGATACAAGAT
256 TACTAATCCACATTCTTTTCCAGATTAGGCACCAAAAACATAGTCTTCTCATAAGGATACAAGAT
* * * * * * *
32693 ATTTATGCTTTGGTTTCGCAATAAATGCTTTCTTCCCTCTAACTTTTGTAAAGTATCACTTCATT
321 ATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAACTTTTGTAAAGTATAACTTCATG
* * *
32758 CCTCAAATTAGACAAACATGGATTCTGGCAACGATCTTCATTCATTTCGTGATTAAGGACTATAA
386 CCTCAAATGAGACAAACATGGATTCTAGCAACGATCTTCATTCATTTCATGATTAAGGACTATAA
* * **
32823 ACACATTCTCCTCATTAGGATAAATGGTATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTG
451 ACACA-TCTACTCATCAGGATAAATAATATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTG
* * ** ** *
32888 CCTTATTTTTCTTAAAATAAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
515 CCTTATTTTCCATAAAATAAAAGTTTCCACAGTAAATGAGACATCCATTGATTCTCGTAAAAGTC
* * * **
32953 TCCATTCTTTCCAAGATTAGGATCCAAAAACACTTTCCCTTCATTAGGATACATGACATTGGTAC
580 CCCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGACAC
* * * *
33018 TTTGGTGTTGCGAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTCTTAAA
645 TTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTCTTAAA
*
33083 TAAGATAAACATGAATCTCATACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTC
710 TAAGACAAACATGAATCTCATACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTC
* * * *
33148 TTATCATAAAGATATAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCTATCAATTT
775 TTATCATAAAGATACACGATAATGATGATTTGGTTTCGCAAGAAACGCTTTTTCCCTATCAATTT
* * * * * ** *
33213 TAGTAAATTCTAAGTTCGTACCTCAAGTGAAATAAATTTGGATTCTAGTAAAGATCTTCATTCAT
840 TAGTAAAGTATAACTTCATACCTCAAATGAAATAAACATGGATTCTAGCAAAGATCTTCATTCAT
*
33278 TTCATGATTAGGCACTATAAACACATTCTCCTCGTTAGGAT
905 TTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
33319 GCATGATATTGACGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTTTTTTCCATAAAATCAA
1 ACATGATATTGATGGTTTTCTTTTGCATG-AAATCTTTTCTTTGCCTTATTTTCCATAAAATCAA
*
33384 AGTTTGCACTTTAAATGAGACGTGCATTGATTCTCGTAACAGTCTCCATTCTTTACAAGATTAGG
65 AGTTTGCACTTTAAATGAGACGTGCATTGATTCTCGTAA-AGTCTCCATTCTTTTCAAGATTAGG
* * * * *
33449 AACCAAAAACACACTCTTTTCATTAGGATACATGGCATTGATGCTTTGGTGTTGTAAGAGAAGCT
129 AACCAAAAACACATTC-ATTCATTAGGATACATGACATT-ATGCTTTGGTGTCGAAAGAGAAGCT
* *
33514 TGTCTTTCCGCCGTTATTGATAGAATCAAAGTTGTGTCTTAAATAAGACAAACATGAATACTCAT
192 TGTCTTTCCACCGTTATTGATAGAATCAAAGTTGTGTCTTAAATAAGACAAACATGAATACCCAT
* * * * * * * * * *
33579 ACTAATCCCCATTGTTTTCTAGGTTAGGCACCATAAACTTAGTCTTCTTATACGTATACATGATA
257 ACTAATCCACATTCTTTTCCAGATTAGGCACCAAAAACATAGTCTTCTCATAAGGATACAAGATA
* * * * *
33644 TTGATGCTTTGGTTTCGCAAGATACGCTTT-TGTCCCACCAA-TTTGTGTAAATTCTAAGTTCGT
322 TTGATGCTTTGGTTTCGCAAGAAACGCTTTCT-TCCCACCAACTTT-TGTAAAGTATAACTTCAT
* *
33707 GCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATT-AGGCACTAT
385 GCCTCAAATGAGACAAACATGGATTCTAGCAACGATCTTCATTCATTTCATGATTAAGG-ACTAT
** *
33771 AAACAC-TCTACTCATCAGGATGCATAATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
449 AAACACATCTACTCATCAGGATAAATAATATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTT
* * * *
33835 GCCTTATTTTCCATAATATCAAAGTTTCCACAGTAAATGAGACATCCATTGATTCTTGTAACAGT
514 GCCTTATTTTCCATAAAATAAAAGTTTCCACAGTAAATGAGACATCCATTGATTCTCGTAAAAGT
* * * * *
33900 CCCCATTCTTTTCAAGATTAGGAACGAAAAACACATTCCTTTCATTAGTATACATGACATTGACG
579 CCCCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGACA
* * * * *
33965 CTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCATCGTTATTGATAGAATCAAAG-TTGTCTTTTAA
644 CTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTCTTAA
* * *
34029 ATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTTGGCACCATAAACATAG
709 ATAAGACAAACATGAAT-CTCATACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAG
* * * * * * *
34094 TCTTCTTATAAGGATACACGATAATGATGCTTTGGTTTCGCAATAAATGCTTTCTTCCCTCT-AA
773 TCTTATCATAAAGATACACGATAATGATGATTTGGTTTCGCAAGAAACGCTTT-TTCCCTATCAA
* * * * *
34158 CTTTT-GTAAAGTATCACTTCATTCCTCAAATTAGAA-AAACATGGATTCTGGCAACGATCTTCA
837 -TTTTAGTAAAGTATAACTTCATACCTCAAATGA-AATAAACATGGATTCTAGCAAAGATCTTCA
*
34221 TTCATTTCGTGATTAAGG-ACTATAAACACATTCTCCTCATTAGGAT
900 TTCATTTCATGATT-AGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
34267 AAATGGTATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAA
1 ACATGATATTGATGGTTTTCTTTTGCAT-GAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAA
* **
34332 CGTTTGTGCTTTAAATGAGACGTGCATTGATTCTCGTAAAGGTCTCCATTCTTTTCAAGATT-GT
65 AGTTTGCACTTTAAATGAGACGTGCATTGATTCTCGTAAA-GTCTCCATTCTTTTCAAGATTAG-
* * * *
34396 GAACCAAAAATACATTCCCTTCATTAGGATACATGACATTAACGCTTTGGTGTCGAAAGAAAAGC
128 GAACCAAAAACACATT-CATTCATTAGGATACATGACATT-ATGCTTTGGTGTCGAAAGAGAAGC
* * * *
34461 TTTTCTTTCCAACGTTATTGATAAAATCAAAGTTTGCGTCTTAAATAAGACAAACATGA
191 TTGTCTTTCCACCGTTATTGATAGAATCAAAG-TTGTGTCTTAAATAAGACAAACATGA
34520 TATTGATGGT
Statistics
Matches: 1040, Mismatches: 143, Indels: 37
0.85 0.12 0.03
Matches are distributed among these distances:
947 27 0.03
948 573 0.55
949 52 0.05
950 317 0.30
951 66 0.06
952 5 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (945 bp):
ACATGATATTGATGGTTTTCTTTTGCATGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAA
GTTTGCACTTTAAATGAGACGTGCATTGATTCTCGTAAAGTCTCCATTCTTTTCAAGATTAGGAA
CCAAAAACACATTCATTCATTAGGATACATGACATTATGCTTTGGTGTCGAAAGAGAAGCTTGTC
TTTCCACCGTTATTGATAGAATCAAAGTTGTGTCTTAAATAAGACAAACATGAATACCCATACTA
ATCCACATTCTTTTCCAGATTAGGCACCAAAAACATAGTCTTCTCATAAGGATACAAGATATTGA
TGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAACTTTTGTAAAGTATAACTTCATGCCTCA
AATGAGACAAACATGGATTCTAGCAACGATCTTCATTCATTTCATGATTAAGGACTATAAACACA
TCTACTCATCAGGATAAATAATATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTAT
TTTCCATAAAATAAAAGTTTCCACAGTAAATGAGACATCCATTGATTCTCGTAAAAGTCCCCATT
CTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGACACTTTGGT
GTCGCAAGAAAAGCTTGTCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTCTTAAATAAGAC
AAACATGAATCTCATACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTATCA
TAAAGATACACGATAATGATGATTTGGTTTCGCAAGAAACGCTTTTTCCCTATCAATTTTAGTAA
AGTATAACTTCATACCTCAAATGAAATAAACATGGATTCTAGCAAAGATCTTCATTCATTTCATG
ATTAGGCACTATAAACACATTCTCCTCATTAGGAT
Found at i:34709 original size:247 final size:247
Alignment explanation
Indices: 34273--34766 Score: 715
Period size: 247 Copynumber: 2.0 Consensus size: 247
34263 GGATAAATGG
* * *
34273 TATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAACGTTTG
1 TATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTC
** ** * * *
34338 TGCTTTAAATGAGACGTGCATTGATTCTCGTAAAGGTCTCCATTCTTTTCAAGATTGTGAACCAA
66 CACAGTAAATGAGACATCCATTGATTCTCGTAAAGGTCCCCATTCTTTTCAAGATTGTGAACCAA
* *
34403 AAATACATTCCCTTCATTAGGATACATGACATTAACGCTTTGGTGTCGAAAGAAAAGCTTTTCTT
131 AAACACATTCCCTTCATTAGGATACATGACATTAACGCTTTGGTGTCGAAAGAAAAGCTTGTCTT
*
34468 TCCAACGTTATTGATAAAATCAAAGTTTG-CGTCTTAAATAAGACAAACATGA
196 TCCAACGTTATTAATAAAATCAAAGTTTGTC-TCTTAAATAAGACAAACATGA
* *
34520 TATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAATATCAAAGTTTC
1 TATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTC
*
34585 CACAGTAAATGAGACATCCATTGATTCTCGTAACA-GTCCCCATTCTTTTCAAGATTAG-GAACG
66 CACAGTAAATGAGACATCCATTGATTCTCGTAA-AGGTCCCCATTCTTTTCAAGATT-GTGAACC
* * * *
34648 AAAAACACATTCCTTTCATTAGTATACATGACATTGACGCTTTGGTGTCGCAAGAAAAGCTTGTC
129 AAAAACACATTCCCTTCATTAGGATACATGACATTAACGCTTTGGTGTCGAAAGAAAAGCTTGTC
* * ** *
34713 TTTCCACCTTTATTAATGGAATCAAAGTTTGTCTTTTAAATAAGACAAACATGA
194 TTTCCAACGTTATTAATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGA
34767 ATACCCATAC
Statistics
Matches: 219, Mismatches: 25, Indels: 6
0.88 0.10 0.02
Matches are distributed among these distances:
247 216 0.99
248 3 0.01
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (247 bp):
TATTGATGGTTTTCTTTTGCATCGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTC
CACAGTAAATGAGACATCCATTGATTCTCGTAAAGGTCCCCATTCTTTTCAAGATTGTGAACCAA
AAACACATTCCCTTCATTAGGATACATGACATTAACGCTTTGGTGTCGAAAGAAAAGCTTGTCTT
TCCAACGTTATTAATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGA
Found at i:36333 original size:159 final size:159
Alignment explanation
Indices: 35203--43960 Score: 1648
Period size: 159 Copynumber: 55.2 Consensus size: 159
35193 CTTTTTTTCC
** * * *
35203 ATAAAATCAAAGTTTGCACT-TTAAATGAGACATGCATTGATTCTCGTAACAGTCTCCATTCTTT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
* * ** *
35267 ACAAGATTAGGAACCAAAAACACACTCTTTTCATTAGGATACATGGCATTGATGCTTTGGTGTTG
65 TCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * **
35332 CAAGAGAAGCTTGTCTTTCCGCCGTTATTG
130 CAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * * * * *
35362 ATAGAATCAAAGTTGTG--TCTTAAATAAGACAAACA-TGAATACTCATACTAA-TCCCCATTGT
1 ATAAAATCAAAGTT-TGCCTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTCCACTCT
* * * * ** * * * * *
35423 TTTCTAGGTTAGGCACCATAAACTTAGT--CTTCTTATACGTATACATGATATTGATGCTTTAGT
63 TTTCAAGATTAGGAACCAAAAACACATTCCCTTCAT-TA-GGATACATGACATTGATGCTTTGGT
* * * * * *
35486 -TTCGCAAGATACGCTTTT-GTCCCACCAATT-TGTG
126 GTT-GCAAGAAAAGCTTTTCTTTCCAAC-GTTAT-TG
* * * * * *
35520 -TAAATTCTAAGTTCGTGCCTC--AAATGAGACAAACATGGATTCT-AGT-AAGGATCTTCATTC
1 ATAAAATCAAAGTT--TGCCTCTTAAATGAGACAAACATTGATTCTCA-TAAAAG-TCTCCACTC
* * * * * * * * * ** *
35580 ATTTCATGATTAGGCACTATAAACAC--TCCC-TCATCAGGATGCATGATATTGATGGTTTTCTT
62 TTTTCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * *
35642 TTGCATGGAAATCTTTTCTTTGC--C-TTATTTTCC
127 TTGCAAGAAAAGCTTTTCTTTCCAACGTTA--TT-G
* * * ** * * * * * *
35675 ATAAAATCAAACTTTTCAC-ATTAAATGAGACATGCGTTAATTCTCGTAATAGTCCCCATTCTTT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
** * * * * *
35739 TCAAGATTAGGAATGAAAAACACATTTCTTTCATTAGGATAAATGACATTGATGCTATGGTGTCG
65 TCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * * * *
35804 TAAGAGAAGCTTGTCTTTCCACCGCTATTG
130 CAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * * * * * *
35834 ATAGAATCAAAG-TTGTCTTTTAAATAAGACAAACA-TGAATACTCATACTAA-TCCCCATTCTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTCCACTCTT
* * * * * * * * * * * *
35896 TTTAGGATTTGGCACCATAAACATAGTCTTCTT-ATAAGGATACACGATAATGATGCTTTGGT-T
64 TTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGT
* * * *
35959 TCGCAAGATACA-C-TTTCTTCCCACCAATT-TGTG
128 T-GCAAGA-AAAGCTTTTCTTTCCAAC-GTTAT-TG
* * * ** ** * *
35992 -T-AAAGCATGAGTTCATTG-CTC--AAATGAGACAAACATGGATTCTTGT-AGGGATCTTCATT
1 ATAAAATCA-AAG-T--TTGCCTCTTAAATGAGACAAACATTGATTCTCATAAAAG-TCTCCACT
* ** * * * * * * * * **
36051 CATTTCGTGATTAGGCACTATAAACACATTCTCC-GCTTTAGGATAAATGATATTGATGGTTTTC
61 CTTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGG
* * * * *
36115 TTTTGCATGAAAATCTTTTCTTTGC--C-TTATTTTCC
125 TGTTGCAAGAAAAGCTTTTCTTTCCAACGTTA--TT-G
* * * ** ** *
36150 ATGAAATCAAACTTTGTACT-TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTT
1 ATAAAATCAAAGTTTG-CCTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
* * *
36214 TCAAGATT-GTGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGACGCTTTGGTGTG
65 TCAAGATTAG-GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTT
36278 GCAAGAAAAGCTTTTCTTTCCAACGTTATTG
129 GCAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * * *
36309 ATAAAATCAAAGTTTGCCTCTTAAATAAGACAAACA-TGAATACTCATACTAA-TCCCCATTCTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTCCACTCTT
* * * * * * * * * * *
36372 TTCAAGATTAGGCACCATAAACATAGT-CTTCTCATAAGGATATAGGATATTGATGATTTGGTTT
64 TTCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGT
* * * *
36436 TGCAAGAAACA-CTTTT-TTCCCATCAATTTTTG
128 TGCAAGAAA-AGCTTTTCTTTCCAAC-GTTATTG
* * * * ** * * * *
36468 -TAAATTCTAAGTTCATACCTC--AAATGAGACAAACATGGATTCTGGT-AAAGATCTTCGCCCA
1 ATAAAATCAAAGTT--TGCCTCTTAAATGAGACAAACATTGATTCTCATAAAAG-TCTCCACTCT
* * * * * * * * * * * **
36529 TTTCATGATTAGGCACTATAAACACAATTTTCC-TCATCAAGATGCATGATAGTGATGGTTTTCT
63 TTTCAAGATTAGGAACCAAAAACAC-A-TTCCCTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * * *
36593 TTTGCATGGAAATCTTTTCTTTGC--C-TTATTTTCC
126 GTTGCAAGAAAAGCTTTTCTTTCCAACGTTA--TT-G
* * * ** *
36627 TTCAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCATAAAGGTCTCCACTCTTT
1 ATAAAATCAAAGTTTG-CCTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
*
36691 TCAAGATT-GTGAACCAAAAACACATTCCCTTCATTAGAATACATGACATTGATGCTTTAGG-GT
65 TCAAGATTAG-GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTT-GGTGT
* *
36754 CGCAAGAGAAGCTTTTCTTTCCAACGTTATTG
128 TGCAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * * * * *
36786 ATAAAATCAAAGTTTACCTCCTAAATGAGGCAAAC-TTGAATGCTCATACTAA-TC-CGTATTCT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTC-CACTCT
** * ** * * * * *
36848 TTTCAAGATTAGGCCCCATAAACGTAGTCTTCTT-ATATA-GATACAGGATATTGATGATTTGGT
63 TTTCAAGATTAGGAACCAAAAACACATTC-CCTTCAT-TAGGATACATGACATTGATGCTTTGGT
* * * *
36911 -TTCACAAGAAAAGC-TTT-TTTCCTATCAATTTTTG
126 GTT-GCAAGAAAAGCTTTTCTTTCC-AAC-GTTATTG
* ** * ** * * * *
36945 -TAAATTTTAAGTTCGTGCCTC--AAATGAGACGAACAAGGATT-TTAGT-AAGGATCTTCATTC
1 ATAAAATCAAAGTT--TGCCTCTTAAATGAGACAAACATTGATTCTCA-TAAAAG-TCTCCACTC
* * * * * * * * **
37005 ATTTCATGATTAGGCACTATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTCCT
62 TTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * * *
37069 TTTGCATGGAAATCTTTTCTTTGC--C-TTATTCTCC
126 GTTGCAAGAAAAGCTTTTCTTTCCAACGTTA-T-T-G
* ** * *
37103 ATAAAATCAAAGTTTGCACT-TTAAACGAGACATGCATTGATTCTCGTAAAAGTCTCCAATTCTT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCC-ACTCTT
* * * * * * *
37167 TTCAAGATTGGGAACAAAAAACTCATTCCTTTCATTAGGATACATGACAATGTTGCTTTGGTGTC
64 TTCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTT
* * *
37232 GCAAGAGAAGCTTGTCTTTCCACCGTTATTG
129 GCAAGAAAAGCTTTTCTTTCCAACGTTATTG
** * * * ** * ** *
37263 ATGGAATCAAAGTTTGTCTCTTAAATAAGGCAAACA-TGAACACTCCTGCTAA-TC-CACATTCT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCAT-AAAAGTCTC-CACTCT
* * ** * * *
37325 TTTCCAGATTAGGAACCATAAACGTAGT-CTTCTCATAAGGATACATGACATTGATGCTTTGGT-
63 TTTCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTG
* * *
37388 TTCGCAATAAACGCTTTCTTCCTTCCAAC-TT-TTG
127 TT-GCAAGAAAAGC-TT-TTCTTTCCAACGTTATTG
* * * * ** * * *
37422 -TAAAGTATC--ACTTCATTCCTC--AAATTAGACAAACATGGATTCT-AGCAACGATCTTCATT
1 ATAAA--ATCAAAGTT--TGCCTCTTAAATGAGACAAACATTGATTCTCATAAAAG-TCTCCACT
* ** * * * * * ** * *
37481 CATTTCGTGATTAGGCACTATTAAACACATTCTCC-TCATTAGGATAAAGGGGATTGATGGTTTT
61 CTTTTCAAGATTAGGAACCA-AAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTG
* * * * * * *
37545 CTTTTGCATCG-AAATCTTTTC-TTCGCCACATT-TTCC
124 GTGTTGCA-AGAAAAGCTTTTCTTTC-CAACGTTATT-G
* * * * * * ** *
37581 TTAAACTAAAAGTTTGTACT-TTAAAAGTGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTT
1 ATAAAATCAAAGTTTG-CCTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
* * * * * *
37645 CCAAGATTAGGATCCAAAAATACTTTCCCTTCATTAGGATACATGACACTGGTGCTTTGGTGTTG
65 TCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * *
37710 CAAGAGAAGCTTTTCTTTCCACCGTTAATG
130 CAAGAAAAGCTTTTCTTTCCAACGTTATTG
** * * * * * * *
37740 ATAAAATCAAAGTTTATCTCTTAAATAAGACAAACA-TGAATACTCTTACTAA-TCCCCATTGTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTCCACTCTT
** * * ** * ** * *
37803 TTCTGGATTAGGCACCATAAACTTAGTCTTTTTA-TATGGATACATGATATTGATGCTTTGGT-T
64 TTCAAGATTAGGAACCAAAAACACATTCCCTTCATTA-GGATACATGACATTGATGCTTTGGTGT
* * *** *
37866 TCGCAAGATACGCTTATGTCCCACCAA-ATT-TGTG
128 T-GCAAGAAAAGCTT-T-TCTTTCCAACGTTAT-TG
* * * * * *
37900 -TAAATTCTAAGTTCGTGCCTC--AAATGAGACAAACATGGATTCT-AGT-AAGGATCTTCATTC
1 ATAAAATCAAAGTT--TGCCTCTTAAATGAGACAAACATTGATTCTCA-TAAAAG-TCTCCACTC
* * * *** * * * * * **
37960 ATTTCATGATTAGGCACTGTAAACACATTCTCC-TCCTCAGGATGCATGATATTGATGGTTTTCT
62 TTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * * *
38024 TTTGCATGTAAATCTTTTCTTTGC--C-TTATTTTCT
126 GTTGCAAGAAAAGCTTTTCTTTCCAACGTTA--TT-G
* ** * * **
38058 ATATAATCAAAGTTTGCACT-TTAAATGAGACATGCATTGATTCTCGTAATAGTCTCCGTTCTTT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
* * *
38122 TCAAGATTAGGAGCCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
65 TCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * *
38187 CAAGAAAAGCTTGTCTTTCCACCATTATTG
130 CAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * * * * * *
38217 GTAGAATCAAAG-TT-CTCTCTTAAATAAGACAAAC-GTGAATACTCATACTAA-TCCCCAATCT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTCCACTCT
* * * ** * * * *
38278 TTTCTAGGTTAGGCAA-CATAAACTTAGT-CTTCTCA-TATGGATACATGATATTAATGCTTTGG
63 TTTCAAGATTAGG-AACCAAAAACACATTCCCT-TCATTA-GGATACATGACATTGATGCTTTGG
* * *
38340 T-TTCGCAA-AATATGC-TTTCTTCCCACCAAC-TT-GTG
125 TGTT-GCAAGAA-AAGCTTTTCTT---TCCAACGTTATTG
* * * ** *
38375 -TAAAGT-ATGAGTTCATTG-CTC--AAATGAGACAAACA-TGCATTCGT-GT-AGGGATCTTCA
1 ATAAAATCA-AAG-T--TTGCCTCTTAAATGAGACAAACATTG-ATTC-TCATAAAAG-TCTCCA
* * ** * * * * * * ** *
38432 TTCATTTCGTGATTAGGCACTATAAACACATTCTCC-GCTTTAGGATAAATGATGTTGATGGTTT
59 CTCTTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTT
** * ** * * * *
38496 TCTTTTGCGTGGAAATCTTTTCTTTGC--C-TTATTTTCC
123 GGTGTTGCAAGAAAAGCTTTTCTTTCCAACGTTA--TT-G
* ** *
38533 TTAAAATCAAAGTTTGCC-CTTTAAATGAGACCTACATTGATTCTCGTAAAAGTCTCCACTCTTT
1 ATAAAATCAAAGTTTGCCTC-TTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
* * *
38597 TCAAGATT-GTAAACCAAAAACACATTTCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
65 TCAAGATTAG-GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTT
* *
38661 GCAATAGAAGCTTTTCTTTCCAACGTTATTG
129 GCAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * * * *
38692 GTAAAATCAAAGTTTGCCTCTTAAATAAGACAAACA-TGAATACTCATACTAA-TCCCCATTCTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTCCACTCTT
* * * * * * * * * * *
38755 TTTAGGATTAGGCACCATAAACATAGT--CTTCCCATAAGGATACAGGATATTAATGATTTGGT-
64 TTCAAGATTAGGAACCAAAAACACATTCCCTT--CATTAGGATACATGACATTGATGCTTTGGTG
* * * * *
38817 TTCGCAAGAAACGCTTTT-TTCCCATCAATTTTTG
127 TT-GCAAGAAAAGCTTTTCTTTCCAAC-GTTATTG
* * * * * * *
38851 -TAAATTCTAAGTTCGTGCCTC--AAATGAGACAAATATGGATTCT-AGT-AAGGATCTTCATTC
1 ATAAAATCAAAGTT--TGCCTCTTAAATGAGACAAACATTGATTCTCA-TAAAAG-TCTCCACTC
* * * * * ** * * * * * **
38911 ATTTCATGATTAGGCACTATAAACATGTTCTCC-TCATGAAGATGCATGATATTGATGGTTTTTT
62 TTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGAT-GCTTTGG
* ** * * * *
38975 TTTTGCATTAAAATCTTTTTTTTCCTTA--TT-TTCC
125 TGTTGCAAGAAAAGCTTTTCTTTCC-AACGTTATT-G
* * * ** * ** * *
39009 TTAAAATCAAAGTTTGTACT-TTAAATGCGACATGCATTCATTCTTGTAAAAGTCTCCATTATTT
1 ATAAAATCAAAGTTTG-CCTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
* * * * * *
39073 TTAAG-TTGGGAACCAAAAACACATTCCCTTCATTAGGAAACATGACAATGATGCTTTGTTGTCG
65 TCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * *
39137 CAA-AAGAAGCCTGTCTTTCCACCGTTATTG
130 CAAGAA-AAGCTTTTCTTTCCAACGTTATTG
* * * * * * * * ** *
39167 ATAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACCTTAATACTCATACTAA-TCGACATTCTTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTGATTCTCATA-AAAGTCTCCACTCTTT
** * * * * * * * * *
39231 TCTGGTTTAGGCACCATAAACATAGT--CTTCTTATACGGATAAATGATATTGATGCTTTGGTTT
65 TCAAGATTAGGAACCAAAAACACATTCCCTTCAT-TA-GGATACATGACATTGATGCTTTGGTGT
* * * * * *
39294 TGCTAGAAATGC-TTTCTTCCCACCAATTTTTG
128 TGCAAGAAAAGCTTTTCTTTCCAAC-GTTATTG
* * ** * * *
39326 -TAAAGTCTAAGTTTTTGCCTC--AAATGAGACAAACAGGGATTCTGGCA-AAATGATCTTCATT
1 ATAAAATCAAAG--TTTGCCTCTTAAATGAGACAAACATTGATTCT--CATAAAAG-TCTCCACT
** * * * * * * * * * *
39387 CGTTTT-GTGATTAGGCACTATAAACAC-TTTCTTCTCATTAGCATAAATGATATTGACGGTTT-
61 C-TTTTCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTG
* * * * *
39449 -TCATTCGCACGAAAATCTTTTCTTTCC--C-CTATTTT
124 GT-GTT-GCAAGAAAAGCTTTTCTTTCCAACGTTA-TTG
* * * * ** * **
39484 ACTTAAAATCAAAGTTTGTCC-CTTCAAT-AGGGCAAGCATTGACTCTTGTAATAGTCTCTTTTT
1 A--TAAAATCAAAGTTTG-CCTCTTAAATGA-GACAAACATTGATTCTCATAAAAGTCTC---CA
* * * * * * *
39547 TTTTTTTCAAAATTAAGAACCAAAAATAGATTCCCTTCATTAGGATACATGACATTGATGCCTTG
59 CTCTTTTCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTG
** * * * *
39612 GTGTCACAAGAGAAGCTTTTCTTTCTATCGATATTG
124 GTGTTGCAAGAAAAGCTTTTCTTTCCAACGTTATTG
** * * * * *
39648 ATAAAATCAAAGTTTTTCTCTTAAGTAAGACAAACA-TGAATACTCATACAAA-TCCCCATTCTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTCCACTCTT
* * * * * ** ** *
39711 TTC-AGTATTAGGCACCATAAACATAGT-CTTCTCAGAACAATACATGATATTGATGCTTTGGT-
64 TTCAAG-ATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTG
* * * * *
39773 TTCGCAAGAAATGC-TTTCTTCCCACCTATTTTTG
127 TT-GCAAGAAAAGCTTTTCTTTCCAAC-GTTATTG
** * * * * *
39807 -TAACGT-ATGAGTTCAAT-CCTC--AAATGAGACAAACATGGATTCT-AGT-AAGGATCTTCAT
1 ATAAAATCA-AAGTT---TGCCTCTTAAATGAGACAAACATTGATTCTCA-TAAAAG-TCTCCAC
** * * * * * * * *
39865 TCATTTT-GTGATTAGGCACTATAAATACATTCTCC-TCTTTAGGATAAATGATATTGATGGTTT
60 TC-TTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGAT-GCTT
** * * * * * * *
39928 TTTTTTTGCATGGAAATCTTTTCCTTGC--C-TTATTTTCC
122 TGGTGTTGCAAGAAAAGCTTTTCTTTCCAACGTTA--TT-G
* * ** * * *
39966 AAAAAATCAAAGATTGCACT-TTAAATGAGACATGCACTGATTCTCGTAAAAGTCTCCATTCTTT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
* * * * * * *
40030 TCAAGATTAGGAACCAAAAACACATTCCTTTCATTGGGATACGTGGCAATGTTGCTTTGGTGTCG
65 TCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * *
40095 CAAGAAAAGCTTGTCTTTCCACCGTTACTG
130 CAAGAAAAGCTTTTCTTTCCAACGTTATTG
** * * * * * *
40125 ATGGAATCAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATACTTATACTAA-TC-CACATTCT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTC-CACTCT
* * * * * * *
40187 TTTCCAA-ATTAGGCACCATAAACATAGT--CTTCTTATACAGATACATGATATTGATGCTTTGG
63 TTT-CAAGATTAGGAACCAAAAACACATTCCCTTCAT-TA-GGATACATGACATTGATGCTTTGG
* * * * * *
40249 T-TTCGCAAGATACGC-TTTCTTCCCACCAATTTTTG
125 TGTT-GCAAGAAAAGCTTTTCTTTCCAAC-GTTATTG
* * * * * *
40284 -TAAATTCTAAGTTCGTGCCTC--AAATGAGACAAACATGGATTCT-AGT-AAGGATCTTCATTC
1 ATAAAATCAAAGTT--TGCCTCTTAAATGAGACAAACATTGATTCTCA-TAAAAG-TCTCCACTC
* * * * * * * * * * **
40344 ATTTCATGATTAGGCACTATAAATACATTCTCC-TCAATAGGATGCATGATATTGATGGTTTTCT
62 TTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * *
40408 TTTGCATGGAAATG-TTTTCTTTGC--C-TTATTTTCC
126 GTTGCA-AGAAAAGCTTTTCTTTCCAACGTTA--TT-G
* * ** * * ** *
40442 ATAAAATCAAAGTTTGCAC-GTTAAATTAGACATGCATTGATTCTCGTATAAGTCTTTATTCTTT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
* * * * * * *
40506 TCAAGAATAGGAACCAAAAACACATTCCTTTCATTAGTATACAAGACAATGTTGCTTTGGTGTCG
65 TCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * *
40571 CAAG-AGAGCTTGTCTTTCCACCGTTATTG
130 CAAGAAAAGCTTTTCTTTCCAACGTTATTG
** * * * * ** * * * *
40600 ATGGAATCAAAG-TTGTCTCTTAAATAAGAAAAACCTAAATACTCATACTAA-TCGCCATTCTTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTGATTCTCATA-AAAGTCTCCACTCTTT
* * * * * * * * *
40663 TCAGGATTAGGCACCATAAACATAGTCTACCTT--TAATGATACATGATATTGACGCTTTGGT-T
65 TCAAGATTAGGAACCAAAAACACA-T-TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGT
* * * * * * *
40725 TCCCAAGATATGC-TTTCTTCCCACCAATTTTTG
128 T-GCAAGAAAAGCTTTTCTTTCCAAC-GTTATTG
* * * ** * * *
40758 -TAAATTCTAAGTTCTGCCTC--AAATGAGACAAACATGGATTCT-AGT-AGGGATCTTCATTCA
1 ATAAAATCAAAGTT-TGCCTCTTAAATGAGACAAACATTGATTCTCA-TAAAAG-TCTCCACTCT
* * * * * * * * * ** *
40818 TTTCATGATTAGGCACTATAAACACATTCTCC-TCGTCAGGATGCATGATATTGATGGTTTTCTC
63 TTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTG
* * *
40882 TTGCATGGAAAA-CTTTTCTTTGC--C-TTATTTTCC
127 TTGCA-AGAAAAGCTTTTCTTTCCAACGTTA--TT-G
**
40915 ATAAAATCAAAGTTTGCACT-TTAAATGAGACATGCATTGATTCTCATAACAA-TCTCCACTCTT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAA-AAGTCTCCACTCTT
* *
40978 TTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGGTG-TGTTGGTGT
64 TTCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT-TTGGTGT
* * * *
41042 CGCAAGAAAAGCTTGTCTTTCCACCCTTATTG
128 TGCAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * * *** *
41074 ATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAATACTCATGCTAGTC-CCTATTCTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCATAAAAGTCTCC-ACTCTT
* * * * ** * * *
41136 TTCAGGATCAGGCACC-ACAA-ACATAGCCTTCTTTTAAGGAAACATGATATTGATGCTTTGGT-
64 TTCAAGATTAGGAACCAAAAACACATTCCCTTC-ATT-AGGATACATGACATTGATGCTTTGGTG
* * *
41198 TTCGGAAGATATGC-TTTCTTCCCTCCAA--TT-TGTG
127 TT-GCAAGAAAAGCTTTTCTT---TCCAACGTTAT-TG
* * * * * * *
41232 -TAAATTCTAAGTTCGTGCCTC--AAATGAGACAAACATGGATTCT-ATTAAGGATCTTCACTCA
1 ATAAAATCAAAGTT--TGCCTCTTAAATGAGACAAACATTGATTCTCATAAAAG-TCTCCACTCT
* * * * * * * * * ** *
41293 TTTCATGATTAGGCACTATAAATACATTCTCC-TCATCAGCATACATGATATTGATGGTTTTCTT
63 TTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * *
41357 TTGCATGGAAATCTTTTCTTTGC--C-TTATTTTCC
127 TTGCAAGAAAAGCTTTTCTTTCCAACGTTA--TT-G
* ** * * *
41390 ATAAAATCAAAGTTTGCACT-TTAAATGTGACATGCATTGATTCTCGTAACAGTCTCCATTCTTT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
* * * * *
41454 TCAAGATTAGGAACCAAAAACACAATCCTTTTATTAGGATACATCACATTGATGCTTTGGTGTCG
65 TCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* ** **
41519 CAAGAGAAGCTGGTCTTTCCCCCGTTATTG
130 CAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * * * * *
41549 ATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAATACTCATACTAA-TCCCCATTCTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTCCACTCTT
* * * * * * * *
41611 TTCTAGATTAGGCACCATAAACATAGT--CTTCTTATACAGATACATGATATTGATGCTTTGGT-
64 TTCAAGATTAGGAACCAAAAACACATTCCCTTCAT-TA-GGATACATGACATTGATGCTTTGGTG
* * * * * *
41673 TTCGCAAGATACGC-TTTCTTCCCACCAATTTTTG
127 TT-GCAAGAAAAGCTTTTCTTTCCAAC-GTTATTG
* * * * * ** * *
41707 -TAAATTCTAAGTTCGTTCCTC--AAATGACACAAACATGGATTCT-AGT-AGGGATCTTCATTC
1 ATAAAATCAAAGTT--TGCCTCTTAAATGAGACAAACATTGATTCTCA-TAAAAG-TCTCCACTC
* ** * * * * * * * * **
41767 ATTTCGTGATTAGGGACTATAAACACATTCTCC-TCGTCAGGATGCATGATATTGATGGTTTTCT
62 TTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGT
* * * *
41831 TTTGCATGGAAAA-CTTTTCTTTGC--C-TTATTTTCC
126 GTTGCA-AGAAAAGCTTTTCTTTCCAACGTTA--TT-G
** * * * *
41865 ATAAAATCAAAGTTTGCACT-TTAAATGAGACATGCATTAATTCTCGTAACAA-TCTCCATTATT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAA-AAGTCTCCACTCTT
* * * * *
41928 TTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAGGATAAATGACATTGGTGCGTTGGTGTC
64 TTCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTT
* * * *
41993 GGAAGAAAAGCTTGTCTTTCCACCGGTATTG
129 GCAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * * ** * *
42024 ATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAATACTCATGCTAA-TCCCCATTCTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCAT-AAAAGTCTCCACTCTT
* * * ** * *
42086 TTCAAGATCAGGCACC-ACAA-ACATAGCCTTCTTTTAAGGATACATGATATTGATGCTTTGGT-
64 TTCAAGATTAGGAACCAAAAACACATTCCCTTC-ATT-AGGATACATGACATTGATGCTTTGGTG
* * * * * *
42148 TTCGCAAGATACGC-TTTCTTCCCACCAATTTTTG
127 TT-GCAAGAAAAGCTTTTCTTTCCAAC-GTTATTG
* * * * ** * * * *
42182 -TAAATTCTAAGTTCATGCCTC--AAATGAGACAAACGTGGATTCTTGT-AAGGATCTTCATTCA
1 ATAAAATCAAAGTT--TGCCTCTTAAATGAGACAAACATTGATTCTCATAAAAG-TCTCCACTCT
* * * * * * * * **
42243 TTTCATGATTAGGCACTATAAACACATTCTCC-TCATCAGGATGCATGAAATTGATGGTTTTCTT
63 TTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGAT-GCTTTGGT
* * * * * *
42307 TTTGCATCG-AAATCTTTTCATTGC--C-TTATTTTCC
126 GTTGCA-AGAAAAGCTTTTCTTTCCAACGTTA--TT-G
* ** * * * *
42341 ATAAAATCAAAGTTTTCACT-TTAAATGAGACACGCATTGATTCTCATAACAGCCTCAATTCTTT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
* * *
42405 TCAAGATTAGGATCCAAAAACACATT-CCTCTCATTAGGATGCATGACATTGATGCTTTGGTGTC
65 TCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGTT
* * * **
42469 GCAAGAGAAGCTTGTATTTCCCCCGTTATTG
129 GCAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * * * * * *
42500 GTAGAATCAAAG-TTGTCTCTTAAATAAGACAAAC-TTGAATACTCATACTAA-TCCCCATTCTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTCCACTCTT
* * * * * * * *
42562 TTCAGGATTAGGCACCATAAACATAGT--CTTCTTTTAAGGGTACATGATATTGATGCTTTGGT-
64 TTCAAGATTAGGAACCAAAAACACATTCCCTTC-ATT-AGGATACATGACATTGATGCTTTGGTG
* * * *
42624 TTCGCAAGATACG-TTTT-TTTCCCACCAATT-TGTG
127 TT-GCAAGAAAAGCTTTTCTTT-CCAAC-GTTAT-TG
* * * * * *
42658 -TAAATTCTAAGTTTGTGCCTC--AAATGAGACAAACATGGATTCT-AGT-AAGGATCTTCATTC
1 ATAAAATCAAAG-TT-TGCCTCTTAAATGAGACAAACATTGATTCTCA-TAAAAG-TCTCCACTC
* * ** * * * * * * * **
42718 ATTCCGTGATTAGGCACTATAAACACATTCTCC-TCATCAGGATGCATGATATTGATGGTTTTCT
62 TTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGT
* * * *
42782 TTTGCACA-AAAATCTTTTCTTTGC--C-TTATTTTCC
126 GTTGCA-AGAAAAGCTTTTCTTTCCAACGTTA--TT-G
* * * *
42816 ATAAAATCAAAGTTTGCACT-TTAAATGAGACACACATTGATTCTCATAACAGCCTCCATTCTTT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
* * * * * *
42880 TCAAGATTAGGATCCAAAAACAAATTTCTTTCA-TACGGATGCATGACATTGATGCTTTGGTGTC
65 TCAAGATTAGGAACCAAAAACACATTCCCTTCATTA-GGATACATGACATTGATGCTTTGGTGTT
* * * * ** *
42944 GCAAGAGAAGGTTGTCTTACCCCCGTTACTG
129 GCAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * ** * * * ** * ** *
42975 ATAGAATCAAAG-TCGTCTCAAAAATAAGACAAAC-GTGAATACTCATGCTAA-TCCCCTTTCCT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCAT-AAAAGTCTCCACTCTT
** * * * *** * * *
43037 TTCTGGATTAGGCACC--AGACGCATAGTCTTCTTATACGGATACATGATATGGATGCTTTGGT-
64 TTCAAGATTAGGAACCAAAAACACATTCCCTTCAT-TA-GGATACATGACATTGATGCTTTGGTG
* * * * * *
43099 TTCACAAGATACGC-TTTCTTCCCACCAATT-TGTG
127 TT-GCAAGAAAAGCTTTTCTTTCCAAC-GTTAT-TG
* * * * ** ** * *
43133 -TAAAGT-ATGAGTTCATTG-CTC--AAATAAGACAAACATGGATTCTTGT-AGGGATCTTCATT
1 ATAAAATCA-AAG-T--TTGCCTCTTAAATGAGACAAACATTGATTCTCATAAAAG-TCTCCACT
* ** * ** * * * * * * * **
43192 CATTTCGTGATTAGGCATTATAAATACATTCTCC-GCTTTAGGATAAATGATATTGATGGTTTTC
61 CTTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGG
* * * * *
43256 T-TTCGCATGAAAATCATTTCTTTGC--C-TTATTT
125 TGTT-GCAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * ** *
43288 ACCTTAAAATCATAGTTTGTACT-TTAAATAAGACATGCATTGATTCTCATAAAAGTCTCCATTC
1 A---TAAAATCAAAGTTTG-CCTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTC
* * ** *
43352 TTTGCAAGATTAGGATCCAAAAATGCATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
62 TTTTCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * *
43417 TCGCAAGAGAAGCTTGTCTTTCCACCGTTATTG
127 TTGCAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * * * * * *
43450 ATAGAATCAAAG-TTGTCTCTTAAATAAGGCAAACA-TGAATACTCATACTAA-TCCCCATTCTT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTG-ATTCTCATA-AAAGTCTCCACTCTT
** * ** * * * ** *
43512 TTCTGGATTAGGCACCCTAAACATAGT--CTTCTTATACGGATACATGATTTTGATGCTTTGCT-
64 TTCAAGATTAGGAACCAAAAACACATTCCCTTCAT-TA-GGATACATGACATTGATGCTTTGGTG
* * * * * *
43574 TTTCTAAGATACGC-TTTCTTCCCATCAATT-TGTG
127 TTGC-AAGAAAAGCTTTTCTTTCCAAC-GTTAT-TG
* * * * *
43608 -TAAATTCTAAGTTCGTGCCTC--AAATGAGACAAACATGGATTCT-AGT-AAGGATCTTCACTC
1 ATAAAATCAAAGTT--TGCCTCTTAAATGAGACAAACATTGATTCTCA-TAAAAG-TCTCCACTC
* * * *** * * * * * * **
43668 ATTTCATGATTAGGCACTGTAAACATATTCTCC-TGATCAGCATACATGATATTGATGGTTTTCT
62 TTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGT
* * * *
43732 TTTGCACAG-AAATCTTTTCTTTGC--C-TTATTTTCC
126 GTTGCA-AGAAAAGCTTTTCTTTCCAACGTTA--TT-G
* ** * * * *
43766 ATAAAATCAAAGTTTGCACT-TTAAATGAGTCATGCATTGATTCTCGTAACAGTCTCTATTCTTT
1 ATAAAATCAAAGTTTGC-CTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTT
*** * *
43830 TCAAGATTAGGAACCAAAAACACATTTATTTCATTAGGATACATCACATTGATGCTTTGGTGTCG
65 TCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTG
* * **
43895 CAAGAGAAGCTTGTCTTTCCCCCGTTATTG
130 CAAGAAAAGCTTTTCTTTCCAACGTTATTG
* * * *
43925 ATAGAATCAAAG-TTGTCTCTTAAATAAAACAAACAT
1 ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACAT
43961 GAATACTCAT
Statistics
Matches: 6031, Mismatches: 1915, Indels: 1307
0.65 0.21 0.14
Matches are distributed among these distances:
152 2 0.00
154 9 0.00
155 53 0.01
156 155 0.03
157 504 0.08
158 2083 0.35
159 2311 0.38
160 653 0.11
161 113 0.02
162 130 0.02
163 11 0.00
164 5 0.00
165 2 0.00
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (159 bp):
ATAAAATCAAAGTTTGCCTCTTAAATGAGACAAACATTGATTCTCATAAAAGTCTCCACTCTTTT
CAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGC
AAGAAAAGCTTTTCTTTCCAACGTTATTG
Found at i:38530 original size:475 final size:475
Alignment explanation
Indices: 35044--87501 Score: 22008
Period size: 475 Copynumber: 109.9 Consensus size: 475
35034 CCTTATTTTA
* * * * ** *
35044 GTAAATTCTAAGTTCGTACCTCAAGTGAAACAAATTTGGATTCTAGTAAAGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* *
35109 CATGATTAGGCACTATAAACACATTCTCCTCGTCAGGATGCATGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* *
35174 ATGAAAATCTTTTCTTTGCCTTTTTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * *
35239 TTGATTCTCGTAACAGTCTCCATTCTTTACAAGATTAGGAACCAAAAACACACTCTTTTCATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* * *
35304 GATACATGGCATTGATGCTTTGGTGTTGCAAGAGAAGCTTGTCTTTCCGCCGTTATTGATAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
* * *
35369 CAAAGTTGTGTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTGTTTTCTAGGTTA
326 CAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATTA
* * *
35434 GGCACCATAAACTTAGTCTTCTTATACGTATACATGATATTGATGCTTTAGTTTCGCAAGATACG
391 GGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACG
35499 CTTT-TGTCCCACCAATTTGT
456 CTTTCT-TCCCACCAATTTGT
*
35519 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
*
35584 CATGATTAGGCACTATAAACAC--TC-CCTCATCAGGATGCATGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* * * *
35646 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAACTTTTCACATTAAATGAGACATGCG
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * ** *
35711 TTAATTCTCGTAATAGTCCCCATTCTTTTCAAGATTAGGAATGAAAAACACATTTCTTTCATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* * * *
35776 GATAAATGACATTGATGCTATGGTGTCGTAAGAGAAGCTTGTCTTTCCACCGCTATTGATAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
*
35841 CAAAGTTGTCTTTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTT-TAGGATT
326 CAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-GATT
* * * *
35905 TGGCACCATAAACATAGTCTTCTTATAAGGATACACGATAATGATGCTTTGGTTTCGCAAGATAC
390 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATAC
*
35970 ACTTTCTTCCCACCAATTTGT
455 GCTTTCTTCCCACCAATTTGT
* * * *
35991 GTAAA-GCATGAGTTCATTG-CTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCAT
1 GTAAATTC-TAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCAT
* * * * *
36054 TTCGTGATTAGGCACTATAAACACATTCTCCGCTTTAGGATAAATGATATTGATGGTTTTCTTTT
64 TTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTT
* * * *
36119 GCATGAAAATCTTTTCTTTGCCTTATTTTCCATGAAATCAAACTTTGTACTTTAAATGAGACATG
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
* * *
36184 CATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATT-GTGAACCAAAAATACATTCCCTTCAT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACATTCCTTTCAT
* * * * * *
36248 TAGGATACATGACATTGACGCTTTGGTGTGGCAAGAAAAGCTTTTCTTTCCAACGTTATTGATAA
258 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAG
* *
36313 AATCAAAGTTTGCCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAG
323 AATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAG
* * * * * *
36378 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATATAGGATATTGATGATTTGGTTTTGCAAGA
387 ATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * *
36443 AACACTTTTTTCCCATCAATTTTT
452 TACGCTTTCTTCCCACCAATTTGT
* * * * ***
36467 GTAAATTCTAAGTTCATACCTCAAATGAGACAAACATGGATTCTGGTAAAGATCTTCGCCCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * *
36532 CATGATTAGGCACTATAAACACAATTTTCCTCATCAAGATGCATGATAGTGATGGTTTTCTTTTG
66 CATGATTAGGCACTATAAACAC-ATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* * *
36597 CATGGAAATCTTTTCTTTGCCTTATTTTCCTTCAAATCAAAGTTTGTACTTTAAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* * * *
36662 ATTGATTCTCATAAAGGTCTCCACTCTTTTCAAGATT-GTGAACCAAAAACACATTCCCTTCATT
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACATTCCTTTCATT
* * * *
36726 AGAATACATGACATTGATGCTTTAGG-GTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAA
259 AGGATACATGACATTGATGCTTT-GGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAG
* * * * * ** *
36790 AATCAAAGTT-TACCTCCTAAATGAGGCAAACTTGAATGCTCATACTAATCCGTATTCTTTTCAA
323 AATCAAAGTTGT--CTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA
* * ** * * *
36854 GATTAGGCCCCATAAACGTAGTCTTCTTATATAGATACAGGATATTGATGATTTGGTTTCACAAG
386 GATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * *
36919 AAAAGCTTTTTTCCTATCAATTTTT
451 ATACGCTTTCTTCCCACCAATTTGT
* * * * *
36944 GTAAATTTTAAGTTCGTGCCTCAAATGAGACGAACAAGGATTTTAGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * *
37009 CATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTCCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* *
37074 ATGGAAATCTTTTCTTTGCCTTATTCTCCATAAAATCAAAGTTTGCACTTTAAACGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * *
37139 TTGATTCTCGTAAAAGTCTCCAATTCTTTTCAAGATTGGGAACAAAAAACTCATTCCTTTCATTA
196 TTGATTCTCGTAAAAGTCTCC-ATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* * *
37204 GGATACATGACAATGTTGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATGGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* * * * * *
37269 TCAAAGTTTGTCTCTTAAATAAGGCAAACATGAACACTCCTGCTAATCCACATTCTTTTCCAGAT
325 TCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGAT
* * * * * * *
37334 TAGGAACCATAAACGTAGTCTTCTCATAAGGATACATGACATTGATGCTTTGGTTTCGCAATAAA
389 TAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
**
37399 CGCTTTCTTCCTTCCAACTTT-T
454 CGCTTTCTTCCCACCAA-TTTGT
* * * * * * *
37421 GTAAAGTATCACTTCATT-CCTCAAATTAGACAAACATGGATTCTAGCAACGATCTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * * **
37485 TCGTGATTAGGCACTATTAAACACATTCTCCTCATTAGGATAAAGGGGATTGATGGTTTTCTTTT
65 TCATGATTAGGCACTA-TAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTT
* * ** * * * * * *
37550 GCATCGAAATCTTTTCTTCGCCACATTTTCCTTAAACTAAAAGTTTGTACTTTAAAAGTGACATG
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
* * * * * *
37615 CATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGATTAGGATCCAAAAATACTTTCCCTTCATT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
* * * * * *
37680 AGGATACATGACACTGGTGCTTTGGTGTTGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* * * *
37745 ATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCTTACTAATCCCCATTGTTTTCTGGA
324 ATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
* * *
37810 TTAGGCACCATAAACTTAGTCTTTTTATATGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
*
37875 ACGCTTAT-GTCCCACCAAATTTGT
453 ACGCTT-TCTTCCCACC-AATTTGT
*
37899 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * *
37964 CATGATTAGGCACTGTAAACACATTCTCCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* * *
38029 ATGTAAATCTTTTCTTTGCCTTATTTTCTATATAATCAAAGTTTGCACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * *
38094 TTGATTCTCGTAATAGTCTCCGTTCTTTTCAAGATTAGGAGCCAAAAACACATTCCTTTCATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* * *
38159 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCATTATTGGTAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
* * * *
38224 CAAAGTTCTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCCCAATCTTTTCTAGGTTA
326 CAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATTA
* * * * * * *
38289 GGCAACATAAACTTAGTCTTCTCATATGGATACATGATATTAATGCTTTGGTTTCGCAAAATATG
391 GGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACG
*
38354 CTTTCTTCCCACCAACTTGT
456 CTTTCTTCCCACCAATTTGT
* * * * *
38374 GTAAAGTATGAGTTCATTG-CTCAAATGAGACAAACATGCATTCGT-GTAGGGATCTTCATTCAT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTC-TAGTAAGGATCTTCATTCAT
* * * * * *
38437 TTCGTGATTAGGCACTATAAACACATTCTCCGCTTTAGGATAAATGATGTTGATGGTTTTCTTTT
64 TTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTT
* * * * *
38502 GCGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGCCCTTTAAATGAGACCTA
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
* *
38567 CATTGATTCTCGTAAAAGTCTCCACTCTTTTCAAGATT-GTAAACCAAAAACACATTTCC-TTCA
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACA-TTCCTTTCA
* * * *
38630 TTAGGATACATGACATTGATGCTTTGGTGTCGCAATAGAAGCTTTTCTTTCCAACGTTATTGGTA
257 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATA
* *
38695 AAATCAAAGTTTGCCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTT-TA
322 GAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA
** * * * *
38759 GGATTAGGCACCATAAACATAGTCTTCCCATAAGGATACAGGATATTAATGATTTGGTTTCGCAA
386 -GATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * *
38824 GAAACGCTTTTTTCCCATCAATTTTT
450 GATACGCTTTCTTCCCACCAATTTGT
* *
38850 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
** * * * *
38915 CATGATTAGGCACTATAAACATGTTCTCCTCATGAAGATGCATGATATTGATGGTTTTTTTTTTG
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGG-TTTTCTTTTG
** * * * *
38980 CATTAAAATCTTTT-TTTTCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGCGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* * * * * *
39044 ATTCATTCTTGTAAAAGTCTCCATTATTTTTAAG-TTGGGAACCAAAAACACATTCCCTTCATTA
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* * * * *
39108 GGAAACATGACAATGATGCTTTGTTGTCGCAAAAGAAGCCTGTCTTTCCACCGTTATTGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* * * ** * *
39173 TCAAAGTTTGTCTCTTAAATAAGAAAAACCTTAATACTCATACTAATCGACATTCTTTTCTGGTT
325 TCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGAT
* * * *
39238 TAGGCACCATAAACATAGTCTTCTTATACGGATAAATGATATTGATGCTTTGGTTTTGCTAGAAA
389 TAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
* *
39303 TGCTTTCTTCCCACCAATTTTT
454 CGCTTTCTTCCCACCAATTTGT
* * * * * * *
39325 GTAAAGTCTAAGTTTTTGCCTCAAATGAGACAAACAGGGATTCTGGCAAAATGATCTTCATTCGT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAG--TAAGGATCTTCATTCAT
** * * * * * * * *
39390 TTTGTGATTAGGCACTATAAACACTTTCTTCTCATTAGCATAAATGATATTGACGGTTTTCATTC
64 TTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTT
* * * * * * * * *
39455 GCACGAAAATCTTTTCTTTCCCCTATTTTACTTAAAATCAAAGTTTGTC-CCTTCAAT-AGGGCA
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTG-CACTTTAAATGA-GACA
* * * * ** * * * * * *
39518 AGCATTGACTCTTGTAATAGTCTCTTTTTTTTTTTTCAAAATTAAGAACCAAAAATAGATTCCCT
192 TGCATTGATTCTCGTAAAAGTCTC---CATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTT
* * * * * *
39583 TCATTAGGATACATGACATTGATGCCTTGGTGTCACAAGAGAAGCTTTTCTTTCTATCGATATTG
254 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTG
* * * *
39648 ATAAAATCAAAGTTTTTCTCTTAAGTAAGACAAACATGAATACTCATACAAATCCCCATTCTTTT
319 ATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTT
* * *
39713 C-AGTATTAGGCACCATAAACATAGTCTTCTCAGAAC-AATACATGATATTGATGCTTTGGTTTC
383 CTAG-ATTAGGCACCATAAACATAGTCTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTC
* * * *
39776 GCAAGAAATGCTTTCTTCCCACCTATTTTT
446 GCAAGATACGCTTTCTTCCCACCAATTTGT
** * * *
39806 GTAACGTATGAGTTCAAT-CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
** * * * * *
39870 TTGTGATTAGGCACTATAAATACATTCTCCTCTTTAGGATAAATGATATTGATGGTTTTTTTTTT
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGG-TTTTCTTTT
* * *
39935 GCATGGAAATCTTTTCCTTGCCTTATTTTCCAAAAAATCAAAGATTGCACTTTAAATGAGACATG
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
*
40000 CACTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
* * * * * * * *
40065 GGGATACGTGGCAATGTTGCTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTACTGATGGA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* * * *
40130 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTTATACTAATCCACATTCTTTTCCAAA
324 ATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
*
40195 TTAGGCACCATAAACATAGTCTTCTTATACAGATACATGATATTGATGCTTTGGTTTCGCAAGAT
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
*
40260 ACGCTTTCTTCCCACCAATTTTT
453 ACGCTTTCTTCCCACCAATTTGT
*
40283 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* *
40348 CATGATTAGGCACTATAAATACATTCTCCTCAAT-AGGATGCATGATATTGATGGTTTTCTTTTG
66 CATGATTAGGCACTATAAACACATTCTCCTC-ATCAGGATACATGATATTGATGGTTTTCTTTTG
* * *
40412 CATGGAAATGTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACGTTAAATTAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* ** *
40477 ATTGATTCTCGTATAAGTCTTTATTCTTTTCAAGAATAGGAACCAAAAACACATTCCTTTCATTA
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* * * * *
40542 GTATACAAGACAATGTTGCTTTGGTGTCGCAAGAG-AGCTTGTCTTTCCACCGTTATTGATGGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* * * *
40606 TCAAAGTTGTCTCTTAAATAAGAAAAACCTAAATACTCATACTAATCGCCATTCTTTTC-AGGAT
325 TCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-GAT
* ** * *
40670 TAGGCACCATAAACATAGTCTACCTT-TAATGATACATGATATTGACGCTTTGGTTTCCCAAGAT
389 TAGGCACCATAAACATAGTCT-TCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* *
40734 ATGCTTTCTTCCCACCAATTTTT
453 ACGCTTTCTTCCCACCAATTTGT
*
40757 GTAAATTCTAAGTTC-TGCCTCAAATGAGACAAACATGGATTCTAGTAGGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * *
40821 CATGATTAGGCACTATAAACACATTCTCCTCGTCAGGATGCATGATATTGATGGTTTTCTCTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
*
40886 ATGGAAAACTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* *
40951 TTGATTCTCATAACAA-TCTCCACTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
196 TTGATTCTCGTAA-AAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* * *
41015 GGATACATGACATTGGTG-TGTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCCTTATTGATAGA
260 GGATACATGACATTGATGCT-TTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* * *
41079 ATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATGCTAGTCCCTATTCTTTTC-AGGA
324 ATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-GA
* * * * * * *
41143 TCAGGCACCACAAACATAGCCTTCTTTTAAGGAAACATGATATTGATGCTTTGGTTTCGGAAGAT
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* *
41208 ATGCTTTCTTCCCTCCAATTTGT
453 ACGCTTTCTTCCCACCAATTTGT
* * *
41231 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTATTAAGGATCTTCACTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* *
41296 CATGATTAGGCACTATAAATACATTCTCCTCATCAGCATACATGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
*
41361 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGTGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * *
41426 TTGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAATCCTTTTATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* * *
41491 GATACATCACATTGATGCTTTGGTGTCGCAAGAGAAGCTGGTCTTTCCCCCGTTATTGATAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
41556 CAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATTA
326 CAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATTA
*
41621 GGCACCATAAACATAGTCTTCTTATACAGATACATGATATTGATGCTTTGGTTTCGCAAGATACG
391 GGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACG
*
41686 CTTTCTTCCCACCAATTTTT
456 CTTTCTTCCCACCAATTTGT
* *
41706 GTAAATTCTAAGTTCGTT-CCTCAAATGACACAAACATGGATTCTAGTAGGGATCTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * *
41770 TCGTGATTAGGGACTATAAACACATTCTCCTCGTCAGGATGCATGATATTGATGGTTTTCTTTTG
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
*
41835 CATGGAAAACTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* *
41900 ATTAATTCTCGTAACAA-TCTCCATTATTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
195 ATTGATTCTCGTAA-AAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
* * * * * *
41964 AGGATAAATGACATTGGTGCGTTGGTGTCGGAAGAAAAGCTTGTCTTTCCACCGGTATTGATAGA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* *
42029 ATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATGCTAATCCCCATTCTTTTCAAGAT
324 ATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGAT
* * * * *
42094 CAGGCACCACAAACATAGCCTTCTTTTAAGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
389 TAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
*
42159 CGCTTTCTTCCCACCAATTTTT
454 CGCTTTCTTCCCACCAATTTGT
* * *
42181 GTAAATTCTAAGTTCATGCCTCAAATGAGACAAACGTGGATTCTTGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* *
42246 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATGCATGAAATTGATGGTTTTCTTTTTG
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTC-TTTTG
* * * *
42311 CATCGAAATCTTTTCATTGCCTTATTTTCCATAAAATCAAAGTTTTCACTTTAAATGAGACACGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* * * * * *
42376 ATTGATTCTCATAACAGCCTCAATTCTTTTCAAGATTAGGATCCAAAAACACATTCCTCTCATTA
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* * * *
42441 GGATGCATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTATTTCCCCCGTTATTGGTAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
*
42506 TCAAAGTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCTTTTC-AGGAT
325 TCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-GAT
* * *
42570 TAGGCACCATAAACATAGTCTTCTTTTAAGGGTACATGATATTGATGCTTTGGTTTCGCAAGATA
389 TAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
* *
42635 CGTTTTTTTCCCACCAATTTGT
454 CGCTTTCTTCCCACCAATTTGT
42657 GTAAATTCTAAGTT-TGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
1 GTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * *
42721 CCGTGATTAGGCACTATAAACACATTCTCCTCATCAGGATGCATGATATTGATGGTTTTCTTTTG
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
*** **
42786 CACAAAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACACAC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* * * * * *
42851 ATTGATTCTCATAACAGCCTCCATTCTTTTCAAGATTAGGATCCAAAAACAAATTTCTTTCA-TA
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* * * * *
42915 CGGATGCATGACATTGATGCTTTGGTGTCGCAAGAGAAGGTTGTCTTACCCCCGTTACTGATAGA
260 -GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* ** * * * * *
42980 ATCAAAGTCGTCTCAAAAATAAGACAAACGTGAATACTCATGCTAATCCCCTTTCCTTTCTGGAT
324 ATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGAT
* ** * *
43045 TAGGCACCAGACGCATAGTCTTCTTATACGGATACATGATATGGATGCTTTGGTTTCACAAGATA
389 TAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
43110 CGCTTTCTTCCCACCAATTTGT
454 CGCTTTCTTCCCACCAATTTGT
* * * * * *
43132 GTAAAGTATGAGTTCATTG-CTCAAATAAGACAAACATGGATTCTTGTAGGGATCTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * * * * * *
43196 TCGTGATTAGGCATTATAAATACATTCTCCGCTTTAGGATAAATGATATTGATGGTTTTCTTTCG
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* * * * * * *
43261 CATGAAAATCATTTCTTTGCCTTATTTACCTTAAAATCATAGTTTGTACTTTAAATAAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* * * **
43326 ATTGATTCTCATAAAAGTCTCCATTCTTTGCAAGATTAGGATCCAAAAATGCATTCCTTTCATTA
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
43391 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* *
43456 TCAAAGTTGTCTCTTAAATAAGGCAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATT
325 TCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATT
* * * *
43521 AGGCACCCTAAACATAGTCTTCTTATACGGATACATGATTTTGATGCTTTGCTTTTC-TAAGATA
390 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTG-GTTTCGCAAGATA
*
43585 CGCTTTCTTCCCATCAATTTGT
454 CGCTTTCTTCCCACCAATTTGT
* *
43607 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCACTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * *
43672 CATGATTAGGCACTGTAAACATATTCTCCTGATCAGCATACATGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
** *
43737 ACAGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGTCATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * **
43802 TTGATTCTCGTAACAGTCTCTATTCTTTTCAAGATTAGGAACCAAAAACACATTTATTTCATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* *
43867 GATACATCACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCCCCGTTATTGATAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
* *
43932 CAAAGTTGTCTCTTAAATAAAACAAACATGAATACTCATACTAATCCCCATTCTTTTCTGGATTA
326 CAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATTA
* * * * * *
43997 GGCACCATAAACATAGTCTTCTCATATGGATACATGACATTAACGCTTTAGTTTCGCAAGATACG
391 GGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACG
44062 CTTTCTTCCCACCAATTTGT
456 CTTTCTTCCCACCAATTTGT
* * * * * * *
44082 GGAAA-GCATGAGTTCATTG-CTCAAATGAGACAAAGATGGATTCTTGTAGGGATCTTCTTTCAT
1 GTAAATTC-TAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCAT
* * * * * * *
44145 TTCTTGATTAGGCATTATAAACACATTCTCCGCTTTAGGATAAATGATATTCATGGTTTTCTTTT
64 TTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTT
* * * * *
44210 GCATGAAAATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAGTGAGACATG
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
*
44275 C----A---T--T----G-----ATTC---TC--G--T---AACCAAAAACACATTCCCTTCATT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
* * * * *
44312 AGGATACATGACATTGATGCTTTGTTGTCACAAGAGAAGCTTTTCTTTCCAACGTTATTGATAAA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* * * * * * *
44377 ATCAAAGTTTGCCTCTTAAATAAGGCAAACTTGAATACTCATGCTAATCCCCATACCTTTCAAGA
324 ATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
* * * *** **
44442 ATAGGCACCGTAAACATAGTCTTCCTATACGGA-ATCA--A-AGTTG-T-CTCTTAAATAAGAAA
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATA-CATGATA-TTGATGCT-TTGGTTTCG---
* * * *
44501 AACCTAA-ATACTCATACTAATCGCCATTCTTTTCAGGATTAG-
447 ---C-AAGATACGCTTTCT--TC-CCA--C----CA--ATTTGT
* ** * ** * * * * * *
44543 GCACCATAAAC-ATAG-TC-TACCTTTAATGATACATGATATTGACGCTT-TGGTTTCACAAGAT
1 GTA--A-ATTCTA-AGTTCTTGCCTCAAATGAGACA-AACA-TG--GATTCTAG--T-A-AGGAT
* * ** ** ** * * * *
44604 AC-GCTTTCATCACACCAATTTTTG---TA-AATTCTA-AGTTCTGCCTCA-AATGAGACA--A-
54 -CTTCATTCATTTCA-TGA-TTAGGCACTATAA-AC-ACA-TTCT-CCTCATCAGGATACATGAT
* * * * * * * *** *
44659 ACT--TGG-ATTC--TAGTA-GG-GATCTTCATTCATTT-CATGATTAGGCACTATAAA-CACA-
112 ATTGATGGTTTTCTTTTGCATGGAAATCTT--TTC-TTTGCCTTATTTTCCA-TA-AAATCAAAG
* * * * * * * * * *
44714 TTCTCCTCGTCAGGATGCATGATATTG-ATGGTTTTCTCTTGCATGGAAAA--CT--TTTCTTTG
172 TT-TGCACTTTA-AATG-A-GACA-TGCATTG-ATTCTC--G--T--AAAAGTCTCCATTCTTTT
* **** * * * * * * *
44774 C---CTTATTTTCCGTAAAATCAAAGT--TTGCACTT----TAAATGAGGCATT--T--ATTGAT
225 CAAGATTAGGAACC--AAAAACACATTCCTTTCA-TTAGGATACATGA--CATTGATGCTTTG-G
* * * *** * * * * * * * * * * *
44826 TCTCGTAAAAGTCTCCAT-TCTTTTCA-AGATTA-GGAACCAAAAACACA-TTCCTTTCATTAGG
284 TGTCGCAAGAG-AAGCTTGTCTTTCCACCG-TTATTG-A-TAGAATCAAAGTT-GTCTC-TTA-A
*** ** ** ** * * **** * *
44887 ATACATGACATTGATGCCTTTGTGTTGCAAAAGAAGCATGTC-TTTCCACCG-TTATTG-ACCGA
342 ATA-A-GACAAACATG-AATACTCATAC-TAATCCCCAT-TCTTTTCTA--GATTA-GGCACC--
* * *** * * * * ** * * * * *
44949 ATCAAA-GTTGTC-TCTTA-AATAAGACA--AAAATGAATAC--T--CAT-ACTA-ATCCCCATT
397 AT-AAACATAGTCTTCTTATACGGATACATGATATTG-ATGCTTTGGTTTCGCAAGATACGCTTT
* * * *
45003 CTGTTCTA--GATTAG-
460 CT-TCCCACCAATTTGT
* * * * * * * ** **
45017 GCACAATAAAC-ATAG-TCTT--CTTATACG-GATACAAGAT-G-TTGAAGCTTTGG-T-TTCGC
1 GTA-AAT--TCTA-AGTTCTTGCCTCAAATGAGACA-AACATGGATTCTAG-TAAGGATCTT--C
* ** * * * * ** * * * *
45073 ATGATACGCTTTCGCCCCACCAATTTGTGTAATTTCTA-A-GTTCGTGCCTCA-AATGAGACA--
58 AT--T-C-ATTT-----CA-TGATTAG-GCACTATAAACACATTC-T-CCTCATCAGGATACATG
* * * * * * **
45133 A-A--CATGG-ATTC--TAGTATGG--ATCTTCATTCATTT-CATGATTAGGCCCCAT-AAA-CA
110 ATATTGATGGTTTTCTTTTGCATGGAAATCTT--TTC-TTTGCCTTATT---TTCCATAAAATCA
* * * * * * * * * * **** *** * *
45187 CA-TTCTCCTCATCAGGATGCATGATATTG-A-TGGTTTTCTTTTGCGT-GGAAATCTTTTCATT
169 AAGTT-TGCACTTTA-AATG-A-GACA-TGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA-A
* **** * * * * * * **
45248 GCCTTATTTTCCTTAAAATCAAAGTT--TGTACTTTAAGTGAGACATG-CATTGATTCACGTAAA
228 G-ATTAGGAACC--AAAAACACA-TTCCT-TTCATT-AG-GATACATGACATTGA-T-GC-T-TT
* * **** * * *** * * * *
45310 AGTCTC-CATTCCTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAGGATA-CATGACA-
282 GGTGTCGCA----AGAGAAGCTT--G--TC--TTTC-CA--CCGTT-ATT--GATAGAATCAAAG
** * * * * ** * ** **
45372 TTGATGCT-TT-GGT--GTCGCAAGA-GAA-GCTTGTA-T-TTCCACCA-TGATTGATAGAATCA
331 TTG-T-CTCTTAAATAAGAC-AAACATGAATACTCATACTAATCC-CCATTCTTTTCTAG-AT--
* * * * ** *
45428 AAGTTTGC-CTCTTAAATA-AG-C--C--AAACAGGAATACTCAT-ACTAATCCCCATTCTTTTC
389 TAG---GCAC-CATAAACATAGTCTTCTTATAC-GG-ATA--CATGA-T-AT--TGATGC--TT-
* ** ** ** * * ** ***
45485 TAGATTAGGCACCATAAACATAGTCTTCCTATACGGATACAT
439 T-GGTTTCGCAAGATACGC-T-TTCTTCC--CACCAATTTGT
* * * ** * * *** *** * *
45527 G-ATATT-GATGCTT-TGGTTTCGCAAGAT-ACGCTTTCTTCCCACCAATTTTTGTAA--ATTCT
1 GTAAATTCTAAG-TTCT--TGCCTCAA-ATGA-G---AC-AAACATGGATTCTAGTAAGGA-TCT
* * * * * ** * * * *
45586 AT-GTTCATGCCTCA-AATGAGACACTCATGGATTCTAGTATGGATCTTCATTCATTTTATGATT
56 -TCATTCAT--TTCATGATTAGGCACT-AT--AAAC-A-CAT---TC-TC-CTCA--TCAGGA-T
*** ** * ** * * * ** * ** * *
45649 AGGCACT-ATAAACA-CATTCTACTCAT-CA-GGATGCATGATATTGATGGTTTTCTTTTGCATG
105 A--CA-TGATATTGATGGTT-TTCTTTTGCATGGA--AAT-CTTTTCTTTGCCTTATTTTCCAT-
* **** *** * * * * * * *
45710 GAAATCTTTTCTTTGC-CTTATTTTCCTTA-AAAT-CAAAGTTTATGCT-TTAAATTAGACATGC
162 AAAATC-AAAGTTTGCAC---TTTAAATGAGACATGC--A-TTGATTCTCGTAAA--AGTC-TCC
** * ** *** **** *
45771 ATT-GATTCACATAAAAGTCTCCATTCTTTTC-CAGATCAGGAGCCAAAAACACATTCCTTTCAT
217 ATTCTTTTCA-AGATTAGGAACCA---AAAACACA-TTC-------------------CTTTCAT
* *
45834 TAGGATGCATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTGATTGATAG
258 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAG
* * * *
45899 AATCAAAGTTTGCCTCTTAAATAAGCCAAACAGGAATAATCATACTAATCCCCATTCTTTTCTAG
323 AATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAG
* **
45964 ATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTCGGTTTCATAAGA
387 ATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGA
46029 TACGCTTT-TGTCCCACCAATTTGT
452 TACGCTTTCT-TCCCACCAATTTGT
* * * * *
46053 GTAAATTCTAAGTTCGTGCCTTAAATGAGATAAACAAGGATTCTAGTATGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * * *
46118 CTTGACTAGGCACCATAAACACAATCTCCGCATCAGGATGCATGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
46183 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * *
46248 TTGATTCTCGTAAAAGACTCCATTCCTTTCAAGATTAAGAACAAAAAACACATTCCTTTCATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* * * *
46313 TATACATAACATTGATGCTTTGGTGTTGCAAGAGAATCTTGTCTTTCCACCGTTATTGATAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
* * *
46378 CAAAGTTGTCTCTTAAATAAGACAAACAAGAATACTCAGACTAATCCCCATTTTTTTCT-GTATT
326 CAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAG-ATT
* * * * *
46442 AGGCACTATAAACATAGTCTGCTTATACGGGTACATGATATTGATGCTTTGGTTTCGAAAGATAT
390 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATAC
*
46507 GCTTTTTTCCCACCAATTTGT
455 GCTTTCTTCCCACCAATTTGT
* * * *
46528 GTAAA-GCATGAGTTCATTG-CTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCAT
1 GTAAATTC-TAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCAT
* * * * * * * *
46591 TTCGTGATTAGGCTCTACAAACACATTCTCCGCTTTAGGATAAATGATATTGATGGTTTTTTTTT
64 TTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGG---TTTTCT
* * * * *
46656 TTTGCATGAAAATCTTTTGTTTGCCTTATTTTTCC-TAAAATCAAAGTTTGTATTTTAAATGATA
126 TTTGCATGGAAATCTTTTCTTTGCCTTA-TTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGA
* * *
46720 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA-TGGCGAACGAAAAACATATTTCC-
190 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACA-TTCCT
* * * * *
46783 TTCATTAGGATACATGACAATGATGCTTTGCTGTCGCAAGAGAACCTT-TACTTTCCAACGTCAT
253 TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGT-CTTTCCACCGTTAT
* * * ** * * *
46847 TGATAAAATCAAAATCTGCCTCTTAAATAA-AGCAAATTTGAATACCCATACTAATCCCTATTCC
317 TGATAGAATCAAAGT-TGTCTCTTAAATAAGA-CAAACATGAATACTCATACTAATCCCCATTCT
* * * *
46911 TTTCAAGATTAGGCACTATAAACATAGTCTTCTTATACGGATACAGGATATT-AGTGATTTGGTT
380 TTTCTAGATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGA-TGCTTTGGTT
* * * *
46975 TCGTAAGAAACGCTTT-TTCCCATCAATTTTT
444 TCGCAAGATACGCTTTCTTCCCACCAATTTGT
* * *
47006 TTAAATTCTAAGTT-TGTGCCACAAATGAGAGAAACATGGATTCTAGTAAGGATCTTC-TTGCAT
1 GTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT-CAT
* * * * *
47069 TTCATGATTTGGCACCATAAACACATTCTCCTCATTAGGAAAAATGATATTGATGGTTTTCTTTT
64 TTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTT
* *
47134 GCATGAAAATCTTTTCTTTGCCTTATTTTCCGTAAAATCAAAGTTTGCACTTTAAATGAGACATG
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
*
47199 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAAGAACCAAAAACACATTCCTTTCATT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
* * **
47264 AGGATACATGACATTGATGCCTTGGTGTTGCAAGAGAAGCTTGTCTTTCCACCGTTATTGACCGA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
**
47329 ATCAAAGTTGTCTCTTAAATAAGACCAAA-ATGAATACTCATACTAATCCCCATTCTACTCTAGA
324 ATCAAAGTTGTCTCTTAAATAAGA-CAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
* * *
47393 TTAGGCACAATAAACATAGTCTTCTTATACGGATACATGATGTTGAAGCTTTGGTTTCGCAAGAT
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
*
47458 ACGCTTTCGTCCCACCAATTTGT
453 ACGCTTTCTTCCCACCAATTTGT
* *
47481 GTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTATGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* *
47546 CATGATTAGGCACCATAAACACATTCTCCTCATCAGGATGCATGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* **
47611 ATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTGCTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * *
47676 TTGATTCACATAAAAGTCTCCATTCTTTTCCAGATTAGGAGCCAAAAACACATTCCTTTCATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* *
47741 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTGATTGGTAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
* * * * *
47806 CAAAGTTTGCCTCTTAAATAAGCCAAACAGGAATACTTATAGTAATCCCCATTCTTTTCTAGATT
326 CAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATT
* *
47871 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATAATGATGCTTTGGCTTT-GGAAGATA
390 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGG-TTTCGCAAGATA
*
47935 CGCTTT-TGTCCCACTAATTTGT
454 CGCTTTCT-TCCCACCAATTTGT
* ** * * * *
47957 GTTAATTCTAAGTTAATGCCTTAAATGAGATAAACAAGGATTCTAGTATGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * * * * *
48022 CTTGACTAGGCACCATAAACACAATCTCCGCAACAGGATGCATGATATTGATGGTTTTGTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
48087 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * *
48152 TTGATTCTCGTAAAAGAT-TCCATTCCTTTCAAGGTTAGGAACAAAAAACACATTCCTTTCATTA
196 TTGATTCTCGTAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* * *
48216 GTATACATGACCTTGATGCTTTGGTGTCGCAAGAGAAGCTTGTGTTTCCACCGTTATTGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* *
48281 TCAAAGTTGTCTCTTAAATAAGACAAACAAGAATACTCATACTAATCCCCATTCTTTTCTGGATT
325 TCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATT
* * * * * * *
48346 AGGCACCATAAACATAGTCTTCTCAAATGGATACATGACATTAACGCTTTGGTTTCACAAGATAC
390 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATAC
48411 GCTTTCTTCCCACCAATTTGT
455 GCTTTCTTCCCACCAATTTGT
* * * * * * *
48432 GGAAAGTATGAGTTCATTG-CTCAAATGAGACAAAGATGGATTCTTGTAGGGATCTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * * * * *
48496 TCATGATTAGGCACTATAAAGACATTCTCCGCTTTAGGATAAATGATATTCATGGTTTTCTTTTA
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* * *
48561 CATGGAAATCTTTTCTTAGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* * *
48626 ATTGATTCTCGTAAGAGTCGCCATTCTTTTCAAGATT-GTGAACCAAAAACACATTCCCTTCATT
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACATTCCTTTCATT
* * * * *
48690 AGGATACATGACATTGATGCTTTGTTGTCACAAGAGAAGCTTTTCTTTCCAACGTTATTGATAAA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* * * * * * *
48755 ATCAAAGTTTGCCTCTTAAATAAGGCAAACTTGAATACTCATGCTAATCCCCATACCTTTCAAGA
324 ATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
* * * * * * *
48820 ATAGGCACCGTAAACATAGTCTTCCTATACGGATGCAGGATATTGATGATTTGGTTTCGCAAGAA
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* ** *
48885 ATGCTTT-TTCCCCATTAATTTTT
453 ACGCTTTCTT-CCCACCAATTTGT
* * *
48908 GTAAATTCTAAGTTCGTGCCTCAAATGAGGCAAACATGGATTCTAGTAAGGATCTTCGTTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
*
48973 CATGATTAGGCACTATAAACACATTCTCCTCATTC-GGATAAATGATATTGATGGTTTT-TTTTG
66 CATGATTAGGCACTATAAACACATTCTCCTCA-TCAGGATACATGATATTGATGGTTTTCTTTTG
* *
49036 CATGGAAATCTTTTGTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTGAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* *
49101 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACGTTCCTTTCATTT
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* * * * *
49166 GGATACATGACATTGATGCGTTGGGGTCACAAGAGAAGCTTGTC--T--ACAGATATTGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* * *
49227 TCAAAGTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCTATTCTTTTCTGGATT
325 TCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATT
*
49292 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATAT
390 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATAC
* *
49357 GCTTTCGTCCCACCAATCTGT
455 GCTTTCTTCCCACCAATTTGT
* ** * * *
49378 GTAAATTCTATGTTCGGGCCTCAAATGAGACAAACATGGGTACTAGTATGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * *
49443 CATGATTAGGCACTATAAACACATTCTCCTCATCAAGATGCATGATATTGCTGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* *
49508 ATGGAAATCTTTTCTTTGCCTTATATTCCATAAAATCAAAGTTTGCACTTTGAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * *
49573 TTGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTTGGAA-CAAAAAGCACATTTCTTTCATTA
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAA-CACATTCCTTTCATTA
*
49637 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATAGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* *
49702 TCAAAGTTGTCTCTTAAATAAGACAAA-AGAGAATACTCATACTAATCCCCATTTTTTTCT-GTA
325 TCAAAGTTGTCTCTTAAATAAGACAAACA-TGAATACTCATACTAATCCCCATTCTTTTCTAG-A
* * * *
49765 TTAGGCACGATAAACATAGTCTTCTTATATGGGTACATGATATTGATGCTTTGGTTTCACAAGAT
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* *
49830 ATGCTTTTTTCCCACCAATTTGT
453 ACGCTTTCTTCCCACCAATTTGT
* * * * *
49853 GTAAAGTATGAGTTCGTTG-CTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * *
49917 TCGTGATTAGGCACTATAAACACATTCT-CTGCTTCAGGATAAATGATATTGATGGTTTTCTTTT
65 TCATGATTAGGCACTATAAACACATTCTCCT-CATCAGGATACATGATATTGATGGTTTTCTTTT
* * * *
49981 GCATAGAAATCTTTTTTTTTTTGCCTTATTTTCC-TGAAAATCAAAGTTTGTACTTTAAAGGAGA
129 GCATGGAAATC---TTTTCTTTGCCTTATTTTCCAT-AAAATCAAAGTTTGCACTTTAAATGAGA
* * *
50045 CATGCATTGATTCTCATAAAAGTGTCCATTCTTTTCAAGATT-GCGAACCAAAAACACATTCCCT
190 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACATTCCTT
* * * * * **
50109 TCATTAGGATACATGACATTGATACTTCGGTGTCGTAAGTGAAGCTTTTCTTTCCAAAGTTATTG
254 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTG
* *
50174 ATAAAATCAAAGTTTGCCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTT
319 ATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTT
* ** * ** * *
50239 CTAGATTAGGCACCATAATCATAGTCTTCCCACACGGATACATGGCATTAATGCTTTGCTTTCGC
383 CTAGATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGC
50304 AAGATACGCTTTCTTCCCACCAATTTGT
448 AAGATACGCTTTCTTCCCACCAATTTGT
* * * * * *
50332 GTAAAGTATGAGTTCATTG-CTCAAATGAGACAAACATGGGTTCTTGTAGGGATCTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * * * *
50396 TCGTGATTAGGCTCTATAAACACATTCTCCAT-TTTAGGATAAATGATATTGATGGTTTTTTTTT
65 TCATGATTAGGCACTATAAACACATTCTCC-TCATCAGGATACATGATATTGATGGTTTTCTTTT
* * * *
50460 GCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGATACATG
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
* * * *
50525 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA-TGGCGAACAAAAAACATATTCCCTTCAT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACATTCCTTTCAT
* * * * * * *
50589 TAGGATACATGACAATGATGCTTTGCTGTCGCAAGAGAACCTTTTCTTTCCAACGTCATTGATAA
258 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAG
* ** * *
50654 AATCAAAGTCTGCCTCTTAAATAAAGA-AAATTTGAATACTTATACTAATCCCCATTCCTTTC-A
323 AATCAAAGT-TGTCTCTTAAAT-AAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA
** * * * * *
50717 GGATTAGGCACTGTAAACATAGTATTCTTATACGGATACAGGATATTGGTGATTTGGTTTCGTAA
386 -GATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAA
* *
50782 GAAACGCTTT-TTCCCATCAATTT-T
450 GATACGCTTTCTTCCCACCAATTTGT
* * *
50806 TTAAAATTCTAAGTT-TGTGCCTCAAATGAGAGAAATATGGATTCTAGTAAGGATCTTCATTCAT
1 GT-AAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCAT
* * *
50870 TTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAAAGATATTGATGGTTTTCTTTT
64 TTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTT
* *
50935 GCATGGAAATCTTTTCTTTGCCTTATTTTCCGTAAAATCAAAGTTTGCACTTTAAATGAGACAGG
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
*
51000 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCTTTTCATT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
* * *
51065 AGGATACAAGACATTGATGCTTTGGTGTCACAAGAGAAGCTTGTCTTTCCACCGTGATTGATAGA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* * * *
51130 ATCAAAGTTTGCCTCTTAAATAAGCCAAACGTGGATACTCATACTAATCCCCATTCTTTTCTAGA
324 ATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
*
51195 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCATGAT
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
51260 ACGCTTT-TGTCCCACCAATTTGT
453 ACGCTTTCT-TCCCACCAATTTGT
* * * * * *
51283 GTAAATTCTAAGTTCGTGCCTCAAATGAGTCAAACAAGGATTCTAGTATGGATCGTCATTCTTTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * *
51348 C-TCAACTAGGCACTAT-AACACAATCTCCTCATCAGGATGCATGATATTGATGGTCTTCTTTTG
66 CAT-GATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* * * *
51411 CATTGAAATCTTTTCATTGCCTTATTTTCCATAAATTCAAAGTTTGCACTTTGAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* *
51476 ATTGATTCTCATAAAAGTGTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
*
51541 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTGATTGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* * * * * *
51606 TCAAAGTTGCCACTTAAATAAGACAAACAGGAATACTCATACTAATCCCCATTCTTTCCTGGTTT
325 TCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATT
* *
51671 AGGCACCATAAATC-TAGTCTTCTTATACAGATACATGATATTGATGTTTTGGTTTCGCAAGATA
390 AGGCACCATAAA-CATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
* * * *
51735 TGTTTTCGTCCCACCAGTTTGT
454 CGCTTTCTTCCCACCAATTTGT
* * * * *
51757 GTAAATTATAAGTCCGTGCCTCAAATGAGACAAACATGGATTCTAGTATGGATCTTTATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * *
51822 CATGATTAGGAACTATAAACACATTCTCCTCATCAGGATGCATGATGTTGATGGTCTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* *
51887 ATGGAAATCTTTTCTTTTCCTTATTTTCCATAAAATCAAAGTTTGCTCTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * * * *
51952 TTGATTCTTGAAAAAGTCTCCATTCTTTTCAAGATT-GCAAACCACAAACACATTCCCTTCCTTA
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACATTCCTTTCATTA
* * * * * *
52016 GGATACATGATATTGATGCTTTGTTGTCGCGAGAGAAGCTTTTCTTTCCAACGTTATTGATAAAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* ** * * * *
52081 TCAAAGTTTGCCTCTTAAATAAGGTAAACTTGAATACTCATACAAATCCCTATTCCTTTC-AGGA
325 TCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-GA
** * * *
52145 TTAGGCACTGTAAACATAGTCTTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAA
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* * * *
52210 ACGCTTTTTTCCTATCAATTTTT
453 ACGCTTTCTTCCCACCAATTTGT
* * *
52233 TTAAATTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * *
52298 CATGATTAGGCATTATAAACACGTTCTTCTCATTC-GGATAAATGATATTGATGATTTTCTTTTG
66 CATGATTAGGCACTATAAACACATTCTCCTCA-TCAGGATACATGATATTGATGGTTTTCTTTTG
*
52362 CATGGAAATCTTTTCATTGCCATT-TTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
130 CATGGAAATCTTTTCTTTGCC-TTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
*
52426 CATTGATTCTCGTTAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
* *
52491 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTATCTTTCCACCGTGATTGATAGA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* * * * *
52556 ATCGAAGTTGTCACTTAAATAAGACAAACAGGAATACTCATACTAATCCCCATTCTTTCCTTGAT
324 ATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGAT
* * * *
52621 TAGGCACCATAAACCTTGTCTTCTTATACAGATACATGATATTGATGTTTTGGTTTCGCAAGATA
389 TAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
* * *
52686 CGTTTTCGTCCCACCAGTTTGT
454 CGCTTTCTTCCCACCAATTTGT
* * * * *
52708 GTAAATTATAAGTCCGTT-ACTCAAATGAGACAAACATGGATTCTAGTATGGATTTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* *
52772 TCATGATTA-GCAACTATAAACACATTCTCCTCATCAGGATGCATGATGTTGATGGTTTTCTTTT
65 TCATGATTAGGC-ACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTT
*
52836 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCTCTTTAAATGAGACATG
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
*
52901 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATT-GCGAACCAAAAACACATTCCCTTCAT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACATTCCTTTCAT
* * * * *
52965 TAGGATACATGATATTGATGCTTTGTTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAA
258 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAG
* * * **
53030 AATCAAAGTTTGCCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCTTATTCTTTT-TAG
323 AATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-
* * * * *
53094 GATTAGGCACCGTAAACATAGTCTTCTTATACGGATACAGGGTATTGATGATTTAGTTTCGCAAG
386 GATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * *
53159 AAACGCTTTTTTCCTATCAATTTTT
451 ATACGCTTTCTTCCCACCAATTTGT
* * * * * * *** * *
53184 TTAAATTCTAAGTTCATTTCATTCAGATAAATGATATTGAT-GATTTTCTTTTGCATGAA-AATC
1 GTAAATTCTAAGTTC-TTGC-CTCAAAT-GA-GACAAACATGGA--TTC--TAG--T-AAGGATC
* *** * * * * * *
53247 TT--TTCATTGCCAT-ATTTTCCA-TA-AAATCAAAGTT-TGCACT-TTAAATGAGACATG-CAT
55 TTCATTCATT-TCATGATTAGGCACTATAAA-CACA-TTCT-C-CTCAT-CAGGATACATGATAT
* ** ** * ** * **** *
53304 TGA---TTCTCGTTAAAGTC-T-CCATTCTTTTC-AAG-ATTAGGAACCA-AAAA-CACA--TT-
114 TGATGGTTTTC-TT-TTG-CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTG
* * * * * * *** ** * *
53357 C-CTTTCATTAGGATACATGACTTTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTCCACCG-
176 CACTTT-A-AATGAGACATG-CATTGAT--TCT--CGT-A-AA-AGTCTCCATTCTTTTCA-AGA
* * * ** ** * * * * * *
53420 TTATAGATA-GAATCAA-AGTTGTCTCTTAAATAAGACAAACACGAATACTCATACTAATCCCTA
230 TTA-GGA-ACCAA-AAACACAT-TC-CTTTCATTAG-GATACATG---A--CAT--TGAT-GCT-
** * * * * * ** * * *
53483 TTTTTTTCTGGATTAGGCACCATAAACATAGTCTGCTTATA-CGAATACATGATATTG-AT--GA
280 TTGGTGTC-GCA--A-G----AGAAGC-TTGTCT--TTCCACCG-TTA-TTGATA--GAATCAAA
* * * *** * ** * * ** * **
53544 TTTGGTTTCGTAAGA-AACG-CTTTTTTCCAGTCAAT--TTGT-GTAAATTCTAAGTTCGTGCCT
330 GTT-GTCTCTTAA-ATAA-GAC----AAACA-TGAATACTCATACT-AATCCCCA-TTCTTTTCT
* * * * ** * * * *
53604 CAAATGAGAGAAACATGGATTCTAGTAAGGATCCTCATTCATTTCATGATTAGGCACT-ATAAAC
385 -AGATTAG-GCACCAT--AAAC-A-T-A-G-TCTTC-TT-A-TAC-GGA-TA--CA-TGAT--AT
** * * * * * **** *
53668 ACATTCTCCTCCTCAGG-AT-GCATGATATTGATGGTT-TTCTTTTGC-A-TCGAAAT
431 TGATGCT--T--T--GGTTTCGCAAGATA-CGCT--TTCTTC-CCACCAATTTG---T
* *** * ** *
53721 CTTTTCTTTGCCTTATTTTCCA-TAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTC
1 --GTAAATT--CT-A------AGT----TC-----TTGC-C-TCAAATGAGACAAACATGGATTC
* * * * * * * * * * * * *
53785 TCGTAA-TAGTCTCCAGTCTTTTCAAGATTAGGAACCAAAAACACATTC-CTTTGATTAAGATAC
44 TAGTAAGGA-TCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATAC
* * * ** * * * * * * *
53848 TTGACATTGATGCTTTGGTGTCGCA-AGAGAAGCTTTTCTTTCCACCGTTA--TT-GATAGAATC
107 ATGATATTGATGGTTTTCTTTTGCATGGA-AATCTTTTCTTT--GCC-TTATTTTCCATAAAATC
* * ** * * * * * * **
53909 AAAG-TTG-TCTCTTAAATAAGACAAACA-CGAATACTCATACTAA-TCCCCATTTTTTTCTGGA
168 AAAGTTTGCACT-TTAAATGAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGA
* * * * * * * *
53970 TTAGGCACCATAAACATAGT-CTGCTT-A-TACGGATACATGATATTGATGATTTGGTTTCGTAA
230 TTAGGAACCAAAAACACATTCCT--TTCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAA
* * * * * *
54032 GA-AACGCTT-T-TTTCCA--GTCAATTTGTGTA-AATTCTAAGTTCGTGC-CTCAAATGAGAGA
292 GAGAA-GCTTGTCTTTCCACCGT-TA-TTG-ATAGAA-TCAAAGTT-GT-CTCTTAAATAAGACA
* * *** ** * * * * *
54090 AACATGGATTCT-AGTAAGGATCTTCATTCATTTC-ATGATTAGGCACTATAAGCA-CGTTCTCC
350 AACATGAATACTCA-TACTAATCCCCATTCTTTTCTA-GATTAGGCACCATAAACATAG-TCTTC
* * * * * ** * * * * ** **
54152 TCATGA-GCATGCAGGATATTGATGGTTTTCTTTTGCATGGAAATC-TTTTCTTTGC-CTTATTT
412 TTAT-ACGGATACATGATATTGATGCTTTGGTTTCGCA-AGATA-CGCTTTCTTCCCACCAATTT
54214 -T
474 GT
* * ** * * ** * * * * *
54215 CCATAAAATCTAAG-TCTAAACTTTAAATGAGACATGCATTGATTCTCGTAA-AAGTCTCCACTC
1 --GTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATTC
* * * * * * * * * * ***
54278 TTTTCAAGATTAGGAACCAAAAACACATTC-CTTTCCTTAGGATACATGACATTGATGCTTTGGG
62 ATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTCT
* * * * * ** * *
54342 GTCGCA-AGAGAAGCTTTTCTTTCAACCGTTA---TAGATAGAATCAAAG-TTG-TCTCTTAAAT
126 TTTGCATGGA-AATCTTTTCTTT--GCC-TTATTTTCCATAAAATCAAAGTTTGCACT-TTAAAT
* * ** * * * * * * * * * * *
54401 AAGATAAACA-CGAATACTCATACTAA-TCCCCATTTTTTTCTAGATTAGGCACCATAAACATAG
186 GAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAT
* * * * * * *
54464 T-CTGCTT-A-TACGGATACAAGATATTGAAGCTTTGGTTTCGCAAGATACGCTT-TCTTCCCAC
249 TCCT--TTCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAC
* * * * * * * * * * ** ***
54525 CAATT-TGTG-CAGAGT-ATGAGTTCAT-TGCTCAAATGAGACAAACAGGGATTCTTGTAGGGAT
311 C-GTTAT-TGATAGAATCA-AAGTT-GTCT-CTTAAATAAGACAAACATGAATACTCATACTAAT
** * * * ** ** * *
54586 CTTCATTCATTTC-ATGATTAGCCACTATAAACCCATTCTCCGCTT-TA-GGATAAATGATATTC
371 CCCCATTCTTTTCTA-GATTAGGCACCATAAA--CATAGTCTTCTTATACGGATACATGATATTG
* * ** * * * * ** **
54648 ACGGTTTTCTTTTGCATGGAAATC-TTTTCTTAGC-CTTATTT-T
433 ATGCTTTGGTTTCGCA-AGATA-CGCTTTCTTCCCACCAATTTGT
* * * * * * ** * * * *
54690 CCTTAAAATCAAAGTT-TGTACTTTAAATGAGACATGCATTGATTCTCGTAA-AAGTCTCCATTC
1 --GTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATTC
* * * * * * * * * * * *
54753 TTTTCAAGATTAAGAACCAAAAACACATTCTCTTCATTAGGATACTTGACATTGAT-GCTTTGTT
62 ATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTT
* ** * * * * *
54817 GT-CACAAGAGAAGCTTTTCTTT-CC-AACGTTGTT-GATATAATCAATGTTTGC-CTCTTAAAT
127 TTGCA-TGGA-AATCTTTTCTTTGCCTTA--TT-TTCCATAAAATCAAAGTTTGCACT-TTAAAT
* * * * * * * **
54877 ---A-AGGCA---A-ACTTG-AATAG--T-CATAC---T--A-A-T-----CCCAATAGTC-TT-
186 GAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTC
** * * * * * * * * * ** ** ** *
54916 C-TT-ATACGGATACAAGATATTGATGATTTGGTTTCGTAAGAAACGCTTTTTTCCCATCAATTT
251 CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTA
* * *** ** * * * * * *** **
54979 GTGTAAATTCT-AAGTTCGTGC-CTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTCATT
316 TTG-ATAGAATCAAAGTTGT-CTCTTAAATAAGACAAACATGAATACTCA-TACTAATCCCCATT
* ** * * * * * *
55041 CATTTC-ATGATTAGGCACTTTAAACA-CGT-TATCCTA-ATCAGCATGCATGATGTTGATGGTT
378 CTTTTCTA-GATTAGGCACCATAAACATAGTCT-TCTTATA-C-GGATACATGATATTGATGCTT
** * * * * * ** * **
55102 TTCTTTTGCATGGAAATC-TTTTCCTTGCC-TTATTTTCC
439 TGGTTTCGCA-AGATA-CGCTTT-CTTCCCACCAATTTGT
* * * ** * * ** * * * *
55140 ATAAACTCAAAGTT-TAAACTTTAAATGAGACATGCATTGATTCTCGTAA-CAGTCTCCATT-AT
1 GTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATTCA-
* * * * * * * * * * * ** *
55202 TTTTAAGATTAGGAACCAAAAACACATAC-CTTTCATTAGCATACATGACATTGATGCTTTGGTG
63 TTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTCTT
* * * * * * * * * *
55266 TCGTA-AGAGAAGCTTGTCTTTCCACCGTTA--TT-GATAAAATCAAAG-TTG-TCTCTCAAATA
127 TTGCATGGA-AATCTTTTCTTT--GCC-TTATTTTCCATAAAATCAAAGTTTGCACT-TTAAATG
** * * * ** * * * *
55325 AGACAAACA-TGAATACTC--AAACTAATCCCCATTCTTTTCTTGATTAGGCACCATAAACATAG
187 AGACATGCATTG-ATTCTCGTAAA--AGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAT
* * * * * * * * * * *
55387 T-CTTCTTATAAAGATATATGATATTGATGCTTTAGTTTCGCAAGATACGCTT-TCTTCCCACTA
249 TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAC-C
* * * * * * * * * ** *** **
55450 ATTTTTG-TA-AATTCTAAGTTCGTAC-CTCAAATGAGACAAGCTTGGATTCTGGTAAGGATCTT
312 GTTATTGATAGAA-TCAAAGTT-GT-CTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
* * * * * * *
55512 CATTCATTTC-ATGATTTGGCACTATAAACA-CGTTCTCCTCAT-CAGGATGCATGATATTGATG
374 CATTCTTTTCTA-GATTAGGCACCATAAACATAG-TCTTCTTATAC-GGATACATGATATTGATG
* ** * * * * ** **
55574 GTTTTCTTTTGCATGGAAATC-TTTTCTTTGC-CTTATTT-T
436 CTTTGGTTTCGCA-AGATA-CGCTTTCTTCCCACCAATTTGT
* * ** ** * * ** * * * * *
55613 CCATAAAATGAAAGTT-TAAACTTTAAATGAGACATGCATTGATTCTCGTAA-AAGTGTCCATTC
1 --GTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATTC
* * * * * * * * * * **
55676 TTTTCAAGATTAGGAACCAAAAACACATTC-CTTTCATTAGGATACATGACATCGATGCTTTGGT
62 ATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTCT
* * * * *** * ** * * *
55740 GTCGCA-AGAGAAGCTTTTCTTT-CCACCGTTATAGATAGAATCAAAG-TTG-TCTCTTAAATAA
126 TTTGCATGGA-AATCTTTTCTTTGCC-TTATTTTCCATAAAATCAAAGTTTGCACT-TTAAATGA
** * * * * * * * * *** *
55801 GACAAACA-GGAATACTCATACTAA-TCCCCATT-TTTTCTAGATTAGGCACCATAAATGTA-GC
188 GACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTC
* * * * * * * *
55862 CTACTT-A-TATGGATACAAGATATTGAAGCTTTGGTTTCCCAAGATATGCTT-TCTTCCCACCA
251 CT--TTCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACC-
* * * * * * * * * * ** *** *
55924 ATT-TGTG-CAGAGT-ATGAGTTCAT-TGCTCAAATGAGACAAACAGGGATTCTTGTAGGGATCT
312 GTTAT-TGATAGAATCA-AAGTT-GTCT-CTTAAATAAGACAAACATGAATACTCATACTAATCC
* * * * * * * *
55985 TCATTCATTTCGT-GATTAGGCACTATAAACACATTCTCCGCTT-TA-GGATAGATGATATTCAT
373 CCATTCTTTTC-TAGATTAGGCACCATAAACATAGTCT--TCTTATACGGATACATGATATTGAT
* ** * * ** * *
56047 GGTTTTCTTTTGCATGGA-AATC-TT-TTCCTAGCCTTATTT-T
435 GCTTTGGTTTCGCA-AGATACGCTTTCTTCCCA-CC-AATTTGT
* * * * * * *** * * *
56087 CCTTAAAATCAAAGTT-TGTACTTTAAATGAGACTTGCATTGATTCTCA-TAA-AAGTCTCCATT
1 --GTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCT-AGTAAGGA-TCTTCATT
* * * * * * * * * *
56149 CTTTTCAAGATTACGAACCAAAAACACATTC-CCTTCATTAAGATACATGACATTGATGCTTTGT
61 CATTTCATGATTAGGCACTATAAACACATTCTCC-TCATCAGGATACATGATATTGATGGTTT-T
* * * * * *
56213 -TGTCGCA-AGAGAAGCTTTTCTTT-CC-AACGTTATT-CATAAAATCACAGTTTGC-CTCTTAA
124 CTTTTGCATGGA-AATCTTTTCTTTGCCTTA--TT-TTCCATAAAATCAAAGTTTGCACT-TTAA
* * ** ** * ** * * * * * **
56272 ATAAGGCAAAC-TTGAAAACTCATGCTAA-TCCCCATTCCTTTCAGGATTATGCACCGTAAACAC
184 ATGAGACATGCATTG-ATTCTCGT-AAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC
* * * * * * * * * *
56335 AGT-C-TTCTAATACGAATACAGGATATTGAAGGTTTGGTTTTGCAAGA-AACGGTT-T-TTTCT
247 ATTCCTTTC-ATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA-GCTTGTCTTTC-
* ** * * * * * * **
56395 TATCAATTTTTG-TA-AATTCTAAGTTCGTGC-CTCAAATGAGACAAACATGCATGCT-AGTAAG
308 CA-CCGTTATTGATAGAA-TCAAAGTT-GT-CTCTTAAATAAGACAAACATGAATACTCA-TACT
* ** * * * * * * *
56456 GATCTTCATTCATTTC-ATGATTAGGCACTATAAACACATTCTCCTCGAT-CGGATAAATGATAT
368 AATCCCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCT-TATACGGATACATGATAT
* * ** * * * * * ** * *
56519 TGAAGATTTTCTTTTGCATGGAAATC-TTTTCTTTGCC-TTATTTTCT
431 TGATGCTTTGGTTTCGCA-AGATA-CGCTTTC-TTCCCACCAATTTGT
* * * * * ** * * * *
56565 ATAAAATCAAAATT-TT-CACTTTAAATGAGACATGCATTGAGTCTCA-TAA-AAGTCTCCATTC
1 GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCT-AGTAAGGA-TCTTCATTC
* * * * * * * * * * * * ** *
56626 TTTTCAAGATTAGGAACCAAAAACACATAC-CTTTATTAGCATACATGACATTGATGCTTTGGTG
62 ATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTT
* * * * * * * * * *
56690 TCGCA-AGAGAAGCTTGTCTTTCCACCGTTA--TT-GATAGAATCAAAG-TT-CTC-TTAAGTAA
127 TTGCATGGA-AATCTTTTCTTT--GCC-TTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGA
** * * * * * * * *
56748 GACAAACA-TGAATACTCATACTAA-TCCCCATTCTTTTCTAGATTAGGCACCATAAACATAGTC
188 GACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACA-T-
* * * * * * * * * **
56811 TCC-TT-ATAAAGATATATGATATTGATGCTTTAGTTTCGCAAGATACGCTT-TCTTCCCACTAA
249 TCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAC-CG
* * ** * * * * * *
56873 TTTTTGA-A-AATTATAAGTTCGTAC-CTCGAATGAGACAAACATGGATTCTGGA-A-AAGATCT
313 TTATTGATAGAATCA-AAGTT-GT-CTCTTAAATAAGACAAACATGAATACT-CATACTA-ATCC
* * * * ** * * * * * *
56933 TCATTCATTTC-AGGATTTGGCACTATAAACGCATTCTCCTCATAAGGATGCATGATATTGATGG
373 CCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGC
** * * * * ** **
56997 TTTTCTTTTGCATGGAAATC-TTTTCTTTGC-CTTATTT-T
437 TTTGGTTTCGCA-AGATA-CGCTTTCTTCCCACCAATTTGT
* * * ** * * * *
57035 CCGTAAAATCAAAG-T-TTGCACTTTAAATGAGACAGGCATTGATTCTCGTAA-AAGTCTCCATT
1 --GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATT
* * * * * * * * * * **
57097 CTTTTCAAGATTAGGAACCAAAAACACATTC-CTTTCATTAGGATACATTACATTGATGCTTTGG
61 CATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTC
* * * * * * * * * * *
57161 TGTCGCAAGAAAAGCTTGTCTTTCCACCGTTA--TT-GATAGAATCAAAG-CTG-TCTCTTAAAT
125 TTTTGCATGGAAATCTTTTCTTT--GCC-TTATTTTCCATAAAATCAAAGTTTGCACT-TTAAAT
* ** * * * * * ** * *
57221 AAGACAAACA-GGAATACTCATACTAA-TCCCCATTCTTTTCTGGATTAGGCACCATAAAC-CTA
186 GAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC-A
* * * * * * * * * * *
57283 GT-C-TTCTTATACGGATACATGATATTGATGCTTCGGTTTCGTAAGATACGGTT-TCGTCCCAC
248 TTCCTTTCAT-TA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAC
* * ** * * * * * *
57345 CACTT-TGTGCA-A-ATTTTAAGTCCGTGC-CTCAAATGAGACAAACATGGATTCT-AGTA-TGG
311 C-GTTAT-TG-ATAGAATCAAAGT-TGT-CTCTTAAATAAGACAAACATGAATACTCA-TACT-A
** * * * * * *
57404 ATCTTCATTCATTTC-ATGATTAGGCACTATAAACACATTC-TCTTCAT-CAGCATGCATGATAT
369 ATCCCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTT-ATAC-GGATACATGATAT
* ** * * * * **
57466 TGATGGTTTTCTTTTGCATAGAAATC-TTTTCTT--TACCTTAATTTCC
431 TGATGCTTTGGTTTCGCA-AGATA-CGCTTTCTTCCCACC--AATTTGT
* * * * ** * * * *
57512 ATAAAAAT-AAAG-T-TTGCACTTTAAATGAGACATGCATTGACTCTAGTAA-TAGTCTCCATTC
1 GT-AAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATTC
* * * * * * ** * * * ** *
57573 TTTTCAAGAATAGGAACAAAAAACACATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTG
62 ATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTT
* * * * ** * * * * *
57638 TCGCA-AGAGAAGCTTGTCTTT-CCACCATTATT-GATAGAATCAAAG-CTG-TCTCTTAAATAA
127 TTGCATGGA-AATCTTTTCTTTGCC-TTATT-TTCCATAAAATCAAAGTTTGCACT-TTAAATGA
** * * * * * * * ** * *
57698 GACAAACA-GGAATACTCATACTAA-TCCCCATTCTTTTCTAGATTAGGCACCCTAAACATAGT-
188 GACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTC
* * * * * * * * *
57760 CTTCTTATTCA-GATACATGATATTGAAGCTTTGGTTTCGTAAGATACGCTT-TCTTCCCACCAA
251 CTT-TCATT-AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACC-G
* * * * * *
57823 TT-TGTG-TA-AATTCTAAGTTCGTGC-CTCAAATGAGACAAACATGGATTCT-AGTA-TGGATC
313 TTAT-TGATAGAA-TCAAAGTT-GT-CTCTTAAATAAGACAAACATGAATACTCA-TACT-AATC
** * * * * * * * *
57882 TTCATTCATTTC-ATGATTACGCACTATAAACACAATCTCCTCAT-CAGGATGCATGATATTGAT
372 CCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTTATAC-GGATACATGATATTGAT
* ** * * * * ** **
57945 GGTTTTCTTTTGCATGGAAATC-TTTTCTTTGC-CTTATTT-T
435 GCTTTGGTTTCGCA-AGATA-CGCTTTCTTCCCACCAATTTGT
* * ** * ** * * * *
57985 CCATAAAATGAAAG-T-TTGCACTTTAAATGAGACATGCATTGATTCTCGTAA-TAGTCTCCATT
1 --GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATT
* * * * * * * * * * * **
58047 CTTTTCAAGATTAGGAACCAAAAACACATTC-CTTTCATTAAGATACTTGACATTGATGCTTTGG
61 CATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTC
* * * * * * * * *
58111 TGTCGCA-AGAGAAGCTTGTCTTTCCACCGTTA--TT-GATAGAATCAAAG-TTG-TCTCTTAAA
125 TTTTGCATGGA-AATCTTTTCTTT--GCC-TTATTTTCCATAAAATCAAAGTTTGCACT-TTAAA
* ** * * * * * * * ** *
58170 TAAGACAAACA-GGAATACTCATACTAA-TCCCCATTCTTTTCTAGATTAGGCACCCTAAACATA
185 TGAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACA
* * * * * * * * *
58233 GT-CTTCTTATTCA-GATACATGATATTGAAGCTTTGGTTTCGTAAGATACGCTT-TCTTCCCAC
248 TTCCTT-TCATT-AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAC
* * * * * * *
58295 CAATT-TGTG-TA-AATTCTAAGTTCGTGC-CTCAAATGAGACAAACATGGATTCT-AGTA-TGG
311 C-GTTAT-TGATAGAA-TCAAAGTT-GT-CTCTTAAATAAGACAAACATGAATACTCA-TACT-A
** * * * * * * * *
58354 ATCTTCATTCATTTC-ATGATTAGGCACTATAAACACATTCTCCTCAT-CAGGATGCACGATATT
369 ATCCCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTTATAC-GGATACATGATATT
* ** * * * ** **
58417 GATGGTTTTCCTTT-GCATGGAAATC-TTTTCTTTGC-CTTATTT-T
432 GAT-GCTTTGGTTTCGCA-AGATA-CGCTTTCTTCCCACCAATTTGT
* * * * ** * * * * *
58460 CCATAAAATCAAAG-T-TTGCACTTTAAATGAGACATGCATTGATTGTCGTAA-AAGTCTCCATT
1 --GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATT
* * * * * * * * * * * * * **
58522 CTTTTCAAGATTAGGAACCAAAAACACATTC-CTTTTATTAGGATACAGGACAATGTTGCTTTGG
61 CATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTC
** * * * * * * * ** * *
58586 GGTCGCA-AGAGAAGCCTGTCTTTCCACCGTTA--TT-GATGGAATCGAAGTTTG-TCTCTTAAA
125 TTTTGCATGGA-AATCTTTTCTTT--GCC-TTATTTTCCATAAAATCAAAGTTTGCACT-TTAAA
* ** * * * * * * * **
58646 TAAGACAAACA-TGAATACTCATACTAA-TCCCCATTCTTTTCTAGATTAGGCACCATAAACTTA
185 TGAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACA
* * * * *
58709 GT-C-TTCTTATATGGATACATGATATTGATGCTTTGGTGTCGCAAGATACGCTT-TC-TTCTCA
248 TTCCTTTCAT-TA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTC-CA
* * * * * * * * *** ***
58770 CCAATT-TGTG-TA-AAGT-ATGAGTTCAT-TGCTCAAATGAGACAAACAGGGATTCTTGCAGGG
310 CC-GTTAT-TGATAGAA-TCA-AAGTT-GTCT-CTTAAATAAGACAAACATGAATACTCATACTA
** * * * * *
58830 ATCTTCATTCATTTCGT-GATTAGGCACTATAAACATATTCTCCGCTT-TA-GGATAAATGATAT
369 ATCCCCATTCTTTTC-TAGATTAGGCACCATAAACATAGTCT--TCTTATACGGATACATGATAT
* * ** * * ** * * *
58892 TCATGGTTTTCTTTTGCATGGA-AATC-TT-TTCCTATCAATTTTT
431 TGATGCTTTGGTTTCGCA-AGATACGCTTTCTTCCCACCAATTTGT
* * * * *
58935 GTAAATTCTAAGTTCATGCCTCAAATGAGGCAAACATGCATGCCAGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* *
59000 CATGATTAGGCACTATAAACACATTCTCCTCGATC-GGATAAATGATATTGATGATTTTCTTTTG
66 CATGATTAGGCACTATAAACACATTCTCCTC-ATCAGGATACATGATATTGATGGTTTTCTTTTG
* * *
59064 CATGGAAATCTTTTCTTTGCCCTATTTTCTATAAAATCAAAGTTTTCACTTTAAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* *
59129 ATTGATTCTCGTAAAAGTCTCCAATCTTTTCAAGATTAGGAACCAAAAACACA-TACTATTCATT
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCT-TTCATT
* * *
59193 AGCATACATGACATTGATGCTTTGGGGTTGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* * * * *
59258 ATCAAAGTTGTCTCTTAAATAAGACAAACAGGAATACTCATACTAATCCCTATTTTTTTCTGGAC
324 ATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGAT
** * * * *
59323 TAGGCACCATAAACATAGTCTTCTTATAAAGATATATGATATTGATGGTTTAGTTTCGCATGATA
389 TAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
* * *
59388 TGCTTTCTTCCCACTAATTTTT
454 CGCTTTCTTCCCACCAATTTGT
* * * * * * *
59410 GAAAATTCTAAGTTCGTACTTCAAATGAGACAAACAAGGATTCTGGTAAGGATCTTCATTTATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * *
59475 CATGATTTGGCACTATAAACACATTCTCCTCATAATGATGCATGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
*
59540 GTGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * ** *
59605 ATGATTCTCATAGCAGTCTCCATTCTTTTCAAGAATT-GGAACCAAAAACACATTTCTTTCATTA
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG-ATTAGGAACCAAAAACACATTCCTTTCATTA
* *
59669 GGATACATGACATTGATGCTTTGGGGTCGCAAGAGAAGCTTGTGTTTCCACCGTT-TATGATAGA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTAT-TGATAGA
* * * * *
59733 ATC-AAGTTGTCTCTTAAAAAAGACAAACAGGAATACCCATACTAGTCCCCATTCTTTTCTGGAT
324 ATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGAT
* * * * *
59797 TAGGCACCATAAACATTGACTTTTTATACGGATACATGATATTGAGGCTTTGGTTTCGGAAGATA
389 TAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
* *
59862 CACTTTCGTCCCACCAATTTGT
454 CGCTTTCTTCCCACCAATTTGT
* * ** * * *
59884 GTAAAATCTAAGTCCGCGCCTCAAATGAGACAAACAAGGATTCTAGTATGGATCTTCACTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* *
59949 CATGATTAGGCACTATAAACACATTCTCCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* *
60014 ATCGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGCGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
*
60079 TTGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* * *
60144 GATACATGACATTGATGCTTTGGGGTCGCAAGAGAAGCTTGTGTTTCCACCATTATTGATAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
* * * * *
60209 CAAAGTTGTCTTTTAAATCAGACAAACATGAATACTCTTACTAATCCCCATTCTTTTCTGGATTT
326 CAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATTA
* *
60274 GGCACCATAAACATAGTCTTTTTATATGGATACATGATATTGATGCTTTGGTTTCGCAAGATACG
391 GGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACG
*
60339 CTTTTTTCCCACCAATTTGT
456 CTTTCTTCCCACCAATTTGT
* ** * * * * *
60359 GTAAAATCTAAGTTCGCGCCTCAAAGGAGACAAACAAGGATTCTGGTATGGATCTTCAATCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* *
60424 CATGATTAGGCACTATAAACACATTCTCCTCCA-CAGGATGCAAGATATTGATGGTTTTCTTTTG
66 CATGATTAGGCACTATAAACACATTCTCCT-CATCAGGATACATGATATTGATGGTTTTCTTTTG
* ** * *
60488 CATCGAAAAATTTTCTTTGCCTTATTTTTCATAAAATCAAAGTTTGCATTTTAAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* *
60553 ATTGATTCTCGTAACAGTTTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* * *
60618 GGATACATGACATTGATGCTTTGGGGTCGCAAGAGAAGCTTGTGTTTCCACCATTATTGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* * * *
60683 TCAAAGTTGTCTTTTAAATCAGACAAACATGAATACTCTTACTAATCCCCATTCTTTTCTGGATT
325 TCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATT
* * *
60748 TGGCACCATAAACATAGTCTTTTTATATGGATACATGATATTGATGCTTTGGTTTCGCAAGATAC
390 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATAC
*
60813 GCTTTTTTCCCACCAATTTGT
455 GCTTTCTTCCCACCAATTTGT
* ** * * * * *
60834 GTAAAATCTAAGTTCGCGCCTCAAAGGAGACAAACAAGGATTCTGGTATGGATCTTCAATCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* *
60899 CATGATTAGGCACTATAAACACATTCTCCTCCA-CAGGATGCAAGATATTGATGGTTTTCTTTTG
66 CATGATTAGGCACTATAAACACATTCTCCT-CATCAGGATACATGATATTGATGGTTTTCTTTTG
* ** * *
60963 CATCGAAAAATTTTCTTTGCCTTATTTTTCATAAAATCAAAGTTTGCATTTTAAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* *
61028 ATTGATTCTCGTAACAGTTTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
*
61093 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCATTATTGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* * * *
61158 TCAAAGCTGTCTCTTAAATAAGACAAACAGGAATACTCATACTAATCCCCATTCTTTTCTTGGTT
325 TCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATT
* * *
61223 AGGCACCATAAACCTAGTCTTCTTATACGGATACATGATATTGATGCTTCGGTTTCGTAAGATAC
390 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATAC
* * *
61288 GGTTTCGTCCCACCACTTTGT
455 GCTTTCTTCCCACCAATTTGT
* * * * * *
61309 GCAAATTTTAAATCCGTGCCTCAAATGAGACAAACATGGATTCTAGTATGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* *
61374 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATGCACGATATTGATGGTTTTCCTTTT-
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTT-CTTTTG
* *
61438 AATGGAAATCTTTTCTTTGCCTAATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* * ** * * * * * * *
61503 ATGGATTCTAGT-ATGGATCTTCATTCGTTTCATGATTACGCACTATAAACACAATCTCC--TCA
195 ATTGATTCTCGTAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC-AT-TCCTTTCA
* * * * ** * * * * * * * *
61565 TTATGATGCATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTT--GCC-TTATTTTCC
257 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTA--TT-G
* * * ** * * * * *
61627 ATA-ATATGAAAGTT-TGCACTTTAAATGAGACATGCATTG-ATTCTCGTAATAGTCTCCATTCT
319 ATAGA-ATCAAAGTTGT-CTC-TTAAATAAGACAAACA-TGAATACTCATACTAATCCCCATTCT
* * * * * * * *
61689 TTTCAAGATTAGGAACAAAAAACACATTATT-TTCAT-CAGGATACATGACATTGATGCTTTGGT
380 TTTCTAGATTAGGCACCATAAACATAGTCTTCTT-ATAC-GGATACATGATATTGATGCTTTGGT
* * * * *
61752 GTCGCAAGAGAAGCTTGTCTTTCCACC-GTTAT-T
443 TTCGCAAGATACGCTT-TCTTCCCACCAATT-TGT
* * * * *** **
61785 GATAGAATT-AAAGTTC-T--CTTAAATAAGACAAACA-GGAATACTCA-TACTAATCCCCATTC
1 G-TA-AATTCTAAGTTCTTGCCTCAAATGAGACAAACATGG-ATTCT-AGTAAGGATCTTCATTC
* * * * * * * **
61844 TTTTC-TGGATTAGGCACCATAAACATAGTCTTCTTAT-ACGGATACATGATATTGATGCTTTGG
62 ATTTCAT-GATTAGGCACTATAAACACATTCTCCTCATCA-GGATACATGATATTGATGGTTTTC
* * * ** ** * * * *
61907 TTTCGCA-AGATATGC-TTTCTTCCCACCAATTTGT--GTAAATTCTAAGTTCATGC-C-TCAAA
125 TTTTGCATGGAAAT-CTTTTCTTTGC-CTTATTT-TCCATAAAATCAAAGTT--TGCACTTTAAA
** * * ** * * * * * *
61966 TGAGACAAACATGGATTCTAGT-ATGGATCTTCATTCATTTCATGATTAGGCACTATAAACACAT
185 TGAGACATGCATTGATTCTCGTAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAT
* * * * * * * *** * *
62030 T-CTCCTCATCAGGATGCACGATATTGATGGTTT--TCCTTTTAATG-GAAATCTTTTCTTTGCC
249 TCCT-TTCATTAGGATACATGACATTGATGCTTTGGT-GTCGCAA-GAG-AAGCTTGTCTTT-CC
* * * * * ** ** * *
62091 TA--ATT-TTCCATAAAATCAAAGTT-TGCACTTTAAATGAGACATGCATTG-ATTGTCGTA-AA
309 -ACCGTTATT-GATAGAATCAAAGTTGT-CTC-TTAAATAAGACAAACA-TGAATACTCATACTA
* * * * * * * * *
62150 AGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTT-TTATTA-GGATACAGGACAA
369 A-TCCCCATTCTTTTCTAGATTAGGCACCATAAACATAGT-CTTCTTA-TACGGATACATGATAT
* *** * * * * * **
62213 TGTTGCTTTGGGGGCGCAAGAGAAGCCTGTCTTTCCATCGTTATTGAT
431 TGATGCTTTGGTTTCGCAAGATACG-CTTTCTTCCCACCAAT-TTG-T
* * * * * * **
62261 G-GAA-TCGAAG-T-TTGTCTCTTAAATAAGACAAACATGAATACTCATGCT-A--ATCCCCATT
1 GTAAATTCTAAGTTCTTG-C-CTCAAATGAGACAAACATGGATTCT-A-G-TAAGGATCTTCATT
* * *** * * * * * *
62319 CTTTTC-TAGATTAGGCACCATAAATTTAGTCTTCTTAT-ATGGATACATGGTATTGATGCTTTG
61 CATTTCAT-GATTAGGCACTATAAACACATTCTCCTCATCA-GGATACATGATATTGATGGTTTT
* * * * * ** * * *
62382 GTTTCGCA-AGATA-CGCTTTCTTCT-CACCAATTTGT--GTAAAGT-ATGAG-TT-CA-TTGCT
124 CTTTTGCATGGAAATC-TTTTCTT-TGC-CTTATTT-TCCATAAAATCA-AAGTTTGCACTT--T
** ** * ** * * * * * *
62438 CAAATGAGACAAACAGGGATTCTTGT-AGGGATCTTCATTCATTTCATGATTAGGCACTATAAAC
182 -AAATGAGACATGCATTGATTCTCGTAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAAC
** * * * * * ** * * * * *
62502 ACATT-CTCCGCTTTAGGATAAATGATATTCATGGTTTTCTTTTGCATG-GAA--ATCT-TTTCC
245 ACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCC
** * * * * ** * * **
62562 TATCAATTTTTG-TA-AATTCTAAGTTCGTGC-CTCAAATGATTCAAACATGCATGCT-AGTAAG
309 -A-CCGTTATTGATAGAA-TCAAAGTT-GT-CTCTTAAATAAGACAAACATGAATACTCA-TACT
* ** * * * * * * *
62623 GATCTTCATTCATTTC-ATGATTAGGCACTATAAACACATTCTCCTCGAT-CGGATAAATGATAT
368 AATCCCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCT-TATACGGATACATGATAT
* ** * * * * * * * *
62686 TGATGATTTTCTTTTGCATGGAAATC-TTTTCTTTGCC-CTATTTTCT
431 TGATGCTTTGGTTTCGCA-AGATA-CGCTTTC-TTCCCACCAATTTGT
* * * * ** * * * * *
62732 ATAAAATCAAAGTT-TT-CACTTTAAATGAGACATGCATTGATTCTCGTAA-AAGTCTCCATTCT
1 GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATTCA
* * * * * * * * * * * * ****
62794 TTTTAAGATTAGGAACCAAAAACACATAC-CTTTCATTAGCATACACGACATTGATGCTTTGGGG
63 TTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTCTT
* * * * * * * *
62858 TTGCA-AGAGAAGCTTGTCTTTCCACCGTTA--TT-GATAGAATCAAAG-TTGTC-TTTTAAATA
127 TTGCATGGA-AATCTTTTCTTT--GCC-TTATTTTCCATAAAATCAAAGTTTG-CACTTTAAATG
** * * * * ** * * * *
62917 AGACAAACA-TGAATACTCATACTAA-TCCCCATTCTTTTCTGGATTAGGCACCATAAACATAGT
187 AGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT
* * * * * * * * * * * **
62980 -CTTCTTATAAAGATATATGATATTGATGCTTTAGTTTCGCATGATACGCTT-TCTTCCCACTAA
250 CCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAC-CG
* * * * * * ** *** **
63043 TTTTTGA-A-AATTCTAAGTTCGTAC-CTCAAATGAGACAAACATGGATTCTGGTAAGGATCTTC
313 TTATTGATAGAA-TCAAAGTT-GT-CTCTTAAATAAGACAAACATGAATACTCATACTAATCCCC
* * * * * * * * * *
63105 ATTCATTTC-ATGATTTGGCACTATAAACACATTCTCCTCATAAGGATGCATGATATTGATGGTT
375 ATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTT
** * ** * * ** **
63169 TTCTTTTGCGTGGAAATC-TTTTCTTTGC-CTTATTT-T
439 TGGTTTCGC-AAGATA-CGCTTTCTTCCCACCAATTTGT
* * * * ** * *
63205 CCATAAAATCAAAG-T-TTGCACTTTAAATGAGACATGCAAT-GATTCTCA-T-AGCAGTCTCCA
1 --GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAAC-ATGGATTCT-AGTAAGGA-TCTTCA
* * * * * * * * * *
63265 TTCTTTTCAAGAATT-GGAACCAAAAAACACATT-TCTTCATTAGGATACTTGACATTGATGCTT
59 TTCATTTCATG-ATTAGGCA-CTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTT
**** ** * * * * * * * * * *
63328 TGGGGTCACA-AGAGAAGCTTGTGTTTCCACCGT-TTAT-GATAGAATC-AAG-TTG-TCTCTTA
122 TTCTTTTGCATGGA-AATCTTTTCTTT--GCCTTATTTTCCATAAAATCAAAGTTTGCACT-TTA
** ** * * * * ** * ** ** * *
63387 AAAAAGACAAACA-GGAATACCCATACTAGTCCCCATTCTTTTCTGGATTAGGCCCCATAAACAT
183 AATGAGACATGCATTG-ATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC
* * * * * * * * * *
63451 AGTCTTTTTA-TACGGATACATGATATTGAGGCTTTGGTTTCGCAAGATACGCTT-TCGTCCCAC
247 ATTCCTTTCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAC
* * * * * * * * * *
63514 CAATT-TGTG-TAAAATCTAAGTCCG-CACCTCAAATGAGACAAACATGGATTCT-AGTA-TGGA
311 C-GTTAT-TGATAGAATCAAAGT-TGTC-TCTTAAATAAGACAAACATGAATACTCA-TACT-AA
** * * * * * * ** *
63574 TCTTCACTCATTTC-ATGATTAGGCACTATAAACACATTCTCCTCCT-CAGGATGCATGATATTG
370 TCCCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTTATAC-GGATACATGATATTG
* ** * ** * ** ** **
63637 ATGGTTTTCTTTTGCATCAAAATCTTTTCTTTGC-CTTATTT-T
433 ATGCTTTGGTTTCGCAAGATACGC-TTTCTTCCCACCAATTTGT
* * * * ** * * * *
63679 CCATAAAATCAAAG-T-TTGCACTTTAAATGAGACATGCATTGATTCTCGTAA-CAGTCTCCATT
1 --GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATT
* ** * * * * * * * **
63741 CTTTTCAACATTAGGAACCAAAAACACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGG
61 CATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTC
* * * * * ** * *
63805 TGTCGCA-AGAGAAGCTTGTCTTT-CCACCATTATT-GA-AAGAATCAAAG-TTGTC-TTTTAAA
125 TTTTGCATGGA-AATCTTTTCTTTGCC-TTATT-TTCCATAA-AATCAAAGTTTG-CACTTTAAA
* ** * * * * * ** * * * **
63864 TAAGACAAACA-TGAATACTCTTACTAA-TCCCCAATCTTTTCTGGATTTGGCACCATAAACGTA
185 TGAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACA
* * * * * * * *
63927 GT-C-TTCGTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTT-TCGTCCCAC
248 TTCCTTTCAT-TA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAC
* * * * * * * *
63989 CAATT-TGTG-TAAAATCTAAGTCCGTGC-CTCAAATGAGACAAACATGGAT--TC-TAGT-ATC
311 C-GTTAT-TGATAGAATCAAAGT-TGT-CTCTTAAATAAGACAAACATGAATACTCATACTAATC
** * * * * * ** * *
64047 TTCATTCATTTC-ATGATTAGGCACTATAAACACATTCTCCTCCT-CAGGATGCATCATATTAAT
372 CCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTTATAC-GGATACATGATA-T--T
* * * ** **
64110 GGATTTCTTTGGCTTCG-AA-AT-C-TTTTCTTTGC-CTTATTT-T
432 -GA-TGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCAATTTGT
* * * * ** * * * *
64150 CCATAAAATCAAAG-T-TTGCACTTTAAATGAGACATGCATTGATTCTCGTAA-CAGTCTCCATT
1 --GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATT
* * * * * * * * * * * * **
64212 CTTTTCAAGATTAGGAACCAAAAACACATTC-CTTTGATTAAGATACTTGACATTGATGCTTTGG
61 CATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTC
* * * * * ** * * *
64276 TGTCGCA-AGAGAAGCTTGTCTTT-CCACCATTATT-GATAGAATCAAAG-TTGTC-TTTTAAAT
125 TTTTGCATGGA-AATCTTTTCTTTGCC-TTATT-TTCCATAAAATCAAAGTTTG-CACTTTAAAT
* ** * * * * * ** * * *
64336 AAGACAAACA-TGAATACTCTTACTAA-TCCCCATTCTTTT-ATGGATTTTGCACCATAAACATA
186 GAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCA-AGATTAGGAACCAAAAACACA
* * * * * *
64398 GT-C-TTCTTATATGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTT-T-TTTCCCA
248 TTCCTTTCAT-TA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTT-CCA
* * * * * * * * * ** *
64459 CCAATT-TGTG-TAAAATCTAAGTCCG-CGCCTCAAATGAGACAAACATGGATTCTGGTA-TGGA
310 CC-GTTAT-TGATAGAATCAAAGT-TGTC-TCTTAAATAAGACAAACATGAATACTCATACT-AA
** * * * * * * ** * *
64520 TCTTCACTCATTTC-ATGATTAGGCACTATAAACACATTCTCCTCCT-CAGGATGCAAGATATTG
370 TCCCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTTATAC-GGATACATGATATTG
* ** * * * * ** ** *
64583 ATGGTTTTCTTTTGCATCGAAATC-TTTTCTTTGC-CTTATTTTT
433 ATGCTTTGGTTTCGCA-AGATA-CGCTTTCTTCCCACCAATTTGT
* * * * * ** * * * *
64626 CATAAAATCAAAG-T-TTGCACTTTAAAGGAGACATGCATTGATTCTCGTAA-CAGTCTCCATTC
1 -GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATTC
* * * * * * * * * * **
64688 TTTTTTAAGATTAGGAACCAAAAACACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGG
62 -ATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTC
* * * * * ** * * * *
64752 TGTCGCA-AGAGAAGCTTGTCTTT-CCACCATTATT-GATAGAATCAAAG-CTG-TCTCTTAAAT
125 TTTTGCATGGA-AATCTTTTCTTTGCC-TTATT-TTCCATAAAATCAAAGTTTGCACT-TTAAAT
* ** * * * * * ** * * *
64812 AAGACAAACA-GGAATACTCATACTAA-TCCCCATTCTTTTCTTGGTTAGGCACCATAAAC-CTA
186 GAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC-A
* * * * * * * *
64874 GT-C-TTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTT-TCGTCCCAC
248 TTCCTTTCAT-TA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAC
* * * * * *
64936 CAATT-TGTG-TAAAATCTAAGTCCCTG-C-CTCAAATGAA-ACAAACATGGATTCT-AGTA-TA
311 C-GTTAT-TGATAGAATCAAAGT---TGTCTCTTAAAT-AAGACAAACATGAATACTCA-TACTA
** * * * * ** *
64994 GATCTTCATTCTTTTC-ATGATTAGGCACTATAAACACATTCTCCTCCT-CAGGATGCATGATAT
369 -ATCCCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTTATAC-GGATACATGATAT
* ** * * ** ** **
65057 TGATGGTTTTCTTTTGCATCGA-AATCTTTACTTTGC-CTTATTT-T
431 TGATGCTTTGGTTTCGCA-AGATACGCTTT-CTTCCCACCAATTTGT
* * * * ** * * *
65101 CCATAAAATCAAAG-T-TTGCACTTTAAATGAGACATGCACT-GATTCTCGTAA-CAGTCTCCAT
1 --GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACA-TGGATTCTAGTAAGGA-TCTTCAT
* * * * * * * * * *
65162 TCTTTTCAAGATTAGGAACCAAAAACACATTC-CTTTCATTAGGATACATGACATTGATGCTTTG
60 TCATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTT
* * * * * * * * * * *
65226 GTGTCGCAAGAAAAGCTTGTCTTTCCGCCGTTA--TT-GATAGAATCAACG-TTGTC-TTTTAAA
124 CTTTTGCATGGAAATCTTTTCTTT--GCC-TTATTTTCCATAAAATCAAAGTTTG-CACTTTAAA
* ** ** * * * * * ** *
65286 TTAGACAAACA-TGAACACTCATACTAA-TCCCCATTCTTTTCTAGATTAGGCACCGTAAACATA
185 TGAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACA
* * * * * * * * *
65349 GT-C-TTCTTATACGAATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTT-TCGTCCCAC
248 TTCCTTTCAT-TA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAC
* * * * * * * *
65411 CAATT-TGTG-TA-AATTCTAAGTCCGTGC-CTCAAATGAGACAAACATGGATTCT-AGTA-TGG
311 C-GTTAT-TGATAGAA-TCAAAGT-TGT-CTCTTAAATAAGACAAACATGAATACTCA-TACT-A
** * * * * * * * *
65470 ATCGTCATTCATTTC-ACAATTAGGCACTATAAACACATTCTCCTCAT-CAGG-TGCATGATATT
369 ATCCCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTTATAC-GGATACATGATATT
* ** * * * * * ** **
65532 GATGGTTTTTTTTTGCATGGAAATC-TTTTCTTTGCC-TTAATTTCC
432 GATGCTTTGGTTTCGCA-AGATA-CGCTTTC-TTCCCACCAATTTGT
* * * * ** * * *
65577 ATAAAATCAAAG-T-TTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTATC--CATTC
1 GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGT--AAGGATCTTCATTC
* * * * * * * * * * **
65638 TTTTCAAGATCAGGAACCAAAAACACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGT
62 ATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTCT
* * * * * * * * * *
65702 GTCGCA-AGAGAAGCTTCTCTTTCCACCGTGA--TT-GATAGAATCAAAG-TTG-TCTCTTAAAT
126 TTTGCATGGA-AATCTTTTCTTT--GCC-TTATTTTCCATAAAATCAAAGTTTGCACT-TTAAAT
* * ** * * ** * * *
65761 AAGACA-GACA-GGAACACTCATACTAA-TC-CCTATTCTTTTCTGGATTAGGCACCATAAACAT
186 GAGACATG-CATTG-ATTCTCGTA-AAAGTCTCC-ATTCTTTTCAAGATTAGGAACCAAAAACAC
* * * * * * * * * *
65822 AGTCTTTTTA-TACGGATACATGATATTGAGGCTTTGGTCTCGCAAGATACGCTT-TCGTCCCAC
247 ATTCCTTTCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCAC
* * * * * *
65885 CACTT-TGTG-TA-AATTCTAAGTTTGGGC-CTCAAATGAGACAAACATCG-ATTCT-AGTA-TG
311 C-GTTAT-TGATAGAA-TCAAAG-TT-GTCTCTTAAATAAGACAAACAT-GAATACTCA-TACT-
* ** * * * * * * *
65943 GATCTTCATTCATTTC-ATGATTAGGCACTATAAACA-CGTTCTCCTCA-GCAGGATGCATGATA
368 AATCCCCATTCTTTTCTA-GATTAGGCACCATAAACATAG-TCTTCTTATAC-GGATACATGATA
* ** * * * * ** **
66005 TTGATGGTTTTCTTTTGCATCGAAATC-TTTTCTTTTC-CTTATTT-T
430 TTGATGCTTTGGTTTCGCA-AGATA-CGCTTTCTTCCCACCAATTTGT
* * ** * ** * * * *
66050 CCATAAAATAAAAG-T-TTGCACTTTAAATGAGACATGCATTGATTCTCGTAA-CAGTCTCCATT
1 --GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATT
* * * * * * * ** * **
66112 CTTTTCAAGATTAGGAACCAAAAACACATTC-CTTTCATTAGGATACATGGCATTGATGCTTTGG
61 CATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTC
* * ** * * ** * * *
66176 TGTCGCA-AAAGAAGCTTGTCTTT-CCACCATTATT-GATAGAATCAAAG-TTGTC-TTTTAAAT
125 TTTTGCATGGA-AATCTTTTCTTTGCC-TTATT-TTCCATAAAATCAAAGTTTG-CACTTTAAAT
* ** * * * * * ** * * * ** *
66236 AAGACAAACA-TGAATACTCTTACTAA-TCCCCAATCTTTTCTGGATTTGGCACCATAAACGTAG
186 GAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAT
* * * * * * * *
66299 T-C-TTCGTATACGGATACATGATATTAATGCTTTGGTTTCGCAAGATACGCTT-TCGTCCCACC
249 TCCTTTCAT-TA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACC
* * * * * * * * *
66361 AATT-TGTG-TAAAATCTAAGTCCGTGC-CTCAAATGAGACAAACATGGAT--TC-TAGT-ATCT
312 -GTTAT-TGATAGAATCAAAGT-TGT-CTCTTAAATAAGACAAACATGAATACTCATACTAATCC
* * * * * * * ** * *
66419 TCATTCATTTCAAGATTAGGCACTATAAACACATTCTCCTCCT-CAGGATGCATCATATTAATGG
373 CCATTCTTTTCTAGATTAGGCACCATAAACATAGTCTTCTTATAC-GGATACATGATA-T--T-G
* * * ** **
66483 ATTTCTTTGGCTTCG-AA-AT-C-TTTTCTTTGC-CTTATTT-T
433 A-TGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCAATTTGT
* * * * ** * * * *
66521 CCATAAAATCAAAG-T-TTGCACTTTAAATGAGACATGCATTGATTCTCGTAA-CAGTCTCCATT
1 --GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATT
* * * * * * * * * **
66583 CTTTTCAAGATTAGGAACCAAAAACACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGG
61 CATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTC
* * * * * * * * *
66647 TGTCGCA-CGAGAAGCTTGTCTTTG---TA--TT-GATAGAATCAAAG-TTGTC-TTTTAAATAA
125 TTTTGCATGGA-AATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTG-CACTTTAAATGA
** * * * * * ** * * * *
66703 GACAAACA-TGAATACTCTTACTAA-TCCCCATTCTTTT-ATGGATTTTGCACCATAAACATAGT
188 GACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCA-AGATTAGGAACCAAAAACACATT
* * * * *
66765 -C-TTCTTATATGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTT-T-TTTCCCACC
250 CCTTTCAT-TA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTT-CCACC
* * * * * * * * * ** *
66826 AATT-TGTG-TAAAATCTAAGCCTG-CGCCTCAAATGAGACAAACATGGATTCTGGTA-TGGATC
312 -GTTAT-TGATAGAATCAAAG-TTGTC-TCTTAAATAAGACAAACATGAATACTCATACT-AATC
** * * * * * * * ** * *
66887 TTCACTCATTT-GATGATTAGGCACTATAAACACATTCTCCTCCT-CAGGATGCAAGATATTGAT
372 CCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTTATAC-GGATACATGATATTGAT
* ** * * * * ** ** *
66950 GGTTTTCTTTTGCATCGAAATC-TTTTCTTTGC-CTTATTTTT
435 GCTTTGGTTTCGCA-AGATA-CGCTTTCTTCCCACCAATTTGT
* * * * ** * * * *
66991 CATAAAATCAAAG-T-TTGCACTTTAAATGAGACATGCATTGATTCTCGTAA-CAGTCTCCATTC
1 -GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATTC
* * * * * * * * * *
67053 TTTTTTAAGATTAGGAACCGA-AAACACATTC-CTTTCATTAGGATACATGACATTGATGCTTTG
62 -ATTTCATGATTAGGCA-CTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTT
* * * * * * ** * * * *
67116 GTGTCGCA-AGAGAAGCTTGTCTTT-CCACCATTATT-GATAGAATCAAAG-TTGTC-TTTTACA
124 CTTTTGCATGGA-AATCTTTTCTTTGCC-TTATT-TTCCATAAAATCAAAGTTTG-CACTTTAAA
* ** * * ** * ** * * *
67176 TAAGACAAACA-TGAATACTCTTCCTAA-TCCCCATTCTTTTCTGGATTTGGCACCATAAAC-CT
185 TGAGACATGCATTG-ATTCTCGT-AAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC-
* * * * * * * *
67238 AGT-C-TTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTT-TCGTCCCA
247 ATTCCTTTCAT-TA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCA
* * * * * * *
67300 CCAATT-TGTG-TAAAATCTAAGTCCCTG-C-CTCAAATGAGACAAACATGGATTCT-AGTA-TA
310 CC-GTTAT-TGATAGAATCAAAGT---TGTCTCTTAAATAAGACAAACATGAATACTCA-TACTA
*** * * * * * ** *
67359 GATCTTTACTCTTTTC-ACGATTAGGCACTATAAACACATTCTCCTCCT-CAGGATGCATGATAT
369 -ATCCCCATTCTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTTATAC-GGATACATGATAT
* ** * * * * ** **
67422 TGATGGTTTTCTTTTGCATCGAAATC-TTTTCTTTGC-CTTATTT-T
431 TGATGCTTTGGTTTCGCA-AGATA-CGCTTTCTTCCCACCAATTTGT
* * * * ** * * *
67466 CCATAAAATCAAAG-T-TTGCACTTTAAATGAGACATGCACT-GATTCTCGT-AGCAGTCTCCAT
1 --GTAAATTCTAAGTTCTTGC-C-TCAAATGAGACAAACA-TGGATTCTAGTAAGGA-TCTTCAT
* * * * * * * * * *
67527 TCTTTTCAAGATTAGGAACCAAAAACACATTC-CTTTCATTAGGATACATGACATTGATGCTTTG
60 TCATTTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTT
* * * * * * * *** * * * ** * *
67591 GTGTTGCAAGAAAAGCCCAAAAACACATTCCTTT-CATTAGGATACATGACATTGATGCTTTG-G
124 CTTTTGCATG----G-----AAA-TCTTTTCTTTGCCTTATTTTCCATAAAATCAAAG-TTTGCA
** * * * * * * ** * * *
67654 GGTCACAA-GAGA-A-GCTTTTCTATCTATTGTTATGGATAGAATCAAAGTTTGTTACTTAAATA
178 CTTTA-AATGAGACATGC-ATT-GAT-TCTCG-TA---AAAGTCTC-CA--TTCTT--TT---CA
** * * * *
67716 AGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCT
227 AG---ATTA-GGA-AC-CA-A--AA-ACACATTCCTTTC---ATTAGG----------ATA----
* * * *
67781 TCTCATAAAGATACAAGATATTGATGATTTGGTTTCGCAAGA-AACGCTT-T-TTTCTCACCAAT
265 ---CAT---G--AC-A-T---TGATGCTTTGGTGTCGCAAGAGAA-GCTTGTCTTTC-CACC-GT
* * * * * * * *** **
67843 TTTTG-TA-AATTCTATGTTCGTGC-CTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTC
314 TATTGATAGAA-TCAAAGTT-GT-CTCTTAAATAAGACAAACATGAATACTCA-TACTAATCCCC
* *** * * * ** * * *
67904 ATTCATTTCGT-GATTAGGCATTGTAAACACATTCTCCCCATTA-GGATAAATGATATTTATGGT
375 ATTCTTTTC-TAGATTAGGCACCATAAACATAGTCTTCTTA-TACGGATACATGATATTGATGCT
** * * * ** ** *
67967 TTTCTTTTGCATAGAAATC-TTTTCTTTGC-CTTATTTTT
438 TTGGTTTCGCA-AGATA-CGCTTTCTTCCCACCAATTTGT
* * * * * * * * * * * * * *
68005 CTTAAAATCAAAGTTTTTACTTTAAATGAGACAAGCATTGATTCTCGTAA-AACTCTCCAATCTT
1 -GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATTCAT
* * * * * * * * * * ** *
68069 TTCAAGATTGGGAACCAAAAACACATTC-CTTTCATTATGATACATGACATTGATGCTTTGGTGT
64 TTCATGATTAGGCACTATAAACACATTCTC-CTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * * * * * * * *
68133 TGCA-AGAGCAGCTTGTCTTTCCACCGTTA--TT-GATAGAATAAAAGTTTG-TCTCTTAAATAA
128 TGCATGGA-AATCTTTTCTTT--GCC-TTATTTTCCATAAAATCAAAGTTTGCACT-TTAAATGA
* * * * * * *
68193 GACA--AATATGAATACTCATACTAA-TC-CACATTCTTTTCTAGATTAGGCATCGTC-AAAATA
188 GACATGCAT-TG-ATTCTCGTA-AAAGTCTC-CATTCTTTTCAAGATTAGG-AAC--CAAAAACA
* * * * *
68253 C--TCTTTTCATAAGGATACAGGAAATTGATGATTTGGCT-TCGCAAGA-ACTA-CTT-T-TTTC
246 CATTCCTTTCATTAGGATACATGACATTGATGCTTTGG-TGTCGCAAGAGA--AGCTTGTCTTT-
* * * ** * * * ** *
68311 CCACCAATTTTTG-TA-AATTCTAAGTTTGTGC-CTCGAATGATACAAACAT-AGATTCTTGTAA
307 CCACC-GTTATTGATAGAA-TCAAAG-TTGT-CTCTTAAATAAGACAAACATGA-ATACTCATAC
** ** * ** * * * * * *
68372 GGATCTTCATCCAGTTCGT-GATTAGGCACTATAAACACATTCTCCTCATTA-GGGTACATGATA
367 TAATCCCCATTCTTTTC-TAGATTAGGCACCATAAACATAGTCTTCTTA-TACGGATACATGATA
* ** * * * * * ** * *
68435 TTGATGGTTTTCTTTTGCATGGAAATC-TTTTCTTTGCC-TTATTTTCT
430 TTGATGCTTTGGTTTCGCA-AGATA-CGCTTTC-TTCCCACCAATTTGT
* * * * * * ** * * * * *
68482 TTAAAATCAAAGTT-TGTACTTTAAATGAGACATGCATTGATTCTGGTAA-AAGTCTCCATTCTT
1 GTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA-TCTTCATTCAT
* * * * * * * * * * ** *
68545 TTTAAGATTAGGAACCAAAAACCCATTACT-TTCATTAGGATACATGACATTGATGCTTTGGTGT
64 TTCATGATTAGGCACTATAAACACATT-CTCCTCATCAGGATACATGATATTGATGGTTTTCTTT
** * * * ** * * * *
68609 CACA-AGAGAAGCTTGTCTTT-CCACCATTATT-GATACAATCAAAATTTG-ACTCTTAAATAAG
128 TGCATGGA-AATCTTTTCTTTGCC-TTATT-TTCCATAAAATCAAAGTTTGCACT-TTAAATGAG
** * ** * * ** * * *
68670 ACAAACA-TGAATACTCACACTAA-TCTACATTCTTTTCTGGATTAGGCACCATAAACATCGTT-
189 ACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACA-CATTC
* * * * * * *
68732 -TTCTCATAAGGATAAATGATATTGATGCTTTGGTTTCGCAAGA-AACACTT-TCTTCCCACCAA
251 CTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA-GCTTGTCTTTCCACC-G
* * * * * *
68794 TTTTTG-T-GAAGCATAAGTTCAT-TCCTCAAATTAGACAAACATGAAT--TC-TAGCAAGGATC
313 TTATTGATAGAATCA-AAGTT-GTCT-CTTAAATAAGACAAACATGAATACTCATA-CTA--ATC
** * * ** * ** * *
68853 TTCATTCATTTTGT-GGTTAGATACTATAAACGCATTC-TCTTCATTA-GGATAAATGATATTGA
372 CCCATTC-TTTTCTAGATTAGGCACCATAAACATAGTCTTCTT-A-TACGGATACATGATATTGA
* ** * ** * ** * * * *
68915 TGGTTTTCTTTTGCATTAAAATCTTTTCTTTGCC-TCATTTTCT
434 TGCTTTGGTTTCGCAAGATACGC-TTTC-TTCCCACCAATTTGT
* * * * ** * * * *
68958 -TAGA-TCAAAGTT-TGTGCTTTAAATGAGACATTCTTTGATTCTCA-TAA-AAGTCTCCATTC-
1 GTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCT-AGTAAGGA-TCTTCATTCA
* * * * * * * *
69017 TTGCCAAGACT-GGGATCCCA-AAGCACATTC-CCTTCA-CTAGAATACATGACATTGATGCG-T
63 TT-TCATGATTAGGCA--CTATAAACACATTCTCC-TCATC-AGGATACATGATATTGATG-GTT
* * * * * * *
69077 TGC-TCT-CATAAGAAAAGCTTTTCTTT-CCATCTTTAAT-GATAAAATCAAAGTTTGTCAC-TT
122 TTCTTTTGCAT--GGAAATCTTTTCTTTGCCTTATTT--TCCATAAAATCAAAGTTTG-CACTTT
* ** * * * * * * * * **
69137 AAATAAGACAAACA-TGAATACTCATACTAA-TC-CACATTTTTTTGAGGATTAAGAATCGTAAA
182 AAATGAGACATGCATTG-ATTCTCGTA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAA
* * * * * * * * * *
69199 CATAGT-CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTTGCAAGA-AA-CGTT-TTTTT
244 CACATTCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC-TTGTCTTT
** * * * * * * *
69260 CCCATCAATTTTTG-TA-AATTCCATGCTCATG-C-CTCAAATGAGACAAACATGGATTCT-AGT
307 -CCA-CCGTTATTGATAGAA-TCAAAG-T--TGTCTCTTAAATAAGACAAACATGAATACTCA-T
*** ** * * * * * * *
69320 AAGGATCTTCATTCATTTCGT-GATTAGGCACTATAAACACAATCTCCTCAT-CAGGATGCATGA
365 ACTAATCCCCATTCTTTTC-TAGATTAGGCACCATAAACATAGTCTTCTTATAC-GGATACATGA
* * ** * ** * *** *
69383 TATTTATGGTTTTCTTTAGCATA-AGTTTGTACTTTAAGTGAGACATGCATTGATTCT-T
428 TATTGATGCTTTGGTTTCGCA-AGA-TACG--CTTT--CT-TCCCA-CCA---ATT-TGT
* * * * * *
69441 GTAAAAGTCTCCA-TTCTT---TTAAGATTGGAAACCAAAAAACAT-AATTCCTTTA-TTAGGA-
1 GT-AAATTCT-AAGTTCTTGCCTCAA-A-T-GAGA-C---AAACATGGATT-C--TAGTAAGGAT
* * * * * ** * * * * * *
69499 -TACATGGCAATGT--TGCTTTGGTGCTACAAGAGAAGCTTGTCTTCC-CA-C-CGTTA-TTGAT
54 CTTCAT-TC-ATTTCATGATTAGGCACTATAA-A-CA-CAT-TC-TCCTCATCAGGATACATGAT
* * ** * ** * * * *
69557 GGAATCAAAGTTTGTCTCTTAAATAAGGCAAAAATGTATACTCATACTAATCCACATTCTTTTCT
112 --ATTGATGGTTT-TCTTTTGCAT--GG---AAATCT-T--T--T-CT-TTGC-C-TTATTTTC-
* * ** * * * * * * *
69622 GGATTAGGCAGCAT-AAACATAG-TCTTCTCATAA-GCATAAATGATATTGATTCTTTGGTTTCG
159 -CA-TA---A-AATCAAAGTTTGCACTT-T-A-AATG-AGACATG-CATTGATTC--TCG--T-A
* *** * * ** * * *** * * * * * *
69684 CAAGAAACGCTTTCTTCTGGGCAATTTTTGTAAAGTATAA-GC--TCGTGTCTCA-AATGAGACA
208 AAAGTCTC-CATTCTT-T--TCAAGATTAGGAACCAAAAACACATTCCT-T-TCATTAGGATACA
* * * * * * * * * *
69745 -AACGTGGAT--TCT--AGT---AAG-G-ATC-T-TCATT-CATTTCGTGATTAGGCACTATAAA
267 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCA--CCGTTATT--G-A-TA-GAA
* * * * *** * ** ** * *** *
69797 T-ACA-TTCTCCTCATTAGGATAAATGATATTTATG-GTTTTC-TTTTGCAT-GAAAATCTTTTC
325 TCAAAGTTGT-CTC-TTA-AAT-AA-GACAAACATGAATACTCATACT-AATCCCCATTCTTTTC
* * **** * * * ** * *
69857 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTT-TAAATGAGACATG-CA-T-ATGCTTTGG
384 -TAG-ATTAGGCACCAT-AAA-CATAGTCT-T-CTTAT-ACGGATACATGATATTGATGCTTTGG
* * * ** **
69918 TGTT-GCAAGAGAAGCTTTTCTTTCCA-CTGTTAAT
442 T-TTCGCAAGATACGC-TTTCTTCCCACCAATTTGT
* * * * * * * * *
69952 GATAAAATCAAAGTTCAT-CTCTTAAATAAGACAAACATGAATATTCCTACTAA-TA-C-CCATT
1 G-TAAATTCTAAGTTCTTGC-CTCAAATGAGACAAACATG--GATT-CTAGTAAGGATCTTCATT
* * * * * * * * **
70013 CTTTTTAGGATTAGGCACCATAAACACAGTCTTCTCATAAGGATAC-TGGATATTGATGATTTGG
61 CATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACAT-GATATTGATGGTTTTC
* * * ** ** ** * * *
70077 TTTAGC-TAGAAA-CAGATTT-TTCCCACCAATTTT-TGTAAATTCTAAGTTCGTGC-C-TCAAA
125 TTTTGCATGGAAATC--TTTTCTTTGC-CTTATTTTCCATAAAATCAAAGTT--TGCACTTTAAA
** * * ** * * * *
70136 TGAGACAAACA-TGAATTCTAGT-AAAGATCTTCATT-TATTTCGGGATTAGGCACTATAAATAC
185 TGAGACATGCATTG-ATTCTCGTAAAAG-TCTCCATTCT-TTTCAAGATTAGGAACCAAAAACAC
* * * * ** * * *** * * *
70198 ATT-CTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGTGTG-GAAATCTTTTC-TT-CG
247 ATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG-AAGCTTGTCTTTCCA
** * * * * ** * ** *
70259 CC-TTATTTCCCTTAAAATCAAA-TTTTATACTTTAAATGAGACATGCATTG-ATTCTTGTA-AA
310 CCGTTA-TT--GATAGAATCAAAGTTGTCT-C-TTAAATAAGACAAACA-TGAATACTCATACTA
** * * * * * * *
70320 AGTCTTCATTCCTTTT-AAGACTAGGAACCAAAAACACAGTCTT-TTCATTA-GGATACAAGACA
369 A-TCCCCATT-CTTTTCTAGATTAGGCACCATAAACATAGTCTTCTT-A-TACGGATACATGATA
* * * *
70382 TTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTCCTC-CC-GTTAT-T
430 TTGATGCTTTGGTTTCGCAAGATACGCTT-TCTTCC-CACCAATT-TGT
* * * * * * * ***
70428 GATAGAA-TCAAAGATTGTCTG--TTAAATAAGATAAACATGAATACTCA-TACTAATC--CACT
1 G-TA-AATTCTAAG-TTCT-TGCCTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTCA-T
* * ** * * ** * * * *
70487 ATCTTTTC-TGGATTAGACACCGTAAAAATAGCCTTCTCATAAGGATACAGGATATTGATGATTT
60 -TCATTTCAT-GATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTT
* * * ** ** ** * * * **
70551 TGTTTTGCA-AGAAAGGCTTTT-TTCCCACCAATTTT-TGTAAATTCTAAGTTCGTGC--T-AAT
123 TCTTTTGCATGGAAA-TCTTTTCTTTGC-CTTATTTTCCATAAAATCAAAGTTTGCACTTTAAAT
** * * * * ** * * * *
70610 GAGACAAACA-TGAATTCTGGT-AAGGATCTTCATTCATTTCGGGATTAGGCACTATAAATACAT
186 GAGACATGCATTG-ATTCTCGTAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAT
* * * ** * * * * * *
70673 T-CTCCTCATTAGGATACATGATATTGATGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGCC-T
249 TCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG-AAGCTTGTCTTT-CCAC
* ** * * * * * ** * * * *
70735 CATT-TTCCTTAAAATCAAAGTTTGTATTTTAATTGAGACATGCATTG-ATTCTCGTA-AAAGTA
311 CGTTATT-GATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAATACTCATACTAA-TC
* * * * * * * *
70797 TCCATTCTTTCCAAGATTAGG-ATCCAAAAACACT-TTC-CCTTCATTA-GGATAAATGACATTG
372 CCCATTCTTTTCTAGATTAGGCA-CCATAAACA-TAGTCTTCTT-A-TACGGATACATGATATTG
* * * * * ***
70858 ATGCTTTGGTGTT-GCAAGAGAAGCTTTTTTTTCCACC-GTTAACA
433 ATGCTTTGGT-TTCGCAAGATACGC-TTTCTTCCCACCAATT-TGT
* * * * * * * *** ** *
70902 ATACAA-TCAAAG-T-TTGTCTCTTAAATAAGACAAACATGAATACTCGTACTAATCCCCATTCT
1 GTA-AATTCTAAGTTCTTG-C-CTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
* * * * * * * * * * **
70964 TTTCAGGATTAAGCACCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTT
63 TTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * * ** * *** *
71029 CGCA-AGAAA-CGTTTT-TTTCCCATTAATTTCTGTAAATTCTTTGTTCATGC-C-TCAAATGAG
128 TGCATGGAAATC-TTTTCTTTGCC-TTATTTTCCATAAAATCAAAGTT--TGCACTTTAAATGAG
** * * * * ** * * *
71089 ACAAACATAGATTCTAGT-AAGGATCTTCATT-TATTTCGTGATTAGGGACTATAAACACAATCT
189 ACATGCATTGATTCTCGTAAAAG-TCTCCATTCT-TTTCAAGATTAGGAACCAAAAACAC-AT-T
* * * * ** * * * * *
71152 CCTTGTC---ACGATGCATGATATTGATGGTTTTCTTTTGCAAG-GAAATCTTTTCTTT--GCC-
250 CCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG-AAGCTTGTCTTTCCACCG
** * * * * *
71210 TTATTTTCCTTAAAATCAAAGATTGTACT-TTAAATGAG-CAAGCATTG-ATTCTCATA-AAAGT
313 TTA--TT-GATAGAATCAAAG-TTGT-CTCTTAAATAAGACAAACA-TGAATACTCATACTAA-T
* * * * * * * *
71271 CTCCATTCTTTTCAAGATT-GAGAACCAAAAACAAATTCCTT-TCATTA-GGATACATGACATTG
371 CCCCATTCTTTTCTAGATTAG-GCACCATAAACATAGT-CTTCTTA-TACGGATACATGATATTG
* * * * * * *
71333 ATACATTGGTCTCGCAAGAGAAGCCTTTCTTTCCACC-GTTAT-T
433 ATGCTTTGGTTTCGCAAGATACG-CTTTCTTCCCACCAATT-TGT
* * * * * * * *
71376 AATAGAA-TCAAAG-T-TTGTCTCTTAAATAAGACAAACATGAATACTCA-TACA-AATCTACAT
1 -GTA-AATTCTAAGTTCTTG-C-CTCAAATGAGACAAACATGGATTCT-AGTA-AGGATCTTCAT
** * * * * * * * * *
71436 TC-TTTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACCTGATAATGATGCTTTG
60 TCATTTCAT-GATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTT
** * * ** ** ** *
71500 GATTCGCA-AGAAATGCTTTT-TTCCCCCCAATTTT-TGTAATAT-ATAAG-TT-CA-TTCCTCA
124 CTTTTGCATGGAAAT-CTTTTCTT-TGCCTTATTTTCCATAAAATCA-AAGTTTGCACTT--T-A
** * * * * * * ** * * ** *
71558 AATGAGACAAACATAGATTCTAGT-AAGGATCTTCTTTCATTTCGGGAGTAGGCATTATAAACAC
183 AATGAGACATGCATTGATTCTCGTAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC
* * * * * * * * * ** * * *
71622 -TTTCTCCTCATTAGGATAAATGATATTAATGGGTTT-CTTTTGCCTG-GAAATCTTTTGTTTGC
247 ATTCCT-TTCATTAGGATACATGACATTGAT-GCTTTGGTGTCGCAAGAG-AAGCTTGTCTTT-C
* * ** * * * * ** * *
71684 C-TCATT-TTCCTTAGAATCAAAGTTTGTATTTTAATTGAGACATGCATCG-ATTCTCATA-AAA
308 CACCGTTATT-GATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACAT-GAATACTCATACTAA
* * * * * * * * *
71745 GTCTCCACTCTTTCCGAGATTAGG-ATCGA-AGAACACT-TTC-CCTTCATTA-GGATAAATGAC
370 -TCCCCATTCTTTTCTAGATTAGGCA-CCATA-AACA-TAGTCTTCTT-A-TACGGATACATGAT
* * * * * * * **
71805 GTTGATGCTTTGG-TGCTGCAAGAGAAGCTTTTTTTTTCCACC-GTTAAT
429 ATTGATGCTTTGGTTTC-GCAAGATACGC--TTTCTTCCCACCAATTTGT
* * * * * ** *** ** *
71853 GATAAAATCAAAG-T-TTGTCTCTTAAATAAGACAAACATGAACACTCA-TACTAATCCCCATTT
1 G-TAAATTCTAAGTTCTTG-C-CTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTCATTC
* * * * * * * * * * * * *
71915 TTTTCAAGATTAGGCACCATAAATATAGTCTTCTCTTAAGGATAAAGGATATTGATGATTTTGTT
62 ATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTT
* * * * * ** * ** *
71980 TCGCA-AGAAATGC-TTT-TTTCCCATCAATTTCTGTAAATTTTATGTTCGTGCCAC---AAATG
127 TTGCATGGAAAT-CTTTTCTTTGCC-TTATTTTCCATAAAATCAAAGTT--TG-CACTTTAAATG
** * * * * * *
72039 AGACAAACATAGATTCTAGT-AAGGATCTTCATT-TATTTCATGATTAGGGA-CAATAAACACAA
187 AGACATGCATTGATTCTCGTAAAAG-TCTCCATTCT-TTTCAAGATTAGGAACCAA-AAACAC-A
* * * ** * * * * * *
72101 TCTCCTTGTC---ACGATACATGATATTGATGGTTTTCTTTTGCATG-GAAATCTTTTCTTT--G
248 T-TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG-AAGCTTGTCTTTCCA
** * * ** *
72160 CC-TTATTTTCCTTAAAATCAAAGATTGTACT-TTAAATGAGACATGCATTG-ATTCTTGCA-A-
310 CCGTTA--TT-GATAGAATCAAAG-TTGT-CTCTTAAATAAGACAAACA-TGAATAC-T-CATAC
* * * * * * * * *
72220 -AAGTCTCCATTCGTTTT-AAGATTGGGAACCAAAAACACATTC-CCTTCATTA-GGATACCTGA
367 TAA-TCCCCATTC-TTTTCTAGATTAGGCACCATAAACATAGTCTTCTT-A-TACGGATACATGA
** * * * * *
72281 CGTTGATGCTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACC-GTTAT-T
428 TATTGATGCTTTGGTTTCGCAAGATACGCTT-TCTTCCCACCAATT-TGT
* * * * * * * *** **
72329 GATAGAA-TCAAAGTTCGT-CTCTTAATTAAGACAAACATGAATACTCA-TACTAATCCACATTC
1 G-TA-AATTCTAAGTTCTTGC-CTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTCATTC
* * * * * * * * * * * **
72391 TTTTC-TGTATAAGGCACTGTAAACATAGTGTTCTCATAAGGATAAATGATATTGACGCTTTGGT
62 ATTTCATG-ATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCT
* * * ** ** *
72455 TTTGCA-AGAAA-CACTTT-ATTGCCCCCAATTTT-TGTAAAGT-ATAAG-TT-CA-TTCCTCAA
126 TTTGCATGGAAATC-TTTTCTTTG--CCTTATTTTCCATAAAATCA-AAGTTTGCACTT--T-AA
* ** * * * * * ** * * * *
72512 ATTAGACAAACATGGATTCTAGT-AAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACAGA
184 ATGAGACATGCATTGATTCTCGTAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACA
* * * * ** * * * * * *
72576 CTCTCC--TCATTAGGATAAATGATACTGATGGTTTTCTTTTGCATGTA-AATCTTTTCTTTGCA
248 -T-TCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG-AGAAGCTTGTCTTTCCA
*** ** * * * ** * * * *
72638 TTATT-TTCCTTAAAATCAAAGTT-TGCATTTTAAATGAGACATGCATTAATTCTCGTA-AAAGT
310 CCGTTATT-GATAGAATCAAAGTTGT-C-TCTTAAATAAGACAAACATGAATACTCATACTAA-T
* * * * * * *
72700 CTCCATTCTTTTCAAGATT-GAGAACCA-AAAGCAAATTCCTT-TCATTA-GGATACATGACATT
371 CCCCATTCTTTTCTAGATTAG-GCACCATAAA-CATAGT-CTTCTTA-TACGGATACATGATATT
* * * * * *
72761 GATACTTTGGTCTCGCAAGAGAAGCCTTTCTTTCCA-CGATTAT-T
432 GATGCTTTGGTTTCGCAAGATACG-CTTTCTTCCCACCAATT-TGT
* * * * * * * *
72805 AATAGAA-TCAAAGTT-TAT-CTCTTAAATAAGACAAACATGAATACTCA-TACA-AATCTACAT
1 -GTA-AATTCTAAGTTCT-TGC-CTCAAATGAGACAAACATGGATTCT-AGTA-AGGATCTTCAT
** * * * * * * * * *
72865 TC-TTTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACCTGATAATGATGCTTTG
60 TCATTTCAT-GATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTT
** * * ** ** ** *
72929 GATTCGCA-AGAAATGCTTTT-TTCCCCCCAATTTT-TGTAATAT-ATAAG-TT-CA-TTCCTCA
124 CTTTTGCATGGAAAT-CTTTTCTT-TGCCTTATTTTCCATAAAATCA-AAGTTTGCACTT--T-A
** * * * * * * ** * ** *
72987 AATGAGACAAACATAGATTCTAGT-AAGGATCTTCTTTCATTTCGGGATTAGGCATTATAAACAC
183 AATGAGACATGCATTGATTCTCGTAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC
* * * * * * * * * ** * * *
73051 -TTTCTCCTCATTAGGATAAATGATATTAATGGGTTT-CTTTTGCCTG-GAAATCTTTTGTTTGC
247 ATTCCT-TTCATTAGGATACATGACATTGAT-GCTTTGGTGTCGCAAGAG-AAGCTTGTCTTT-C
* * ** * * * * ** * * *
73113 C-TCATT-TTCCTTAGAATCAAAGTTTGTATTTTTAATTGAGACATGCATCG-ATTCTCGTA-AA
308 CACCGTTATT-GATAGAATCAAAG-TTGT-CTCTTAAATAAGACAAACAT-GAATACTCATACTA
* * * * * * * * * *
73174 AGTCTCCACTCTTTCCGAGATTAGG-ATCGAAAAACACT-TTC-CCTTCATTA-GGATAAATGAC
369 A-TCCCCATTCTTTTCTAGATTAGGCA-CCATAAACA-TAGTCTTCTT-A-TACGGATACATGAT
* * * * * * * **
73235 GTTGATGCTTTGG-TGCTGCAAGAGAAGCTTTTTTTTCCACC-GTTAAT
429 ATTGATGCTTTGGTTTC-GCAAGATACGC-TTTCTTCCCACCAATTTGT
* * * * * ** *** **
73282 GATAAAATCAAAG-T-TTGTCTCTTAAATAAGACAAACATGAACACTCA-TACTAATCCCCATTC
1 G-TAAATTCTAAGTTCTTG-C-CTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTCATTC
* * * * * * * * * * * * *
73344 TTTTCAAGATTAGGCACCATAAATATAGTCTTCTCTTAAGGATAAAGGATATTGATGATTTTGTT
62 ATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTT
* * * * * ** * ** *
73409 TCGCA-AGAAATGC-TTT-TTTCCCATCAATTTCTGTAAATTTTATGTTCGTGCCAC---AAATG
127 TTGCATGGAAAT-CTTTTCTTTGCC-TTATTTTCCATAAAATCAAAGTT--TG-CACTTTAAATG
** * * * * ** *
73468 AGACAAACATAGATTCTAGT-AAGGATCTTCATT-TATTTCGTGATTAGGGA-CAATAAACACAA
187 AGACATGCATTGATTCTCGTAAAAG-TCTCCATTCT-TTTCAAGATTAGGAACCAA-AAACAC-A
* * * ** * * * * * *
73530 TCTCCTTGTC---ACGATACATGATATTGATGGTTTTCTTTTGCATG-GAAATCTTTTCTTT--G
248 T-TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG-AAGCTTGTCTTTCCA
** * * * * ** *
73589 CC-TTATTTTCCTTAAAATCAAAGATTGTATTTTAAATGAGACATGCATTG-ATTCTTGCA-A--
310 CCGTTA--TT-GATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAATAC-T-CATACT
* * * * * * * * * *
73649 AAGTCTCCATTCGTTTT-AAGATTGGGAACCAAAAACACATTC-CCTTCATTA-GGATACCTGAC
368 AA-TCCCCATTC-TTTTCTAGATTAGGCACCATAAACATAGTCTTCTT-A-TACGGATACATGAT
* * * * * * *
73711 GTTGATGCTTTAGTGTCGCAAGAAAAGCTTGTCTTTCCACC-GTTAT-T
429 ATTGATGCTTTGGTTTCGCAAGATACGCTT-TCTTCCCACCAATT-TGT
* * * * * * * *** **
73758 GATAGAA-TCGAAGTTCGT-CTCTTAATTAAGACAAACATGAATACTCA-TACTAATCCACATTC
1 G-TA-AATTCTAAGTTCTTGC-CTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTCATTC
** * * * * * * * * * * **
73820 -TTTTTTGTATAAGGCACTGTAAACATAGTGTTCTCATAAGGATAAATGATATTGACGCTTTGGT
62 ATTTCATG-ATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCT
* * ** ** *
73884 TTTGCA-AGAAA-CACTTTC-TTGCCCCCAATTTT-TGTAAAGT-ATAAG-TT-CA-TTCCTCAA
126 TTTGCATGGAAATC-TTTTCTTTG--CCTTATTTTCCATAAAATCA-AAGTTTGCACTT--T-AA
* ** * * * * * ** * * * *
73941 ATTAGACAAACATGGATTCTAGT-AAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACAGA
184 ATGAGACATGCATTGATTCTCGTAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACA
* * * ** * * ** * * *
74005 CTCTCC--TCATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGTA-AATCTTTTCTTT--G
248 -T-TCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG-AGAAGCTTGTCTTTCCA
** * * * ** * * * *
74065 CC-TTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATAAGACATGCATTAATTCTCGTA-AAAG
310 CCGTTA--TT-GATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAA-
* * * * * * *
74128 TCTCCATTCTTTTCAAGATT-GAGAACCA-AAAGCAAATTCCTT-TCATTA-GGATACATGACAT
370 TCCCCATTCTTTTCTAGATTAG-GCACCATAAA-CATAGT-CTTCTTA-TACGGATACATGATAT
* * * * * *
74189 TGATACTTTGGTCTCGCAAGAGAAGCCTTTCTTTCCA-CGATTAT-T
431 TGATGCTTTGGTTTCGCAAGATACG-CTTTCTTCCCACCAATT-TGT
* * * * * * * *
74234 AATAGAA-TCAAAGTT-TAT-CTCTTAAATAAGACAAACATGAATACTCA-TACA-AATCTACAT
1 -GTA-AATTCTAAGTTCT-TGC-CTCAAATGAGACAAACATGGATTCT-AGTA-AGGATCTTCAT
** * * * * * * * * *
74294 TC-TTTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACCTGATAATGATGCTTTG
60 TCATTTCAT-GATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTT
** * * ** ** ** *
74358 GATTCGCA-AGAAATGCTTTT-TTCCCCCCAATTTT-TGTAATAT-ATAAG-TT-CA-TTCCTCA
124 CTTTTGCATGGAAAT-CTTTTCTT-TGCCTTATTTTCCATAAAATCA-AAGTTTGCACTT--T-A
** * * * * * * ** * ** *
74416 AATGAGACAAACATAGATTCTAGT-AAGGATCTTCTTTCATTTCGGGATTAGGCATTATAAACAC
183 AATGAGACATGCATTGATTCTCGTAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC
* * * * ** * * * * ** * *
74480 -TTTCTCCTCATTAGGATAAATGATATAAATGGGTTT-CTTTTGCCTG-GAAATCTTTTCTTTGC
247 ATTCCT-TTCATTAGGATACATGACATTGAT-GCTTTGGTGTCGCAAGAG-AAGCTTGTCTTT-C
* * ** * * * * ** * *
74542 C-TCATT-TTCCTTAGAATCAAAGTTTGTATTTTAATTGAGACATGCATTG-ATTC-CAATA-AA
308 CACCGTTATT-GATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAATACTC-ATACTA
* * * * * * * * * * *
74602 AGTCTCCACTATTTCCAAGATTA-GAATCCAAAAACACT-TTC-CCTTCATTA-GGATAAATGAC
369 A-TCCCCATTCTTTTCTAGATTAGGCA-CCATAAACA-TAGTCTTCTT-A-TACGGATACATGAT
* * * * * * * **
74663 ATTGATGCTTTGG-TGCTGTAAGAGAAGCTTTTTTTTCCACC-GTTAAT
429 ATTGATGCTTTGGTTTC-GCAAGATACGC-TTTCTTCCCACCAATTTGT
* * * * * ** *** ** *
74710 GATAAAATCAAAGTT-TAT--CT---TTAAGACAAACATGAACACTCA-TACTAATCCCCATTCT
1 G-TAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTCATTCA
* * * * * * * * * * *
74768 TTTCAGGATTAGGCACCATGAATATAGTCTTCC-CATAAGGATAAAGGATATTGATGATTTTGTT
63 TTTCATGATTAGGCACTATAAACACATTC-TCCTCATCAGGATACATGATATTGATGGTTTTCTT
* * * * * * ** * * *
74832 TCGTA-AGAAATGC-TTT-TTTCCCATCAATTTCTGTAAATTCTATGTTCGTGCCAC---AAATG
127 TTGCATGGAAAT-CTTTTCTTTGCC-TTATTTTCCATAAAATCAAAGTT--TG-CACTTTAAATG
** * * * * ** *
74891 AGACAAACATAGATTCTAGT-AAGGATCTTCATT-TATTTCGTGATTAGGGA-CAATAAACACAA
187 AGACATGCATTGATTCTCGTAAAAG-TCTCCATTCT-TTTCAAGATTAGGAACCAA-AAACAC-A
* * * * * * * * * * * *
74953 TCTCCCTGTC---ACGATACATGATATTGATGGTTTTAAGAT-TGGGAACCAAAAAC---ACATT
248 T-T-CCTTTCATTAGGATACATGACATTGAT-GCTTT--GGTGTCGCAA-GAGAAGCTTGTCTTT
* * * * * ** * **
75011 -C-CC-TTCATTAGGATA-CAT-GACGTTGATGCTTTGGTGTAGCAAGA-AAAGCTTGTCTTTCC
307 CCACCGTT-ATT--GATAGAATCAAAGTTG-T-CTCT--T-AAATAAGACAAA-CATG--AAT--
* ** * * * * * ** * *
75070 ACCGTTATTGA-TAGAATCAACGTT-TGTCTCTTA-A-AATG-A-GATAAACAT-GAATACTCAT
359 A-C-TCA-T-ACT--AATCCCCATTCT-TTTC-TAGATTAGGCACCATAAACATAGTCTTCTTAT
* * * ** * * * * * * *
75128 ---GCTA-ATGCATATT-CT-TTTCTGGATTAGGCACCGTAAAC-ATAGTCTTCTCA-TAA--GG
416 ACGGATACATG-ATATTGATGCTT-TGG-TTTCGCA-AG-ATACGCT-TTCTTCCCACCAATTTG
75183 AT
475 -T
** * * ** ** *** * * *
75185 ACAAGATAT-TGATGATT-TGGTTTCGCA--AG--AAACACTTTTTTCCCA-TCA--AT-TT-TT
1 GTAA-AT-TCT-AAG-TTCTTGCCTCAAATGAGACAAACA-TGGATT-CTAGTAAGGATCTTCAT
* * * * * ** * * *
75239 GTAAATTC-TAAGTTCGTGC-CTCAAATGAGACAAACATGGATTCT-AGTAAGGAT-CTTTATTC
60 -TCATTTCATGA-TTAG-GCACT---AT-A-A-ACACAT-TCTCCTCA-TCAGGATAC---A-TG
* * * * * * *
75300 ATTTCGTGATTAGGCATTGTAAACACATTCTCCT-CATTAGGATAAATGATATT-TATG-GTTTT
110 ATAT--TGA-T-GG--TT-T----TC-TT-T--TGCA-T-GG--AAAT-CTTTTCTTTGCCTTAT
*** *** * * ** * * *
75362 CTTTCGCATAGAAATC-TTTTCTATGC-CTTATTTTTCTTA-AAAT-CAAAGTTTGTACTTTAAA
155 -TTTC-CATA-AAATCAAAGT-T-TGCAC---TTTAAATGAGACATGCATTGATTCT-C-GTAAA
* ** * ** **
75423 AGGGACAAGCATT-TATTCTCGTAAAAGTCT-CCAATCCTTTCAAGATTGGGAACCAAAAACACA
210 A--GTC-TCCATTCT-TT-TC--AAGA-T-TAGGAA-CC--AAA---------------AACACA
* * * * * *
75486 TTCCTTTCATTAGGATACATGACATTGGTGCTTTGGTGTCACAAGAAAAGCTTTTCTATCTACCG
248 TTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCG
* * *
75551 TTATTGATAGAATCAAAGTTTGCCTTTTAAATAAGACAAATATGAATACTCATACTAATCCCCAT
313 TTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCAT
* * * * * *
75616 TCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTCT-TAAGGATGCAAGATATTGATCCTTTT
377 TCTTTTCTAGATTAGGCACCATAAACATAGTCTTCT-TATACGGATACATGATATTGATGCTTTG
* * * * *
75680 CTTTCACAAGAAACACTTTCTTCCCACCAATTTTT
441 GTTTCGCAAGATACGCTTTCTTCCCACCAATTTGT
* * * *
75715 GTAAATTCTAAGTCCGTGCCTTAAATGAGACAAACACGGATTCTAGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
** * * * * *
75780 TGTGATTAAGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTTATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* * * * * *
75845 ATGAAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTATTTTAATTGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * * **
75910 TTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTAGGATCCAAAAACACTTTCCCTTCATTTT
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* * * *
75975 GATAAATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTTTTTCCATCC-TTA---AT-G-A
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCA-CCGTTATTGATAGAA
*
76034 T---A----------AAAT----CAAACATGAATACTCGTACTAATCCCCATTCTTTTC-AGGAT
325 TCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-GAT
* * * * *
76081 TAGGCACCATAAACATAGTATTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAA
389 TAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
* * ** *
76146 TGCTTTTTTCCCATTAATTTCT
454 CGCTTTCTTCCCACCAATTTGT
* * * *
76168 CTAAATTCTATGTTCTTGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTTATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * * * *
76233 CGTGATTAGGGACAATAAACACAATCTCCTCGTCACGATACATGATATTGATGGTTTTCTTTTCC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* * *
76298 ATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * * * * *
76363 TTGTTTCTTGTAAAAGTTTCCATT-TGTTTTAAGATTGGGAACCAAAAACACATTCCCTTCACTA
196 TTGATTCTCGTAAAAGTCTCCATTCT-TTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* *
76427 GGATACATGACGTTGATGCTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTATTGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* *
76492 TCAAAGTTCGTCTCTTAATTAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCT-GTA
325 TCAAAGTT-GTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAG-A
* * * * * * *
76556 TAAGGCACCGTAAACATAGTGTTCTCATAAGGATAAATGATATTGATGCTTTGGTTTTGCAAGA-
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* * * *
76620 A-AC--ACTGCCC-CCAATTTTT
453 ACGCTTTCTTCCCACCAATTTGT
* * *
76639 GTAAAGTATAAGTTCATT-CCTCAAATTAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * * *
76703 TCGTGATTAGGCACTATAAACAGACTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTG
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* * * * * *
76768 TATGTAAATCTTTTCTTTGCCTTACTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* *
76833 ATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATT-GAGAACCAAAAACAAATTCCTTTCATT
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACATTCCTTTCATT
* * * * *
76897 TGGATACATGACATTGATACTTTGATCTCGCAAGAGAAGCCTT-TCTTTCCACCGTTATTAATAG
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG-CTTGTCTTTCCACCGTTATTGATAG
* * ** * *
76961 AATCAAAGTTTGTCTCTTAAATAAGACAAACATAAATACTCATACAAATCTACATTCTTTTTTGG
323 AATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAG
* * * * *
77026 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACCTGATAATGATGCTTTGGATTCGCAAGA
387 ATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * *
77091 AATGCTTTTTTCCCCCCAATTTTT
452 TACGCTTTCTTCCCACCAATTTGT
* * * *
77115 GT-AATATATGAGTTCATT-CCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCTTTCAT
1 GTAAAT-TCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCAT
** * * * * * *
77178 TTCGGGATTAGGCATTATAAACACCTTTCTCCTCATTAGGATAAATGATATTAATGGGTTTCTTT
64 TTCATGATTAGGCACTATAAACA-CATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTT
* * * * * * * * * *
77243 TACCTAGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCCAATTTTGTATTTTAATTGAGACAT
128 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACAT
* * * * * *
77308 GCATTGATTCTCGTAAAAGTGTCCACTCTTTCCAAGATTAGGATCCAAAAACACTTTCCCTTCAT
193 GCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCAT
* * * *
77373 TAGGATAAATGACATTGATGCTTTGGTG-CTGCAAGAGAAGCTTTTTTTTCCACCGTTAATGATA
258 TAGGATACATGACATTGATGCTTTGGTGTC-GCAAGAGAAGCTTGTCTTTCCACCGTTATTGATA
* * *
77437 AAATCAAAGTTTATCTCTTAAATAAGACAAACATGAACACTCATACTAATCCCCATTCTTTTC-A
322 GAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA
* * * * * * *
77501 GGATTAGGCACCATAAATATAGTCTTCTTATAAGGATAAAGGATATTGATGATTTTGTTTCACAA
386 -GATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * *
77566 GAAATGCTTTTTTCCCATCAATTT-T
450 GATACGCTTTCTTCCCACCAATTTGT
* * * * * * * *
77591 ATAAATTCTATGTTCGTGCCACAAATGAGACAATCATAGATTCTAGTATGGATCTTCATTTATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * ** * *
77656 CGTGATTAGGGACAATAAACACAATCTCCTTGTCACGATACTTGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* * *
77721 ATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * * * *
77786 TTGATTCTTGCAAAAG------------T-AAGATTGGGATCCAAAATCACATTCCCTTCATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* *
77838 GATACATGACGTTGATGCTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTATTGATAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
* * * * * ** *
77903 CAACGTTTGTCTCTTAAAATGAGATAAACATGAATACTCATGCTAATGCATATTCTTTT-TCGGA
326 CAAAG-TTGTCTCTT-AAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCT-AGA
* * * * *
77967 TTAGGCACCGTAAACATAGTCTTCTCATAAGGATAAATGATATTGATGCTTTGGTTTCGCAAGAA
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
*
78032 ACGCTTTCTTGCCC-CCAATTTTT
453 ACGCTTTCTT-CCCACCAATTTGT
*** * * * *
78055 GTAAAGAATAAGTTCATT-CCTAAAATTAGACAAACATGAATTCTAGCAAGGATCTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * * * ** *
78119 TCGTGGTTAGACACTGTAAACGCATTCTCCTCATTGGGATAAATGATATTGATGGTTTTCTTTTG
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
** * * * * ** *
78184 CATTAAAATCTTTTCTTTGCCTCA-TTTCC-TTAGATAAAAGTTTGTGCTCTAAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* * * * * * * *
78247 TTTGATTCTCATAAAAGTCTCCATTCTTTCCAAGACTGGGATCTC-AAAGCACATTCCCTTCATT
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAAC-CAAAAACACATTCCTTTCATT
* * * * * * * * * * *
78311 AGGATACATGACACTGATGCTTTGCTCTCACAAGAAAAGCTTTTCTTCCCATCGTTAATGAGAAA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* * *
78376 ATCAAAGTTTGTCACTTAAAT-A-AC--ACATGAATACTCATACTAATCCTCATTCTTTTCAAGA
324 ATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
* * * * * * * *
78437 TTAGGCACCGTAAACATAGTCTTCTCATAAGGATACAGGATATTAATGATTTGATTTCGCAAGAA
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* * * *
78502 ACGTTTTTTTCCCATCAATTTTT
453 ACGCTTTCTTCCCACCAATTTGT
* * * *
78525 TTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAATAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * * * *
78590 CGTTATTAGGCACTATAAGCACATTCTCCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGA
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* * * * *
78655 AT-GAAA----ATCTATACCTTATTTTCCTTAAAATCAAAGTTTGTACTTT--A--A-A-ATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* ** *
78709 TTGATTCTCGCAAAAGTCTCC-TATCTTTTCGTGATTGGGAACCAAAAACACATTCCTTTCATTA
196 TTGATTCTCGTAAAAGTCTCCAT-TCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* * * * *
78773 GGATACATGACATTGATGCTTTGGGGTCGCGAGAGAAGCTTTTCTCTCTACCGTTATTGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* * * * * *
78838 TCAAAGTTTGCCTTTTATATAAGACAAACATGAATACTCATACTAATCCCTATTCTTTTCCAGGT
325 TCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGAT
* * * * *
78903 TAGGCACCATAAACATAGTCTTCTCATGA-GGATACAAGATATTGATGCTTTGCTTTCGCAATAA
389 TAGGCACCATAAACATAGTCTTCTTAT-ACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* * *
78967 ACGCTTTTTTCCCATCAATTTTT
453 ACGCTTTCTTCCCACCAATTTGT
* *
78990 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTTATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * * *
79055 CGTGATTAGGCATTGTAAACACATTCTCCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* * * ** * *
79120 ATAGAAATCTTTTCTTTGCCTTATTTTTCTTAAAATCAAAGTTTGTTCTTTAAAAGAGACAAGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * *
79185 TTGATTCTCATAAAAGTCTCCAATCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* * * *
79250 GATACATGACATTGGTGCTTTGGTGTCGCAAGAGAAGCTTTTCTCTCTACCGTTATTGATAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
* * * * * *
79315 CAAAGTTTGCCTTTTATATAAGACAAACATGAATACTCATACTAATCCCTATTCTTTTCCAGGTT
326 CAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATT
* * * * * *
79380 AGGCACCATAAACATAGTCTTCTCATAAGGATACAAGATATTGATGCTTTGCTTTCACAAGAAAC
390 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATAC
* *
79445 ACTTTCTTCCCACCAATTTTT
455 GCTTTCTTCCCACCAATTTGT
79466 GTAAATTCTAAGTT-TGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
1 GTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * *
79530 TCATGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGGTTTTCTTTTG
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* * *
79595 CATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* * * * * *
79660 ACTGATTCTCATAAAAGTCTCCATTCTTTTTAAG--TATGGGACCAAAAACATATTCCCTTCATT
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTA-GGAACCAAAAACACATTCCTTTCATT
* * * * * * *
79723 AGAATACATGACATTGATGCTTTTGTGTTGCAAGAGAAGCTTTTCTTTCTACCGTTAATGATAAA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* * ** *
79788 ATCAAAATTTGTC-CCT---TAAGGGAAACATGAATACTCATACTAGTCCCCATTCTTTT-TAGG
324 ATC-AAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-G
* * * * * * *
79848 ATTAGGCACCCTAAACATAGTCTTCTCATACGGATACAAGAGAATGATGATTTAGTTTCGCAAGA
387 ATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * *
79913 AACACTTTTTTCCGACCAATTTTT
452 TACGCTTTCTTCCCACCAATTTGT
* * *
79937 GTAAATTCCAAGTTCGTGCCTCAAATGAGACAAACATGGATTCCAGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * * *
80002 CGTGATTAGGCGCTATAAACACATTCTACTCATTAGGATAAATGATATTTATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* *
80067 ATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGCACCTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * * *
80132 TTGATTCTCATAAAATTGTCCTTTCTTTTCAAGATTGGGAACCAAAAACACATT-CTCTTCATTA
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCT-TTCATTA
* *
80196 GGATACATGACATTAATGCTTTGGTGTCGCAAGAGAAGC-TGCTCTTTCCACCGTTATTTATAGA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTG-TCTTTCCACCGTTATTGATAGA
* * * * ** *
80260 ATCAAAGTTTGTCTCTTAAACAAGACAAACTTGAATAGTCATACCAATCCATATTCTTTTCTATA
324 ATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
** * * * *
80325 TTACACACCACCAGAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGTAA
388 TT--A-GGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAA
* * *
80390 GAAACGCTCTCTTCCCACCAATTTTT
450 GATACGCTTTCTTCCCACCAATTTGT
* * * * * * *
80416 GTAAAGTATACGTTCATT-CTTCAAATCAGACAAACATGGATTCTAGTAGGGATCTTTATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
** * * * * *
80480 TCATGATTAGGCACTATAAATGCATTCTCCCCGTTAGGATAAATGATATTGATGGTTTTCTTTTA
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* * * * * * *
80545 CCT-GAAATCTTTTATTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGC
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGC
* * * * *
80609 ATCGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTAGGAACC--AAACACA-TCCTCCTCACT
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCT-TTCATT
* * * *
80671 AGGATACTTGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC-CCTGCTAATGATA-
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACC-GTTATTGATAG
* * * **
80734 AGATCAAAGTTTGTCTCTTAAATAACACAAACATGAATAGTCATACTAATACCCATTCTTTTCCG
323 A-ATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA
* * * * *
80799 GATTTGGCACCATAAACATAGACTTCTCATAAGGATACATGATATTGATGCTTTGCTTTCGCAAG
386 GATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAG
* **
80864 AAAAACTTTCTTCCCACCAAATTT-T
451 ATACGCTTTCTTCCCACC-AATTTGT
* * * *
80889 GTAAATTCTAAGTTCGTGCCTCAAATGAGGCAAACATGGATTCTAGTATGGATCTTCGTTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * *
80954 CGTGATTAGGCACTATAAACACTTTCTCCTTATTAGGATAAATGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* * *
81019 ATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * *
81084 TTGATTCTCATAAAAGTCTCCATTCTTTCCAAGATT-GAGAACCAAAAACACATTCCCTTCATTA
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG-GAACCAAAAACACATTCCTTTCATTA
* * * * * * * *
81148 GAATACATGAAATTGATGCTTTTGTGTTGCAAGAGAAGCTTTTCTTTCTACCGTTAATGATAAAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* * * * *
81213 TCAAAATTTGTC-CCT---TAAGAGAAACACGAAAACTCATACTAATCCCCATTCTTTT-TAGGA
325 TC-AAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-GA
* * * * * * * * * * *
81273 TTAGGCACCCTAAACATAGTCTTCTCATATGGATGCAAGAGAATGTTGATTTAGTTTCGCAAGAA
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* * *
81338 ACGTTTTTTTCCCACCAATTTTT
453 ACGCTTTCTTCCCACCAATTTGT
*
81361 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
** * * * * * *
81426 CGCGATTATGCACTATAAACACATTCTCTTCATTAGGATAAATGATAATAATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* *
81491 ATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGCACCTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * * *
81556 TTGATTCTCATAAAATTGTCCTTTCTTTTCAAGATTGGGAACCAAAAACACATT-CTCTTCATTA
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCT-TTCATTA
* * *
81620 GGATACATGACATTAATGCTTTGGTGTCGCAAGAGAAGC-TGTTCTTTCCACTGTTATTTATAGA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTG-TCTTTCCACCGTTATTGATAGA
* * * * ** *
81684 ATCAAAGTTTTTCTCTTAAATAAGACAAACTTGAATAGTCATACCAATCCATATTCTTTTCTATA
324 ATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
** * * * * *
81749 TTACACACCAGAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGTAAGAA
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* *
81814 ACGCTCTCTTCCCACCAATTTTT
453 ACGCTTTCTTCCCACCAATTTGT
* * * * * * *
81837 GTAAAGTATACGTTCATT-CTTCAAATCAGACAAACATGGATTCTAGTAGGGATCTTTATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * * * *
81901 TCATGATTAGGCACTATAAACGCATTCTCCCCGTTAGGATAAATGATATTGATGGTTTTCTTTTA
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* * * * * * * *
81966 CCT--ACAATCTTTTATTTGCCTCACTTTCCTTAAAATCATAGTTTGTACTTTAAATGAGACAAG
130 CATGGA-AATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
* *
82029 CATCGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTAGGAACC--AAACACATT-CTCTTCAT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCT-TTCAT
* ** * *
82091 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACTATTAATGATAA
258 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAG
*
82156 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATACCCATTCTTTTC-AG
323 AATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-
* * * * * *
82220 GATTAGGCACCATAAAAATAGTCTTCTCATAAGGATAC-TGGATATTAATGATTTGGTTTTGCAA
386 GATTAGGCACCATAAACATAGTCTTCTTATACGGATACAT-GATATTGATGCTTTGGTTTCGCAA
* * * * *
82284 GAAACGGTTTTTTCTCACCAATTTTT
450 GATACGCTTTCTTCCCACCAATTTGT
* * * * ** * *
82310 GCAAATTCTAAGTTCGTGCCTCAAATAAAACAAACATAAATTCTAGTGAGGATCTTTATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * *
82375 CGTGACTAGGCACTATAAATACATTCTCCTCATTAGGATACATGATATTGATGATTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* * * * *
82440 GTGAAAATCTTTTCTTTGCCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * *
82505 TTAATTC-CTGTAAAAGTCTCCATTCTTTTTAAGATTGGGAACCAAAAACACATTCCTTTCATTA
196 TTGATTCTC-GTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* *
82569 GGATACAAGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCATCGTTATTGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* * * * * *
82634 TCAAAGTTTATCTCTTAAATAAAATAAACATGAATACTCATACTAATCCACAATCTTTTGTAGAT
325 TCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGAT
* * * * * *
82699 TAGGCACCATAAAAATAGTCTTCTCATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAA
389 TAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATA
* *
82764 CGCTTTTTTCCCACCAATTTTT
454 CGCTTTCTTCCCACCAATTTGT
* * * *
82786 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAGACATGGATTCTAGCAACGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * *
82851 CGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATACATGATATTGATGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
** * *
82916 ATGGAAATCTTTTCTTTGCCTTATTTTCTTTAAAATCAAAGTTTGTACATTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * * * *
82981 TTGATTCTCGTAAAAGTCTCCACTATTTCCAAGATTAGGATCCAAAAACACTTTCCCTTCATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
*
83046 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCATCGTTATTGATAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
* * * ** *
83111 CAAAGTTTATCTCTTAAATAAAATAAACATGAATACTCATACTAATCCATATTCTTTTGTAGATT
326 CAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATT
* * * * * *
83176 AGGCACCATAAAAATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAAC
390 AGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATAC
* *
83241 GCTTTTTTCCCACCAATTTTT
455 GCTTTCTTCCCACCAATTTGT
* * * * *
83262 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAGACATGGATTCTAGCAAGGATCATCATTTATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * *
83327 CGTGATTAGGCACTATAAACACATTCTCCTTATTAGGACACATGATATTGACGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* *
83392 ATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * *
83457 CTGATTCTCGTAAAAGTCTCCATT-TTTTCCAAGATTGGGAACCAAAAACACATTACC-TTCATA
196 TTGATTCTCGTAAAAGTCTCCATTCTTTT-CAAGATTAGGAACCAAAAACACATT-CCTTTCATT
* * * * *
83520 AGGATACATGACATTGATGCTTTGGTGTCGCAGGAGAAGCTTTTCTTTCCAACATTATTGATAAA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* ** * *
83585 ATCAAAGTTTGCCTC-T---T---------A--AATACTCATACTAATCCATATTCCTTTCAAGA
324 ATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
* * * * * * *
83635 TTAGGCACCATAAACACAGTCTTCTCATACGGATATAGGATATTGATGATTTGGTTTAGCAAGAA
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
** *
83700 ATACTTTTTTCCCACCAATGTT-T
453 ACGCTTTCTTCCCACCAAT-TTGT
* * * * * *
83723 ATAAATTCTAAGTTCTTGCCTTAAATGAGATAGACATGCATTCTAGTAATGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * * *
83788 CGTGATTAGGCACTCTAAACACATTCTCCTCATTAGGATACAAGGTATTGAGGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* * *
83853 TTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* * * *
83918 TTGGTTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAGCACATTACC-TTCATTA
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-CCTTTCATTA
* * * *
83982 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACATTATTGATAAAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* ** * * *
84047 TCAAAGTTTGCCTCTTAAATAA-AGCAAGTATGAATACTCATACTAATCCACATTCCTTTCGAGA
325 TCAAAG-TTGTCTCTTAAATAAGA-CAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
* * * * *
84111 ATAGGCACCATAAACATAGTCTTCTTCTCAAACGGATATAGGATATTGATGATTTGGTTTCGCAA
388 TTAGGCACCATAAACATAGTCTTC-T-T-ATACGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * *
84176 GAAATGCTTTTTTCCCACCAATTTTT
450 GATACGCTTTCTTCCCACCAATTTGT
* * * * * * * *
84202 ATAAATTCAAAGTTCTTGCCTTAAATGAGATAGACAAGGATTTTAGTAACGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* * * * * * **
84267 CGTGATTAGGCACTGTAAACACATTCTCCTTATTAGGATACAAGGTATTGGGGGTTTTCTTTTGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* *
84332 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAATATCAAAGTTTGTACTTTAAAT-ACGACATGC
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGA-GACATGC
* *
84396 ATTGATTCTTGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTA
195 ATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTA
* *
84461 GGATACATGACATTGATGCTTTGGTGTTGCAAGAGCAGCTTGTCTTTCCACCGTTATTGATAGAA
260 GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAA
* * *** *
84526 TCAAAGTTTGTCTCTTGAATATGACAAACATGAATACTCATACTAATTTACATTCTTTTCTTGAT
325 TCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGAT
* * * * * * * * * *
84591 TAGGCACCGTCAAA-ATACTCTTCTCATAAGGATACAGGAAATGGACGATTCGGCTTT-GCAAGA
389 TAGGCACCAT-AAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGG-TTTCGCAAGA
* * *
84654 -ACTACTTTTTTCCCACCAATTTTT
452 TAC-GCTTTCTTCCCACCAATTTGT
* * * * *
84678 GTAAATTCTAAGTT-TGTGCCTCGAATGATACAAACATAGATTCTAGTATGGATCTTCATACATT
1 GTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
*
84742 TCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTTTTCTTTTG
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* *
84807 CATGGAAATCTTTTCTTTGCCTTATTTTCC-TCAAAATCAAAGTTTGTACTTTAAATGAGAAATG
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCAT-AAAATCAAAGTTTGCACTTTAAATGAGACATG
* * * * *
84871 CATTGATTTTGGTAAAAGTCTCCATTCTTTTTAAGATTAGGAACCAAACACTCATTCCTTTCATT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
*
84936 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCATTATTGATAGA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* * * * * * * *
85001 ATCAAAATTTGACTCTTTAATAAGACAAACATGAATACTCACAATAATCCACATTCTTTTTTGGA
324 ATC-AAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGA
* * * * * *
85066 TTAGGCACCATAAACATCGTTTTCTCATAAGGATAAATGATATTGATGCTTTGGTTTCGCAAGAA
388 TTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAT
* * *
85131 ACACTTCCTTCCCACCAATTTTT
453 ACGCTTTCTTCCCACCAATTTGT
* * * * * * *
85154 GTAAAGTATAAGTTCGTT-CGTCAAATTAGACAAACGTGAATTCTAGTGAGGATCTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * * * *
85218 TCATGGTTAGACACTATAAACGCATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTCTG
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
** * * *
85283 CATTAAAATCTTTTCTTTGCCTCA-TTTCC-TTAGATCAAAGCTTATG--CTTTAAATGAGACAT
130 CATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAG-TT-TGCACTTTAAATGAGACAT
* * * * * * * * * *
85344 GCATTTATTCTCATAAATGTCTCCATTCTTTCCATGATTGGGATCCTAAAGCACATTCCGTTCAT
193 GCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCAT
* * * * * *
85409 TAGGATACATGACATTGATGCTTTGGTTTCACAAGAGAAGCTTTTCTTTCCACCATTAATGATAA
258 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAG
* *
85474 AATAAAAGTTTGTCACTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTC-AG
323 AATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-
* * *** * * * * *
85538 GATTAAGAATTGTAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAG
386 GATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * *
85603 AAACGTTTTTTTCCTAACAATTTTT
451 ATACGCTTTCTTCCCACCAATTTGT
* * * * *
85628 GTAAATTCCATGTTCGTGCCTCAAATGAAACAAACAAGGATTCTAGTAAGGATCTTCATTCATTT
1 GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
** * * * * *
85693 TGTGGTTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTTATGGTTTTCTTTGGC
66 CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
* * * * * *
85758 TTGAAAATATTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACTTGCA
131 ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
* *
85823 TTGATTCTCGTAAAAGTCTCCAATCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAG
196 TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
* * * * * *
85888 GATACATGATATTGATGCTTGGGGGTCGCAAGAGAAGCTTTTCTTTCTACCGTTATGGATAGAAT
261 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
* * * *
85953 CAAATTTTGTCACTTAAATAAGACAAACATGAATACTCATACAAATCCCCATTCTTTTC-AGGAA
326 CAAA-GTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-GAT
* * *
86017 TAGGCACCATAAACATAGTCTTCTCATAAGGCTTATATACATGATATTGATGCTTTGGTTTTGCA
389 TAGGCACCATAAACATAGTCTTCTTATACGG-----ATACATGATATTGATGCTTTGGTTTCGCA
* * *
86082 AGAAACACTTTCTTCCCACCAATTTTT
449 AGATACGCTTTCTTCCCACCAATTTGT
* * *
86109 GTAAATTCTAAATGT-GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCCTTCATT
1 GTAAATTCTAAGT-TCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * *
86173 TCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAACGATATTGATGGTTTTCTTTTG
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTG
* ** *
86238 CATGGAAATCTTTTCTTTGCCATAGTTTT-TTTAAAATCAAAGTTTGTACTTTAAATGAGACATG
130 CATGGAAATCTTTTCTTTGCCTTA-TTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
* * * *
86302 CATTGATTCTCGTAAAAGTCTCCACTC-TTTCTAAGATTAGGATCCAAAAACACTTTCCCTTCAT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTC-AAGATTAGGAACCAAAAACACATTCCTTTCAT
* * * * * * * *
86366 TAGGACACATGACACTGATGCTTTTGTGTCGTAAAAGAAGCTTTTCTTTCCACCGTTAATGATAA
258 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAG
* * * *
86431 AATCAAAGTTTATCTCTTAAATAAGACAACCATGAATACTCATACCAATCCCCATTCTGTTC-AG
323 AATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-
* * * * * * * *
86495 GATTAGGCACCGTAAACACAGTCTTCTCAAAAGGATACAGGACATTGATGATTTGGTTTCGCAAG
386 GATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAG
** * *
86560 -TAACATTTTTTTCCCATCAATTT-T
451 AT-ACGCTTTCTTCCCACCAATTTGT
* * * * *
86584 CATAAATTCTATGTTCATGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTAATT
1 -GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * ** * * *
86649 TCGTGATTAGGCACTACAAGCACATTCTCCTCATTTGGATAAATGATATTTATGGCTTTT-TTTA
65 TCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGG-TTTTCTTTT
** * * * * * *
86713 AAATGGAAATCGTTTCTTTGCCTTATTTTCCTTAAAATGAAAATTTGTACTTTAAATGAGACAAG
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
* * * *
86778 CATTGATTCTTGTAAAAGTCTCCAATCTTTTCAAGACTGGGAACCAAAAACACATTCCTTTCATT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATT
* * * * * * * *
86843 AGGATACATGACATTGATCCTTTGGGGTGGCAAGAGAAGATTTTCTTTCTACCATTATGGATAGA
259 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGA
* *
86908 ATCAAAGTTTGTCAT-TTAAATAAGATAAACATGAATACTCATACTAATTCCCATTCTTTTC-AG
324 ATCAAAG-TTGTC-TCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTA-
* * * *
86971 GATTAGGCACCATAAACATAGTCTTCTCATAAGGACAAATGATATTGATGCTTTGGTTTCGCAAG
386 GATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * *
87036 AAACGCTTTCTTCCCCCCAATTTTT
451 ATACGCTTTCTTCCCACCAATTTGT
* * * *
87061 GTAAAGTATAAGTTCATT-CCTCAAATTAGAAAAACATGGATTCTAGTAAGGATCTTCATTCATT
1 GTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
* * * * * * *
87125 TCGTGATTCGACACTATAAACAGATTCTCCT-ATTAAGGAAAAATGATATTGATGGTTTTCTTTT
65 TCATGATTAGGCACTATAAACACATTCTCCTCA-TCAGGATACATGATATTGATGGTTTTCTTTT
* * * *
87189 GCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACTTG
129 GCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATG
* * * *
87254 CATTGATTCTCGTAAAAGTCTCCACTC-TTTCTAAGATTAGGATCCAAAAACACTTTCCCTTCAT
194 CATTGATTCTCGTAAAAGTCTCCATTCTTTTC-AAGATTAGGAACCAAAAACACATTCCTTTCAT
* * * * * * * *
87318 TAGGACACATGACATTGATGCTTTTGTGTCGTAAAAGAAGCTTTTCTTTCCATCGTTAATGATAA
258 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAG
* * * * * * *
87383 AATTAAAGTTTATCTCTTAAATAAGACAAACATTAATACTGATACTAATCACCATTATTTTCAAG
323 AATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAG
* * * *
87448 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTG
387 ATTAGGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTG
87502 TGTGAGCTCA
Statistics
Matches: 43053, Mismatches: 6519, Indels: 4821
0.79 0.12 0.09
Matches are distributed among these distances:
444 2 0.00
445 10 0.00
446 5 0.00
447 99 0.00
448 351 0.01
449 18 0.00
450 6 0.00
451 16 0.00
452 11 0.00
453 379 0.01
454 8 0.00
455 3 0.00
456 4 0.00
457 10 0.00
458 3 0.00
459 10 0.00
460 5 0.00
461 560 0.01
462 177 0.00
463 134 0.00
464 144 0.00
465 442 0.01
466 21 0.00
467 28 0.00
468 23 0.00
469 179 0.00
470 613 0.01
471 1787 0.04
472 1340 0.03
473 2150 0.05
474 3458 0.08
475 12141 0.28
476 10953 0.25
477 2838 0.07
478 851 0.02
479 1095 0.03
480 149 0.00
481 697 0.02
482 48 0.00
483 54 0.00
484 41 0.00
485 41 0.00
486 42 0.00
487 18 0.00
488 16 0.00
489 40 0.00
490 41 0.00
491 22 0.00
492 25 0.00
493 30 0.00
494 21 0.00
495 35 0.00
496 27 0.00
497 16 0.00
498 40 0.00
499 32 0.00
500 13 0.00
501 25 0.00
502 10 0.00
503 32 0.00
504 39 0.00
505 53 0.00
506 58 0.00
507 46 0.00
508 45 0.00
509 24 0.00
510 29 0.00
511 33 0.00
512 40 0.00
513 31 0.00
514 11 0.00
515 22 0.00
516 16 0.00
517 17 0.00
518 26 0.00
519 22 0.00
520 35 0.00
521 49 0.00
522 39 0.00
523 33 0.00
524 31 0.00
525 26 0.00
526 24 0.00
527 36 0.00
528 53 0.00
529 36 0.00
530 38 0.00
531 33 0.00
532 30 0.00
533 38 0.00
534 57 0.00
535 31 0.00
536 26 0.00
537 26 0.00
538 286 0.01
539 20 0.00
540 11 0.00
541 17 0.00
542 1 0.00
543 2 0.00
545 5 0.00
546 8 0.00
547 3 0.00
548 13 0.00
549 11 0.00
550 22 0.00
551 30 0.00
552 16 0.00
553 19 0.00
554 9 0.00
555 9 0.00
556 8 0.00
557 6 0.00
558 10 0.00
559 3 0.00
560 2 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.36
Consensus pattern (475 bp):
GTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
CATGATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTCTTTTGC
ATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGCACTTTAAATGAGACATGCA
TTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTTTCATTAG
GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAAT
CAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCTAGATTA
GGCACCATAAACATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACG
CTTTCTTCCCACCAATTTGT
Found at i:41739 original size:158 final size:154
Alignment explanation
Indices: 34624--44079 Score: 1973
Period size: 158 Copynumber: 59.6 Consensus size: 154
34614 GTAACAGTCC
* * * * * * *
34624 CCATTCTTTTCAAGATTAGGAACGAAAAACACATTCCTT-TCATTAGTATACATGACATTGACGC
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATT-CTTCTTATAAG-ATACATGATATTGATGC
* * * * * *
34688 TTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACC--TTTATTAATGGAATCAAAGTT-TGTCTTTT
64 TTTGGTTTCGCAAGAAACGCTT-TC-TTCCCCCAATTT-TT-GT-AAATCAAAGTTGT-TC-CTT
* * *
34750 AAATAAGACAAACATGAATACCCATACTAATC-
122 AAATGAGACAAACATGAATTCTCATACTAATCT
* * * * * * * *
34782 CACATTCTTTTCCAGATTAGGCCCCAAAAACATAGTCTTCTCATAAGGATACAAGATATTTATGC
1 C-CATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAA-GATACATGATATTGATGC
* * * * * * * *
34847 TTTGGTTTCGCAATAAATGCTTTCTTCCCTCTAACTTTTGTAAAGT-ATCACTTCATTCCTCAAA
64 TTTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCA-AAGTT-GTTCCTTAAA
* * *
34911 TTAGACAAACATGGATTCTGGCA-AC-GATCT
125 TGAGACAAACATGAATTCT--CATACTAATCT
* * ** * * * * * * *
34941 TCATTCATTTCGTGATTAAGG-ACTATAAACACATTCTCCTCATTAGGATAAATGGTATTGATGG
1 CCATTCTTTTCAAGATT-AGGCACCATAAACACATTCTTCTTA-TAAGATACATGATATTGATGC
** * * * ** ** * * * * *
35005 TTTTCTTTTGCATCGAAATC-TTTTCTTTGCCTTATTTTAGTAAATTCTAAGTTCGTACCTCAAG
64 TTTGGTTTCGCA-AGAAA-CGCTTTCTTCCCCCAATTTTTGTAAA-TCAAAGTT-GTTCCTTAAA
* ** * *
35069 TGAAACAAATTTGGATTCT-AGTA-AAGATCT
125 TGAGACAAACATGAATTCTCA-TACTA-ATCT
* * * * * ** * * *
35099 TCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCGTCAGGATGCATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTAT-AAGATACATGATATTGATGCT
** * * ** ** ** * *
35164 TTTCTTTTGCATGAAAATCTTTTCTT-TGCCTTTTTTTCCATAAAATCAAAGTT-TGCACTTTAA
65 TTGGTTTCGCAAGAAACGC-TTTCTTCCCCCAATTTTT--GT-AAATCAAAGTTGTTC-C-TTAA
** * *
35227 ATGAGACATGCATTG-ATTCTCGTAAC-AGTCT
124 ATGAGACAAACA-TGAATTCTCAT-ACTAATCT
* * * * * **
35258 CCATTCTTTACAAGATTAGGAACCAAAAACACACTCTT-TTCATTAGGATACATGGCATTGATGC
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTT-A-TAAGATACATGATATTGATGC
* * *
35322 TTTGGTGTT-GCAAGAGAA-GCTTGTCTTTCCGCC-GTTATTGATAGAATCAAAGTTGTGT-CTT
64 TTTGGT-TTCGCAAGA-AACGCTT-TC-TTCCCCCAATTTTTG-TA-AATCAAAGTTGT-TCCTT
* * *
35383 AAATAAGACAAACATGAATACTCATACTAATCC
122 AAATGAGACAAACATGAATTCTCATACTAATCT
* * * ** * *
35416 CCATTGTTTTCTAGGTTAGGCACCATAAACTTAGTCTTCTTATACGTATACATGATATTGATGCT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAAG-ATACATGATATTGATGCT
* * * * * *
35481 TTAGTTTCGCAAGATACGCTTT-TGTCCCACCAATTTGTGTAAATTCTAAGTTCGTGCCTCAAAT
65 TTGGTTTCGCAAGAAACGCTTTCT-TCCC-CCAATTTTTGTAAA-TCAAAGTT-GTTCCTTAAAT
* ***
35545 GAGACAAACATGGATTCT-AGTAAGGATCT
126 GAGACAAACATGAATTCTCA-TACTAATCT
* * * * * * * * *
35574 TCATTCATTTCATGATTAGGCACTATAAACAC--TC-CCTCATCAGGATGCATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTAT-AAGATACATGATATTGATGCT
** * * * ** ** ** *
35636 TTTCTTTTGCATGGAAATC-TTTTCTTTGCCTTATTTTCCATAAAATCAAACTT-TTCACATTAA
65 TTGGTTTCGCA-AGAAA-CGCTTTCTTCCCCCAATTTT-TGT-AAATCAAAGTTGTTC-C-TTAA
** * * * * * *
35699 ATGAGACATGCGTTAATTCTCGTAATAGTCC
124 ATGAGACAAACATGAATTCTCATACTAATCT
* ** * * * * *
35730 CCATTCTTTTCAAGATTAGGAATGAAAAACACATTTCTT-TCATTAGGATAAATGACATTGATGC
1 CCATTCTTTTCAAGATTAGGCACCATAAACACA-TTCTTCTTA-TAAGATACATGATATTGATGC
* * * * ** * *
35794 TATGGTGTCGTAAGAGAA-GCTTGTCTTTCCACC-GCTATTGATAGAATCAAAGTTG-TCTTTTA
64 TTTGGTTTCGCAAGA-AACGCTT-TC-TTCCCCCAATTTTTG-TA-AATCAAAGTTGTTC-CTTA
* * *
35856 AATAAGACAAACATGAATACTCATACTAATCC
123 AATGAGACAAACATGAATTCTCATACTAATCT
* * * * * * *
35888 CCATTCTTTTTAGGATTTGGCACCATAAACATAGTCTTCTTATAAGGATACACGATAATGATGCT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAA-GATACATGATATTGATGCT
* * * * * * * *
35953 TTGGTTTCGCAAGATACACTTTCTTCCCACCAATTTGTGTAAAGCATGAGTTCATTGCTCAAATG
65 TTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAATCA-AAGTT-GTTCCTTAAATG
* ** ***
36018 AGACAAACATGGATTCTTGTAGGGATCT
127 AGACAAACATGAATTCTCATACTAATCT
* * ** * * * * *
36046 TCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCGCTT-TAGGATAAATGATATTGATGG
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCT--TCTTATAAGATACATGATATTGATGC
** * * ** ** ** * * *
36110 TTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCATG-AAATCAAACTTTGTACTTTAA
64 TTTGGTTTCGCAAGAAACGC-TTTCTTCCCCCAATTTT---TGTAAATCAAA-GTTGTTCCTTAA
** ** *
36174 ATGAGACATGCATTG-ATTCTCGCA-AAAGTCT
124 ATGAGACAAACA-TGAATTCTCATACTAA-TCT
* * * * * * *
36205 CCATTCTTTTCAAGATT-GTGAACCAAAAATACATTC-CCTTCATTAGGATACATGACATTGACG
1 CCATTCTTTTCAAGATTAG-GCACCATAAACACATTCTTCTT-A-TAAGATACATGATATTGATG
* * * * * *
36268 CTTTGGTGTGGCAAGAAAAGCTTTTCTT--TCCAACGTTATTGATAAAATCAAAGTT-TGCCTCT
63 CTTTGGTTTCGCAAGAAACGC-TTTCTTCCCCCAA--TTTTTG-T-AAATCAAAGTTGT-TC-CT
* * *
36330 TAAATAAGACAAACATGAATACTCATACTAATCC
121 TAAATGAGACAAACATGAATTCTCATACTAATCT
* * * * * *
36364 CCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATATAGGATATTGATGAT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAA-GATACATGATATTGATGCT
* * * * * * * *
36429 TTGGTTTTGCAAGAAACACTTTTTTCCCATCAATTTTTGTAAATTCTAAGTTCATACCTCAAATG
65 TTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCAAAGTT-GTTCCTTAAATG
* ** *
36494 AGACAAACATGGATTCTGGTA-AAGATCT
127 AGACAAACATGAATTCTCATACTA-ATCT
* *** * * * * * *
36522 TCGCCCATTTCATGATTAGGCACTATAAACACAATT-TTCCTCATCAAGATGCATGATAGTGATG
1 CCATTCTTTTCAAGATTAGGCACCATAAACAC-ATTCTT-CTTAT-AAGATACATGATATTGATG
* ** * * * ** ** * *
36586 GTTTTCTTTTGCATGGAAATC-TTTTCTTTGCCTTATTTTCCT-TCAAATCAAAGTTTGTACTTT
63 CTTTGGTTTCGCA-AGAAA-CGCTTTCTTCCCCCAATTTT--TGT-AAATCAAAG-TTGTTCCTT
**
36649 AAATGAGACATGCATTG-ATTCTCATA--AAGGTCT
122 AAATGAGACAAACA-TGAATTCTCATACTAA--TCT
* * * * * *
36682 CCACTCTTTTCAAGATT-GTGAACCAAAAACACATTC-CCTTCATTAGAATACATGACATTGATG
1 CCATTCTTTTCAAGATTAG-GCACCATAAACACATTCTTCTT-ATAAG-ATACATGATATTGATG
* * * *
36745 CTTTAGG-GTCGCAAGAGAA-GCTTTTCTT--TCCAACGTTATTGATAAAATCAAAGTT-TACCT
63 CTTT-GGTTTCGCAAGA-AACGC-TTTCTTCCCCCAA--TTTTTG-T-AAATCAAAGTTGTTCCT
* * *
36805 CCTAAATGAGGCAAACTTGAATGCTCATACTAATC-
121 --TAAATGAGACAAACATGAATTCTCATACTAATCT
* * ** * * *
36840 CGTATTCTTTTCAAGATTAGGCCCCATAAACGTAGTCTTCTTATATAGATACAGGATATTGATGA
1 C-CATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATA-AGATACATGATATTGATGC
* * * ** ** * *
36905 TTTGGTTTCACAAGAAAAGCTTTTTTCCTATCAATTTTTGTAAATTTTAAGTTCGTGCCTCAAAT
64 TTTGGTTTCGCAAGAAACGCTTTCTTCC-CCCAATTTTTGTAAA-TCAAAGTT-GTTCCTTAAAT
* * * * ***
36970 GAGACGAACAAGGATT-TTAGTAAGGATCT
126 GAGACAAACATGAATTCTCA-TACTAATCT
* * * * * * * * *
36999 TCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTA-TAAGATACATGATATTGATGCT
** * * * ** ** *** *
37064 TTCCTTTTGCATGGAAATC-TTTTCTTTGCCTTATTCTCCATAAAATCAAAGTT-TGCACTTTAA
65 TTGGTTTCGCA-AGAAA-CGCTTTCTTCCCCCAATT-TTTGT-AAATCAAAGTTGTTC-C-TTAA
* ** * *
37127 ACGAGACATGCATTG-ATTCTCGTA-AAAGTCT
124 ATGAGACAAACA-TGAATTCTCATACTAA-TCT
* * * * * * * * * *
37158 CCAATTCTTTTCAAGATTGGGAACAAAAAACTCATTCCTT-TCATTAGGATACATGACAATGTTG
1 CC-ATTCTTTTCAAGATTAGGCACCATAAACACATT-CTTCTTA-TAAGATACATGATATTGATG
* * * * *
37222 CTTTGGTGTCGCAAGAGAA-GCTTGTCTTTCCACC-GTTATTGATGGAATCAAAGTT-TGTCTCT
63 CTTTGGTTTCGCAAGA-AACGCTT-TC-TTCCCCCAATTTTTG-T-AAATCAAAGTTGT-TC-CT
* * ** * *
37284 TAAATAAGGCAAACATGAACACTCCTGCTAATC-
121 TAAATGAGACAAACATGAATTCTCATACTAATCT
* * ** * * *
37317 CACATTCTTTTCCAGATTAGGAACCATAAACGTAGTCTTCTCATAAGGATACATGACATTGATGC
1 C-CATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAA-GATACATGATATTGATGC
* * * * * * *
37382 TTTGGTTTCGCAATAAACGCTTTCTTCCTTCCAACTTTTGTAAAGT-ATCACTTCATTCCTCAAA
64 TTTGGTTTCGCAAGAAACGCTTTCTTCC-CCCAATTTTTGTAAA-TCA-AAGTT-GTTCCTTAAA
* * *
37446 TTAGACAAACATGGATTCTAGCA-AC-GATCT
125 TGAGACAAACATGAATTCT--CATACTAATCT
* * ** * * * * * * ** *
37476 TCATTCATTTCGTGATTAGGCACTATTAAACACATTCTCCTCATTAGGATAAAGGGGATTGATGG
1 CCATTCTTTTCAAGATTAGGCACCA-TAAACACATTCTTCTTA-TAAGATACATGATATTGATGC
** * * * * * * *
37541 TTTTCTTTTGCATCGAAATC-TTTTCTT-CGCCACATTTTCCT-TAAACTAAAAGTTTGTACTTT
64 TTTGGTTTCGCA-AGAAA-CGCTTTCTTCCCCCA-ATTTT--TGTAAA-TCAAAG-TTGTTCCTT
* * ** * *
37603 AAAAGTGACATGCATTG-ATTCTCGTA-AAAGTCT
122 AAATGAGACAAACA-TGAATTCTCATACTAA-TCT
* * * * * * * * * *
37636 CCACTCTTTCCAAGATTAGG-ATCCAAAAATACTTTC-CCTTCATTAGGATACATGACACTGGTG
1 CCATTCTTTTCAAGATTAGGCA-CCATAAACACATTCTTCTT-A-TAAGATACATGATATTGATG
* * **
37699 CTTTGGTGTT-GCAAGAGAA-GCTTTTCTTTCCACC-GTTAATGATAAAATCAAAGTT-TATCTC
63 CTTTGGT-TTCGCAAGA-AACGC-TTTC-TTCCCCCAATTTTTG-T-AAATCAAAGTTGT-TC-C
* * * *
37760 TTAAATAAGACAAACATGAATACTCTTACTAATCC
120 TTAAATGAGACAAACATGAATTCTCATACTAATCT
* ** ** * * *
37795 CCATTGTTTTCTGGATTAGGCACCATAAACTTAGTCTTTTTATATGGATACATGATATTGATGCT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATA-AGATACATGATATTGATGCT
* * * * * *
37860 TTGGTTTCGCAAGATACGCTTAT-GTCCCACCAAATTTGTGTAAATTCTAAGTTCGTGCCTCAAA
65 TTGGTTTCGCAAGAAACGCTT-TCTTCCC-CC-AATTTTTGTAAA-TCAAAGTT-GTTCCTTAAA
* ***
37924 TGAGACAAACATGGATTCT-AGTAAGGATCT
125 TGAGACAAACATGAATTCTCA-TACTAATCT
* * * ** * ** * * *
37954 TCATTCATTTCATGATTAGGCACTGTAAACACATTCTCCTCCTCAGGATGCATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTAT-AAGATACATGATATTGATGCT
** * * * ** ** * *
38019 TTTCTTTTGCATGTAAATC-TTTTCTTTGCCTTATTTTCTATATAATCAAAGTT-TGCACTTTAA
65 TTGGTTTCGCAAG-AAA-CGCTTTCTTCCCCCAATTTT-TGTA-AATCAAAGTTGTTC-C-TTAA
** * * *
38082 ATGAGACATGCATTG-ATTCTCGTAATAGTCT
124 ATGAGACAAACA-TGAATTCTCATACTAATCT
* * * * *
38113 CCGTTCTTTTCAAGATTAGG-AGCCAAAAACACATTCCTT-TCATTAGGATACATGACATTGATG
1 CCATTCTTTTCAAGATTAGGCA-CCATAAACACATT-CTTCTTA-TAAGATACATGATATTGATG
* * * * *
38176 CTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACC-ATTATTGGTAGAATCAAAGTT-CTCTCTTA
63 CTTTGGTTTCGCAAGAAACGCTT-TC-TTCCCCCAATT-TTTGTA-AATCAAAGTTGTTC-CTTA
* * * *
38239 AATAAGACAAACGTGAATACTCATACTAATCC
123 AATGAGACAAACATGAATTCTCATACTAATCT
* * * * ** * * * *
38271 CCAATCTTTTCTAGGTTAGGCAACATAAACTTAGTCTTCTCATATGGATACATGATATTAATGCT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATA-AGATACATGATATTGATGCT
* * * * * * *
38336 TTGGTTTCGCAA-AATATGCTTTCTTCCCACCAACTTGTGTAAAGT-ATGAGTTCATTGCTCAAA
65 TTGGTTTCGCAAGAA-ACGCTTTCTTCCC-CCAATTTTTGTAAA-TCA-AAGTT-GTTCCTTAAA
* * ***
38399 TGAGACAAACATGCATTCGT-GTAGGGATCT
125 TGAGACAAACATGAATTC-TCATACTAATCT
* * ** * * * * * *
38429 TCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCGCTT-TAGGATAAATGATGTTGATGG
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCT--TCTTATAAGATACATGATATTGATGC
** * ** * ** ** *
38493 TTTTCTTTTGCGTGGAAATC-TTTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTT-TGCCCTTT
64 TTTGGTTTCGC-AAGAAA-CGCTTTCTTCCCCCAATTTT--TGT-AAATCAAAGTTGT-TCC-TT
** * *
38555 AAATGAGACCTACATTG-ATTCTCGTA-AAAGTCT
122 AAATGAGACAAACA-TGAATTCTCATACTAA-TCT
* ** * * * *
38588 CCACTCTTTTCAAGATT-GTAAACCAAAAACACATT-TCCTTCATTAGGATACATGACATTGATG
1 CCATTCTTTTCAAGATTAG-GCACCATAAACACATTCTTCTT-A-TAAGATACATGATATTGATG
* * * * *
38651 CTTTGGTGTCGCAATAGAA-GCTTTTCTT--TCCAACGTTATTGGTAAAATCAAAGTT-TGCCTC
63 CTTTGGTTTCGCAAGA-AACGC-TTTCTTCCCCCAA--TT-TTTGT-AAATCAAAGTTGT-TC-C
* * *
38712 TTAAATAAGACAAACATGAATACTCATACTAATCC
120 TTAAATGAGACAAACATGAATTCTCATACTAATCT
* * * * ** * * *
38747 CCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCCCATAAGGATACAGGATATTAATGAT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAA-GATACATGATATTGATGCT
* * * * *
38812 TTGGTTTCGCAAGAAACGCTTTTTTCCCATCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATG
65 TTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCAAAGTT-GTTCCTTAAATG
* * ***
38877 AGACAAATATGGATTCT-AGTAAGGATCT
127 AGACAAACATGAATTCTCA-TACTAATCT
* * * * ** * * * *
38905 TCATTCATTTCATGATTAGGCACTATAAACATGTTCTCCTCATGAAGATGCATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTAT-AAGATACATGATATTGAT-GC
** * ** ** * ** ** * *
38970 TTTTTTTTTGCATTAAAATCTTTTTTTTCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAA
64 TTTGGTTTCGCAAGAAACGCTTTCTTCCCCCAATTTT--TGT-AAATCAAAG-TTGTTCCTTAAA
* ** ** ** *
39034 TGCGACATGCATTCATTCTTGTA-AAAGTCT
125 TGAGACAAACATGAATTCTCATACTAA-TCT
* * * * * * * * * *
39064 CCATTATTTTTAAG-TTGGGAACCAAAAACACATTC-CCTTCATTAGGAAACATGACAATGATGC
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTT-A-TAAGATACATGATATTGATGC
* * * * *
39127 TTT-GTTGTCGCAA-AAGAAGCCTGTCTTTCCACC-GTTATTGATAGAATCAAAGTT-TGTCTCT
64 TTTGGTT-TCGCAAGAA-ACG-CTTTC-TTCCCCCAATTTTTG-TA-AATCAAAGTTGT-TC-CT
* * * * * *
39188 TAAATAAGAAAAACCTTAATACTCATACTAATCG
121 TAAATGAGACAAACATGAATTCTCATACTAATCT
* ** * * * * *
39222 ACATTCTTTTCTGGTTTAGGCACCATAAACATAGTCTTCTTATACGGATAAATGATATTGATGCT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATA-AGATACATGATATTGATGCT
* * * * * *
39287 TTGGTTTTGCTAGAAATGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTTTTGCCTCAAATG
65 TTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCAAAGTTGTT-CCTTAAATG
* * * * *
39352 AGACAAACAGGGATTCTGGCAAAATGATCT
127 AGACAAACATGAATTCT--CATACTAATCT
* ** * * * * * * *
39382 TCATTCGTTTT-GTGATTAGGCACTATAAACACTTTCTTCTCATTAGCATAAATGATATTGACGG
1 CCATTC-TTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAAG-ATACATGATATTGATGC
*** * ** * * * *
39446 TTTTCATTCGCACGAAAATCTTTTCTTTCCCCTATTTTACT-TAAAATCAAAGTTTGTCCCTTCA
64 TTTGGTTTCGCAAGAAACGC-TTTCTTCCCCCAATTTT--TGT-AAATCAAAG-TTGTTCCTTAA
* * * ** * *
39510 AT-AGGGCAAGCATTG-ACTCTTGTAATAGTCT
124 ATGA-GACAAACA-TGAATTCTCATACTAATCT
** * * * * * * * * * *
39541 CTTTTTTTTTTTTCAAAATTAAGAACCAAAAATAGATTC-CCTTCATTAGGATACATGACATTGA
1 C---CATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTT-A-TAAGATACATGATATTGA
* * * *** * * *
39605 TGCCTTGGTGTCACAAGAGAA-GCTTTTCTTTCTATCGA-TATTGATAAAATCAAAGTTTTTCTC
61 TGCTTTGGTTTCGCAAGA-AACGC-TTTC-TTCCCCCAATTTTTG-T-AAATCAAAGTTGTTC-C
* * * * *
39668 TTAAGTAAGACAAACATGAATACTCATACAAATCC
120 TTAAATGAGACAAACATGAATTCTCATACTAATCT
* * * * *
39703 CCATTCTTTTC-AGTATTAGGCACCATAAACATAGTCTTCTCAGAACAATACATGATATTGATGC
1 CCATTCTTTTCAAG-ATTAGGCACCATAAACACATTCTTCTTATAA-GATACATGATATTGATGC
* * * * ** *
39767 TTTGGTTTCGCAAGAAATGCTTTCTTCCCACCTATTTTTGTAACGT-ATGAGTTCAATCCTCAAA
64 TTTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAA-ATCA-AAGTT-GTTCCTTAAA
* ***
39831 TGAGACAAACATGGATTCT-AGTAAGGATCT
125 TGAGACAAACATGAATTCTCA-TACTAATCT
* ** * * * *
39861 TCATTCATTTT-GTGATTAGGCACTATAAATACATTCTCCTCTT-TAGGATAAATGATATTGATG
1 CCATTC-TTTTCAAGATTAGGCACCATAAACACATTCT--TCTTATAAGATACATGATATTGAT-
* ** * * * * ** *** ** *
39924 GTTTTTTTTTTGCATGGAAATC-TTTTCCTT-GCCTTATTTTCCAAAAAATCAAAGATTGCACTT
62 GCTTTGGTTTCGCA-AGAAA-CGCTTT-CTTCCCCCAATTTT--TGTAAATCAAAG-TTGTTCCT
** * *
39987 TAAATGAGACATGCACTG-ATTCTCGTA-AAAGTCT
121 TAAATGAGACAAACA-TGAATTCTCATACTAA-TCT
* * * ** * ** * *
40021 CCATTCTTTTCAAGATTAGGAACCAAAAACACATTCCTT-TCATTGGGATACGTGGCAATGTTGC
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATT-CTTCTTA-TAAGATACATGATATTGATGC
* * * * ** *
40085 TTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACC-GTTACTGATGGAATCAAAGTT-TGTCTCTTA
64 TTTGGTTTCGCAAGAAACGCTT-TC-TTCCCCCAATTTTTG-T-AAATCAAAGTTGT-TC-CTTA
* * *
40148 AATAAGACAAACATGAATACTTATACTAATC-
123 AATGAGACAAACATGAATTCTCATACTAATCT
* *
40179 CACATTCTTTTCCAA-ATTAGGCACCATAAACATAGTCTTCTTATACAGATACATGATATTGATG
1 C-CATTCTTTT-CAAGATTAGGCACCATAAACACATTCTTCTTATA-AGATACATGATATTGATG
* * * *
40243 CTTTGGTTTCGCAAGATACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAA
63 CTTTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCAAAGTT-GTTCCTTAAA
* ***
40308 TGAGACAAACATGGATTCT-AGTAAGGATCT
125 TGAGACAAACATGAATTCTCA-TACTAATCT
* * * * * * * * * *
40338 TCATTCATTTCATGATTAGGCACTATAAATACATTCTCCTCAATAGGATGCATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCT-TATAAGATACATGATATTGATGCT
** * * * * ** ** ** *
40403 TTTCTTTTGCATGGAAATGTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTT-TGCACGTTAAA
65 TTGGTTTCGCA-AGAAACGCTTTCTTCCCCCAATTTT-TGT-AAATCAAAGTTGTTC-C-TTAAA
* ** *
40467 TTAGACATGCATTG-ATTCTCGTA-TAAGTCT
125 TGAGACAAACA-TGAATTCTCATACTAA-TCT
** * * * * * * * * *
40497 TTATTCTTTTCAAGAATAGGAACCAAAAACACATTCCTT-TCATTAGTATACAAGACAATGTTGC
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATT-CTTCTTATAAG-ATACATGATATTGATGC
* * * * * *
40561 TTTGGTGTCGCAAGAGA-GCTTGTCTTTCCACC-GTTATTGATGGAATCAAAGTTG-TCTCTTAA
64 TTTGGTTTCGCAAGAAACGCTT-TC-TTCCCCCAATTTTTG-T-AAATCAAAGTTGTTC-CTTAA
* * * * * *
40623 ATAAGAAAAACCTAAATACTCATACTAATCG
124 ATGAGACAAACATGAATTCTCATACTAATCT
* * * * *
40654 CCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTACCTT-TAATGATACATGATATTGACGC
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCT-TCTTATAA-GATACATGATATTGATGC
* * * * * * *
40718 TTTGGTTTCCCAAGATATGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCTGCCTCAAATG
64 TTTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCAAAGTTGTTCCTTAAATG
* ***
40783 AGACAAACATGGATTCT-AGTAGGGATCT
127 AGACAAACATGAATTCTCA-TACTAATCT
* * * * * ** * * *
40811 TCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCGTCAGGATGCATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTAT-AAGATACATGATATTGATGCT
** * * ** ** ** *
40876 TTTCTCTT-GCATGGAAAAC-TTTTCTTTGCCTTATTTTCCATAAAATCAAAGTT-TGCACTTTA
65 TTGGT-TTCGCA-AG-AAACGCTTTCTTCCCCCAATTTT-TGT-AAATCAAAGTTGTTC-C-TTA
**
40938 AATGAGACATGCATTG-ATTCTCATAAC-AATCT
123 AATGAGACAAACA-TGAATTCTCAT-ACTAATCT
* * * * * * *
40970 CCACTCTTTTCAAGATTAGGAACCAAAAACACATTCCTT-TCATTAGGATACATGACATTGGTG-
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATT-CTTCTTA-TAAGATACATGATATTGATGC
* * *
41033 TGTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCC--TTATTGATAGAATCAAAGTTG-TCTCTT
64 T-TTGGTTTCGCAAGAAACGCTT-TC-TTCC-CCCAATTTTTG-TA-AATCAAAGTTGTTC-CTT
* * * *
41095 AAATAAGACAAACATGAATACTCATGCTAGTC-
122 AAATGAGACAAACATGAATTCTCATACTAATCT
* * * * ** * *
41127 CCTATTCTTTTCAGGATCAGGCACCACAAACATAGCCTTCTTTTAAGGAAACATGATATTGATGC
1 CC-ATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAA-GATACATGATATTGATGC
* * * * * * *
41192 TTTGGTTTCGGAAGATATGCTTTCTTCCCTCCAATTTGTGTAAATTCTAAGTTCGTGCCTCAAAT
64 TTTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCAAAGTT-GTTCCTTAAAT
* ***
41257 GAGACAAACATGGATTCT-ATTAAGGATCT
126 GAGACAAACATGAATTCTCA-TACTAATCT
* * * * * * * * * *
41286 TCACTCATTTCATGATTAGGCACTATAAATACATTCTCCTCATCAGCATACATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAAG-ATACATGATATTGATGCT
** * * * ** ** ** *
41351 TTTCTTTTGCATGGAAATC-TTTTCTTTGCCTTATTTTCCATAAAATCAAAGTT-TGCACTTTAA
65 TTGGTTTCGCA-AGAAA-CGCTTTCTTCCCCCAATTTT-TGT-AAATCAAAGTTGTTC-C-TTAA
* ** * *
41414 ATGTGACATGCATTG-ATTCTCGTAAC-AGTCT
124 ATGAGACAAACA-TGAATTCTCAT-ACTAATCT
* * * * * *
41445 CCATTCTTTTCAAGATTAGGAACCAAAAACACAATCCTT-TTATTAGGATACATCACATTGATGC
1 CCATTCTTTTCAAGATTAGGCACCATAAACAC-ATTCTTCTTA-TAAGATACATGATATTGATGC
* * * *
41509 TTTGGTGTCGCAAGAGAA-GCTGGTCTTTCCCCC-GTTATTGATAGAATCAAAGTTG-TCTCTTA
64 TTTGGTTTCGCAAGA-AACGCT-TTC-TTCCCCCAATTTTTG-TA-AATCAAAGTTGTTC-CTTA
* * *
41571 AATAAGACAAACATGAATACTCATACTAATCC
123 AATGAGACAAACATGAATTCTCATACTAATCT
* * *
41603 CCATTCTTTTCTAGATTAGGCACCATAAACATAGTCTTCTTATACAGATACATGATATTGATGCT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATA-AGATACATGATATTGATGCT
* * *
41668 TTGGTTTCGCAAGATACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCGTTCCTCAAATG
65 TTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCAAAGTT-GTTCCTTAAATG
* * ***
41733 ACACAAACATGGATTCT-AGTAGGGATCT
127 AGACAAACATGAATTCTCA-TACTAATCT
* * ** * * * ** * * *
41761 TCATTCATTTCGTGATTAGGGACTATAAACACATTCTCCTCGTCAGGATGCATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTAT-AAGATACATGATATTGATGCT
** * * * ** ** ** *
41826 TTTCTTTTGCATGGAAAAC-TTTTCTTTGCCTTATTTTCCATAAAATCAAAGTT-TGCACTTTAA
65 TTGGTTTCGCA-AG-AAACGCTTTCTTCCCCCAATTTT-TGT-AAATCAAAGTTGTTC-C-TTAA
** * *
41889 ATGAGACATGCATTAATTCTCGTAAC-AATCT
124 ATGAGACAAACATGAATTCTCAT-ACTAATCT
* * * * * * * *
41920 CCATTATTTTCAAGATTAGGAACCAAAAACACATTCCTT-TCATTAGGATAAATGACATTGGTGC
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATT-CTTCTTA-TAAGATACATGATATTGATGC
* * * * * ** *
41984 GTTGGTGTCGGAAGAAAAGCTTGTCTTTCCACC-GGTATTGATAGAATCAAAGTTG-TCTCTTAA
64 TTTGGTTTCGCAAGAAACGCTT-TC-TTCCCCCAATTTTTG-TA-AATCAAAGTTGTTC-CTTAA
* * * *
42047 ATAAGACAAACATGAATACTCATGCTAATCC
124 ATGAGACAAACATGAATTCTCATACTAATCT
* * * ** *
42078 CCATTCTTTTCAAGATCAGGCACCACAAACATAGCCTTCTTTTAAGGATACATGATATTGATGCT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAA-GATACATGATATTGATGCT
* * * * *
42143 TTGGTTTCGCAAGATACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCATGCCTCAAATG
65 TTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCAAAGTT-GTTCCTTAAATG
* * ** ***
42208 AGACAAACGTGGATTCTTGTAAGGATCT
127 AGACAAACATGAATTCTCATACTAATCT
* * * * * * * * * *
42236 TCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGATGCATGAAATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTAT-AAGATACATGATATTGAT-GC
** * * * * ** **
42301 TTTCTTTTTGCATCGAAATC-TTTTCATT-GCCTTATTTTCCATAAAATCAAAGTT-TTCACTTT
64 TTTGGTTTCGCA-AGAAA-CGCTTTC-TTCCCCCAATTTT-TGT-AAATCAAAGTTGTTC-C-TT
** **
42363 AAATGAGACACGCATTG-ATTCTCATAAC-AGCCT
122 AAATGAGACAAACA-TGAATTCTCAT-ACTAATCT
* * * * * * *
42396 CAATTCTTTTCAAGATTAGG-ATCCAAAAACACATTCCTCTCATTAGGATGCATGACATTGATGC
1 CCATTCTTTTCAAGATTAGGCA-CCATAAACACATTCTTCTTA-TAAGATACATGATATTGATGC
* * * *
42460 TTTGGTGTCGCAAGAGAA-GCTTGTATTTCCCCC-GTTATTGGTAGAATCAAAGTTG-TCTCTTA
64 TTTGGTTTCGCAAGA-AACGCTT-T-CTTCCCCCAATT-TTTGTA-AATCAAAGTTGTTC-CTTA
* * * *
42522 AATAAGACAAACTTGAATACTCATACTAATCC
123 AATGAGACAAACATGAATTCTCATACTAATCT
* * * * *
42554 CCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTTTAAGGGTACATGATATTGATGCT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAA-GATACATGATATTGATGCT
* * * * * * *
42619 TTGGTTTCGCAAGATACGTTTTTTTCCCACCAATTTGTGTAAATTCTAAGTTTGTGCCTCAAATG
65 TTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCAAAG-TTGTTCCTTAAATG
* ***
42684 AGACAAACATGGATTCT-AGTAAGGATCT
127 AGACAAACATGAATTCTCA-TACTAATCT
* * * ** * * * * * *
42712 TCATTCATTCCGTGATTAGGCACTATAAACACATTCTCCTCATCAGGATGCATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTAT-AAGATACATGATATTGATGCT
** * * * ** ** ** *
42777 TTTCTTTTGCACAAAAATC-TTTTCTTTGCCTTATTTTCCATAAAATCAAAGTT-TGCACTTTAA
65 TTGGTTTCGCA-AGAAA-CGCTTTCTTCCCCCAATTTT-TGT-AAATCAAAGTTGTTC-C-TTAA
* **
42840 ATGAGACACACATTG-ATTCTCATAAC-AGCCT
124 ATGAGACAAACA-TGAATTCTCAT-ACTAATCT
* * * * * *
42871 CCATTCTTTTCAAGATTAGG-ATCCAAAAACAAATTTCTT-TCATACGGATGCATGACATTGATG
1 CCATTCTTTTCAAGATTAGGCA-CCATAAACACA-TTCTTCTTATA-AGATACATGATATTGATG
* * * ** * **
42934 CTTTGGTGTCGCAAGAGAA-GGTTGTCTTACCCCC-GTTACTGATAGAATCAAAGTCG-TCTCAA
63 CTTTGGTTTCGCAAGA-AACGCTT-TCTT-CCCCCAATTTTTG-TA-AATCAAAGTTGTTC-CTT
* * * * *
42996 AAATAAGACAAACGTGAATACTCATGCTAATCC
122 AAATGAGACAAACATGAATTCTCATACTAATCT
* * ** * ** * * * *
43029 CCTTTCCTTTCTGGATTAGGCACCAGACGCATAGTCTTCTTATACGGATACATGATATGGATGCT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATA-AGATACATGATATTGATGCT
* * * * * * *
43094 TTGGTTTCACAAGATACGCTTTCTTCCCACCAATTTGTGTAAAGT-ATGAGTTCATTGCTCAAAT
65 TTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCA-AAGTT-GTTCCTTAAAT
* * ** ***
43158 AAGACAAACATGGATTCTTGTAGGGATCT
126 GAGACAAACATGAATTCTCATACTAATCT
* * ** ** * * * * *
43187 TCATTCATTTCGTGATTAGGCATTATAAATACATTCTCCGCTT-TAGGATAAATGATATTGATGG
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCT--TCTTATAAGATACATGATATTGATGC
** * ** ** ** * * * *
43251 TTTTCTTTCGCATGAAAATCATTTCTTTGCCTTATTTACCTT-AAAATCATAGTTTGTACTTTAA
64 TTTGGTTTCGCAAGAAACGC-TTTCTTCCCCCAATTT---TTGTAAATCAAAG-TTGTTCCTTAA
* ** *
43315 ATAAGACATGCATTG-ATTCTCATA-AAAGTCT
124 ATGAGACAAACA-TGAATTCTCATACTAA-TCT
* * ** * * *
43346 CCATTCTTTGCAAGATTAGG-ATCCAAAAATGCATTCCTT-TCATTAGGATACATGACATTGATG
1 CCATTCTTTTCAAGATTAGGCA-CCATAAACACATT-CTTCTTA-TAAGATACATGATATTGATG
* * * *
43409 CTTTGGTGTCGCAAGAGAA-GCTTGTCTTTCCACC-GTTATTGATAGAATCAAAGTTG-TCTCTT
63 CTTTGGTTTCGCAAGA-AACGCTT-TC-TTCCCCCAATTTTTG-TA-AATCAAAGTTGTTC-CTT
* * * *
43471 AAATAAGGCAAACATGAATACTCATACTAATCC
122 AAATGAGACAAACATGAATTCTCATACTAATCT
** * * * * *
43504 CCATTCTTTTCTGGATTAGGCACCCTAAACATAGTCTTCTTATACGGATACATGATTTTGATGCT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATA-AGATACATGATATTGATGCT
* * * * * * * *
43569 TTGCTTTTC-TAAGATACGCTTTCTTCCCATCAATTTGTGTAAATTCTAAGTTCGTGCCTCAAAT
65 TTG-GTTTCGCAAGAAACGCTTTCTTCCC-CCAATTTTTGTAAA-TCAAAGTT-GTTCCTTAAAT
* ***
43633 GAGACAAACATGGATTCT-AGTAAGGATCT
126 GAGACAAACATGAATTCTCA-TACTAATCT
* * * * ** * * * * *
43662 TCACTCATTTCATGATTAGGCACTGTAAACATATTCTCCTGATCAGCATACATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAAG-ATACATGATATTGATGCT
** * * ** ** ** *
43727 TTTCTTTTGCACAGAAATC-TTTTCTTTGCCTTATTTTCCATAAAATCAAAGTT-TGCACTTTAA
65 TTGGTTTCGCA-AGAAA-CGCTTTCTTCCCCCAATTTT-TGT-AAATCAAAGTTGTTC-C-TTAA
* ** * *
43790 ATGAGTCATGCATTG-ATTCTCGTAAC-AGTCT
124 ATGAGACAAACA-TGAATTCTCAT-ACTAATCT
* * * * * *
43821 CTATTCTTTTCAAGATTAGGAACCAAAAACACATT-TAT-TTCATTAGGATACATCACATTGATG
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCT-TCTT-A-TAAGATACATGATATTGATG
* * *
43884 CTTTGGTGTCGCAAGAGAA-GCTTGTCTTTCCCCC-GTTATTGATAGAATCAAAGTTG-TCTCTT
63 CTTTGGTTTCGCAAGA-AACGCTT-TC-TTCCCCCAATTTTTG-TA-AATCAAAGTTGTTC-CTT
* * * *
43946 AAATAAAACAAACATGAATACTCATACTAATCC
122 AAATGAGACAAACATGAATTCTCATACTAATCT
** * * * * * * *
43979 CCATTCTTTTCTGGATTAGGCACCATAAACATAGTCTTCTCATATGGATACATGACATTAACGCT
1 CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATA-AGATACATGATATTGATGCT
* *
44044 TTAGTTTCGCAAGATACGCTTTCTTCCCACCAATTT
65 TTGGTTTCGCAAGAAACGCTTTCTTCCC-CCAATTT
44080 GTGGAAAGCA
Statistics
Matches: 6545, Mismatches: 2099, Indels: 1308
0.66 0.21 0.13
Matches are distributed among these distances:
154 2 0.00
155 37 0.01
156 162 0.02
157 514 0.08
158 2566 0.39
159 2375 0.36
160 677 0.10
161 117 0.02
162 86 0.01
163 9 0.00
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (154 bp):
CCATTCTTTTCAAGATTAGGCACCATAAACACATTCTTCTTATAAGATACATGATATTGATGCTT
TGGTTTCGCAAGAAACGCTTTCTTCCCCCAATTTTTGTAAATCAAAGTTGTTCCTTAAATGAGAC
AAACATGAATTCTCATACTAATCT
Found at i:44555 original size:97 final size:98
Alignment explanation
Indices: 44376--44560 Score: 255
Period size: 97 Copynumber: 1.9 Consensus size: 98
44366 TTATTGATAA
** * * *
44376 AATCAAAGTTTGCCTCTTAAATAAGGCAAACTTGAATACTCATGCTAATCCCCATACCTTTCAAG
1 AATCAAAGTTTGCCTCTTAAATAAGAAAAACCTAAATACTCATACTAATCCCCATACCTTTCAAG
*
44441 AATAGGCACCGTAAACATAGTCTTCCTATACGG
66 AATAGGCACCATAAACATAGTCTTCCTATACGG
* * * * *
44474 AATCAAAG-TTGTCTCTTAAATAAGAAAAACCTAAATACTCATACTAATCGCCATTCTTTTCAGG
1 AATCAAAGTTTGCCTCTTAAATAAGAAAAACCTAAATACTCATACTAATCCCCATACCTTTCAAG
*
44538 ATTAGGCACCATAAACATAGTCT
66 AATAGGCACCATAAACATAGTCT
44561 ACCTTTAATG
Statistics
Matches: 75, Mismatches: 12, Indels: 1
0.85 0.14 0.01
Matches are distributed among these distances:
97 67 0.89
98 8 0.11
ACGTcount: A:0.37, C:0.23, G:0.12, T:0.29
Consensus pattern (98 bp):
AATCAAAGTTTGCCTCTTAAATAAGAAAAACCTAAATACTCATACTAATCCCCATACCTTTCAAG
AATAGGCACCATAAACATAGTCTTCCTATACGG
Found at i:49132 original size:158 final size:156
Alignment explanation
Indices: 44648--53064 Score: 1464
Period size: 159 Copynumber: 53.1 Consensus size: 156
44638 GTTCTGCCTC
* ** * * *
44648 AAATGAGACAAAC-TTGGATTCTAGT-AGGGATCTTCATTCATTTCATGATTAGGCACTATAAAC
1 AAATGAGACAAACATT-GATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAAC
* * ** * *
44711 ACATTCTCCTCGTCAGGATGCATGATATTGATGGTTT-TCTCTTGCATGGAAAACTTTTCTTTGC
64 ACATTCTCCTCATTAGGATAAATGATATTGATGGTTTGT-T-TTGCATAGAAATCTTTTCTTTGC
*
44775 CTTATTTTCCGTAAAATCAAAGTTTGCACTTT
127 CTTATTTT-CATAAAATCAAAGTTTGC-CTTT
* *** * * *
44807 AAATGAGGCATTTATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCACCATAAACAC
* * * * * * * * * *
44872 ATTC-CTTTCATTAGGATACATGACATTGATGCCTTTGTGTTGCA-AAAGAAGCATGTCTTTCCA
66 ATTCTC-CTCATTAGGATAAATGATATTGATG-GTTTGTTTTGCATAGA-AATCTTTTCTTT--G
* *** *
44935 CCGTTA--TTGACCGAATCAAAG-TTGTCTCTT
126 CC-TTATTTTCATAAAATCAAAGTTTGCCT-TT
* * * * * * * *
44965 AAATAAGACAAA-AATGAATACTCATACTAA-TCCCCATTC-TGTTCTAGATTAGGCACAATAAA
1 AAATGAGACAAACATTG-ATTCTCGTA-AAAGTCTCCATTCAT-TTCAAGATTAGGCACCATAAA
* * * * * * * * * * **
45027 CATAGTCTTCTTA-TACGGATACAA-GATGTTGAAGCTTTGGTTTCGCAT-GATA-CGCTTTCGC
63 CACATTCTCCTCATTA-GGATA-AATGATATTGATGGTTT-GTTTTGCATAGAAATC-TTTTCTT
** ** * ** * *
45088 CCCACCAATTTGT-GTAATTTCTAAGTTCGTGCC-TC
124 TGC-CTTATTT-TCATAAAATCAAAGTT--TGCCTTT
* * ** * * *
45123 AAATGAGACAAACATGGATTCTAGT-ATGGATCTTCATTCATTTCATGATTAGGCCCCATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* ** * * * *
45187 CATTCTCCTCATCAGGATGCATGATATTGATGGTTTTCTTTTGCGTGGAAATCTTTTCATTGCCT
65 CATTCTCCTCATTAGGATAAATGATATTGATGG-TTTGTTTTGCATAGAAATCTTTTCTTTGCCT
* *
45252 TATTTTCCTTAAAATCAAAGTTTGTACTTT
129 TATTTT-CATAAAATCAAAGTTTG-CCTTT
* ** * * * *
45282 AAGTGAGACATGCATTGATTCACGTAAAAGTCTCCATTCCTTTCAAGATTAGGAACCAAAAACAC
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCACCATAAACAC
* * * * * * * * *
45347 ATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA-AGAGAAGCTTGTATTT-CC
66 ATTCTC-CTCATTAGGATAAATGATATTGATGGTTT-GTTTTGCATAGA-AATCTTTTCTTTGCC
** * * *
45409 ACCATGATTGATAGAATCAAAGTTTGCCTCTT
128 -TTAT-TTTCATAAAATCAAAGTTTGCCT-TT
* * * * * * * * *
45441 AAATAAGCCAAACA-GGAATACTCATACTAA-TCCCCATTCTTTTCTAGATTAGGCACCATAAAC
1 AAATGAGACAAACATTG-ATTCTCGTA-AAAGTCTCCATTCATTTCAAGATTAGGCACCATAAAC
* * * * * * * *
45504 ATAGTCTTCCT-A-TACGGATACATGATATTGATGCTTTGGTTTCGCA-AGATA-CGCTTTCTTC
64 ACATTC-TCCTCATTA-GGATAAATGATATTGATGGTTT-GTTTTGCATAGAAATC-TTTTCTTT
* ** ** * * * *
45565 CCACCAATTTTTGTAAATTCTATGTTCATGCC-TC
125 GC-CTTATTTTCATAAAATCAAAGTT--TGCCTTT
** * * ** * * * *
45599 AAATGAGACACTCATGGATTCTAGT-ATGGATCTTCATTCATTTTATGATTAGGCACTATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* * ** * *
45663 CATTCTACTCATCAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCT
65 CATTCTCCTCATTAGGATAAATGATATTGATGG-TTTGTTTTGCATAGAAATCTTTTCTTTGCCT
*
45728 TATTTTCCTTAAAATCAAAGTTTATG-CTTT
129 TATTTT-CATAAAATCAAAG-TT-TGCCTTT
* ** * * * * * *
45758 AAATTAGACATGCATTGATTCACATAAAAGTCTCCATTCTTTTCCAGATCAGG-AGCCAAAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCA-CCATAAACA
* ** * * * * * *
45822 CATTC-CTTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGCA-AGAGAAGCTTGTCTTTCC
65 CATTCTC-CTCATTAGGATAAATGATATTGATGGTTT-GTTTTGCATAGA-AATCTTTTCTTT--
* * * *
45885 ACCGTGA--TTGATAGAATCAAAGTTTGCCTCTT
125 GCC-TTATTTTCATAAAATCAAAGTTTGCCT-TT
* * * ** * * * * *
45917 AAATAAGCCAAACA-GGAATAATCATACTAA-TCCCCATTCTTTTCTAGATTAGGCACCATAAAC
1 AAATGAGACAAACATTG-ATTCTCGTA-AAAGTCTCCATTCATTTCAAGATTAGGCACCATAAAC
* * * * * * * * ** * **
45980 ATAGTCTTCTTA-TACGGATACATGATATTGATGCTTCGGTTT-CATAAGATACGCTTTT-GTCC
64 ACATTCTCCTCATTA-GGATAAATGATATTGATGGTTTGTTTTGCAT-AGA-AATCTTTTCTTTG
** * * *
46042 CACCAATTTGT-GTAAATTCTAAGTTCGTGCC-TT
126 C-CTTATTT-TCATAAAATCAAAGTT--TGCCTTT
* ** * ** * ** *
46075 AAATGAGATAAACAAGGATTCTAGT-ATGGATCTTCATTCATTTCTTGACTAGGCACCATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* * * ** * *
46139 CAATCTCCGCATCAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCT
65 CATTCTCCTCATTAGGATAAATGATATTGATGG-TTTGTTTTGCATAGAAATCTTTTCTTTGCCT
46204 TATTTTCCATAAAATCAAAGTTTGCACTTT
129 TATTTT-CATAAAATCAAAGTTTGC-CTTT
** * * * * * *
46234 AAATGAGACATGCATTGATTCTCGTAAAAGACTCCATTCCTTTCAAGATTAAGAACAAAAAACAC
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCACCATAAACAC
* * * * * * * * *
46299 ATTC-CTTTCATTAGTATACATAACATTGATGCTTTGGTGTTGCA-AGAGAATCTTGTCTTTCCA
66 ATTCTC-CTCATTAGGATAAATGATATTGATGGTTT-GTTTTGCATAGA-AATCTTTTCTTT--G
* * *
46362 CCGTTA--TTGATAGAATCAAAG-TTGTCTCTT
126 CC-TTATTTTCATAAAATCAAAGTTTGCCT-TT
* * * * * ** * *
46392 AAATAAGACAAACA-AGAATACTCAG-ACTAA-TCCCCATTTTTTTC-TGTATTAGGCACTATAA
1 AAATGAGACAAACATTG-ATTCTC-GTA-AAAGTCTCCATTCATTTCAAG-ATTAGGCACCATAA
* * * * * * * * * *
46453 ACATAGTCTGCTTA-TACGGGTACATGATATTGATGCTTTGGTTT-CGAAAGATATGCTTTT-TT
62 ACACATTCTCCTCATTA-GGATAAATGATATTGATGGTTTGTTTTGC-ATAGAAAT-CTTTTCTT
** ** * * * *
46515 CCCACCAATTTGT-GT-AAAGCATGAGTTCATTG-C-TC
124 TGC-CTTATTT-TCATAAAATCA-AAG-T--TTGCCTTT
* * ** * ** * * *
46550 AAATGAGACAAACATGGATTCTTGT-AGGGATCTTCATTCATTTCGTGATTAGGCTCTACAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* * * *
46614 CATTCTCCGCTTTAGGATAAATGATATTGATGGTTTTTTTTTTTTGCAT-GAAAATCTTTTGTTT
65 CATTCTCCTCATTAGGATAAATGATATTGATGG----TTTGTTTTGCATAG-AAATCTTTTCTTT
* **
46678 GCCTTATTTTTCCTAAAATCAAAGTTTGTATTTT
125 GCCTTA-TTTTCATAAAATCAAAGTTTG-CCTTT
* ** * * *
46712 AAATGATACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA-T-GGCGAACGAAAAAC
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGC--ACCATAAAC
* * * * * * * * *
46775 ATATT-TCCTTCATTAGGATACATGACAATGATGCTTTGCTGTCGCA-AGAGAACCTTTACTTT-
64 ACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTG-TTTTGCATAGA-AATCTTTTCTTTG
* * * * *
46837 CC-AACGTCATTGATAAAATCAAAATCTGCCTCTT
126 CCTTA--T-TTTCATAAAATCAAAGTTTGCCT-TT
* * * * * * * *
46871 AAAT-AAAGCAAA-TTTGAATACCCATACTAA-TC-CCTATTCCTTTCAAGATTAGGCACTATAA
1 AAATGAGA-CAAACATTG-ATTCTCGTA-AAAGTCTCC-ATTCATTTCAAGATTAGGCACCATAA
* * * * * * * * * **
46932 ACATAGTCTTCTTA-TACGGATACAGGATATT-AGTGATTTGGTTT-CGTAAGAAA-CGCTT-TT
62 ACACATTCTCCTCATTA-GGATAAATGATATTGA-TGGTTTGTTTTGCAT-AGAAATCTTTTCTT
* * ** * * **
46992 TCCCATCAATTTTTTTAAATTCTAAGTTTGTGCC-AC
124 TGCC-T-TATTTTCATAAAATCAAAG-TT-TGCCTTT
* * * * * * *
47028 AAATGAGAGAAACATGGATTCTAGT-AAGGATCTTC-TTGCATTTCATGATTTGGCACCATAAAC
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATT-CATTTCAAGATTAGGCACCATAAAC
* *
47091 ACATTCTCCTCATTAGGAAAAATGATATTGATGGTTTTCTTTTGCAT-GAAAATCTTTTCTTTGC
64 ACATTCTCCTCATTAGGATAAATGATATTGATGG-TTTGTTTTGCATAG-AAATCTTTTCTTTGC
*
47155 CTTATTTTCCGTAAAATCAAAGTTTGCACTTT
127 CTTATTTT-CATAAAATCAAAGTTTGC-CTTT
** * * * *
47187 AAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAAGAACCAAAAACAC
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCACCATAAACAC
* * * * * * * * *
47252 ATTC-CTTTCATTAGGATACATGACATTGATGCCTTGGTGTTGCA-AGAGAAGCTTGTCTTTCCA
66 ATTCTC-CTCATTAGGATAAATGATATTGATG-GTTTGTTTTGCATAGA-AATCTTTTCTTT--G
* *** *
47315 CCGTTA--TTGACCGAATCAAAG-TTGTCTCTT
126 CC-TTATTTTCATAAAATCAAAGTTTGCCT-TT
* * * * * * * *
47345 AAATAAGACCAAA-A-TGAATACTCATACTAA-TCCCCATTC-TACTCTAGATTAGGCACAATAA
1 AAATGAGA-CAAACATTG-ATTCTCGTA-AAAGTCTCCATTCAT-TTCAAGATTAGGCACCATAA
* * * * * * * * * * * *
47406 ACATAGTCTTCTTA-TACGGATACATGATGTTGAAGCTTTGGTTTCGCA-AGATA-CGCTTTCGT
62 ACACATTCTCCTCATTA-GGATAAATGATATTGATGGTTT-GTTTTGCATAGAAATC-TTTTCTT
** ** * * * *
47468 CCCACCAATTTGT-GTAAATTCTAAGTTCATGCC-TC
124 TGC-CTTATTT-TCATAAAATCAAAGTT--TGCCTTT
* * ** * *
47503 AAATGAGACAAACATGGATTCTAGT-ATGGATCTTCATTCATTTCATGATTAGGCACCATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* ** * *
47567 CATTCTCCTCATCAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCT
65 CATTCTCCTCATTAGGATAAATGATATTGATGG-TTTGTTTTGCATAGAAATCTTTTCTTTGCCT
* *
47632 TATTTTCCTTAAAATCAAAGTTTGTGCTTT
129 TATTTT-CATAAAATCAAAGTTTG-CCTTT
** * * * * *
47662 AAATGAGACATGCATTGATTCACATAAAAGTCTCCATTCTTTTCCAGATTAGG-AGCCAAAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCA-CCATAAACA
* * * * * * * *
47726 CATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA-AGAGAAGCTTGTCTTTCC
65 CATTCTC-CTCATTAGGATAAATGATATTGATGGTTT-GTTTTGCATAGA-AATCTTTTCTTT--
* * ** *
47789 ACCGTGA--TTGGTAGAATCAAAGTTTGCCTCTT
125 GCC-TTATTTTCATAAAATCAAAGTTTGCCT-TT
* * * * ** * * * *
47821 AAATAAGCCAAACA-GGAATACTTATAGTAA-TCCCCATTCTTTTCTAGATTAGGCACCATAAAC
1 AAATGAGACAAACATTG-ATTCTCGTA-AAAGTCTCCATTCATTTCAAGATTAGGCACCATAAAC
* * * * * * * * * ** * **
47884 ATAGTCTTCTTA-TACGGATACATGATAATGATGCTTTGGCTTTGGA-AGATACGCTTTT-GTCC
64 ACATTCTCCTCATTA-GGATAAATGATATTGATGGTTT-GTTTTGCATAGA-AATCTTTTCTTTG
* * * * *
47946 CACTAATTTGT-GTTAATTCTAAGTTAATGCC-TT
126 C-CTTATTT-TCATAAAATCAAAGTT--TGCCTTT
* ** * ** * ** *
47979 AAATGAGATAAACAAGGATTCTAGT-ATGGATCTTCATTCATTTCTTGACTAGGCACCATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* * ** ** *
48043 CAATCTCCGCAACAGGATGCATGATATTGATGGTTTTGTTTTGCATGGAAATCTTTTCTTTGCCT
65 CATTCTCCTCATTAGGATAAATGATATTGATGG-TTTGTTTTGCATAGAAATCTTTTCTTTGCCT
48108 TATTTTCCATAAAATCAAAGTTTGCACTTT
129 TATTTT-CATAAAATCAAAGTTTGC-CTTT
** * * * * *
48138 AAATGAGACATGCATTGATTCTCGTAAAAGAT-TCCATTCCTTTCAAGGTTAGGAACAAAAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* * * ** * * * * * *
48202 CATTC-CTTTCATTAGTATACATGACCTTGATGCTTTGGTGTCGCA-AGAGAAGCTTGTGTTTCC
65 CATTCTC-CTCATTAGGATAAATGATATTGATGGTTT-GTTTTGCATAGA-AATCTTTTCTTT--
* * * *
48265 ACCGTTA--TTGATAGAATCAAAG-TTGTCTCTT
125 GCC-TTATTTTCATAAAATCAAAGTTTGCCT-TT
* * * * * * * **
48296 AAATAAGACAAACA-AGAATACTCATACTAA-TCCCCATTCTTTTCTGGATTAGGCACCATAAAC
1 AAATGAGACAAACATTG-ATTCTCGTA-AAAGTCTCCATTCATTTCAAGATTAGGCACCATAAAC
* * * * * * * * * * * * * **
48359 ATAGTCTTCTCA-AATGGATACATGACATTAACGCTTTGGTTT-CACA-AGATACGCTTTCTTCC
64 ACATTCTCCTCATTA-GGATAAATGATATTGATGGTTTGTTTTGCATAGAAAT-C-TTTTCTTTG
** ** * * *
48421 CACCAATTTGT-GGAAAGT-ATGAGTTCATTG-C-TC
126 C-CTTATTT-TCATAAAATCA-AAG-T--TTGCCTTT
* * * ** * * * *
48454 AAATGAGACAAAGATGGATTCTTGT-AGGGATCTTCATTCATTTCATGATTAGGCACTATAAAGA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* * * * * * *
48518 CATTCTCCGCTTTAGGATAAATGATATTCATGGTTTTCTTTTACATGGAAATCTTTTCTTAGCCT
65 CATTCTCCTCATTAGGATAAATGATATTGATGG-TTTGTTTTGCATAGAAATCTTTTCTTTGCCT
* *
48583 TATTTTCCTTAAAATCAAAGTTTGTACTTT
129 TATTTT-CATAAAATCAAAGTTTG-CCTTT
** * * * * *
48613 AAATGAGACATGCATTGATTCTCGTAAGAGTCGCCATTCTTTTCAAGATT-GTGAACCAAAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAG-GCACCATAAACA
* * * * * *
48677 CATTC-CCTTCATTAGGATACATGACATTGATGCTTTGTTGT-CACAAGAGAAGCTTTTCTTT-C
65 CATTCTCC-TCATTAGGATAAATGATATTGATGGTTTGTTTTGCA-TAGA-AATCTTTTCTTTGC
* *
48739 C-AACGTTATTGATAAAATCAAAGTTTGCCTCTT
127 CTTA--TT-TTCATAAAATCAAAGTTTGCCT-TT
* * * * ** * * * * *
48772 AAATAAGGCAAAC-TTGAATACTCATGCTAA-TCCCCATACCTTTCAAGAATAGGCACCGTAAAC
1 AAATGAGACAAACATTG-ATTCTCGT-AAAAGTCTCCATTCATTTCAAGATTAGGCACCATAAAC
* * ** * * * *
48835 ATAGTCTTCCT-A-TACGGATGCAGGATATTGATGATTTGGTTTCGCA-AGAAATGC-TTT-TTC
64 ACATTC-TCCTCATTA-GGATAAATGATATTGATGGTTT-GTTTTGCATAGAAAT-CTTTTCTTT
* ** * * *
48895 CCCATTAATTTTTGTAAATTCTAAGTTCGTGCC-TC
125 GCC-TT-ATTTTCATAAAATCAAAGTT--TGCCTTT
* * * * * * * *
48930 AAATGAGGCAAACATGGATTCTAGT-AAGGATCTTCGTTCATTTCATGATTAGGCACTATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* * * *
48994 CATTCTCCTCATTCGGATAAATGATATTGATGGTTTTTTTTGCATGGAAATCTTTTGTTTGCCTT
65 CATTCTCCTCATTAGGATAAATGATATTGATGGTTTGTTTTGCATAGAAATCTTTTCTTTGCCTT
49059 ATTTTCCATAAAATCAAAGTTTGCACTTT
130 ATTTT-CATAAAATCAAAGTTTGC-CTTT
* ** * * *
49088 GAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCACCATAAACAC
* * * * * * ** ** * * *
49153 GTTC-CTTTCATTTGGATACATGACATTGATGCGTTGGGGTCACA-AGAGAAGCTTGTC--T-AC
66 ATTCTC-CTCATTAGGATAAATGATATTGATG-GTTTGTTTTGCATAGA-AATCTTTTCTTTGCC
** * * * *
49213 AGATATTGATAGAATCAAAG-TTGTCTCTT
128 TTATTTTCATAAAATCAAAGTTTGCCT-TT
* * * * **
49242 AAAT-ATGACAAACA-TGAATACTCATACTAA-TC-CCTATTCTTTTCTGGATTAGGCACCATAA
1 AAATGA-GACAAACATTG-ATTCTCGTA-AAAGTCTCC-ATTCATTTCAAGATTAGGCACCATAA
* * * * * * * * *
49303 ACATAGTCTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCA-AGATATGC-TTTCGT
62 ACACATTCTCCTCATTA-GGATAAATGATATTGATGGTTT-GTTTTGCATAGAAAT-CTTTTCTT
** ** * * * * * * *
49365 CCCACCAATCTGT-GTAAATTCTATGTTCGGGCC-TC
124 TGC-CTTAT-TTTCATAAAATCAAAGTT--TGCCTTT
* * * * ** * * *
49400 AAATGAGACAAACATGGGTACTAGT-ATGGATCTTCATTCATTTCATGATTAGGCACTATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* * ** * * *
49464 CATTCTCCTCATCAAGATGCATGATATTGCTGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCT
65 CATTCTCCTCATTAGGATAAATGATATTGATGG-TTTGTTTTGCATAGAAATCTTTTCTTTGCCT
*
49529 TATATTCCATAAAATCAAAGTTTGCACTTT
129 TAT-TTTCATAAAATCAAAGTTTGC-CTTT
* ** * * * * *
49559 GAATGAGACATGCATTGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTTGG-AACAAAAAGCA
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCACCATAAA-CA
* * * * * * * *
49623 CATT-TCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA-AGAGAAGCTTGTCTTTCC
65 CATTCTC-CTCATTAGGATAAATGATATTGATGGTTT-GTTTTGCATAGA-AATCTTTTCTTT--
* ** * *
49686 ACCGTTA--TAGATAGAATCAAAG-TTGTCTCTT
125 GCC-TTATTTTCATAAAATCAAAGTTTGCCT-TT
* ** * * * * ** * *
49717 AAATAAGACAAA-AGAGAATACTCATACTAA-TCCCCATTTTTTTC-TGTATTAGGCACGATAAA
1 AAATGAGACAAACATTG-ATTCTCGTA-AAAGTCTCCATTCATTTCAAG-ATTAGGCACCATAAA
* * * * * * * * * * *
49779 CATAGTCTTCTTA-TATGGGTACATGATATTGATGCTTTGGTTT-CACAAGATATGCTTTT-TTC
63 CACATTCTCCTCATTA-GGATAAATGATATTGATGGTTTGTTTTGCA-TAGAAAT-CTTTTCTTT
* ** * * * *
49841 CCACCAATTTGT-GTAAAGT-ATGAGTTCGTTG-C-TC
125 GC-CTTATTT-TCATAAAATCA-AAG-T--TTGCCTTT
* * ** * ** *
49875 AAATGAGACAAACATGGATTCTTGT-AGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* *
49939 CATTCT-CTGC-TTCAGGATAAATGATATTGATGGTTTTCTTTTGCATAGAAATCTTTTTTTTTT
65 CATTCTCCT-CATT-AGGATAAATGATATTGATGG-TTTGTTTTGCATAGAAATC---TTTTCTT
* *
50002 TGCCTTATTTTCCTGAAAATCAAAGTTTGTACTTT
124 TGCCTTATTTTCAT-AAAATCAAAGTTTG-CCTTT
* ** * * * * *
50037 AAAGGAGACATGCATTGATTCTCATAAAAGTGTCCATTCTTTTCAAGATT-GCGAACCAAAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAG-GCACCATAAACA
* * ** * * * * * *
50101 CATTC-CCTTCATTAGGATACATGACATTGATACTTCGGTGT-CGTAAGTGAAGCTTTTCTTT-C
65 CATTCTCC-TCATTAGGATAAATGATATTGATGGTTTGTTTTGCAT-AG-AAATCTTTTCTTTGC
** *
50163 CAAAGTTATTGATAAAATCAAAGTTTGCCTCTT
127 CTTA-TT-TTCATAAAATCAAAGTTTGCCT-TT
* * * * * * * *
50196 AAATAAGACAAACA-TGAATACTCATACTAA-TCCCCATTCTTTTCTAGATTAGGCACCATAATC
1 AAATGAGACAAACATTG-ATTCTCGTA-AAAGTCTCCATTCATTTCAAGATTAGGCACCATAAAC
* * * * ** * * * * * *
50259 ATAGTCTTCC-CA-CACGGATACATGGCATTAATGCTTTGCTTTCGCA-AGATA-CGCTTTCTTC
64 ACATTC-TCCTCATTA-GGATAAATGATATTGATGGTTTG-TTTTGCATAGAAATC-TTTTCTTT
* ** * * * *
50320 CCACCAATTTGT-GTAAAGT-ATGAGTTCATTG-C-TC
125 GC-CTTATTT-TCATAAAATCA-AAG-T--TTGCCTTT
* * * ** * ** * *
50354 AAATGAGACAAACATGGGTTCTTGT-AGGGATCTTCATTCATTTCGTGATTAGGCTCTATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* *
50418 CATTCTCCAT-TTTAGGATAAATGATATTGATGGTTTTTTTTTGCAT-GAAAATCTTTTCTTTGC
65 CATTCTCC-TCATTAGGATAAATGATATTGATGG-TTTGTTTTGCATAG-AAATCTTTTCTTTGC
* *
50481 CTTATTTTCCTTAAAATCAAAGTTTGTACTTT
127 CTTATTTT-CATAAAATCAAAGTTTG-CCTTT
* ** * * *
50513 AAATGATACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA-T-GGCGAACAAAAAAC
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGC--ACCATAAAC
* * * * * * * *
50576 ATATTC-CCTTCATTAGGATACATGACAATGATGCTTTGCTGTCGCA-AGAGAACCTTTTCTTT-
64 ACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTG-TTTTGCATAGA-AATCTTTTCTTTG
* * * *
50638 CC-AACGTCATTGATAAAATCAAAGTCTGCCTCTT
126 CCTTA--T-TTTCATAAAATCAAAGTTTGCCT-TT
* * * ** * * * * **
50672 AAATAAAGA-AAA-TTTGAATACTTATACTAA-TCCCCATTCCTTTCAGGATTAGGCACTGTAAA
1 AAAT-GAGACAAACATTG-ATTCTCGTA-AAAGTCTCCATTCATTTCAAGATTAGGCACCATAAA
* * * * * * * * * * * ** *
50734 CATAGTATTCTTA-TACGGATACAGGATATTGGTGATTTGGTTT-CGTAAGAAA-CGCTT-TTTC
63 CACATTCTCCTCATTA-GGATAAATGATATTGATGGTTTGTTTTGCAT-AGAAATCTTTTCTTTG
* * * *
50795 CCATCAATTTT-TTAAAATTCTAAGTTTGTGCC-TC
126 CC-T-TATTTTCATAAAA-TCAAAG-TT-TGCCTTT
* * * * * * * *
50829 AAATGAGAGAAATATGGATTCTAGT-AAGGATCTTCATTCATTTCATGATTAGGCACTATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* * *
50893 CATTCTCCTCATTAGGATAAAAGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCT
65 CATTCTCCTCATTAGGATAAATGATATTGATGG-TTTGTTTTGCATAGAAATCTTTTCTTTGCCT
*
50958 TATTTTCCGTAAAATCAAAGTTTGCACTTT
129 TATTTT-CATAAAATCAAAGTTTGC-CTTT
** * * *
50988 AAATGAGACAGGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCACCATAAACAC
** * * * * * * * *
51053 ATTCTTTTCATTAGGATACAA-GACATTGATGCTTTGGTGT-CACAAGAGAAGCTTGTCTTTCCA
66 ATTCTCCTCATTAGGATA-AATGATATTGATGGTTTGTTTTGCA-TAGA-AATCTTTTCTTT--G
* * *
51116 CCGTGA--TTGATAGAATCAAAGTTTGCCTCTT
126 CC-TTATTTTCATAAAATCAAAGTTTGCCT-TT
* * * * * * * * * *
51147 AAATAAGCCAAACGTGGATACTCATACTAA-TCCCCATTCTTTTCTAGATTAGGCACCATAAACA
1 AAATGAGACAAACATTGATTCTCGTA-AAAGTCTCCATTCATTTCAAGATTAGGCACCATAAACA
* * * * * * * ** * **
51211 TAGTCTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAT-GATACGCTTTT-GTCCC
65 CATTCTCCTCATTA-GGATAAATGATATTGATGGTTT-GTTTTGCATAGA-AATCTTTTCTTTGC
** * * * *
51273 ACCAATTTGT-GTAAATTCTAAGTTCGTGCC-TC
127 -CTTATTT-TCATAAAATCAAAGTT--TGCCTTT
* ** * ** * * * *
51305 AAATGAGTCAAACAAGGATTCTAGT-ATGGATCGT-CATTCTTTTCTCA-ACTAGGCACTAT-AA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TC-TCCATTCATTTC-AAGATTAGGCACCATAAA
* * ** * * *
51366 CACAATCTCCTCATCAGGATGCATGATATTGATGGTCTTCTTTTGCATTGAAATCTTTTCATTGC
63 CACATTCTCCTCATTAGGATAAATGATATTGATGGT-TTGTTTTGCATAGAAATCTTTTCTTTGC
*
51431 CTTATTTTCCATAAATTCAAAGTTTGCACTTT
127 CTTATTTT-CATAAAATCAAAGTTTGC-CTTT
* ** * * * * *
51463 GAATGAGACATGCATTGATTCTCATAAAAGTGTCCATTCTTTTCAAGATTAGGAACCAAAAACAC
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCACCATAAACAC
* * * * * * * * *
51528 ATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA-AGAGAAGCTTGTCTTTCCA
66 ATTCTC-CTCATTAGGATAAATGATATTGATGGTTT-GTTTTGCATAGA-AATCTTTTCTTT--G
* * * *
51591 CCGTGA--TTGATAGAATCAAAG-TTGCCACTT
126 CC-TTATTTTCATAAAATCAAAGTTTGCC-TTT
* * * * * * ** *
51621 AAATAAGACAAACA-GGAATACTCATACTAA-TCCCCATTC-TTTCCTGGTTTAGGCACCATAAA
1 AAATGAGACAAACATTG-ATTCTCGTA-AAAGTCTCCATTCATTT-CAAGATTAGGCACCATAAA
* * * * * * * * * * *
51683 TC-TAGTCTTCTTA-TACAGATACATGATATTGATGTTTTGGTTTCGCA-AGATATGTTTTC-GT
63 -CACATTCTCCTCATTA-GGATAAATGATATTGATGGTTT-GTTTTGCATAGAAATCTTTTCTTT
* ** * * * *
51744 CCCACCAGTTTGT-GT-AAATTATAAGTCCGTGCC-TC
125 GCC-TTA-TTT-TCATAAAATCA-AAGT--TTGCCTTT
* * ** ** * * *
51779 AAATGAGACAAACATGGATTCTAGT-ATGGATCTTTATTCATTTCATGATTAGGAACTATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* ** * * * *
51843 CATTCTCCTCATCAGGATGCATGATGTTGATGGTCTTCTTTTGCATGGAAATCTTTTCTTTTCCT
65 CATTCTCCTCATTAGGATAAATGATATTGATGGT-TTGTTTTGCATAGAAATCTTTTCTTTGCCT
51908 TATTTTCCATAAAATCAAAGTTTGCTCTTT
129 TATTTT-CATAAAATCAAAGTTTGC-CTTT
** * * * *
51938 AAATGAGACATGCATTGATTCTTGAAAAAGTCTCCATTCTTTTCAAGATT--GCAAACCACAAAC
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGC--ACCATAAAC
* * * * * *
52001 ACATTC-CCTTCCTTAGGATACATGATATTGATGCTTTGTTGTCGC-GAGAGAAGCTTTTCTTT-
64 ACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTGTT-TTGCATAGA-AATCTTTTCTTTG
* *
52063 CC-AACGTTATTGATAAAATCAAAGTTTGCCTCTT
126 CCTTA--TT-TTCATAAAATCAAAGTTTGCCT-TT
* ** * * * * **
52097 AAATAAGGTAAAC-TTGAATACTCATACAAA-TC-CCTATTCCTTTCAGGATTAGGCACTGTAAA
1 AAATGAGACAAACATTG-ATTCTCGTA-AAAGTCTCC-ATTCATTTCAAGATTAGGCACCATAAA
* * * * * * * * *
52159 CATAGTCTTCTTA-TACGGATACAGGATATTGATGATTTGGTTTCGCA-AGAAA-CGCTTT-TTT
63 CACATTCTCCTCATTA-GGATAAATGATATTGATGGTTT-GTTTTGCATAGAAATC-TTTTCTTT
** * *
52220 -CCTATCAATTTTTTTAAATTCTAAGTTCGTGCC-TT
125 GCCT-T--ATTTTCATAAAATCAAAGTT--TGCCTTT
* * * * * **
52255 AAATGAGACAAACATGGATTCTAGT-AAGGATCTTCATTCATTTCATGATTAGGCATTATAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGCACCATAAACA
* * * * * * *
52319 CGTTCTTCTCATTCGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCATTGCCA
65 CATTCTCCTCATTAGGATAAATGATATTGATG-GTTTGTTTTGCATAGAAATCTTTTCTTTGCC-
52384 TT-TTTTCCATAAAATCAAAGTTTGCACTTT
128 TTATTTT-CATAAAATCAAAGTTTGC-CTTT
** * * * *
52414 AAATGAGACATGCATTGATTCTCGTTAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAC
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCACCATAAACAC
* * * * * * * * *
52479 ATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA-AGAGAAGCTTATCTTTCCA
66 ATTCTC-CTCATTAGGATAAATGATATTGATGGTTT-GTTTTGCATAGA-AATCTTTTCTTT--G
* * * *
52542 CCGTGA--TTGATAGAATCGAAG-TTGTCAC-TT
126 CC-TTATTTTCATAAAATCAAAGTTTG-C-CTTT
* * * * * * **
52572 AAATAAGACAAACA-GGAATACTCATACTAA-TCCCCATTC-TTTCCTTGATTAGGCACCATAAA
1 AAATGAGACAAACATTG-ATTCTCGTA-AAAGTCTCCATTCATTT-CAAGATTAGGCACCATAAA
* * * * * * * * *
52634 C-C-TTGTCTTCTTATACAGATACATGATATTGATGTTTTGGTTTCGCA-AGATA-CGTTTTC-G
63 CACATTCTCCTCAT-TA-GGATAAATGATATTGATGGTTT-GTTTTGCATAGAAATC-TTTTCTT
* ** * *
52694 TCCCACCAGTTTGT-GT-AAATTATAAG--T-CCGTTACT
124 TGCC-TTA-TTT-TCATAAAATCA-AAGTTTGCC-TT--T
* * ** * * * *
52729 CAAATGAGACAAACATGGATTCTAGT-ATGGATTTTCATTCATTTCATGATTA-GCAACTATAAA
1 -AAATGAGACAAACATTGATTCTCGTAAAAG-TCTCCATTCATTTCAAGATTAGGC-ACCATAAA
* ** * * *
52792 CACATTCTCCTCATCAGGATGCATGATGTTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGC
63 CACATTCTCCTCATTAGGATAAATGATATTGATGG-TTTGTTTTGCATAGAAATCTTTTCTTTGC
52857 CTTATTTTCCATAAAATCAAAGTTTGCTCTTT
127 CTTATTTT-CATAAAATCAAAGTTTGC-CTTT
** * * *
52889 AAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATT-GCGAACCAAAAACA
1 AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAG-GCACCATAAACA
* * * *
52953 CATTC-CCTTCATTAGGATACATGATATTGATGCTTTGTTGTCGCA-AGAGAAGCTTTTCTTT-C
65 CATTCTCC-TCATTAGGATAAATGATATTGATGGTTTGTT-TTGCATAGA-AATCTTTTCTTTGC
* *
53015 C-AACGTTATTGATAAAATCAAAGTTTGCCTCTT
127 CTTA--TT-TTCATAAAATCAAAGTTTGCCT-TT
* *
53048 AAATAAGGCAAAC-TTGA
1 AAATGAGACAAACATTGA
53065 ATACTCATAC
Statistics
Matches: 5803, Mismatches: 1800, Indels: 1311
0.65 0.20 0.15
Matches are distributed among these distances:
153 15 0.00
154 85 0.01
155 27 0.00
156 81 0.01
157 441 0.08
158 2097 0.36
159 2530 0.44
160 229 0.04
161 94 0.02
162 189 0.03
163 15 0.00
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (156 bp):
AAATGAGACAAACATTGATTCTCGTAAAAGTCTCCATTCATTTCAAGATTAGGCACCATAAACAC
ATTCTCCTCATTAGGATAAATGATATTGATGGTTTGTTTTGCATAGAAATCTTTTCTTTGCCTTA
TTTTCATAAAATCAAAGTTTGCCTTT
Found at i:53367 original size:400 final size:399
Alignment explanation
Indices: 52814--53597 Score: 1243
Period size: 400 Copynumber: 2.0 Consensus size: 399
52804 ATCAGGATGC
* * * * *
52814 ATGATGTTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAATCAAAG
1 ATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCATTGCCATATTTTCCATAAAATCAAAG
*
52879 TTTGCTCTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGCGAA
66 TTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGCGAA
* *
52944 CCAAAAACACATTCCCTTCATTAGGATACATGA-TATTGATGCTTTGTTGTCGCAAGAGAAGCTT
131 CCAAAAACACATTCCCTTCATTAGGATACATGACT-TTGATGCTTTGGTGTCACAAGAGAAGCTT
* * **
53008 TTCTTTCCAACGTTATTGATAAAATCAAAGTTTGCCTCTTAAATAAGGCAAACTTGAATACTCAT
195 TTCTTTCCAACGTTATAGATAAAATCAAAG-TTGCCTCTTAAATAAGACAAACACGAATACTCAT
* * * * *
53073 ACTAATCCTTATTCTTTTT-AGGATTAGGCACCGTAAACATAGTCTTCTTATACGGATACAGGGT
259 ACTAATCCCTATT-TTTTTCAGGATTAGGCACCATAAACATAGTCTGCTTATACGAATACAGGAT
* *
53137 ATTGATGATTTAGTTTCGCAAGAAACGCTTTTTTCCTA-TCAATTTTTTTAAATTCTAAGTTCAT
323 ATTGATGATTTAGTTTCGCAAGAAACGCTTTTTTCC-AGTCAATTTGTGTAAATTCTAAGTTCAT
53201 TTCATTCAGATAA
387 TTCATTCAGATAA
53214 ATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCATTGCCATATTTTCCATAAAATCAAAG
1 ATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCATTGCCATATTTTCCATAAAATCAAAG
*
53279 TTTGCACTTTAAATGAGACATGCATTGATTCTCGTTAAAGTCTCCATTCTTTTCAAGATTAG-GA
66 TTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATT-GCGA
*
53343 ACCAAAAACACATTCCTTTCATTAGGATACATGACTTTGATGCTTTGGTGTCACAAGAGAAGCTT
130 ACCAAAAACACATTCCCTTCATTAGGATACATGACTTTGATGCTTTGGTGTCACAAGAGAAGCTT
* * *
53408 TTCTTTCCACCGTTATAGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACACGAATACTCATA
195 TTCTTTCCAACGTTATAGATAAAATCAAAGTTGCCTCTTAAATAAGACAAACACGAATACTCATA
* *
53473 CTAATCCCTATTTTTTTCTGGATTAGGCACCATAAACATAGTCTGCTTATACGAATACATGATAT
260 CTAATCCCTATTTTTTTCAGGATTAGGCACCATAAACATAGTCTGCTTATACGAATACAGGATAT
* *
53538 TGATGATTTGGTTTCGTAAGAAACGCTTTTTTCCAGTCAATTTGTGTAAATTCTAAGTTC
325 TGATGATTTAGTTTCGCAAGAAACGCTTTTTTCCAGTCAATTTGTGTAAATTCTAAGTTC
53598 GTGCCTCAAA
Statistics
Matches: 352, Mismatches: 28, Indels: 9
0.90 0.07 0.02
Matches are distributed among these distances:
398 6 0.02
399 137 0.39
400 207 0.59
401 2 0.01
ACGTcount: A:0.30, C:0.17, G:0.14, T:0.38
Consensus pattern (399 bp):
ATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTCATTGCCATATTTTCCATAAAATCAAAG
TTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGCGAA
CCAAAAACACATTCCCTTCATTAGGATACATGACTTTGATGCTTTGGTGTCACAAGAGAAGCTTT
TCTTTCCAACGTTATAGATAAAATCAAAGTTGCCTCTTAAATAAGACAAACACGAATACTCATAC
TAATCCCTATTTTTTTCAGGATTAGGCACCATAAACATAGTCTGCTTATACGAATACAGGATATT
GATGATTTAGTTTCGCAAGAAACGCTTTTTTCCAGTCAATTTGTGTAAATTCTAAGTTCATTTCA
TTCAGATAA
Found at i:53911 original size:159 final size:157
Alignment explanation
Indices: 53271--54889 Score: 566
Period size: 158 Copynumber: 10.2 Consensus size: 157
53261 TTTTCCATAA
**
53271 AATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCGTTAAAGTCTCCATTCTTTTCAAG
1 AATCAAAGTTTGCACTTTAAATGAGACAAACATTGATTCTCG-TAAAGTC-CCATTCTTTTCAAG
* *
53336 ATTAGGAACCAAAAACACATTC-CTTTCATTAGGATACATGACTTTGATGCTTTGGTGTCACAAG
64 ATTAGGAACCAAAAACACATTCTC-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
*
53400 AGAAGCTTTTCTTTCCACCGTTA-TAGATAG
128 A-AAGCTTTTCTTTCCACCGTTATTTGATAG
* * * * * *
53430 AATCAAAG-TTG-TCTCTTAAATAAGACAAACA-CGAATACTCATACTAA-TCCCTATTTTTTTC
1 AATCAAAGTTTGCACT-TTAAATGAGACAAACATTG-ATTCTCGTA--AAGTCCC-ATTCTTTTC
** * * * * * * * *
53491 TGGATTAGGCACCATAAACATAGTCTGCTT-A-TACGAATACATGATATTGATGATTTGGTTTCG
61 AAGATTAGGAACCAAAAACACATTCT-CTTCATTA-GGATACATGACATTGATGCTTTGGTGTCG
* * *
53554 TAAGAAACGC-TTT-TTTCCA--GTCAATTTGTGTA-
124 CAAGAAA-GCTTTTCTTTCCACCGT-TATTTG-ATAG
* * * * * * *
53586 AATTCTAAGTTCGTGC-C-TCAAATGAGAGAAACATGGATTCTAGTAAGGATCCTCATTCATTTC
1 AA-TCAAAGTT--TGCACTTTAAATGAGACAAACATTGATTCTCGTAAAG-TCC-CATTCTTTTC
* * * * * * * * * * ** * *
53649 ATGATTAGGCACTATAAACACATTCTCCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGCA
61 AAGATTAGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* * * * *
53714 TCGAAATCTTTTCTTT--GCC-TTATTTTCCATAA
126 -AGAAAGCTTTTCTTTCCACCGTTA-TTT-GATAG
** *
53746 AATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCGTAATAGTCTCCAGTCTTTTCAAG
1 AATCAAAGTTTGCACTTTAAATGAGACAAACATTGATTCTCGTAA-AGTC-CCATTCTTTTCAAG
* * *
53811 ATTAGGAACCAAAAACACATTC-CTTTGATTAAGATACTTGACATTGATGCTTTGGTGTCGCAAG
64 ATTAGGAACCAAAAACACATTCTC-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
53875 AGAAGCTTTTCTTTCCACCGTTA-TTGATAG
128 A-AAGCTTTTCTTTCCACCGTTATTTGATAG
* * * * * *
53905 AATCAAAG-TTG-TCTCTTAAATAAGACAAACA-CGAATACTCATACTAA-TCCCCATTTTTTTC
1 AATCAAAGTTTGCACT-TTAAATGAGACAAACATTG-ATTCTCGTA--AAGT-CCCATTCTTTTC
** * * * * * * *
53966 TGGATTAGGCACCATAAACATAGTCTGCTT-A-TACGGATACATGATATTGATGATTTGGTTTCG
61 AAGATTAGGAACCAAAAACACATTCT-CTTCATTA-GGATACATGACATTGATGCTTTGGTGTCG
* * *
54029 TAAGAAACGC-TTT-TTTCCA--GTCAATTTGTGTA-
124 CAAGAAA-GCTTTTCTTTCCACCGT-TATTTG-ATAG
* * * * * * * *
54061 AATTCTAAGTTCGTGC-C-TCAAATGAGAGAAACATGGATTCTAGTAAGGATCTTCATTCATTTC
1 AA-TCAAAGTT--TGCACTTTAAATGAGACAAACATTGATTCTCGTAAAG-TC-CCATTCTTTTC
* * * * * * * * * * * * * ** * *
54124 ATGATTAGGCACTATAAGCACGTTCTCCTCATGAGCATGCAGGATATTGATGGTTTTCTTTTGCA
61 AAGATTAGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* * * * *
54189 TGGAAATCTTTTCTTT--GCC-TTATTTTCCATAA
126 -AGAAAGCTTTTCTTTCCACCGTTA-TTT-GATAG
* * ** ** *
54221 AATCTAAGTCTAAACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTTCAAG
1 AATCAAAGTTTGCACTTTAAATGAGACAAACATTGATTCTCGT-AAAGTC-CCATTCTTTTCAAG
* *
54286 ATTAGGAACCAAAAACACATTC-CTTTCCTTAGGATACATGACATTGATGCTTTGGGGTCGCAAG
64 ATTAGGAACCAAAAACACATTCTC-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* *
54350 AGAAGCTTTTCTTTCAACCGTTA-TAGATAG
128 A-AAGCTTTTCTTTCCACCGTTATTTGATAG
* * * * * * *
54380 AATCAAAG-TTG-TCTCTTAAATAAGATAAACA-CGAATACTCATACTAA-TCCCCATTTTTTTC
1 AATCAAAGTTTGCACT-TTAAATGAGACAAACATTG-ATTCTCGTA--AAGT-CCCATTCTTTTC
* * * * * * * * *
54441 TAGATTAGGCACCATAAACATAGTCTGCTT-A-TACGGATACAAGATATTGAAGCTTTGGTTTCG
61 AAGATTAGGAACCAAAAACACATTCT-CTTCATTA-GGATACATGACATTGATGCTTTGGTGTCG
* * *
54504 CAAGATACGC-TTTCTTCCCACC--AATTTG-TGCAG
124 CAAGA-AAGCTTTTCTTTCCACCGTTATTTGAT--AG
* * ** * ** * *
54537 AGT-ATGAG-TT-CA-TTGCTCAAATGAGACAAACAGGGATTCTTGTAGGGATCTTCATTCATTT
1 AATCA-AAGTTTGCACTT--T-AAATGAGACAAACATTGATTCTCGTAAAG-TC-CCATTCTTTT
* ** * * * ** * * * * * * ** * *
54598 CATGATTAGCCACTATAAACCCATTCTCCGCTTTAGGATAAATGATATTCACGGTTTTCTTTTGC
60 CAAGATTAGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
* * ** *
54663 ATGGAAATCTTTTC-TT--AGCC-TTATTTTCCTTAA
125 A-AGAAAGCTTTTCTTTCCA-CCGTTA-TTT-GATAG
* **
54696 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
1 AATCAAAGTTTGCACTTTAAATGAGACAAACATTGATTCTCGT-AAAGTC-CCATTCTTTTCAAG
* * * *
54761 ATTAAGAACCAAAAACACATTCTCTTCATTAGGATACTTGACATTGATGCTTTGTTGTCACAAGA
64 ATTAGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * *
54826 GAAGCTTTTCTTTCCAACGTT-GTTGATAT
129 -AAGCTTTTCTTTCCACCGTTATTTGATAG
* * *
54855 AATCAATGTTTGC-CTCTTAAATAAGGCAAAC-TTGA
1 AATCAAAGTTTGCACT-TTAAATGAGACAAACATTGA
54890 ATAGTCATAC
Statistics
Matches: 1042, Mismatches: 299, Indels: 239
0.66 0.19 0.15
Matches are distributed among these distances:
154 4 0.00
155 5 0.00
156 28 0.03
157 76 0.07
158 484 0.46
159 389 0.37
160 38 0.04
161 7 0.01
162 11 0.01
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.35
Consensus pattern (157 bp):
AATCAAAGTTTGCACTTTAAATGAGACAAACATTGATTCTCGTAAAGTCCCATTCTTTTCAAGAT
TAGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAA
GCTTTTCTTTCCACCGTTATTTGATAG
Found at i:57311 original size:158 final size:157
Alignment explanation
Indices: 55160--67606 Score: 3838
Period size: 158 Copynumber: 78.8 Consensus size: 157
55150 AGTTTAAACT
** * * * * *
55160 TTAAATGAGACATGCATTGATTCTCGTAAC-AGTCTCCATTATTTT-TAAGATTAGGAACCAAAA
1 TTAAATGAGACAAACATTGATTCTCAT-ACTAATCTCCATTCTTTTCT-AGATTAGGCACCATAA
* * * * * * * *
55223 ACACATACCTT-TCATTA-GCATACATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTGTCTT
64 ACACAT-TCTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
*
55286 TCCACCGTTATTGATAAAATCAAAGTTGTCTC
127 TCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * * *
55318 TCAAATAAGACAAACA-TGAATACTCAAACTAATCCCCATTCTTTTCTTGATTAGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * ** * * * * *
55382 CATAGTCTTCTTATAAAGATATATGATATTGATGCTTTAGTTTCGCAAGATACGC-TTTCTTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* * * *
55446 ACTAATTTTTG-TAAATTCTAAGT-TCGTACC
130 AC-CATTATTGATAAAATCAAAGTGTC-T--C
* * ** *** * * * *
55476 TCAAATGAGACAAGC-TTGGATTCTGGTAAGGATCTTCATTCATTTC-ATGATTTGGCACTATAA
1 TTAAATGAGACAAACATT-GATTCTCATACTAATCTCCATTCTTTTCTA-GATTAGGCACCATAA
* * * * * ** * * * *
55539 ACACGTTCTCCTCAT-CAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
64 ACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT
** * * *
55603 GCC-TTATT-TTCCATAAAATGAAAGTTTAAACT-
128 -CCACCATTATT-GATAAAATCAAAGTGT---CTC
** * * * * * *
55635 TTAAATGAGACATGCATTGATTCTCGTA-AAAGTGTCCATTCTTTTCAAGATTAGGAACCAAAAA
1 TTAAATGAGACAAACATTGATTCTCATACTAA-TCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * *
55699 CACATTCCTT-TCATTA-GGATACATGACATCGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
65 CACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT
* * *
55762 CCACCGTTATAGATAGAATCAAAGTTGTCTC
128 CCACCATTATTGATAAAATCAAAG-TGTCTC
* * * *
55793 TTAAATAAGACAAACA-GGAATACTCATACTAATCCCCATT-TTTTCTAGATTAGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
*** ** * * * * * * * *
55856 TGTAGCCTACTTATATGGATACAAGATATTGAAGCTTTGGTTTCCCAAGATATGC-TTTCTTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* * * *
55920 ACCAATT-TGTG-CAGAGT-ATGAGT-TCATTGC
130 ACC-ATTAT-TGATAAAATCA-AAGTGTC--T-C
* ** ** *** * * *
55950 TCAAATGAGACAAACAGGGATTCTTGTAGGGATCTTCATTCATTTCGT-GATTAGGCACTATAAA
1 TTAAATGAGACAAACATTGATTCTCATACTAATCTCCATTCTTTTC-TAGATTAGGCACCATAAA
* * * * ** * * * * *
56014 CACATTCTCCGCTT-TA-GGATAGATGATATTCATGGTTTTCTTTTGCATGGAAATCTTTTCCTA
65 CACATTCT--TCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTT-CTT
* ** **
56077 GCC-TTATT-TTCCTTAAAATCAAAGTTTGTACT-
127 TCCACCATTATT-GATAAAATCAAAG--TGT-CTC
*** * * * * *
56109 TTAAATGAGACTTGCATTGATTCTCATA-AAAGTCTCCATTCTTTTCAAGATTACGAACCAAAAA
1 TTAAATGAGACAAACATTGATTCTCATACTAA-TCTCCATTCTTTTCTAGATTAGGCACCATAAA
* *
56173 CACATTCCCTTCATTA-A--GATACATGACATTGATGCTTT-GTTGTCGCAAGAGAAGCTTTTCT
65 CACATT--CTTC-TTATACGGATACATGATATTGATGCTTTGGTT-TCGCAAGAAAAGCTTTTCT
* * * * *
56234 TTCCAACGTTATTCATAAAATCACAGTTTGCCTC
126 TTCCACCATTATTGATAAAATCAAAG--TGTCTC
* * ** * * * * *
56268 TTAAATAAGGCAAAC-TTGAAAACTCATGCTAATCCCCATTCCTTTC-AGGATTATGCACCGTAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTA-GATTAGGCACCATAA
* * * * * * * * *
56331 ACACAGTCTTCTAATACGAATACAGGATATTGAAGGTTTGGTTTTGCAAGAAACGGTTTTTTCTT
64 ACACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAA-AG-CTTTTCTT
* * *
56396 AT-CA--ATTTTTG-TAAATTCTAAGT-TCGTGCC
127 -TCCACCATTATTGATAAAATCAAAGTGTC-T--C
* * *** * * *
56426 TCAAATGAGACAAACA-TGCATGCT-AGTAAGGATCTTCATTCATTTC-ATGATTAGGCACTATA
1 TTAAATGAGACAAACATTG-ATTCTCA-TACTAATCTCCATTCTTTTCTA-GATTAGGCACCATA
* * * * * ** * * * *
56488 AACACATTCTCCTCGAT-CGGATAAATGATATTGAAGATTTTCTTTTGCATGGAAATCTTTTCTT
63 AACACATTCTTCT-TATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
** * * * *
56552 TGCC-TTATT-TTCTATAAAATCAAAATTTTCAC
127 T-CCACCATTATT-GATAAAATC-AAAGTGTCTC
** * * * * *
56584 TTTAAATGAGACATGCATTGAGTCTCATA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCATACTAA-TCTCCATTCTTTTCTAGATTAGGCACCATAA
* * * * * * *
56648 ACACATACCT-TTATTA-GCATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTT
64 ACACATTCTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT
* *
56711 CCACCGTTATTGATAGAATCAAAGT-TCTC
128 CCACCATTATTGATAAAATCAAAGTGTCTC
* * * *
56740 TTAAGTAAGACAAACA-TGAATACTCATACTAATCCCCATTCTTTTCTAGATTAGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * ** * * * * *
56804 CATAGTCTCCTTATAAAGATATATGATATTGATGCTTTAGTTTCGCAAGATACGC-TTTCTTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* * *
56868 ACTAATTTTTG--AAAATTATAAGT-TCGTACC
130 AC-CATTATTGATAAAATCA-AAGTGTC-T--C
** * * * * * * *
56898 TCGAATGAGACAAACATGGATTCTGGA-A-AAGATCTTCATTCATTTC-AGGATTTGGCACTATA
1 TTAAATGAGACAAACATTGATTCT-CATACTA-ATCTCCATTCTTTTCTA-GATTAGGCACCATA
* * * * * * ** * * * *
56960 AACGCATTCTCCTCATAAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
63 AACACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT
** * *
57025 GCC-TTATT-TTCCG-TAAAATCAAAGTTTGCAC
128 -CCACCATTATT--GATAAAATCAAAGTGT-CTC
** * * * * *
57056 TTTAAATGAGACAGGCATTGATTCTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCATACTAA-TCTCCATTCTTTTCTAGATTAGGCACCATAA
* * * * *
57120 ACACATTCCTT-TCATTA-GGATACATTACATTGATGCTTTGGTGTCGCAAGAAAAGCTTGTCTT
64 ACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
* *
57183 TCCACCGTTATTGATAGAATCAAAGCTGTCTC
127 TCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * *
57215 TTAAATAAGACAAACA-GGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * * * * *
57279 C-CTAGTCTTCTTATACGGATACATGATATTGATGCTTCGGTTTCGTAAGATACG-GTTTCGTCC
65 CAC-ATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC
* * **
57342 CACCACTT-TGTG-CAAATTTTAAGTCCGTGC-C
129 CACCA-TTAT-TGATAAAATCAAAGT--GT-CTC
* * * * * *
57373 TCAAATGAGACAAACATGGATTCT-AGTA-TGGATCTTCATTCATTTC-ATGATTAGGCACTATA
1 TTAAATGAGACAAACATTGATTCTCA-TACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATA
* * * ** * *
57435 AACACATTC-TCTTCAT-CAGCATGCATGATATTGATGGTTTTCTTTTGCATAG-AAATCTTTTC
63 AACACATTCTTCTT-ATAC-GGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAAGCTTTTC
* * *
57497 TTT--ACC-TTAATTTCCATAAAAAT-AAAGTTTGCAC
125 TTTCCACCATT-A-TT-GAT-AAAATCAAAGTGT-CTC
** * * * * * * * *
57531 TTTAAATGAGACATGCATTGACTCT-AGTAATAGTCTCCATTCTTTTCAAGAATAGGAACAAAAA
1 -TTAAATGAGACAAACATTGATTCTCA-TACTAATCTCCATTCTTTTCTAGATTAGGCACCATAA
* * * *
57595 ACACATTCTT-TTCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTT
64 ACACATTCTTCTT-A-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
*
57658 TCCACCATTATTGATAGAATCAAAGCTGTCTC
127 TCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * *
57690 TTAAATAAGACAAACA-GGAATACTCATACTAATCCCCATTCTTTTCTAGATTAGGCACCCTAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * * * * * *
57754 CATAGTCTTCTTATTCAGATACATGATATTGAAGCTTTGGTTTCGTAAGATACGC-TTTCTTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* *
57818 ACCAATT-TGTG-TAAATTCTAAGT-TCGTGCC
130 ACC-ATTAT-TGATAAAATCAAAGTGTC-T--C
* * * * * * *
57848 TCAAATGAGACAAACATGGATTCT-AGTA-TGGATCTTCATTCATTTC-ATGATTACGCACTATA
1 TTAAATGAGACAAACATTGATTCTCA-TACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATA
* * * * * ** * * * *
57910 AACACAATCTCCTCAT-CAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
63 AACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
** * * * *
57974 TGCC-TTATT-TTCCATAAAATGAAAGTTTGCAC
127 T-CCACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * * *
58006 TTTAAATGAGACATGCATTGATTCTCGTAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAA
1 -TTAAATGAGACAAACATTGATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * *
58071 CACATTCCTTTCATTA-A--GATACTTGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTT
65 CACATT-C-TTC-TTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
* *
58133 TCCACCGTTATTGATAGAATCAAAGTTGTCTC
127 TCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * *
58165 TTAAATAAGACAAACA-GGAATACTCATACTAATCCCCATTCTTTTCTAGATTAGGCACCCTAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * * * * * *
58229 CATAGTCTTCTTATTCAGATACATGATATTGAAGCTTTGGTTTCGTAAGATACGC-TTTCTTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* *
58293 ACCAATT-TGTG-TAAATTCTAAGT-TCGTGCC
130 ACC-ATTAT-TGATAAAATCAAAGTGTC-T--C
* * * * * *
58323 TCAAATGAGACAAACATGGATTCT-AGTA-TGGATCTTCATTCATTTC-ATGATTAGGCACTATA
1 TTAAATGAGACAAACATTGATTCTCA-TACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATA
* * * * * ** * * *
58385 AACACATTCTCCTCAT-CAGGATGCACGATATTGATGGTTTTCCTTT-GCATGGAAATCTTTTCT
63 AACACATTCTTCTTATAC-GGATACATGATATTGAT-GCTTTGGTTTCGCAAGAAAAGCTTTTCT
** * * *
58448 TTGCC-TTATT-TTCCATAAAATCAAAGTTTGCAC
126 TT-CCACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * * *
58481 TTTAAATGAGACATGCATTGATTGTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCATACTAA-TCTCCATTCTTTTCTAGATTAGGCACCATAA
* * * * ** * * *
58545 ACACATTCCTT-TTATTA-GGATACAGGACAATGTTGCTTTGGGGTCGCAAGAGAAGCCTGTCTT
64 ACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
* ** *
58608 TCCACCGTTATTGATGGAATCGAAGTTTGTCTC
127 TCCACCATTATTGATAAAATCAAAG--TGTCTC
* * *
58641 TTAAATAAGACAAACA-TGAATACTCATACTAATCCCCATTCTTTTCTAGATTAGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
** * * * * *
58705 CTTAGTCTTCTTATATGGATACATGATATTGATGCTTTGGTGTCGCAAGATACGC-TTTC-TTCT
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-
* *
58768 CACCAATT-TGTG-TAAAGT-ATGAGT-TCATTGC
129 CACC-ATTAT-TGATAAAATCA-AAGTGTC--T-C
* ** *** *** * * *
58799 TCAAATGAGACAAACAGGGATTCTTGCAGGGATCTTCATTCATTTCGT-GATTAGGCACTATAAA
1 TTAAATGAGACAAACATTGATTCTCATACTAATCTCCATTCTTTTC-TAGATTAGGCACCATAAA
* * * * * ** * * * * *
58863 CATATTCTCCGCTT-TA-GGATAAATGATATTCATGGTTTTCTTTTGCATGGAAATCTTTTCCTA
65 CACATTCT--TCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTT-CTT
* * *
58926 T-CA--ATTTTTG-TAAATTCTAAGT-TCATGCC
127 TCCACCATTATTGATAAAATCAAAGTGTC-T--C
* * * *** * * *
58955 TCAAATGAGGCAAACA-TGCATGC-CAGTAAGGATCTTCATTCATTTC-ATGATTAGGCACTATA
1 TTAAATGAGACAAACATTG-ATTCTCA-TACTAATCTCCATTCTTTTCTA-GATTAGGCACCATA
* * * * ** * * * *
59017 AACACATTCTCCTCGAT-CGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTT
63 AACACATTCTTCT-TATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
* * * *
59081 TGCC-CTATT-TTCTATAAAATCAAAGTTTTCAC
127 T-CCACCATTATT-GATAAAATCAAAG-TGTCTC
** * * * * * *
59113 TTTAAATGAGACATGCATTGATTCTCGTA-AAAGTCTCCAATCTTTTCAAGATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCATACTAA-TCTCCATTCTTTTCTAGATTAGGCACCATAA
* * * * * * *
59177 ACACATACTAT-TCATTA-GCATACATGACATTGATGCTTTGGGGTT-GCAAGAGAAGCTTGTCT
64 ACACATTCT-TCTTA-TACGGATACATGATATTGATGCTTT-GGTTTCGCAAGAAAAGCTTTTCT
* *
59239 TTCCACCGTTATTGATAGAATCAAAGTTGTCTC
126 TTCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * * *
59272 TTAAATAAGACAAACA-GGAATACTCATACTAATC-CCTATTTTTTTCTGGACTAGGCACCATAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCC-ATTCTTTTCTAGATTAGGCACCATAA
* * ** * * * * * * *
59335 ACATAGTCTTCTTATAAAGATATATGATATTGATGGTTTAGTTTCGCATGATATGC-TTTCTTCC
64 ACACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC
* * * *
59399 CACTAATTTTTGA-AAATTCTAAGT-TCGTAC
129 CAC-CATTATTGATAAAATCAAAGTGTC-T-C
** ** *** * * *
59429 TTCAAATGAGACAAACAAGGATTCTGGTAAGGATCTTCATT-TATTTC-ATGATTTGGCACTATA
1 TT-AAATGAGACAAACATTGATTCTCATACTAATCTCCATTCT-TTTCTA-GATTAGGCACCATA
* * ** * * ** * ** * *
59492 AACACATTCTCCTCATAATGATGCATGATATTGATGGTTTTCTTTTGCGTGGAAATCTTTTCTTT
63 AACACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT
** * * *
59557 GCC-TTATT-TTCCATAAAATCAAAGTTTGCAC
128 -CCACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * *
59588 TTTAAATGAGACATGCAATGATTCTCATAGC-AGTCTCCATTCTTTTCAAGAATT-GGAACCAAA
1 -TTAAATGAGACAAACATTGATTCTCATA-CTAATCTCCATTCTTTTCTAG-ATTAGGCACCATA
* * ** * * *
59651 AACACATTTCTT-TCATTA-GGATACATGACATTGATGCTTTGGGGTCGCAAGAGAAGCTTGTGT
63 AACACA-TTCTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCT
* *
59714 TTCCACCGTT-TATGATAGAATC-AAGTTGTCTC
126 TTCCACCATTAT-TGATAAAATCAAAG-TGTCTC
** * * * * * *
59746 TTAAAAAAGACAAACA-GGAATACCCATACTAGTCCCCATTCTTTTCTGGATTAGGCACCAT-AA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * *
59809 -ACATTGACTTTTTATACGGATACATGATATTGAGGCTTTGGTTTCGGAAGATACA-C-TTTCGT
65 CACATT--CTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGA-AAAGCTTTTCTT
* * *
59871 CCCACCAATT-TGTG-TAAAATCTAAGTCCG-CGCC
127 TCCACC-ATTAT-TGATAAAATCAAAGT--GTC-TC
* ** * * * * *
59904 TCAAATGAGACAAACAAGGATTCT-AGTA-TGGATCTTCACTCATTTC-ATGATTAGGCACTATA
1 TTAAATGAGACAAACATTGATTCTCA-TACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATA
* ** * * ** * * *
59966 AACACATTCTCCTCCT-CAGGATGCATGATATTGATGGTTTTCTTTTGCATCG-AAATCTTTTCT
63 AACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAAGCTTTTCT
** * * *
60029 TTGCC-TTATT-TTCCATAAAATCAAAGTTTGCAC
126 TT-CCACCATTATT-GATAAAATCAAAGTGT-CTC
* ** * * * * *
60062 TTTAAATGCGACATGCATTGATTCTCGTAAC-AGTCTCCATTCTTTTCAAGATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCAT-ACTAATCTCCATTCTTTTCTAGATTAGGCACCATAA
* * ** * * *
60126 ACACATTCCTT-TCATTA-GGATACATGACATTGATGCTTTGGGGTCGCAAGAGAAGCTTGTGTT
64 ACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
* *
60189 TCCACCATTATTGATAGAATCAAAGTTGTCTT
127 TCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * * *
60221 TTAAATCAGACAAACA-TGAATACTCTTACTAATCCCCATTCTTTTCTGGATTTGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * * * *
60285 CATAGTCTTTTTATATGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTT-TTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* *
60349 ACCAATT-TGTG-TAAAATCTAAGT-TCGCGCC
130 ACC-ATTAT-TGATAAAATCAAAGTGT--C-TC
* * ** ** * * * * *
60379 TCAAAGGAGACAAACAAGGATTCTGGTA-TGGATCTTCAATCATTTC-ATGATTAGGCACTATAA
1 TTAAATGAGACAAACATTGATTCTCATACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATAA
* ** * * * ** * * *
60442 ACACATTC-TCCTCCACAGGATGCAAGATATTGATGGTTTTCTTTTGCATCGAAAA-ATTTTCTT
64 ACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAAGCTTTTCTT
** * * * *
60505 TGCC-TTATTTTTCATAAAATCAAAGTTTGCATT
127 T-CCACCATTATTGATAAAATCAAAGTGT-C-TC
** * * * * * *
60538 TTAAATGAGACATGCATTGATTCTCGTAAC-AGTTTCCATTCTTTTCAAGATTAGGAACCAAAAA
1 TTAAATGAGACAAACATTGATTCTCAT-ACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * ** * * *
60602 CACATTCCTT-TCATTA-GGATACATGACATTGATGCTTTGGGGTCGCAAGAGAAGCTTGTGTTT
65 CACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT
* *
60665 CCACCATTATTGATAGAATCAAAGTTGTCTT
128 CCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * * *
60696 TTAAATCAGACAAACA-TGAATACTCTTACTAATCCCCATTCTTTTCTGGATTTGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * * * *
60760 CATAGTCTTTTTATATGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTT-TTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* *
60824 ACCAATT-TGTG-TAAAATCTAAGT-TCGCGCC
130 ACC-ATTAT-TGATAAAATCAAAGTGT--C-TC
* * ** ** * * * * *
60854 TCAAAGGAGACAAACAAGGATTCTGGTA-TGGATCTTCAATCATTTC-ATGATTAGGCACTATAA
1 TTAAATGAGACAAACATTGATTCTCATACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATAA
* ** * * * ** * * *
60917 ACACATTC-TCCTCCACAGGATGCAAGATATTGATGGTTTTCTTTTGCATCGAAAA-ATTTTCTT
64 ACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAAGCTTTTCTT
** * * * *
60980 TGCC-TTATTTTTCATAAAATCAAAGTTTGCATT
127 T-CCACCATTATTGATAAAATCAAAGTGT-C-TC
** * * * * * *
61013 TTAAATGAGACATGCATTGATTCTCGTAAC-AGTTTCCATTCTTTTCAAGATTAGGAACCAAAAA
1 TTAAATGAGACAAACATTGATTCTCAT-ACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * *
61077 CACATTCCTT-TCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTT
65 CACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT
*
61140 CCACCATTATTGATAGAATCAAAGCTGTCTC
128 CCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * * *
61171 TTAAATAAGACAAACA-GGAATACTCATACTAATCCCCATTCTTTTCTTGGTTAGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * * * * *
61235 C-CTAGTCTTCTTATACGGATACATGATATTGATGCTTCGGTTTCGTAAGATACG-GTTTCGTCC
65 CAC-ATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC
** *
61298 CACCACTT-TGTGCA-AATTTTAAA-TCCGTGC-C
129 CACCA-TTAT-TG-ATAAAATCAAAGT--GT-CTC
* * * * * *
61329 TCAAATGAGACAAACATGGATTCT-AGTA-TGGATCTTCATTCATTTC-ATGATTAGGCACTATA
1 TTAAATGAGACAAACATTGATTCTCA-TACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATA
* * * * * ** * * *
61391 AACACATTCTCCTCAT-CAGGATGCACGATATTGATGGTTTTCCTTT--TAATGGAAATCTTTTC
63 AACACATTCTTCTTATAC-GGATACATGATATTGAT-GCTTTGGTTTCGCAA-GAAAAGCTTTTC
* * *
61453 TTTGCCTA--ATT-TTCCATAAAATCAAAGTTTGCAC
125 TTT-CC-ACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * * *
61487 TTTAAATGAGACATGCATGGATTCT-AGTA-TGGATCTTCATTCGTTTC-ATGATTACGCACTAT
1 -TTAAATGAGACAAACATTGATTCTCA-TACT-AATCTCCATTCTTTTCTA-GATTAGGCACCAT
* * * * * * ** * * *
61549 AAACACAATCTCCTCATTA-TGATGCATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCT
62 AAACACATTCTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCT
** * * * * *
61613 TTGCC-TTATT-TTCCATAATATGAAAGTTTGCAC
126 TT-CCACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * * * *
61646 TTTAAATGAGACATGCATTGATTCTCGTAATAGTCTCCATTCTTTTCAAGATTAGGAACAAAAAA
1 -TTAAATGAGACAAACATTGATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * *
61711 CACATTATT-TTCAT-CAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTT
65 CACATTCTTCTT-ATAC-GGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT
* * *
61774 CCACCGTTATTGATAGAATTAAAGT-TCTC
128 CCACCATTATTGATAAAATCAAAGTGTCTC
* * * * *
61803 TTAAATAAGACAAACA-GGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * *
61867 CATAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATATGC-TTTCTTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* *
61931 ACCAATT-TGTG-TAAATTCTAAGT-TCATGCC
130 ACC-ATTAT-TGATAAAATCAAAGTGTC-T--C
* * * * * *
61961 TCAAATGAGACAAACATGGATTCT-AGTA-TGGATCTTCATTCATTTC-ATGATTAGGCACTATA
1 TTAAATGAGACAAACATTGATTCTCA-TACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATA
* * * * * ** * * *
62023 AACACATTCTCCTCAT-CAGGATGCACGATATTGATGGTTTTCCTTT--TAATGGAAATCTTTTC
63 AACACATTCTTCTTATAC-GGATACATGATATTGAT-GCTTTGGTTTCGCAA-GAAAAGCTTTTC
* * *
62085 TTTGCCTA--ATT-TTCCATAAAATCAAAGTTTGCAC
125 TTT-CC-ACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * * *
62119 TTTAAATGAGACATGCATTGATTGTCGTA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCATACTAA-TCTCCATTCTTTTCTAGATTAGGCACCATAA
* * * * *** * * *
62183 ACACATTCCTT-TTATTA-GGATACAGGACAATGTTGCTTTGGGGGCGCAAGAGAAGCCTGTCTT
64 ACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
* * ** *
62246 TCCATCGTTATTGATGGAATCGAAGTTTGTCTC
127 TCCACCATTATTGATAAAATCAAAG--TGTCTC
* * * *
62279 TTAAATAAGACAAACA-TGAATACTCATGCTAATCCCCATTCTTTTCTAGATTAGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
*** * * * * *
62343 TTTAGTCTTCTTATATGGATACATGGTATTGATGCTTTGGTTTCGCAAGATACGC-TTTC-TTCT
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-
* *
62406 CACCAATT-TGTG-TAAAGT-ATGAGT-TCATTGC
129 CACC-ATTAT-TGATAAAATCA-AAGTGTC--T-C
* ** ** *** * * *
62437 TCAAATGAGACAAACAGGGATTCTTGTAGGGATCTTCATTCATTTC-ATGATTAGGCACTATAAA
1 TTAAATGAGACAAACATTGATTCTCATACTAATCTCCATTCTTTTCTA-GATTAGGCACCATAAA
* * * * ** * * * * *
62501 CACATTCTCCGCTT-TA-GGATAAATGATATTCATGGTTTTCTTTTGCATGGAAATCTTTTCCTA
65 CACATTCT--TCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTT-CTT
* * *
62564 T-CA--ATTTTTG-TAAATTCTAAGT-TCGTGCC
127 TCCACCATTATTGATAAAATCAAAGTGTC-T--C
* ** * *** * * *
62593 TCAAATGATTCAAACA-TGCATGCT-AGTAAGGATCTTCATTCATTTC-ATGATTAGGCACTATA
1 TTAAATGAGACAAACATTG-ATTCTCA-TACTAATCTCCATTCTTTTCTA-GATTAGGCACCATA
* * * * ** * * * *
62655 AACACATTCTCCTCGAT-CGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTT
63 AACACATTCTTCT-TATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
* * * *
62719 TGCC-CTATT-TTCTATAAAATCAAAGTTTTCAC
127 T-CCACCATTATT-GATAAAATCAAAG-TGTCTC
** * * * *
62751 TTTAAATGAGACATGCATTGATTCTCGTA-AAAGTCTCCATTCTTTT-TAAGATTAGGAACCAAA
1 -TTAAATGAGACAAACATTGATTCTCATACTAA-TCTCCATTCTTTTCT-AGATTAGGCACCATA
* * * * * * * *
62814 AACACATACCTT-TCATTA-GCATACACGACATTGATGCTTTGGGGTT-GCAAGAGAAGCTTGTC
63 AACACAT-TCTTCTTA-TACGGATACATGATATTGATGCTTT-GGTTTCGCAAGAAAAGCTTTTC
* * *
62876 TTTCCACCGTTATTGATAGAATCAAAGTTGTCTT
125 TTTCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * *
62910 TTAAATAAGACAAACA-TGAATACTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * ** * * * * * *
62974 CATAGTCTTCTTATAAAGATATATGATATTGATGCTTTAGTTTCGCATGATACGC-TTTCTTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* * * *
63038 ACTAATTTTTGA-AAATTCTAAGT-TCGTACC
130 AC-CATTATTGATAAAATCAAAGTGTC-T--C
* * ** *** * * * *
63068 TCAAATGAGACAAACATGGATTCTGGTAAGGATCTTCATTCATTTC-ATGATTTGGCACTATAAA
1 TTAAATGAGACAAACATTGATTCTCATACTAATCTCCATTCTTTTCTA-GATTAGGCACCATAAA
* * * * * ** * ** * *
63132 CACATTCTCCTCATAAGGATGCATGATATTGATGGTTTTCTTTTGCGTGGAAATCTTTTCTTTGC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-C
** * * *
63197 C-TTATT-TTCCATAAAATCAAAGTTTGCAC
129 CACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * *
63226 TTTAAATGAGACATGCAATGATTCTCATAGC-AGTCTCCATTCTTTTCAAGAATT-GGAACCAAA
1 -TTAAATGAGACAAACATTGATTCTCATA-CTAATCTCCATTCTTTTCTAG-ATTAGGCACC-AT
* * * ** * * * *
63289 AAACACATTTCTTCAT-TA-GGATACTTGACATTGATGCTTTGGGGTCACAAGAGAAGCTTGTGT
62 AAACACA-TTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCT
* *
63352 TTCCACCGTT-TATGATAGAATC-AAGTTGTCTC
126 TTCCACCATTAT-TGATAAAATCAAAG-TGTCTC
** * * * * * * *
63384 TTAAAAAAGACAAACA-GGAATACCCATACTAGTCCCCATTCTTTTCTGGATTAGGCCCCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * * * * *
63448 CATAGTCTTTTTATACGGATACATGATATTGAGGCTTTGGTTTCGCAAGATACGC-TTTCGTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* *
63512 ACCAATT-TGTG-TAAAATCTAAGTCCG-CACC
130 ACC-ATTAT-TGATAAAATCAAAGT--GTC-TC
* * * * * * *
63542 TCAAATGAGACAAACATGGATTCT-AGTA-TGGATCTTCACTCATTTC-ATGATTAGGCACTATA
1 TTAAATGAGACAAACATTGATTCTCA-TACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATA
* ** * * ** * ** *
63604 AACACATTCTCCTCCT-CAGGATGCATGATATTGATGGTTTTCTTTTGCATCAAAATCTTTTCTT
63 AACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
** * * *
63668 TGCC-TTATT-TTCCATAAAATCAAAGTTTGCAC
127 T-CCACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * * *
63700 TTTAAATGAGACATGCATTGATTCTCGTAAC-AGTCTCCATTCTTTTCAACATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCAT-ACTAATCTCCATTCTTTTCTAGATTAGGCACCATAA
* * * * *
63764 ACACATTCCTT-TCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTT
64 ACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
*
63827 TCCACCATTATTGA-AAGAATCAAAGTTGTCTT
127 TCCACCATTATTGATAA-AATCAAAG-TGTCTC
* * * * * * *
63859 TTAAATAAGACAAACA-TGAATACTCTTACTAATCCCCAATCTTTTCTGGATTTGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
** * * * * * *
63923 CGTAGTCTTCGTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGC-TTTCGTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
*
63987 ACCAATT-TGTG-TAAAATCTAAGTCCGTGC-C
130 ACC-ATTAT-TGATAAAATCAAAGT--GT-CTC
* * * * * *
64017 TCAAATGAGACAAACATGGA-T-TC-TAGT-ATCTTCATTCATTTC-ATGATTAGGCACTATAAA
1 TTAAATGAGACAAACATTGATTCTCATACTAATCTCCATTCTTTTCTA-GATTAGGCACCATAAA
* ** * * * * * * ** *
64077 CACATTCTCCTCCT-CAGGATGCATCATATTAATGGATTT-CTTTGGCTTCG-AAATCTTTTCTT
65 CACATTCTTCTTATAC-GGATACATGATATTGAT-GCTTTGGTTTCGC-AAGAAAAGCTTTTCTT
** * * *
64139 TGCC-TTATT-TTCCATAAAATCAAAGTTTGCAC
127 T-CCACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * *
64171 TTTAAATGAGACATGCATTGATTCTCGTAAC-AGTCTCCATTCTTTTCAAGATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCAT-ACTAATCTCCATTCTTTTCTAGATTAGGCACCATAA
* * * * * * *
64235 ACACATTCCTT-TGATTA-AGATACTTGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTT
64 ACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
* *
64298 TCCACCATTATTGATAGAATCAAAGTTGTCTT
127 TCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * * * **
64330 TTAAATAAGACAAACA-TGAATACTCTTACTAATCCCCATTCTTTTATGGATTTTGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * * *
64394 CATAGTCTTCTTATATGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTT-TTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* *
64458 ACCAATT-TGTG-TAAAATCTAAGTCCG-CGCC
130 ACC-ATTAT-TGATAAAATCAAAGT--GTC-TC
* * ** * * * * *
64488 TCAAATGAGACAAACATGGATTCTGGTA-TGGATCTTCACTCATTTC-ATGATTAGGCACTATAA
1 TTAAATGAGACAAACATTGATTCTCATACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATAA
* ** * * * ** * * *
64551 ACACATTCTCCTCCT-CAGGATGCAAGATATTGATGGTTTTCTTTTGCATCG-AAATCTTTTCTT
64 ACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAAGCTTTTCTT
** * * * *
64614 TGCC-TTATTTTTCATAAAATCAAAGTTTGCAC
127 T-CCACCATTATTGATAAAATCAAAGTGT-CTC
* ** * * * * *
64646 TTTAAAGGAGACATGCATTGATTCTCGTAAC-AGTCTCCATTCTTTTTTAAGATTAGGAACCAAA
1 -TTAAATGAGACAAACATTGATTCTCAT-ACTAATCTCCATTCTTTTCT-AGATTAGGCACCATA
* * * * *
64710 AACACATTCCTT-TCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCT
63 AACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCT
*
64773 TTCCACCATTATTGATAGAATCAAAGCTGTCTC
126 TTCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * * *
64806 TTAAATAAGACAAACA-GGAATACTCATACTAATCCCCATTCTTTTCTTGGTTAGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * *
64870 C-CTAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGC-TTTCGTCC
65 CAC-ATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC
* **
64933 CACCAATT-TGTG-TAAAATCTAAGTCCCTGCC
129 CACC-ATTAT-TGATAAAATCAAAGTGTCT--C
* * * * *
64964 TCAAATGAAACAAACATGGATTCT-AGTA-TAGATCTTCATTCTTTTC-ATGATTAGGCACTATA
1 TTAAATGAGACAAACATTGATTCTCA-TACTA-ATCTCCATTCTTTTCTA-GATTAGGCACCATA
* ** * * ** * * * *
65026 AACACATTCTCCTCCT-CAGGATGCATGATATTGATGGTTTTCTTTTGCATCG-AAATCTTTACT
63 AACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAAGCTTTTCT
** * * *
65089 TTGCC-TTATT-TTCCATAAAATCAAAGTTTGCAC
126 TT-CCACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * * *
65122 TTTAAATGAGACATGCACTGATTCTCGTAAC-AGTCTCCATTCTTTTCAAGATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCAT-ACTAATCTCCATTCTTTTCTAGATTAGGCACCATAA
* * * *
65186 ACACATTCCTT-TCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTGTCTT
64 ACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
* * * * *
65249 TCCGCCGTTATTGATAGAATCAACGTTGTCTT
127 TCCACCATTATTGATAAAATCAAAG-TGTCTC
* ** * *
65281 TTAAATTAGACAAACA-TGAACACTCATACTAATCCCCATTCTTTTCTAGATTAGGCACCGTAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * * * *
65345 CATAGTCTTCTTATACGAATACATGATATTGATGCTTTGGTTTCGCAAGATACGC-TTTCGTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* *
65409 ACCAATT-TGTG-TAAATTCTAAGTCCGTGC-C
130 ACC-ATTAT-TGATAAAATCAAAGT--GT-CTC
* * * * * *
65439 TCAAATGAGACAAACATGGATTCT-AGTA-TGGATCGT-CATTCATTTC-ACAATTAGGCACTAT
1 TTAAATGAGACAAACATTGATTCTCA-TACT-AATC-TCCATTCTTTTCTA-GATTAGGCACCAT
* * * * ** * * * *
65500 AAACACATTCTCCTCAT-CAGG-TGCATGATATTGATGGTTTTTTTTTGCATGGAAATCTTTTCT
62 AAACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCT
*** ** * *
65563 TTGCCTTAATT-TCCATAAAATCAAAGTTTGCAC
126 TT-CCACCATTATTGATAAAATCAAAGTGT-CTC
** * * * * * * *
65596 TTTAAATGAGACATGCATTGATTCTCGTA-AAAGTATCCATTCTTTTCAAGATCAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCATACTAA-TCTCCATTCTTTTCTAGATTAGGCACCATAA
* * * * *
65660 ACACATTCCTT-TCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTCTCTT
64 ACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
* * *
65723 TCCACCGTGATTGATAGAATCAAAGTTGTCTC
127 TCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * ** *
65755 TTAAATAAGACAGACA-GGAACACTCATACTAATC-CCTATTCTTTTCTGGATTAGGCACCATAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCC-ATTCTTTTCTAGATTAGGCACCATAA
* * * * * * * * *
65818 ACATAGTCTTTTTATACGGATACATGATATTGAGGCTTTGGTCTCGCAAGATACGC-TTTCGTCC
64 ACACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC
* * *
65882 CACCACTT-TGTG-TAAATTCTAAGTTTGGGC-C
129 CACCA-TTAT-TGATAAAATCAAAG--T-GTCTC
* * * * * *
65913 TCAAATGAGACAAACATCGATTCT-AGTA-TGGATCTTCATTCATTTC-ATGATTAGGCACTATA
1 TTAAATGAGACAAACATTGATTCTCA-TACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATA
* * * * * * ** * * *
65975 AACACGTTCTCCTCA-GCAGGATGCATGATATTGATGGTTTTCTTTTGCATCG-AAATCTTTTCT
63 AACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAAGCTTTTC-
** * * * *
66038 TTTCC-TTATT-TTCCATAAAATAAAAGTTTGCAC
125 TTTCCACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * *
66071 TTTAAATGAGACATGCATTGATTCTCGTAAC-AGTCTCCATTCTTTTCAAGATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCAT-ACTAATCTCCATTCTTTTCTAGATTAGGCACCATAA
* ** * *
66135 ACACATTCCTT-TCATTA-GGATACATGGCATTGATGCTTTGGTGTCGCAA-AAGAAGCTTGTCT
64 ACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAA-AAGCTTTTCT
* *
66197 TTCCACCATTATTGATAGAATCAAAGTTGTCTT
126 TTCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * * * *
66230 TTAAATAAGACAAACA-TGAATACTCTTACTAATCCCCAATCTTTTCTGGATTTGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
** * * * * * * *
66294 CGTAGTCTTCGTATACGGATACATGATATTAATGCTTTGGTTTCGCAAGATACGC-TTTCGTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
*
66358 ACCAATT-TGTG-TAAAATCTAAGTCCGTGC-C
130 ACC-ATTAT-TGATAAAATCAAAGT--GT-CTC
* * * * * * *
66388 TCAAATGAGACAAACATGGA-T-TC-TAGT-ATCTTCATTCATTTCAAGATTAGGCACTATAAAC
1 TTAAATGAGACAAACATTGATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAAC
* ** * * * * * * ** *
66449 ACATTCTCCTCCT-CAGGATGCATCATATTAATGGATTT-CTTTGGCTTCG-AAATCTTTTCTTT
66 ACATTCTTCTTATAC-GGATACATGATATTGAT-GCTTTGGTTTCGC-AAGAAAAGCTTTTCTTT
** * * *
66511 GCC-TTATT-TTCCATAAAATCAAAGTTTGCAC
128 -CCACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * *
66542 TTTAAATGAGACATGCATTGATTCTCGTAAC-AGTCTCCATTCTTTTCAAGATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCAT-ACTAATCTCCATTCTTTTCTAGATTAGGCACCATAA
* * * * * *
66606 ACACATTCCTT-TCATTA-GGATACATGACATTGATGCTTTGGTGTCGCACGAGAAGCTTGTCTT
64 ACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTT
* * *
66669 T------GTATTGATAGAATCAAAGTTGTCTT
127 TCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * * * **
66695 TTAAATAAGACAAACA-TGAATACTCTTACTAATCCCCATTCTTTTATGGATTTTGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * * *
66759 CATAGTCTTCTTATATGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTT-TTCCC
65 CACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC
* *
66823 ACCAATT-TGTG-TAAAATCTAAGCCTG-CGCC
130 ACC-ATTAT-TGATAAAATCAAAG--TGTC-TC
* * ** * * * * * *
66853 TCAAATGAGACAAACATGGATTCTGGTA-TGGATCTTCACTCATTT-GATGATTAGGCACTATAA
1 TTAAATGAGACAAACATTGATTCTCATACT-AATCTCCATTCTTTTCTA-GATTAGGCACCATAA
* ** * * * ** * * *
66916 ACACATTCTCCTCCT-CAGGATGCAAGATATTGATGGTTTTCTTTTGCATCG-AAATCTTTTCTT
64 ACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAAGCTTTTCTT
** * * * *
66979 TGCC-TTATTTTTCATAAAATCAAAGTTTGCAC
127 T-CCACCATTATTGATAAAATCAAAGTGT-CTC
** * * * *
67011 TTTAAATGAGACATGCATTGATTCTCGTAAC-AGTCTCCATTCTTTTTTAAGATTAGGAACCGA-
1 -TTAAATGAGACAAACATTGATTCTCAT-ACTAATCTCCATTCTTTTCT-AGATTAGGCACC-AT
* * * * *
67074 AAACACATTCCTT-TCATTA-GGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTC
62 AAACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTC
* *
67137 TTTCCACCATTATTGATAGAATCAAAGTTGTCTT
125 TTTCCACCATTATTGATAAAATCAAAG-TGTCTC
* * * * * * * *
67171 TTACATAAGACAAACA-TGAATACTCTTCCTAATCCCCATTCTTTTCTGGATTTGGCACCATAAA
1 TTAAATGAGACAAACATTG-ATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAA
* * * * *
67235 C-CTAGTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGATACGC-TTTCGTCC
65 CAC-ATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC
* **
67298 CACCAATT-TGTG-TAAAATCTAAGTCCCTGCC
129 CACC-ATTAT-TGATAAAATCAAAGTGTCT--C
* * ** * *
67329 TCAAATGAGACAAACATGGATTCT-AGTA-TAGATCTTTACTCTTTTC-ACGATTAGGCACTATA
1 TTAAATGAGACAAACATTGATTCTCA-TACTA-ATCTCCATTCTTTTCTA-GATTAGGCACCATA
* ** * * ** * * *
67391 AACACATTCTCCTCCT-CAGGATGCATGATATTGATGGTTTTCTTTTGCATCG-AAATCTTTTCT
63 AACACATTCTTCTTATAC-GGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAAGCTTTTCT
** * * *
67454 TTGCC-TTATT-TTCCATAAAATCAAAGTTTGCAC
126 TT-CCACCATTATT-GATAAAATCAAAGTGT-CTC
** * * * * * *
67487 TTTAAATGAGACATGCACTGATTCTCGTAGC-AGTCTCCATTCTTTTCAAGATTAGGAACCAAAA
1 -TTAAATGAGACAAACATTGATTCTCATA-CTAATCTCCATTCTTTTCTAGATTAGGCACCATAA
* *
67551 ACACATTCCTT-TCATTA-GGATACATGACATTGATGCTTTGGTGTT-GCAAGAAAAGC
64 ACACATT-CTTCTTA-TACGGATACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGC
67607 CCAAAAACAC
Statistics
Matches: 8853, Mismatches: 2585, Indels: 1701
0.67 0.20 0.13
Matches are distributed among these distances:
151 11 0.00
152 87 0.01
153 23 0.00
154 136 0.02
155 213 0.02
156 511 0.06
157 828 0.09
158 3592 0.41
159 2968 0.34
160 414 0.05
161 61 0.01
162 7 0.00
163 2 0.00
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.35
Consensus pattern (157 bp):
TTAAATGAGACAAACATTGATTCTCATACTAATCTCCATTCTTTTCTAGATTAGGCACCATAAAC
ACATTCTTCTTATACGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCA
CCATTATTGATAAAATCAAAGTGTCTC
Found at i:67663 original size:62 final size:62
Alignment explanation
Indices: 67545--67668 Score: 212
Period size: 62 Copynumber: 2.0 Consensus size: 62
67535 AGATTAGGAA
* **
67545 CCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAAGC
1 CCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGGGTCACAAGAAAAGC
*
67607 CCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGGGTCACAAGAGAAGC
1 CCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGGGTCACAAGAAAAGC
67669 TTTTCTATCT
Statistics
Matches: 58, Mismatches: 4, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
62 58 1.00
ACGTcount: A:0.34, C:0.20, G:0.19, T:0.27
Consensus pattern (62 bp):
CCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGGGTCACAAGAAAAGC
Found at i:68504 original size:476 final size:477
Alignment explanation
Indices: 67607--69405 Score: 2352
Period size: 476 Copynumber: 3.8 Consensus size: 477
67597 CAAGAAAAGC
* *
67607 CCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGGGTCACAAGAGAAGCTTT
1 CCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTG
* * ** * *
67672 TCTATCTATTGTTATGGATAGAATCAAAGTTTGT-TACTTAAATAAGACAAACATGAATACTCAT
66 TCTTTCCACCGTTATTGATAGAATAAAAGTTTGTCT-CTTAAATAAGACAAACATGAATACTCAT
* * *
67736 ACTAATCCCCATTCTTTTC-AGGATTAGGCACCATAAACATAGTCTTCTCATAAAGATACAA-GA
130 ACTAATCCACATTCTTTTCTAGGATTAGGCACCATAAACATACTCTTCTCATAAGGATA-AAGGA
* * * *
67799 TATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCTCACCAATTTTTGTAAATTCTATGTTCGT
194 TATTGATGATTTGGTTTCGCAAGAAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCAT
* *
67864 GCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCATTGTA
259 GCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATA
* *
67929 AACACATTCTCCCCATTAGGATAAATGATATTTATGGTTTTCTTTTGCATAGAAATCTTTTCTTT
324 AACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATAGAAATCTTTTCTTT
* * *
67994 GCCTTATTTT-TCTTAAAATCAAAGTTTTTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAC
389 GCCTTATTTTCT-TTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
*
68058 TCTCCAATCTTTTCAAGATTGGGAA
453 TCTCCATTCTTTTCAAGATTGGGAA
* ** *
68083 CCAAAAACACATTCCTTTCATTATGATACATGACATTGATGCTTTGGTGTTGCAAGAGCAGCTTG
1 CCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTG
*
68148 TCTTTCCACCGTTATTGATAGAATAAAAGTTTGTCTCTTAAATAAGACAAATATGAATACTCATA
66 TCTTTCCACCGTTATTGATAGAATAAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATA
* * * * *
68213 CTAATCCACATTCTTTTCTA-GATTAGGCATCGTCAAA-ATACTCTTTTCATAAGGATACAGGAA
131 CTAATCCACATTCTTTTCTAGGATTAGGCACCAT-AAACATACTCTTCTCATAAGGATAAAGGAT
* **
68276 ATTGATGATTTGGCTTCGCAAG-AACTACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTTGT
195 ATTGATGATTTGGTTTCGCAAGAAAC-ACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCAT
* * * * * *
68340 GCCTCGAATGATACAAACATAGATTCTTGTAAGGATCTTCATCCAGTTCGTGATTAGGCACTATA
259 GCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATA
* * *
68405 AACACATTCTCCTCATTAGGGTACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
324 AACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATAGAAATCTTTTCTTT
*
68470 GCCTTATTTTCTTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTGGTAAAAGT
389 GCCTTATTTTCTTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGT
* *
68535 CTCCATTCTTTTTAAGATTAGGAA
454 CTCCATTCTTTTCAAGATTGGGAA
* *
68559 CCAAAAACCCATTACTTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTG
1 CCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTG
* * * *
68624 TCTTTCCACCATTATTGATACAATCAAAA-TTTGACTCTTAAATAAGACAAACATGAATACTCAC
66 TCTTTCCACCGTTATTGATAGAAT-AAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAT
* * *
68688 ACTAATCTACATTCTTTTCT-GGATTAGGCACCATAAACAT-CGTTTTCTCATAAGGATAAATGA
130 ACTAATCCACATTCTTTTCTAGGATTAGGCACCATAAACATAC-TCTTCTCATAAGGATAAAGGA
* * * *
68751 TATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTGAA-GCATAAGTTCA
194 TATTGATGATTTGGTTTCGCAAGAAACACTTTTTTCCCACCAATTTTTGTAAATTC-TAAGTTCA
* * * * * * **
68815 TTCCTCAAATTAGACAAACATGAATTCTAGCAAGGATCTTCATTCATTTTGTGGTTAGATACTAT
258 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTAT
* *
68880 AAACGCATTCTCTTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATTA-AAATCTTTTCT
323 AAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCA-TAGAAATCTTTTCT
* * * * * *
68944 TTGCCTCATTTTC-TT-AGATCAAAGTTTGTGCTTTAAATGAGACATTCTTTGATTCTCATAAAA
387 TTGCCTTATTTTCTTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
** * *
69007 GTCTCCATTCTTGCCAAGACTGGGAT
452 GTCTCCATTCTTTTCAAGATTGGGAA
* * * * * * * * * * *
69033 CCCAAAGCACATTCCCTTCACTAGAATACATGACATTGATGCGTTGCTCTCATAAGAAAAGCTTT
1 CCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTG
* * * * * *
69098 TCTTTCCATCTTTAATGATAAAATCAAAGTTTGTCACTTAAATAAGACAAACATGAATACTCATA
66 TCTTTCCACCGTTATTGATAGAATAAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATA
* * * * *
69163 CTAATCCACATT-TTTT-TGAGGATTAAGAATCGTAAACATAGTCTTCTCATAAGGATAAAGGAT
131 CTAATCCACATTCTTTTCT-AGGATTAGGCACCATAAACATACTCTTCTCATAAGGATAAAGGAT
* ** * * * *
69226 ATTGATGATTTGGTTTTGCAAGAAACGTTTTTTTCCCATCAATTTTTGTAAATTCCATGCTCATG
195 ATTGATGATTTGGTTTCGCAAGAAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCATG
69291 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
260 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* * ** * *
69356 ACACAATCTCCTCATCAGGATGCATGATATTTATGGTTTTCTTTAGCATA
325 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATA
69406 AGTTTGTACT
Statistics
Matches: 1145, Mismatches: 160, Indels: 39
0.85 0.12 0.03
Matches are distributed among these distances:
472 1 0.00
473 9 0.01
474 363 0.32
475 12 0.01
476 746 0.65
477 14 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (477 bp):
CCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTG
TCTTTCCACCGTTATTGATAGAATAAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATA
CTAATCCACATTCTTTTCTAGGATTAGGCACCATAAACATACTCTTCTCATAAGGATAAAGGATA
TTGATGATTTGGTTTCGCAAGAAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCATGC
CTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAA
CACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATAGAAATCTTTTCTTTGC
CTTATTTTCTTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCT
CCATTCTTTTCAAGATTGGGAA
Found at i:70251 original size:398 final size:398
Alignment explanation
Indices: 69512--70306 Score: 1103
Period size: 398 Copynumber: 2.0 Consensus size: 398
69502 ATGGCAATGT
* ** **
69512 TGCTTTGGTGCTACAAGAGAAGCTTGTCTTCCCACCGTTATTGATGGAATCAAAGTTTGTCTCTT
1 TGCTTTGGTGCTACAAGAGAAGCTTGTCTTCCCACCGTTAATGATAAAATCAAAGTTCATCTCTT
* * * *
69577 AAATAAGGCAAAAATGTATACTCATACTAATCCACATTCTTTTCTGGATTAGGCAGCATAAACAT
66 AAATAAGACAAAAATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACAC
** * * ****
69642 AGTCTTCTCATAAGCATAAATGATATTGATTCTTTGGTTTCGCAAGAAACGCTTTCTTCTGGGCA
131 AGTCTTCTCATAAGCATAAATGATATTGATGATTTGGTTTAGCAAGAAACGATTTCTTCCCACCA
* * * *
69707 ATTTTTGTAAAGTATAAGCTCGTGTCTCAAATGAGACAAACGTGGATTCTAGTAAGGATCTTCAT
196 ATTTTTGTAAAGTATAAGCTCGTGCCTCAAATGAGACAAACATGAATTCTAGTAAAGATCTTCAT
* * *
69772 TCATTTCGTGATTAGGCACTATAAATACATTCTCCTCATTAGGATAAATGATATTTATGGTTTTC
261 TCATTTCGGGATTAGGCACTATAAATACATTCTCCTCATCAGGATAAATGATATTGATGGTTTTC
* * *
69837 TTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGA
326 TTTTGCATGAAAATCTTTTCTTCGCCTTATTTCCCTTAAAATCAAAGTTTATACTTTAAATGAGA
69902 CATGCATA
391 CATGCATA
* * * * *
69910 TGCTTTGGTGTTGCAAGAGAAGCTTTTCTTTCCACTGTTAATGATAAAATCAAAGTTCATCTCTT
1 TGCTTTGGTGCTACAAGAGAAGCTTGTCTTCCCACCGTTAATGATAAAATCAAAGTTCATCTCTT
* * *
69975 AAATAAGACAAACATGAATATTCCTACTAATACC-CATTCTTTT-TAGGATTAGGCACCATAAAC
66 AAATAAGACAAAAATGAATACTCATACTAAT-CCACATTCTTTTCT-GGATTAGGCACCATAAAC
* * *
70038 ACAGTCTTCTCATAAGGAT-ACTGGATATTGATGATTTGGTTTAGCTAGAAACAGATTT-TTCCC
129 ACAGTCTTCTCATAAGCATAAAT-GATATTGATGATTTGGTTTAGCAAGAAAC-GATTTCTTCCC
* * *
70101 ACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGAATTCTAGTAAAGATCT
192 ACCAATTTTTGTAAAGTATAAGCTCGTGCCTCAAATGAGACAAACATGAATTCTAGTAAAGATCT
* *
70166 TCATTTATTTCGGGATTAGGCACTATAAATACATTCTCCTCATCAGGATACATGATATTGATGGT
257 TCATTCATTTCGGGATTAGGCACTATAAATACATTCTCCTCATCAGGATAAATGATATTGATGGT
** * *
70231 TTTCTTTTGTGTGGAAATCTTTTCTTCGCCTTATTTCCCTTAAAATCAAATTTTATACTTTAAAT
322 TTTCTTTTGCATGAAAATCTTTTCTTCGCCTTATTTCCCTTAAAATCAAAGTTTATACTTTAAAT
70296 GAGACATGCAT
387 GAGACATGCAT
70307 TGATTCTTGT
Statistics
Matches: 346, Mismatches: 47, Indels: 8
0.86 0.12 0.02
Matches are distributed among these distances:
397 3 0.01
398 337 0.97
399 6 0.02
ACGTcount: A:0.31, C:0.17, G:0.15, T:0.37
Consensus pattern (398 bp):
TGCTTTGGTGCTACAAGAGAAGCTTGTCTTCCCACCGTTAATGATAAAATCAAAGTTCATCTCTT
AAATAAGACAAAAATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACAC
AGTCTTCTCATAAGCATAAATGATATTGATGATTTGGTTTAGCAAGAAACGATTTCTTCCCACCA
ATTTTTGTAAAGTATAAGCTCGTGCCTCAAATGAGACAAACATGAATTCTAGTAAAGATCTTCAT
TCATTTCGGGATTAGGCACTATAAATACATTCTCCTCATCAGGATAAATGATATTGATGGTTTTC
TTTTGCATGAAAATCTTTTCTTCGCCTTATTTCCCTTAAAATCAAAGTTTATACTTTAAATGAGA
CATGCATA
Found at i:72561 original size:476 final size:475
Alignment explanation
Indices: 69909--74986 Score: 6375
Period size: 476 Copynumber: 10.7 Consensus size: 475
69899 AGACATGCAT
* * * * **
69909 ATGCTTTGGTGTTGCAAGAGAAGCTTTTCTTTCCACTGTTAATGATAAAATCAAAGTTCATCTCT
1 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCT
* *
69974 TAAATAAGACAAACATGAATATTCCTACTAATACC-CATTCTTTT-TAGGATTAGGCACCATAAA
66 TAAATAAGACAAACATGAATACTCATACTAAT-CCACATTCTTTTCT-GGATTAGGCACCATAAA
* * * * * *
70037 CACAGTCTTCTCATAAGGAT-ACTGGATATTGATGATTTGGTTTAGCTAGAAACAG-ATTTTTCC
129 CATAGTCTTCTCATAAGGATAAAT-GATATTGATGATTTGGTTTCGCAAGAAA-TGCTTTTTTCC
* * * *
70100 CACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACAT-GAATTCTAGTAAAGAT
192 CACCAATTTTTGTAAATTATAAGTTCATTCCTCAAATGAGACAAACATAG-ATTCTAGTAAGGAT
* * * *
70164 CTTCATTTATTTCGGGATTAGGCACTATAAATACATTCTCCTCATCAGGATACATGATATTGATG
256 CTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATG
** * * * * *
70229 GTTTTCTTTTGTGTGGAAATCTTTTCTTCGCCTTATTTCCCTTAAAATCAAATTTTATACTTTAA
321 GTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAA
* * * * *
70294 ATGAGACATGCATTGATTCTTGTAAAAGTCTTCATTCCTTTTAAGACTAGGAACCAAAAACACAG
386 ATGAGACATGCATTGATTCTCGTAAAAGTCTCCATT-CTTTTAAGATTGGGAACCAAAAACACAT
** *
70359 TCTTTTCATTAGGATACAAGACATTG
450 TCCCTTCATTAGGATACATGACATTG
* * * *
70385 ATGCTTTGGTGTCGCAAGAGAAGCTTGTC-TTCCTCCCGTTATTGATAGAATCAAAGATTGTCTG
1 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC-ACCGTTATTGATAGAATCAAAGTTTGTCTC
* * *
70449 TTAAATAAGATAAACATGAATACTCATACTAATCCAC-TATCTTTTCTGGATTAGACACCGTAAA
65 TTAAATAAGACAAACATGAATACTCATACTAATCCACAT-TCTTTTCTGGATTAGGCACCATAAA
* * * * * * *
70513 AATAGCCTTCTCATAAGGATACAGGATATTGATGATTTTGTTTTGCAAGAAAGGCTTTTTTCCCA
129 CATAGTCTTCTCATAAGGATAAATGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCA
* * * *
70578 CCAATTTTTGTAAATTCTAAGTTC-GTGCT--AATGAGACAAACAT-GAATTCTGGTAAGGATCT
194 CCAATTTTTGTAAATTATAAGTTCATTCCTCAAATGAGACAAACATAG-ATTCTAGTAAGGATCT
* *
70639 TCATTCATTTCGGGATTAGGCACTATAAATACATTCTCCTCATTAGGATACATGATATTGATGGT
258 TCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGT
* *
70704 TTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTATTTTAATT
323 TTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAAT
* * * * *
70769 GAGACATGCATTGATTCTCGTAAAAGTATCCATTCTTTCCAAGATTAGGATCCAAAAACACTTTC
388 GAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTT-TAAGATTGGGAACCAAAAACACATTC
*
70834 CCTTCATTAGGATAAATGACATTG
452 CCTTCATTAGGATACATGACATTG
* * *** *
70858 ATGCTTTGGTGTTGCAAGAGAAGCTTTTTTTTCCACCGTTAACAATACAATCAAAGTTTGTCTCT
1 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCT
* * * *
70923 TAAATAAGACAAACATGAATACTCGTACTAATCCCCATTCTTTTCAGGATTAAGCACCATAAACA
66 TAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACA
* * * **
70988 TAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGTTTTTTTCCCATT
131 TAGTCTTCTCATAAGGATAAATGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACC
* * ** *
71053 AATTTCTGTAAATTCTTTGTTCATGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCA
196 AATTTTTGTAAATTATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCA
* * * ** * * *
71118 TTTATTTCGTGATTAGGGACTATAAACACAATCTCCTTGTCACGATGCATGATATTGATGGTTTT
261 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTTTT
* * *
71183 CTTTTGCAAGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATGAG
326 CTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAG
* * * * *
71248 -CAAGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGAGAACCAAAAACAAATTCCTT
391 ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT-AAGATTGGGAACCAAAAACACATTCCCT
71312 TCATTAGGATACATGACATTG
455 TCATTAGGATACATGACATTG
* * * * *
71333 ATACATTGGTCTCGCAAGAGAAGCCTTTCTTTCCACCGTTATTAATAGAATCAAAGTTTGTCTCT
1 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCT
* * *
71398 TAAATAAGACAAACATGAATACTCATACAAATCTACATTCTTTTTTGGATTAGGCACCATAAACA
66 TAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACA
** * * * *
71463 TAGTCTTCTCATAAGGATACCTGATAATGATGCTTTGGATTCGCAAGAAATGCTTTTTTCCCCCC
131 TAGTCTTCTCATAAGGATAAATGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACC
71528 AATTTTTGT-AATATATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTC
196 AATTTTTGTAAAT-TATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTC
* * * * * * * *
71592 TTTCATTTCGGGAGTAGGCATTATAAACACTTTCTCCTCATTAGGATAAATGATATTAATGGGTT
260 ATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTTT
* * * * *
71657 TCTTTTGCCTGGAAATCTTTTGTTTGCCTCATTTTCCTTAGAATCAAAGTTTGTATTTTAATTGA
325 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGA
* * * ** * * * * *
71722 GACATGCATCGATTCTCATAAAAGTCTCCACTCTTTCCGAGATTAGGATCGAAGAACACTTTCCC
390 GACATGCATTGATTCTCGTAAAAGTCTCCATTCTTT-TAAGATTGGGAACCAAAAACACATTCCC
* *
71787 TTCATTAGGATAAATGACGTTG
454 TTCATTAGGATACATGACATTG
* * *
71809 ATGCTTTGGTG-CTGCAAGAGAAGCTTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTGTCT
1 ATGCTTTGGTGTC-GCAAGAGAAGC-TTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCT
* * * **
71873 CTTAAATAAGACAAACATGAACACTCATACTAATCCCCATTTTTTTCAAGATTAGGCACCATAAA
64 CTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAA
* * * *
71938 TATAGTCTTCTCTTAAGGATAAAGGATATTGATGATTTTGTTTCGCAAGAAATGCTTTTTTCCCA
129 CATAGTCTTCTCATAAGGATAAATGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCA
* * * * * * *
72003 TCAATTTCTGTAAATTTTATGTTCGTGCCACAAATGAGACAAACATAGATTCTAGTAAGGATCTT
194 CCAATTTTTGTAAATTATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTT
* * * * * ** * *
72068 CATTTATTTCATGATTAGGGACAATAAACACAATCTCCTTGTCACGATACATGATATTGATGGTT
259 CATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTT
* *
72133 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATG
324 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATG
* *
72198 AGACATGCATTGATTCTTGCAAAAGTCTCCATTCGTTTTAAGATTGGGAACCAAAAACACATTCC
389 AGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTTAAGATTGGGAACCAAAAACACATTCC
* *
72263 CTTCATTAGGATACCTGACGTTG
453 CTTCATTAGGATACATGACATTG
* * *
72286 ATGCTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTATTGATAGAATCAAAGTTCGTCTCT
1 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCT
* * * **
72351 TAATTAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCTGTATAAGGCACTGTAAACA
66 TAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACA
* * * * ** *
72416 TAGTGTTCTCATAAGGATAAATGATATTGACGCTTTGGTTTTGCAAGAAACACTTTATTGCCC-C
131 TAGTCTTCTCATAAGGATAAATGATATTGATGATTTGGTTTCGCAAGAAATGCTTT-TTTCCCAC
* * *
72480 CAATTTTTGTAAAGTATAAGTTCATTCCTCAAATTAGACAAACATGGATTCTAGTAAGGATCTTC
195 CAATTTTTGTAAATTATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTC
* * * *
72545 ATTCATTTCGTGATTAGGCACTATAAACAGACTCTCCTCATTAGGATAAATGATACTGATGGTTT
260 ATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTTT
* * *
72610 TCTTTTGCATGTAAATCTTTTCTTTGCATTATTTTCCTTAAAATCAAAGTTTGCATTTTAAATGA
325 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGA
* * * * *
72675 GACATGCATTAATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGAGAACCAAAAGCAAATTCCT
390 GACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT-AAGATTGGGAACCAAAAACACATTCCC
72740 TTCATTAGGATACATGACATTG
454 TTCATTAGGATACATGACATTG
* * * * *
72762 ATACTTTGGTCTCGCAAGAGAAGCCTTTCTTTCCA-CGATTATTAATAGAATCAAAGTTTATCTC
1 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCG-TTATTGATAGAATCAAAGTTTGTCTC
* * *
72826 TTAAATAAGACAAACATGAATACTCATACAAATCTACATTCTTTTTTGGATTAGGCACCATAAAC
65 TTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAAC
** * * * *
72891 ATAGTCTTCTCATAAGGATACCTGATAATGATGCTTTGGATTCGCAAGAAATGCTTTTTTCCCCC
130 ATAGTCTTCTCATAAGGATAAATGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCAC
72956 CAATTTTTGT-AATATATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTT
195 CAATTTTTGTAAAT-TATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTT
* * * * * * *
73020 CTTTCATTTCGGGATTAGGCATTATAAACACTTTCTCCTCATTAGGATAAATGATATTAATGGGT
259 CATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTT
* * * * *
73085 TTCTTTTGCCTGGAAATCTTTTGTTTGCCTCATTTTCCTTAGAATCAAAGTTTGTATTTTTAATT
324 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA-TTTTAAAT
* * ** * * * *
73150 GAGACATGCATCGATTCTCGTAAAAGTCTCCACTCTTTCCGAGATTAGGATCGAAAAACACTTTC
388 GAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTT-TAAGATTGGGAACCAAAAACACATTC
* *
73215 CCTTCATTAGGATAAATGACGTTG
452 CCTTCATTAGGATACATGACATTG
* * *
73239 ATGCTTTGGTG-CTGCAAGAGAAGCTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTC
1 ATGCTTTGGTGTC-GCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTC
* * ** *
73303 TTAAATAAGACAAACATGAACACTCATACTAATCCCCATTCTTTTCAAGATTAGGCACCATAAAT
65 TTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAAC
* * * *
73368 ATAGTCTTCTCTTAAGGATAAAGGATATTGATGATTTTGTTTCGCAAGAAATGCTTTTTTCCCAT
130 ATAGTCTTCTCATAAGGATAAATGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCAC
* * * * * *
73433 CAATTTCTGTAAATTTTATGTTCGTGCCACAAATGAGACAAACATAGATTCTAGTAAGGATCTTC
195 CAATTTTTGTAAATTATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTC
* * * * ** * *
73498 ATTTATTTCGTGATTAGGGACAATAAACACAATCTCCTTGTCACGATACATGATATTGATGGTTT
260 ATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTTT
*
73563 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTATTTTAAATGA
325 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGA
* *
73628 GACATGCATTGATTCTTGCAAAAGTCTCCATTCGTTTTAAGATTGGGAACCAAAAACACATTCCC
390 GACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTTAAGATTGGGAACCAAAAACACATTCCC
* *
73693 TTCATTAGGATACCTGACGTTG
454 TTCATTAGGATACATGACATTG
* * * * *
73715 ATGCTTTAGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTATTGATAGAATCGAAGTTCGTCTCT
1 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCT
* * * * **
73780 TAATTAAGACAAACATGAATACTCATACTAATCCACATTCTTTTTTGTATAAGGCACTGTAAACA
66 TAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACA
* * * * ** *
73845 TAGTGTTCTCATAAGGATAAATGATATTGACGCTTTGGTTTTGCAAGAAACACTTTCTTGCCC-C
131 TAGTCTTCTCATAAGGATAAATGATATTGATGATTTGGTTTCGCAAGAAATGCTTT-TTTCCCAC
* * *
73909 CAATTTTTGTAAAGTATAAGTTCATTCCTCAAATTAGACAAACATGGATTCTAGTAAGGATCTTC
195 CAATTTTTGTAAATTATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTC
* * *
73974 ATTCATTTCGTGATTAGGCACTATAAACAGACTCTCCTCATTAGGATAAATGATATTGATGGTTT
260 ATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTTT
* * *
74039 TCTTTTGCTTGTAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATAA
325 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGA
* * * * *
74104 GACATGCATTAATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGAGAACCAAAAGCAAATTCCT
390 GACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT-AAGATTGGGAACCAAAAACACATTCCC
74169 TTCATTAGGATACATGACATTG
454 TTCATTAGGATACATGACATTG
* * * * *
74191 ATACTTTGGTCTCGCAAGAGAAGCCTTTCTTTCCA-CGATTATTAATAGAATCAAAGTTTATCTC
1 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCG-TTATTGATAGAATCAAAGTTTGTCTC
* * *
74255 TTAAATAAGACAAACATGAATACTCATACAAATCTACATTCTTTTTTGGATTAGGCACCATAAAC
65 TTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAAC
** * * * *
74320 ATAGTCTTCTCATAAGGATACCTGATAATGATGCTTTGGATTCGCAAGAAATGCTTTTTTCCCCC
130 ATAGTCTTCTCATAAGGATAAATGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCAC
74385 CAATTTTTGT-AATATATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTT
195 CAATTTTTGTAAAT-TATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTT
* * * * * ** *
74449 CTTTCATTTCGGGATTAGGCATTATAAACACTTTCTCCTCATTAGGATAAATGATATAAATGGGT
259 CATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTT
* * * *
74514 TTCTTTTGCCTGGAAATCTTTTCTTTGCCTCATTTTCCTTAGAATCAAAGTTTGTATTTTAATTG
324 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATG
* * * * * *
74579 AGACATGCATTGATTC-CAATAAAAGTCTCCACTATTTCCAAGATT-AGAATCCAAAAACACTTT
389 AGACATGCATTGATTCTC-GTAAAAGTCTCCATTCTTT-TAAGATTGGGAA-CCAAAAACACATT
*
74642 CCCTTCATTAGGATAAATGACATTG
451 CCCTTCATTAGGATACATGACATTG
* * * * *
74667 ATGCTTTGGTG-CTGTAAGAGAAGCTTTTTTTTCCACCGTTAATGATAAAATCAAAG-TT-TATC
1 ATGCTTTGGTGTC-GCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTC
* * * * *
74729 TT---TAAGACAAACATGAACACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATGAAT
65 TTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAAC
* * * * *
74791 ATAGTCTTCCCATAAGGATAAAGGATATTGATGATTTTGTTTCGTAAGAAATGCTTTTTTCCCAT
130 ATAGTCTTCTCATAAGGATAAATGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCAC
* * * * * *
74856 CAATTTCTGTAAATTCTATGTTCGTGCCACAAATGAGACAAACATAGATTCTAGTAAGGATCTTC
195 CAATTTTTGTAAATTATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTC
* * * * *
74921 ATTTATTTCGTGATTAGGGACAATAAACACAATCTCC-C-TGTCACGATACATGATATTGATGGT
260 ATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAT-T-AGGATACATGATATTGATGGT
74984 TTT
323 TTT
74987 AAGATTGGGA
Statistics
Matches: 3947, Mismatches: 608, Indels: 99
0.85 0.13 0.02
Matches are distributed among these distances:
469 1 0.00
470 2 0.00
471 209 0.05
472 7 0.00
473 402 0.10
474 15 0.00
475 448 0.11
476 2038 0.52
477 813 0.21
478 12 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (475 bp):
ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCT
TAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACA
TAGTCTTCTCATAAGGATAAATGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACC
AATTTTTGTAAATTATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCA
TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTTTT
CTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAG
ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTAAGATTGGGAACCAAAAACACATTCCCTT
CATTAGGATACATGACATTG
Found at i:72746 original size:953 final size:947
Alignment explanation
Indices: 69909--74986 Score: 6608
Period size: 953 Copynumber: 5.3 Consensus size: 947
69899 AGACATGCAT
* * **
69909 ATGCTTTGGTGTTGCAAGAGAAGCTTTTCTTTCCACTGTTAATGATAAAATCAAAGTTCATCTCT
1 ATGCTTTGGTGCTGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCT
* * *
69974 TAAATAAGACAAACATGAATATTCCTACTAATACCCATTCTTTTTAGGATTAGGCACCATAAACA
66 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACA
* ** * * * *
70039 CAGTCTTCTCATAAGGATACTGGATATTGATGATTTGGTTTAGCTAGAAACAG-ATTTTTCCCAC
131 TAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAA-TGCTTTTTTCCCAC
* * * *
70103 CAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACAT-GAATTCTAGTAAAGATCTT
195 CAATTTCTGTAAATTATAAGTTCATGCCTCAAATGAGACAAACATAG-ATTCTAGTAAGGATCTT
* * * *
70167 CATTTATTTCGGGATTAGGCACTATAAATACATTCTCCTCATCAGGATACATGATATTGATGGTT
259 CATTTATTTCGTGATTAGGCACTATAAACACAATCTCCTCATCACGATACATGATATTGATGGTT
** * * * *
70232 TTCTTTTGTGTGGAAATCTTTTCTTCGCCTTATTTCCCTTAAAATCAAATTTTATACTTTAAATG
324 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
* * * * * *
70297 AGACATGCATTGATTCTTGTAAAAGTCTTCATTCCTTTTAAGACTAGGAACCAAAAACACAGTCT
389 AGACATGCATTGATTCTCGTAAAAGTCTCCATT-CTTTTAAGATTGGGAACCAAAAACACATTCC
* *
70362 TTTCATTAGGATACAAGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTC-TTCCTCCCGTTA
453 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTT-TCTTTCC-ACCGTTA
* * *
70426 TTGATAGAATCAAAGATTGTCTGTTAAATAAGATAAACATGAATACTCATACTAATCCAC-TATC
516 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACAT-TC
* * * * * * *
70490 TTTTCTGGATTAGACACCGTAAAAATAGCCTTCTCATAAGGATACAGGATATTGATGATTTTGTT
580 TTTTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTT
* * * * * *
70555 TTGCAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC-GTGCT--AATGAGACAA
645 TCGCAAGAAATGC-TTTTTCCCCCCAATTTTTGTAAA-TATAAGTTCATTCCTCAAATGAGACAA
* *
70617 ACAT-GAATTCTGGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAATACATTCTCCTCA
708 ACATAG-ATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAACACATTCTCCTCA
*
70681 TTAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTA
772 TTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTA
*
70746 AAATCAAAGTTTGTATTTTAATTGAGACATGCATTGATTCTCGTAAAAGTATCCATTCTTTCCAA
837 AAATCAAAGTTTGTATTTTAATTGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAA
*
70811 GATTAGGATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTG
902 GATTA-GAACCAAAAACACTTTCCCTTCATTAGGATAAATGACATTG
* * ** *
70858 ATGCTTTGGTGTTGCAAGAGAAGCTTTTTTTTCCACCGTTAACAATACAATCAAAGTTTGTCTCT
1 ATGCTTTGGTGCTGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCT
* * *
70923 TAAATAAGACAAACATGAATACTCGTACTAATCCCCATTCTTTTCAGGATTAAGCACCATAAACA
66 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACA
* * **
70988 TAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGTTTTTTTCCCATT
131 TAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACC
* **
71053 AATTTCTGTAAATTCTTTGTTCATGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCA
196 AATTTCTGTAAATTATAAGTTCATGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCA
* ** *
71118 TTTATTTCGTGATTAGGGACTATAAACACAATCTCCTTGTCACGATGCATGATATTGATGGTTTT
261 TTTATTTCGTGATTAGGCACTATAAACACAATCTCCTCATCACGATACATGATATTGATGGTTTT
* *
71183 CTTTTGCAAGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATGAG
326 CTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
* * * *
71248 -CAAGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGAGAACCAAAAACAAATTCCTT
391 ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT-AAGATTGGGAACCAAAAACACATTCCTT
* * * *
71312 TCATTAGGATACATGACATTGATACATTGGTCTCGCAAGAGAAGCCTTTCTTTCCACCGTTATTA
455 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG-CTTTCTTTCCACCGTTATTG
* *
71377 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACAAATCTACATTCTTTT
519 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTT
* * * *
71442 TTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACCTGATAATGATGCTTTGGATTCGC
584 CTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGC
71507 AAGAAATGCTTTTTTCCCCCCAATTTTTGTAATATATAAGTTCATTCCTCAAATGAGACAAACAT
649 AAGAAATGC-TTTTTCCCCCCAATTTTTGTAA-ATATAAGTTCATTCCTCAAATGAGACAAACAT
* * * *
71572 AGATTCTAGTAAGGATCTTCTTTCATTTCGGGAGTAGGCATTATAAACACTTTCTCCTCATTAGG
712 AGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAACACATTCTCCTCATTAGG
* * * * *
71637 ATAAATGATATTAATGGGTTTCTTTTGCCTGGAAATCTTTTGTTTGCCTCATTTTCCTTAGAATC
777 ATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATC
* * * *
71702 AAAGTTTGTATTTTAATTGAGACATGCATCGATTCTCATAAAAGTCTCCACTCTTTCCGAGATTA
842 AAAGTTTGTATTTTAATTGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTA
* * * *
71767 GGATCGAAGAACACTTTCCCTTCATTAGGATAAATGACGTTG
907 -GAACCAAAAACACTTTCCCTTCATTAGGATAAATGACATTG
*
71809 ATGCTTTGGTGCTGCAAGAGAAGCTTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTC
1 ATGCTTTGGTGCTGCAAGAGAAGC-TTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTC
* *
71874 TTAAATAAGACAAACATGAACACTCATACTAATCCCCATT-TTTTTCAAGATTAGGCACCATAAA
65 TTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTT-AGGATTAGGCACCATAAA
* * *
71938 TATAGTCTTCTCTTAAGGATAAAGGATATTGATGATTTTGTTTCGCAAGAAATGCTTTTTTCCCA
129 CATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCA
* * * * *
72003 TCAATTTCTGTAAATTTTATGTTCGTGCCACAAATGAGACAAACATAGATTCTAGTAAGGATCTT
194 CCAATTTCTGTAAATTATAAGTTCATGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTT
* * * **
72068 CATTTATTTCATGATTAGGGACAATAAACACAATCTCCTTGTCACGATACATGATATTGATGGTT
259 CATTTATTTCGTGATTAGGCACTATAAACACAATCTCCTCATCACGATACATGATATTGATGGTT
*
72133 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATG
324 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
* *
72198 AGACATGCATTGATTCTTGCAAAAGTCTCCATTCGTTTTAAGATTGGGAACCAAAAACACATTCC
389 AGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTTAAGATTGGGAACCAAAAACACATTCC
* * * *
72263 CTTCATTAGGATACCTGACGTTGATGCTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTAT
453 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTT-TCTTTCCACCGTTAT
* *
72328 TGATAGAATCAAAGTTCGTCTCTTAATTAAGACAAACATGAATACTCATACTAATCCACATTCTT
517 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTT
* * ** * * * *
72393 TTCTGTATAAGGCACTGTAAACATAGTGTTCTCATAAGGATAAATGATATTGACGCTTTGGTTTT
582 TTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTC
** * *
72458 GCAAGAAACACTTTATTGCCCCCAATTTTTGTAAAGTATAAGTTCATTCCTCAAATTAGACAAAC
647 GCAAGAAATGCTTT-TTCCCCCCAATTTTTGTAAA-TATAAGTTCATTCCTCAAATGAGACAAAC
* * * *
72523 ATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACAGACTCTCCTCATTA
710 ATAGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAACACATTCTCCTCATTA
* * * *
72588 GGATAAATGATACTGATGGTTTTCTTTTGCATGTAAATCTTTTCTTTGCATTATTTTCCTTAAAA
775 GGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAA
* * * *
72653 TCAAAGTTTGCATTTTAAATGAGACATGCATTAATTCTCGTAAAAGTCTCCATTCTTTTCAAGAT
840 TCAAAGTTTGTATTTTAATTGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGAT
* ** * *
72718 TGAGAACCAAAAGCAAATTCCTTTCATTAGGATACATGACATTG
905 T-AGAACCAAAAACACTTTCCCTTCATTAGGATAAATGACATTG
* * * * * *
72762 ATACTTTGGT-CTCGCAAGAGAAGCCTTTCTTTCCA-CGATTATTAATAGAATCAAAGTTTATCT
1 ATGCTTTGGTGCT-GCAAGAGAAGCTTTTCTTTCCACCG-TTAATGATAAAATCAAAGTTTGTCT
* ** *
72825 CTTAAATAAGACAAACATGAATACTCATACAAATCTACATTCTTTTTTGGATTAGGCACCATAAA
64 CTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAA
*** * * * *
72890 CATAGTCTTCTCATAAGGATACCTGATAATGATGCTTTGGATTCGCAAGAAATGCTTTTTTCCCC
129 CATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCA
* *
72955 CCAATTTTTGT-AATATATAAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCT
194 CCAATTTCTGTAAAT-TATAAGTTCATGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCT
* * ** * * * *
73019 TC-TTTCATTTCGGGATTAGGCATTATAAACACTTTCTCCTCATTAGGATAAATGATATTAATGG
258 TCATTT-ATTTCGTGATTAGGCACTATAAACACAATCTCCTCATCACGATACATGATATTGATGG
* * * * * *
73083 GTTTCTTTTGCCTGGAAATCTTTTGTTTGCCTCATTTTCCTTAGAATCAAAGTTTGTATTTTTAA
322 TTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA-CTTTAA
* * * ** * * * *
73148 TTGAGACATGCATCGATTCTCGTAAAAGTCTCCACTCTTTCCGAGATTAGGATCGAAAAACACTT
386 ATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTT-TAAGATTGGGAACCAAAAACACAT
* * * *
73213 TCCCTTCATTAGGATAAATGACGTTGATGCTTTGGTG-CTGCAAGAGAAGCTTTTTTTTCCACCG
450 TCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTC-GCAAGAGAAGC-TTTCTTTCCACCG
* * * *
73277 TTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAACACTCATACTAATCCCCAT
513 TTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACAT
** * * * * * *
73342 TCTTTTCAAGATTAGGCACCATAAATATAGTCTTCTCTTAAGGATAAAGGATATTGATGATTTTG
578 TCTTTTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGG
** * * * * * *
73407 TTTCGCAAGAAATGCTTTTTTCCCATCAATTTCTGTAAATTTTATGTTCGTGCCACAAATGAGAC
643 TTTCGCAAGAAATGC-TTTTTCCCCCCAATTTTTGTAAA-TATAAGTTCATTCCTCAAATGAGAC
* * * * * *
73472 AAACATAGATTCTAGTAAGGATCTTCATTTATTTCGTGATTAGGGACAATAAACACAATCTCCTT
706 AAACATAGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAACACATTCTCCTC
* * * * *
73537 GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTT
771 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTT
* * * * *
73602 AAAATCAAAGATTGTATTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCGTTT-T
836 AAAATCAAAGTTTGTATTTTAATTGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTCC
* * ** *
73666 AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACCTGACGTTG
900 AAGATT-AGAACCAAAAACACTTTCCCTTCATTAGGATAAATGACATTG
* * * * * * *
73715 ATGCTTTAGTG-TCGCAAGAAAAGCTTGTCTTTCCACCGTTATTGATAGAATCGAAGTTCGTCTC
1 ATGCTTTGGTGCT-GCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTC
* * * * * **
73779 TTAATTAAGACAAACATGAATACTCATACTAATCCACATTCTTTTTTGTATAAGGCACTGTAAAC
65 TTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAAC
* * * * * ** *
73844 ATAGTGTTCTCATAAGGATAAATGATATTGACGCTTTGGTTTTGCAAGAAACACTTTCTTGCCC-
130 ATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTT-TTTCCCA
* * * * *
73908 CCAATTTTTGTAAAGTATAAGTTCATTCCTCAAATTAGACAAACATGGATTCTAGTAAGGATCTT
194 CCAATTTCTGTAAATTATAAGTTCATGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTT
* * * * * *
73973 CATTCATTTCGTGATTAGGCACTATAAACAGACTCTCCTCATTAGGATAAATGATATTGATGGTT
259 CATTTATTTCGTGATTAGGCACTATAAACACAATCTCCTCATCACGATACATGATATTGATGGTT
* * * *
74038 TTCTTTTGCTTGTAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATA
324 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
* * * *
74103 AGACATGCATTAATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGAGAACCAAAAGCAAATTCC
389 AGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT-AAGATTGGGAACCAAAAACACATTCC
* *
74168 TTTCATTAGGATACATGACATTGATACTTTGGTCTCGCAAGAGAAGCCTTTCTTTCCA-CGATTA
453 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG-CTTTCTTTCCACCG-TTA
* * * *
74232 TTAATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACAAATCTACATTCT
516 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCT
* * * *
74297 TTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACCTGATAATGATGCTTTGGATT
581 TTTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
74362 CGCAAGAAATGCTTTTTTCCCCCCAATTTTTGTAATATATAAGTTCATTCCTCAAATGAGACAAA
646 CGCAAGAAATGC-TTTTTCCCCCCAATTTTTGTAA-ATATAAGTTCATTCCTCAAATGAGACAAA
* * *
74427 CATAGATTCTAGTAAGGATCTTCTTTCATTTCGGGATTAGGCATTATAAACACTTTCTCCTCATT
709 CATAGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAACACATTCTCCTCATT
** * * *
74492 AGGATAAATGATATAAATGGGTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTCATTTTCCTTAGA
774 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAA
* * *
74557 ATCAAAGTTTGTATTTTAATTGAGACATGCATTGATTC-CAATAAAAGTCTCCACTATTTCCAAG
839 ATCAAAGTTTGTATTTTAATTGAGACATGCATTGATTCTC-GTAAAAGTCTCCATTCTTTCCAAG
74621 ATTAGAATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTG
903 ATTAGAA-CCAAAAACACTTTCCCTTCATTAGGATAAATGACATTG
* * *
74667 ATGCTTTGGTGCTGTAAGAGAAGCTTTTTTTTCCACCGTTAATGATAAAATCAAAG-TT-TATCT
1 ATGCTTTGGTGCTGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCT
* * * *
74730 T---TAAGACAAACATGAACACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATGAATA
66 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACA
* * * *
74792 TAGTCTTCCCATAAGGATAAAGGATATTGATGATTTTGTTTCGTAAGAAATGCTTTTTTCCCATC
131 TAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACC
* * * *
74857 AATTTCTGTAAATTCTATGTTCGTGCCACAAATGAGACAAACATAGATTCTAGTAAGGATCTTCA
196 AATTTCTGTAAATTATAAGTTCATGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCA
* * *
74922 TTTATTTCGTGATTAGGGACAATAAACACAATCTCC-CTGTCACGATACATGATATTGATGGTTT
261 TTTATTTCGTGATTAGGCACTATAAACACAATCTCCTC-ATCACGATACATGATATTGATGGTTT
74986 T
325 T
74987 AAGATTGGGA
Statistics
Matches: 3596, Mismatches: 487, Indels: 94
0.86 0.12 0.02
Matches are distributed among these distances:
946 6 0.00
947 213 0.06
948 248 0.07
949 356 0.10
950 6 0.00
951 273 0.08
952 1163 0.32
953 1307 0.36
954 24 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (947 bp):
ATGCTTTGGTGCTGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCT
TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACA
TAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACC
AATTTCTGTAAATTATAAGTTCATGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCA
TTTATTTCGTGATTAGGCACTATAAACACAATCTCCTCATCACGATACATGATATTGATGGTTTT
CTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTAAGATTGGGAACCAAAAACACATTCCTTT
CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTCTTTCCACCGTTATTGAT
AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCT
GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
GAAATGCTTTTTCCCCCCAATTTTTGTAAATATAAGTTCATTCCTCAAATGAGACAAACATAGAT
TCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
ATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAG
TTTGTATTTTAATTGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTAGAAC
CAAAAACACTTTCCCTTCATTAGGATAAATGACATTG
Found at i:75313 original size:375 final size:369
Alignment explanation
Indices: 74629--75313 Score: 996
Period size: 375 Copynumber: 1.8 Consensus size: 369
74619 AGATTAGAAT
* * * *
74629 CCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGCTGTAAGAGAAGCTTT
1 CCAAAAACACATTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGCTGCAAGAAAAGCTTG
*
74694 TTTTTCCACCGTTAATGATAAAATCAAAGTTTATCTTTAAGACAAACATGAACACTCATACTAAT
66 TCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTTTAAGACAAACATGAACACTCATACTAAT
* * *
74759 CCCCATTCTTTTCAGGATTAGGCACCATGAATATAGTCTTCCCATAAGGATAAAGGATATTGATG
131 CCACATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCCCATAAGGATAAAGGATATTGATG
* * ** *
74824 ATTTTGTTTCGTAAGAAATGCTTTTTTCCCATCAATTTCTGTAAATTCTATGTTCGTGCCACAAA
196 ATTTGGTTTCGCAAGAAACACTTTTTTCCCATCAATTTCTGTAAATTCTAAGTTCGTGCCACAAA
*
74889 TGAGACAAACATAGATTCTAGTAAGGATCTTCATTTATTTCGTGATTAGGGACAATAAACACAAT
261 TGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGGACAATAAACACAAT
74954 CTCCCTGTCACGATACATGATATTGATGGTTTTAAGATTGGGAA
326 CTCCCTGTCACGATACATGATATTGATGGTTTTAAGATTGGGAA
* *
74998 CCAAAAACACATTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTG-TAGCAAGAAAAGCTT
1 CCAAAAACACATTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGCT-GCAAGAAAAGCTT
* * * * * *
75062 GTCTTTCCACCGTTATTGATAGAATCAACGTTTGTCTCTTAAAATGAGATAAACATGAATACTCA
65 GTCTTTCCACCGTTAATGATAAAATCAAAGTTTATCT-TT---A--AGACAAACATGAACACTCA
* * * * * *
75127 TGCTAATGCATATTCTTTTCTGGATTAGGCACCGTAAACATAGTCTTCTCATAAGGATACAA-GA
124 TACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCCCATAAGGATA-AAGGA
*
75191 TATTGATGATTTGGTTTCGCAAGAAACACTTTTTTCCCATCAATTTTTGTAAATTCTAAGTTCGT
188 TATTGATGATTTGGTTTCGCAAGAAACACTTTTTTCCCATCAATTTCTGTAAATTCTAAGTTCGT
* * *
75256 GCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTTATTCATTTCGTGATTAGG
253 GCCACAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
75314 CATTGTAAAC
Statistics
Matches: 276, Mismatches: 32, Indels: 10
0.87 0.10 0.03
Matches are distributed among these distances:
368 1 0.00
369 88 0.32
370 2 0.01
373 1 0.00
375 182 0.66
376 2 0.01
ACGTcount: A:0.32, C:0.18, G:0.16, T:0.34
Consensus pattern (369 bp):
CCAAAAACACATTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGCTGCAAGAAAAGCTTG
TCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTTTAAGACAAACATGAACACTCATACTAAT
CCACATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCCCATAAGGATAAAGGATATTGATG
ATTTGGTTTCGCAAGAAACACTTTTTTCCCATCAATTTCTGTAAATTCTAAGTTCGTGCCACAAA
TGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGGACAATAAACACAAT
CTCCCTGTCACGATACATGATATTGATGGTTTTAAGATTGGGAA
Found at i:75880 original size:476 final size:476
Alignment explanation
Indices: 74983--87501 Score: 15640
Period size: 476 Copynumber: 26.5 Consensus size: 476
74973 ATATTGATGG
* *
74983 TTTT-AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * * *
75047 TAGCAAGAAAAGCTTGTCTTTCCACCGTTATTGATAGAATCAACGTTTGTCTCTTAAAATGAGAT
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTT-AAATAAGAC
* * ** ** *
75112 AAACATGAATACTCATGCTAATGCATATTCTTTTCTGGATTAGGCACCGTAAACATAGTCTTCTC
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTC
* *
75177 ATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACACTTTTTTCCCATCAATTTTTGTA
195 ATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTA
*
75242 AATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTTATTCATTTCGT
260 AATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGT
* * * *
75307 GATTAGGCATTGTAAACACATTCTCCTCATTAGGATAAATGATATTTATGGTTTTCTTTCGCAT-
325 GATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATG
* * * * *
75371 AGAAATCTTTTCTATGCCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAAAAGGGACAAGCATT
390 A-AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
*
75436 TATTCTCGTAAAAGTCTCCAATC
454 GATTCTCGTAAAAGTCTCCAATC
* *
75459 CTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGGTGCTTTGGTG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * * *
75524 TCACAAGAAAAGCTTTTCTATCTACCGTTATTGATAGAATCAAAGTTTGCCTTTTAAATAAGACA
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* *
75589 AATATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTCT
131 AACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTCA
* ** ** * * *
75654 TAAGGATGCAAGATATTGATCCTTTTCTTTCACAAGAAACACTTTCTTCCCACCAATTTTTGTAA
196 TAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAA
* * * *
75719 ATTCTAAGTCCGTGCCTTAAATGAGACAAACACGGATTCTAGTAAGGATCTTCATTCATTTTGTG
261 ATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTG
* * *
75784 ATTAAGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTTATGGTTTTCTTTTGCATGA
326 ATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGA
* * *
75849 AAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTATTTTAATTGAGACATGCATTGA
391 AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGA
*
75914 TTCTCGTAAAAGTCTCCATTC
456 TTCTCGTAAAAGTCTCCAATC
* * * * * ** *
75935 TTTCCAAGATTAGGATCCAAAAACACTTTCCCTTCATTTTGATAAATGACATTGATGCTTTGGTG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* *
76000 TTGCAAGAGAAGCTTTTTTTTCCATCC-TTA---AT-G-AT---A-----------AAAT----C
66 TCGCAAGAGAAGCTTTTCTTTCCA-CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* *
76041 AAACATGAATACTCGTACTAATCCCCATTCTTTT-CAGGATTAGGCACCATAAACATAGTATTCT
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAAACATAGTCTTCT
* * ** * *
76105 CATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCATTAATTTCTCT
194 CATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGT
* * * *
76170 AAATTCTATGTTCTTGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTTATTTCG
259 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
* * * * * * * *
76235 TGATTAGGGACAATAAACACAATCTCCTCGTCACGATACATGATATTGATGGTTTTCTTTTCCAT
324 TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCAT
* *
76300 GGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGACATGCATT
389 GAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
* * * *
76365 GTTTCTTGTAAAAGTTTCC-ATT
454 GATTCTCGTAAAAGTCTCCAATC
* * * *
76387 TGTTTTAAGATTGGGAACCAAAAACACATTCCCTTCACTAGGATACATGACGTTGATGCTTTGGT
1 T-TTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGT
* * * *
76452 GTCGCAAGAAAAGCTTGTCTTTCCACCGTTATTGATAGAATCAAAGTTCGTCTCTTAATTAAGAC
65 GTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * * * *
76517 AAACATGAATACTCATACTAATCCACATTCTTTT-CTGTATAAGGCACCGTAAACATAGTGTTCT
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCAG-ATTAGGCACCATAAACATAGTCTTCT
* * * *
76581 CATAAGGATA-AATGATATTGATGCTTTGGTTTTGCAAGAAACAC----TGCCC-CCAATTTTTG
194 CATAAGGATACAA-GATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTG
* * * * *
76640 TAAAGTATAAGTTCATTCCTCAAATTAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTC
258 TAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTC
* * *
76705 GTGATTAGGCACTATAAACAGACTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGTA
323 GTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCA
* * *
76770 TGTAAATCTTTTCTTTGCCTTACTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGACATGCAT
388 TGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
* *
76835 TGATTCTCATAAAAGTCTCCATTC
453 TGATTCTCGTAAAAGTCTCCAATC
* * * * * *
76859 TTTTCAAGATTGAGAACCAAAAACAAATTCCTTTCATTTGGATACATGACATTGATACTTTGATC
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* *
76924 TCGCAAGAGAAGCCTTTCTTTCCACCGTTATTAATAGAATCAAAGTTTGTCTCTTAAATAAGACA
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* * ** ***
76989 AACATAAATACTCATACAAATCTACATTCTTTTTTGGATTAGGCACCATAAACATAGTCTTCTCA
131 AACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTCA
** * * * * *
77054 TAAGGATACCTGATAATGATGCTTTGGATTCGCAAGAAATGCTTTTTTCCCCCCAATTTTTGT-A
196 TAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAA
* * * * * * *
77118 ATATATGAGTTCATTCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCTTTCATTTCGG
261 AT-TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGT
* * * * * *
77183 GATTAGGCATTATAAACACCTTTCTCCTCATTAGGATAAATGATATTAATGGGTTTCTTTTACCT
325 GATTAGGCACTATAAACA-CATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCAT
* * * * *
77248 -AGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCCAATTTTGTATTTTAATTGAGACATGCAT
389 GA-AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
* *
77312 TGATTCTCGTAAAAGTGTCCACTC
453 TGATTCTCGTAAAAGTCTCCAATC
* * * * * *
77336 TTTCCAAGATTAGGATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * *
77401 -CTGCAAGAGAAGCTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTATCTCTTAAATAAGAC
66 TC-GCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* *
77465 AAACATGAACACTCATACTAATCCCCATTCTTTT-CAGGATTAGGCACCATAAATATAGTCTTCT
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAAACATAGTCTTCT
* * * * * *
77529 TATAAGGATA-AAGGATATTGATGATTTTGTTTCACAAGAAATGCTTTTTTCCCATCAA-TTTTA
194 CATAAGGATACAA-GATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTG
* * * * * *
77592 TAAATTCTATGTTCGTGCCACAAATGAGACAATCATAGATTCTAGTATGGATCTTCATTTATTTC
258 TAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTC
* * * ** * * **
77657 GTGATTAGGGACAATAAACACAATCTCCTTGTCACGATACTTGATATTGATGGTTTTCTTTTGCA
323 GTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCA
* *
77722 TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGACATGCAT
388 TGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
* *
77787 TGATTCTTGCAAAAG---------
453 TGATTCTCGTAAAAGTCTCCAATC
* * * *
77802 ---T-AAGATTGGGATCCAAAATCACATTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * *
77863 TCGCAAGAAAAGCTTGTCTTTCCACCGTTATTGATAGAATCAACGTTTGTCTCTTAAAATGAGAT
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTT-AAATAAGAC
* * ** * * *
77928 AAACATGAATACTCATGCTAATGCATATTCTTTTTCGGATTAGGCACCGTAAACATAGTCTTCTC
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTC
* *
77993 ATAAGGATA-AATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTGCCC-CCAATTTTTG
195 ATAAGGATACAA-GATATTGATGATTTGGTTTCGCAAGAAACGCTTT-TTTCCCACCAATTTTTG
*** * * * * * *
78056 TAAAGAATAAGTTCATTCCTAAAATTAGACAAACATGAATTCTAGCAAGGATCTTCATTCATTTC
258 TAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTC
* * * * *
78121 GTGGTTAGACACTGTAAACGCATTCTCCTCATTGGGATAAATGATATTGATGGTTTTCTTTTGCA
323 GTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCA
* * * * * * *
78186 TTAAAATCTTTTCTTTGCCTCA-TTTCCTT-AGATAAAAGTTTGTGCTCTAAATGAGACATGCTT
388 TGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
* *
78249 TGATTCTCATAAAAGTCTCCATTC
453 TGATTCTCGTAAAAGTCTCCAATC
* * * * * * *
78273 TTTCCAAGACTGGGATCTC-AAAGCACATTCCCTTCATTAGGATACATGACACTGATGCTTTGCT
1 TTTTCAAGATTGGGAAC-CAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * * * * * *
78337 CTCACAAGAAAAGCTTTTCTTCCCATCGTTAATGAGAAAATCAAAGTTTGTCACTTAAAT-A-AC
65 GTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * *
78400 --ACATGAATACTCATACTAATCCTCATTCTTTTCAAGATTAGGCACCGTAAACATAGTCTTCTC
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTC
* * * * * *
78463 ATAAGGATACAGGATATTAATGATTTGATTTCGCAAGAAACGTTTTTTTCCCATCAATTTTTTTA
195 ATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTA
* *
78528 AATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAATAAGGATCTTCATTCATTTCGT
260 AATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGT
* * * *
78593 TATTAGGCACTATAAGCACATTCTCCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGAATG
325 GATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATG
* *
78658 AAAA-----TCTATACCTTATTTTCCTTAAAATCAAAGTTTGTACTTT--A--A-A-ATGCATTG
390 AAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
* *
78712 ATTCTCGCAAAAGTCTCCTATC
455 ATTCTCGTAAAAGTCTCCAATC
** *
78734 TTTTCGTGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGGG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * * *
78799 TCGCGAGAGAAGCTTTTCTCTCTACCGTTATTGATAGAATCAAAGTTTGCCTTTTATATAAGACA
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* *
78864 AACATGAATACTCATACTAATCCCTATTCTTTTCCAGGTTAGGCACCATAAACATAGTCTTCTCA
131 AACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTCA
* * * * *
78929 TGAGGATACAAGATATTGATGCTTTGCTTTCGCAATAAACGCTTTTTTCCCATCAATTTTTGTAA
196 TAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAA
*
78994 ATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTTATTCATTTCGTG
261 ATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTG
* * *
79059 ATTAGGCATTGTAAACACATTCTCCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGCAT-A
326 ATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGA
* * * *
79123 GAAATCTTTTCTTTGCCTTATTTTTCTTAAAATCAAAGTTTGTTCTTTAAAAGAGACAAGCATTG
391 -AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
*
79188 ATTCTCATAAAAGTCTCCAATC
455 ATTCTCGTAAAAGTCTCCAATC
*
79210 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGGTGCTTTGGTG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * *
79275 TCGCAAGAGAAGCTTTTCTCTCTACCGTTATTGATAGAATCAAAGTTTGCCTTTTATATAAGACA
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* *
79340 AACATGAATACTCATACTAATCCCTATTCTTTTCCAGGTTAGGCACCATAAACATAGTCTTCTCA
131 AACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTCA
* * * * *
79405 TAAGGATACAAGATATTGATGCTTTGCTTTCACAAGAAACACTTTCTTCCCACCAATTTTTGTAA
196 TAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAA
* *
79470 ATTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATG
261 ATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTG
*
79535 ATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGA
326 ATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGA
*
79600 AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCACTGA
391 AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGA
* *
79665 TTCTCATAAAAGTCTCCATTC
456 TTCTCGTAAAAGTCTCCAATC
* * * * *
79686 TTTTTAAG-TATGGG-ACCAAAAACATATTCCCTTCATTAGAATACATGACATTGATGCTTTTGT
1 TTTTCAAGAT-TGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * * * **
79749 GTTGCAAGAGAAGCTTTTCTTTCTACCGTTAATGATAAAATCAAAATTTGTC-CCT---TAAGGG
65 GTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * *
79810 AAACATGAATACTCATACTAGTCCCCATTCTTTT-TAGGATTAGGCACCCTAAACATAGTCTTCT
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAAACATAGTCTTCT
* * * * * *
79874 CATACGGATACAAGAGAATGATGATTTAGTTTCGCAAGAAACACTTTTTTCCGACCAATTTTTGT
194 CATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGT
* *
79939 AAATTCCAAGTTCGTGCCTCAAATGAGACAAACATGGATTCCAGTAAGGATCTTCATTCATTTCG
259 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
* * *
80004 TGATTAGGCGCTATAAACACATTCTACTCATTAGGATAAATGATATTTATGGTTTTCTTTTGCAT
324 TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCAT
* * *
80069 GGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGCACCTTAAATGAGACATGCATT
389 GAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
* * * **
80134 GATTCTCATAAAATTGTCCTTTC
454 GATTCTCGTAAAAGTCTCCAATC
*
80157 TTTTCAAGATTGGGAACCAAAAACACATT-CTCTTCATTAGGATACATGACATTAATGCTTTGGT
1 TTTTCAAGATTGGGAACCAAAAACACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGT
** * *
80221 GTCGCAAGAGAAGCTGCTCTTTCCACCGTTATTTATAGAATCAAAGTTTGTCTCTTAAACAAGAC
65 GTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * * ** * * ** *
80286 AAACTTGAATAGTCATACCAATCCATATTCTTTTCTATATTACACACCACCAGAAACATAGTCTT
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATT--A-GGCACCATAAACATAGTCTT
* * * * *
80351 CTCATAAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAACGCTCTCTTCCCACCAATTTTT
192 CTCATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTT
* * * * * * * * *
80416 GTAAAGTATACGTTCATTCTTCAAATCAGACAAACATGGATTCTAGTAGGGATCTTTATTCATTT
257 GTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTT
* ** * * *
80481 CATGATTAGGCACTATAAATGCATTCTCCCCGTTAGGATAAATGATATTGATGGTTTTCTTTTAC
322 CGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGC
* * * * *
80546 CTG-AAATCTTTTATTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCA
387 ATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
* * *
80610 TCGATTCTCATAAAAGTCTCCATTC
452 TTGATTCTCGTAAAAGTCTCCAATC
* * * * *
80635 TTTCCAAGATTAGGAACC--AAACACA-TCCTCCTCACTAGGATACTTGACATTGATGCTTTGGT
1 TTTTCAAGATTGGGAACCAAAAACACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGT
* * *
80697 GTCGCAAGAGAAGCTTTTCTTTCC-CCTGCTAATGATA-AGATCAAAGTTTGTCTCTTAAATAAC
65 GTCGCAAGAGAAGCTTTTCTTTCCACC-GTTATTGATAGA-ATCAAAGTTTGTCTCTTAAATAAG
* * * * *
80760 ACAAACATGAATAGTCATACTAATACCCATTCTTTTCCGGATTTGGCACCATAAACATAGACTTC
128 ACAAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTC
* * * ** * *
80825 TCATAAGGATACATGATATTGATGCTTTGCTTTCGCAAGAAAAACTTTCTTCCCACCAAATTTTG
193 TCATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTG
* * *
80890 TAAATTCTAAGTTCGTGCCTCAAATGAGGCAAACATGGATTCTAGTATGGATCTTCGTTCATTTC
258 TAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTC
* *
80955 GTGATTAGGCACTATAAACACTTTCTCCTTATTAGGATAAATGATATTGATGGTTTTCTTTTGCA
323 GTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCA
81020 TGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
388 TGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
* *
81085 TGATTCTCATAAAAGTCTCCATTC
453 TGATTCTCGTAAAAGTCTCCAATC
* * * * * *
81109 TTTCCAAGATTGAGAACCAAAAACACATTCCCTTCATTAGAATACATGAAATTGATGCTTTTGTG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * * * *
81174 TTGCAAGAGAAGCTTTTCTTTCTACCGTTAATGATAAAATCAAAATTTGTC-CCT---TAAGAGA
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* * * *
81235 AACACGAAAACTCATACTAATCCCCATTCTTTT-TAGGATTAGGCACCCTAAACATAGTCTTCTC
131 AACATGAATACTCATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAAACATAGTCTTCTC
* * * * * * *
81299 ATATGGATGCAAGAGAATGTTGATTTAGTTTCGCAAGAAACGTTTTTTTCCCACCAATTTTTGTA
195 ATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTA
*
81364 AATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGC
260 AATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGT
* * * *
81429 GATTATGCACTATAAACACATTCTCTTCATTAGGATAAATGATAATAATGGTTTTCTTTTGCATG
325 GATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATG
* * *
81494 GAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGCACCTTAAATGAGACATGCATTG
390 AAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
* * * **
81559 ATTCTCATAAAATTGTCCTTTC
455 ATTCTCGTAAAAGTCTCCAATC
*
81581 TTTTCAAGATTGGGAACCAAAAACACATT-CTCTTCATTAGGATACATGACATTAATGCTTTGGT
1 TTTTCAAGATTGGGAACCAAAAACACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGT
* * * *
81645 GTCGCAAGAGAAGCTGTTCTTTCCACTGTTATTTATAGAATCAAAGTTTTTCTCTTAAATAAGAC
65 GTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * * ** * * ** *
81710 AAACTTGAATAGTCATACCAATCCATATTCTTTTCTATATTACACACCAGAAACATAGTCTTCTC
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTC
* * * * *
81775 ATAAGGATACATGATATTGATGCTTTGGTTTCGTAAGAAACGCTCTCTTCCCACCAATTTTTGTA
195 ATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTA
* * * * * * * * * *
81840 AAGTATACGTTCATTCTTCAAATCAGACAAACATGGATTCTAGTAGGGATCTTTATTCATTTCAT
260 AATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGT
* * * * *
81905 GATTAGGCACTATAAACGCATTCTCCCCGTTAGGATAAATGATATTGATGGTTTTCTTTTACCT-
325 GATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATG
* * * * * * *
81969 ACAATCTTTTATTTGCCTCACTTTCCTTAAAATCATAGTTTGTACTTTAAATGAGACAAGCATCG
390 AAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
*
82034 ATTCTCGTAAAAGTCTCCATTC
455 ATTCTCGTAAAAGTCTCCAATC
* *
82056 TTTCCAAGATTAGGAACC--AAACACATT-CTCTTCATTAGGATACATGACATTGATGCTTTGGT
1 TTTTCAAGATTGGGAACCAAAAACACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGT
** * *
82118 GTCGCAAGAGAAGCTTTTCTTTCCACTATTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGAC
65 GTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* *
82183 AAACATGAATACTCATACTAATACCCATTCTTTT-CAGGATTAGGCACCATAAAAATAGTCTTCT
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAAACATAGTCTTCT
** * * * * *
82247 CATAAGGATACTGGATATTAATGATTTGGTTTTGCAAGAAACGGTTTTTTCTCACCAATTTTTGC
194 CATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGT
* * ** * *
82312 AAATTCTAAGTTCGTGCCTCAAATAAAACAAACATAAATTCTAGTGAGGATCTTTATTCATTTCG
259 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
* * * * *
82377 TGACTAGGCACTATAAATACATTCTCCTCATTAGGATACATGATATTGATGATTTTCTTTTGCGT
324 TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCAT
*
82442 GAAAATCTTTTCTTTGCCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
389 GAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
* *
82507 AATTC-CTGTAAAAGTCTCCATTC
454 GATTCTC-GTAAAAGTCTCCAATC
* *
82530 TTTTTAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACAAGACATTGATGCTTTGGTG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * *
82595 TCGCAAGAGAAGCTTGTCTTTCCATCGTTATTGATAGAATCAAAGTTTATCTCTTAAATAAAATA
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* * ** *
82660 AACATGAATACTCATACTAATCCACAATCTTTTGTAGATTAGGCACCATAAAAATAGTCTTCTCA
131 AACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTCA
82725 TAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAA
196 TAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAA
* * *
82790 ATTCTAAGTTCGTGCCTCAAATGAGACAGACATGGATTCTAGCAACGATCTTCATTCATTTCGTG
261 ATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTG
* * *
82855 ATTAGGCACTATAAACACATTCTCCTTATTAGGATACATGATATTGATGGTTTTCTTTTGCATGG
326 ATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGA
* *
82920 AAATCTTTTCTTTGCCTTATTTTCTTTAAAATCAAAGTTTGTACATTAAATGAGACATGCATTGA
391 AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGA
* *
82985 TTCTCGTAAAAGTCTCCACTA
456 TTCTCGTAAAAGTCTCCAATC
* * * * *
83006 TTTCCAAGATTAGGATCCAAAAACACTTTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * *
83071 TCGCAAGAGAAGCTTGTCTTTCCATCGTTATTGATAGAATCAAAGTTTATCTCTTAAATAAAATA
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
** ** *
83136 AACATGAATACTCATACTAATCCATATTCTTTTGTAGATTAGGCACCATAAAAATAGTCTTCTCA
131 AACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTCA
*
83201 TAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAA
196 TAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAA
* * * *
83266 ATTCTAAGTTCGTGCCTCAAATGAGACAGACATGGATTCTAGCAAGGATCATCATTTATTTCGTG
261 ATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTG
* * * * *
83331 ATTAGGCACTATAAACACATTCTCCTTATTAGGACACATGATATTGACGGTTTTCTTTTGCATGG
326 ATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGA
*
83396 AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCACTGA
391 AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGA
*
83461 TTCTCGTAAAAGTCTCC-ATT
456 TTCTCGTAAAAGTCTCCAATC
*
83481 TTTTCCAAGATTGGGAACCAAAAACACATTACC-TTCATAAGGATACATGACATTGATGCTTTGG
1 TTTT-CAAGATTGGGAACCAAAAACACATT-CCTTTCATTAGGATACATGACATTGATGCTTTGG
* * * * *
83545 TGTCGCAGGAGAAGCTTTTCTTTCCAACATTATTGATAAAATCAAAGTTTGCCTC-T---T----
64 TGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGA
** * * *
83602 -----A--AATACTCATACTAATCCATATTCCTTTCAAGATTAGGCACCATAAACACAGTCTTCT
129 CAAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCT
* * * * ** * *
83660 CATACGGATATAGGATATTGATGATTTGGTTTAGCAAGAAATACTTTTTTCCCACCAATGTTTAT
194 CATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGT
* * * * * *
83725 AAATTCTAAGTTCTTGCCTTAAATGAGATAGACATGCATTCTAGTAATGATCTTCATTCATTTCG
259 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
* * * *
83790 TGATTAGGCACTCTAAACACATTCTCCTCATTAGGATACAA-GGTATTGAGGGTTTTCTTTTGCT
324 TGATTAGGCACTATAAACACATTCTCCTCATTAGGATA-AATGATATTGATGGTTTTCTTTTGCA
*
83854 TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
388 TGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
* *
83919 TGGTTCTCGTAAAAGTCTCCATTC
453 TGATTCTCGTAAAAGTCTCCAATC
* *
83943 TTTCCAAGATTGGGAACCAAAAGCACATTACC-TTCATTAGGATACATGACATTGATGCTTTGGT
1 TTTTCAAGATTGGGAACCAAAAACACATT-CCTTTCATTAGGATACATGACATTGATGCTTTGGT
* * * *
84007 GTCGCAAGAGAAGCTTTTCTTTCCAACATTATTGATAAAATCAAAGTTTGCCTCTTAAATAA-AG
65 GTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGA-
** * * * *
84071 CAAGTATGAATACTCATACTAATCCACATTCCTTTCGAGAATAGGCACCATAAACATAGTCTTCT
129 CAAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTC-
* * *
84136 TC-TCAAACGGATATAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACCAATTT
193 TCAT--AA-GGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTT
* * * * * * * * *
84200 TTATAAATTCAAAGTTCTTGCCTTAAATGAGATAGACAAGGATTTTAGTAACGATCTTCATTCAT
255 TTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCAT
* * * **
84265 TTCGTGATTAGGCACTGTAAACACATTCTCCTTATTAGGATACAA-GGTATTGGGGGTTTTCTTT
320 TTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA-AATGATATTGATGGTTTTCTTT
* * *
84329 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAATATCAAAGTTTGTACTTTAAAT-ACGACA
384 TGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA-GACA
* *
84393 TGCATTGATTCTTGTAAAAGTCTCCATTC
448 TGCATTGATTCTCGTAAAAGTCTCCAATC
84422 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * *
84487 TTGCAAGAGCAGCTTGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTGAATATGACA
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
*** ** * *
84552 AACATGAATACTCATACTAATTTACATTCTTTTCTTGATTAGGCACCGTCAAA-ATACTCTTCTC
131 AACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCAT-AAACATAGTCTTCTC
* * * * * *
84616 ATAAGGATACAGGAAATGGACGATTCGGCTTT-GCAAG-AACTACTTTTTTCCCACCAATTTTTG
195 ATAAGGATACAAGATATTGATGATTTGG-TTTCGCAAGAAAC-GCTTTTTTCCCACCAATTTTTG
* * * * * *
84679 TAAATTCTAAGTTTGTGCCTCGAATGATACAAACATAGATTCTAGTATGGATCTTCATACATTTC
258 TAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTC
* *
84744 ATGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTTTTCTTTTGCA
323 GTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCA
* * *
84809 TGGAAATCTTTTCTTTGCCTTATTTTCCTCAAAATCAAAGTTTGTACTTTAAATGAGAAATGCAT
388 TGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
* * *
84874 TGATTTTGGTAAAAGTCTCCATTC
453 TGATTCTCGTAAAAGTCTCCAATC
* * * *
84898 TTTTTAAGATTAGGAACCAAACACTCATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * *
84963 TCGCAAGAGAAGCTTGTCTTTCCACCATTATTGATAGAATCAAAATTTGACTCTTTAATAAGACA
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* * * *** * *
85028 AACATGAATACTCACAATAATCCACATTCTTTTTTGGATTAGGCACCATAAACATCGTTTTCTCA
131 AACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTCA
* * **
85093 TAAGGATA-AATGATATTGATGCTTTGGTTTCGCAAGAAACACTTCCTTCCCACCAATTTTTGTA
196 TAAGGATACAA-GATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTA
* * * * * * * * *
85157 AAGTATAAGTTCGTTCGTCAAATTAGACAAACGTGAATTCTAGTGAGGATCTTCATTCATTTCAT
260 AATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGT
* * * * *
85222 GGTTAGACACTATAAACGCATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTCTGCATT
325 GATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATG
* * * * * *
85287 AAAATCTTTTCTTTGCCTCA-TTTCCTT-AGATCAAAGCTTATGCTTTAAATGAGACATGCATTT
390 AAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
* * *
85350 ATTCTCATAAATGTCTCCATTC
455 ATTCTCGTAAAAGTCTCCAATC
* * * * * * *
85372 TTTCCATGATTGGGATCCTAAAGCACATTCCGTTCATTAGGATACATGACATTGATGCTTTGGTT
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * * *
85437 TCACAAGAGAAGCTTTTCTTTCCACCATTAATGATAAAATAAAAGTTTGTCACTTAAATAAGACA
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* * ***
85502 AACATGAATACTCATACTAATCCCCATTCTTTT-CAGGATTAAGAATTGTAAACATAGTCTTCTC
131 AACATGAATACTCATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAAACATAGTCTTCTC
* * *
85566 ATAAGGATA-AAGGATATTGATGATTTGGTTTCGCAAGAAACGTTTTTTTCCTAACAATTTTTGT
195 ATAAGGATACAA-GATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGT
* * * * *
85630 AAATTCCATGTTCGTGCCTCAAATGAAACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTTG
259 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
* * * *
85695 TGGTTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTTATGGTTTTCTTTGGCTT
324 TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCAT
* *
85760 GAAAATATTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACTTGCATT
389 GAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
85825 GATTCTCGTAAAAGTCTCCAATC
454 GATTCTCGTAAAAGTCTCCAATC
* * *
85848 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGATATTGATGCTTGGGGG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * *
85913 TCGCAAGAGAAGCTTTTCTTTCTACCGTTATGGATAGAATCAAATTTTGTCACTTAAATAAGACA
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
* *
85978 AACATGAATACTCATACAAATCCCCATTCTTTT-CAGGAATAGGCACCATAAACATAGTCTTCTC
131 AACATGAATACTCATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAAACATAGTCTTCTC
* * * * *
86042 ATAAGGCTTATATACATGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTTCCCACCAATTT
195 ATAAGG-----ATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTT
* *
86107 TTGTAAATTCTAAATGT-GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCCTTCA
255 TTGTAAATTCTAAGT-TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
86171 TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAACGATATTGATGGTTTTCTTT
319 TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
* * *
86236 TGCATGGAAATCTTTTCTTTGCCATAGTTTT-TTTAAAATCAAAGTTTGTACTTTAAATGAGACA
384 TGCATGAAAATCTTTTCTTTGCCTTA-TTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACA
*
86300 TGCATTGATTCTCGTAAAAGTCTCCACTC
448 TGCATTGATTCTCGTAAAAGTCTCCAATC
* * * * * * *
86329 -TTTCTAAGATTAGGATCCAAAAACACTTTCCCTTCATTAGGACACATGACACTGATGCTTTTGT
1 TTTTC-AAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * *
86393 GTCGTAAAAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTCTTAAATAAGAC
65 GTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * * * *
86458 AACCATGAATACTCATACCAATCCCCATTCTGTT-CAGGATTAGGCACCGTAAACACAGTCTTCT
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAAACATAGTCTTCT
* * * * ** * **
86522 CAAAAGGATACAGGACATTGATGATTTGGTTTCGCAAGTAACATTTTTTTCCCATCAATTTTCAT
194 CATAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGT
* * * *
86587 AAATTCTATGTTCATGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTAATTTCG
259 AAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCG
* * * * ***
86652 TGATTAGGCACTACAAGCACATTCTCCTCATTTGGATAAATGATATTTATGGCTTTT-TTTAAAA
324 TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGG-TTTTCTTTTGCA
* * * * *
86716 TGGAAATCGTTTCTTTGCCTTATTTTCCTTAAAATGAAAATTTGTACTTTAAATGAGACAAGCAT
388 TGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
*
86781 TGATTCTTGTAAAAGTCTCCAATC
453 TGATTCTCGTAAAAGTCTCCAATC
* * *
86805 TTTTCAAGACTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATCCTTTGGGG
1 TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * * *
86870 TGGCAAGAGAAGATTTTCTTTCTACCATTATGGATAGAATCAAAGTTTGTCAT-TTAAATAAGAT
66 TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTC-TCTTAAATAAGAC
*
86934 AAACATGAATACTCATACTAATTCCCATTCTTTT-CAGGATTAGGCACCATAAACATAGTCTTCT
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAAACATAGTCTTCT
* * * *
86998 CATAAGGACA-AATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCCCCAATTTTTG
194 CATAAGGATACAA-GATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTG
* * * * * *
87062 TAAAGTATAAGTTCATTCCTCAAATTAGAAAAACATGGATTCTAGTAAGGATCTTCATTCATTTC
258 TAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTC
* * * *
87127 GTGATTCGACACTATAAACAGATTCTCCT-ATTAAGGAAAAATGATATTGATGGTTTTCTTTTGC
323 GTGATTAGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGGTTTTCTTTTGC
*
87191 ATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACTTGCA
387 ATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
*
87256 TTGATTCTCGTAAAAGTCTCCACTC
452 TTGATTCTCGTAAAAGTCTCCAATC
* * * * * *
87281 -TTTCTAAGATTAGGATCCAAAAACACTTTCCCTTCATTAGGACACATGACATTGATGCTTTTGT
1 TTTTC-AAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * * * *
87345 GTCGTAAAAGAAGCTTTTCTTTCCATCGTTAATGATAAAATTAAAGTTTATCTCTTAAATAAGAC
65 GTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGAC
* * * * *
87410 AAACATTAATACTGATACTAATCACCATTATTTTCAAGATTAGGCACCATAAACATAGTCTTCTC
130 AAACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTC
*
87475 ATAAGGATACAGGATATTGATGATTTG
195 ATAAGGATACAAGATATTGATGATTTG
87502 TGTGAGCTCA
Statistics
Matches: 10444, Mismatches: 1414, Indels: 370
0.85 0.12 0.03
Matches are distributed among these distances:
452 6 0.00
453 373 0.04
456 2 0.00
457 5 0.00
458 2 0.00
460 1 0.00
461 539 0.05
462 149 0.01
463 117 0.01
464 131 0.01
465 249 0.02
466 7 0.00
467 15 0.00
468 1 0.00
469 5 0.00
470 254 0.02
471 733 0.07
472 511 0.05
473 510 0.05
474 588 0.06
475 442 0.04
476 4200 0.40
477 476 0.05
478 99 0.01
479 605 0.06
480 8 0.00
481 410 0.04
482 6 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (476 bp):
TTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTG
TCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
AACATGAATACTCATACTAATCCCCATTCTTTTCCAGATTAGGCACCATAAACATAGTCTTCTCA
TAAGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAA
ATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTG
ATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGA
AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGA
TTCTCGTAAAAGTCTCCAATC
Found at i:79074 original size:158 final size:157
Alignment explanation
Indices: 77965--87501 Score: 2019
Period size: 159 Copynumber: 60.4 Consensus size: 157
77955 TTCTTTTTCG
* * * * *
77965 GATTAGGCACCGTAAACATAGTCTTCTCATAAGGATA-AATGATATTGATGCTTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCAA
* * ** ** * * *
78029 GAAACGCTTTCTTGCCCCCAATTTTTGTAAA-GAATAAGTTCATTCCTAAAATTAGACAAACATG
65 GAAACGCTTT-TTTCCCTCAATTTTTGTAAATTCA-AAGTTTGTGCCTCAAATGAGACAAACATG
* * * * **
78093 AATTCT-AGCAAGGATCTTCATTCATTTCGT
128 GATTCTCA-TAAGAATCTCCATTCATTTCAA
* * ** * * * * * * *
78123 GGTTAGACACTGTAAACGCATTCTCCTCATTGGGATA-AATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCAA
* ** * * * * ** *
78187 TAAAATCTTTTCTTTGCCTC-ATTTCCT-TAGA-TAAAAGTTTGTG-CTCTAAATGAGACATGCT
65 GAAACGC-TTT-TTTCCCTCAATTT-TTGTAAATTCAAAGTTTGTGCCTC-AAATGAGACAAACA
*
78248 TTGATTCTCATAA-AAGTCTCCATTC-TTTCCAA
126 TGGATTCTCATAAGAA-TCTCCATTCATTT-CAA
* * * * * * * * *
78280 GACT-GGGATCTCA-AAGCACATTC-CCTTCATTAGGATACATGACACTGATGCTTTGCTCTCAC
1 GATTAGGCA-C-CATAAACACATTCTTC-TCATTAGGATACAAGATATTGATGCTTTGCTTTCGC
* * ** * * *
78342 AAGAAAAGCTTTTCTTCCCATC-GTTAATGAGAAAATCAAAGTTTGT-CACTTAAAT-A-AC--A
63 AAGAAACGCTTTT-TTCCC-TCAATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAA
* * ** *
78401 CATGAATACTCATACTAATC-CTCATTCTTTTCAA
124 CATGGATTCTCATAAGAATCTC-CATTCATTTCAA
* * * * * * * *
78435 GATTAGGCACCGTAAACATAGTCTTCTCATAAGGATACAGGATATTAATGATTTGATTTCGCAAG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
* * * * *
78500 AAACGTTTTTTTCCCATCAATTTTTTTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATGGA
66 AAACGCTTTTTTCCC-TCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGA
* * * **
78565 TTCTAATAAGGATCTTCATTCATTTCGT
130 TTCTCATAAGAATCTCCATTCATTTCAA
* * * * * * * *
78593 TATTAGGCACTATAAGCACATTCTCCTCATTAGGATA-AATGATATTTATGGTTTTCTTTTG-AA
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCAA
* * * * * * * * *
78656 TGAAA---ATCTATACCT-TATTTTCCT-TAAAATCAAAGTTTGT-ACT----TTA-A-AATGCA
65 -GAAACGCTTTTTTCCCTCAATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAA-ACA
* ** * **
78709 TTGATTCTCGCAA-AAGTCTCC-TATCTTTTCGT
126 TGGATTCTCATAAGAA-TCTCCAT-TCATTTCAA
* * * * * *** *
78741 GATTGGGAACCAAAAACACATTCCTT-TCATTAGGATACATGACATTGATGCTTTGGGGTCGCGA
1 GATTAGGCACCATAAACACATT-CTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAA
* * ** * * * *
78805 GAGAA-GCTTTTCTCTCTACCGTTATTGATAGAA-TCAAAG-TT-TGCCTTTTATATAAGACAAA
65 GA-AACGCTTTTTTCCCT-CAATTTTTG-TA-AATTCAAAGTTTGTGCC--TCAAATGAGACAAA
* * ** * *
78866 CATGAATACTCATACTAATC-CCTATTCTTTTCCA
124 CATGGATTCTCATAAGAATCTCC-ATTCATTTCAA
* * * * *
78900 GGTTAGGCACCATAAACATAGTCTTCTCATGAGGATACAAGATATTGATGCTTTGCTTTCGCAAT
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
* *
78965 AAACGCTTTTTTCCCATCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
66 AAACGCTTTTTTCCC-TCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGA
* ** **
79030 TTCT-AGTAAGGATCTTTATTCATTTCGT
130 TTCTCA-TAAGAATCTCCATTCATTTCAA
*** * * * * *
79058 GATTAGGCATTGTAAACACATTCTCCTCATTAGGATA-AATGATATTTATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCA-
* * * * * * * * * *
79122 AGAAATC-TTTTCTTTGCCT-TATTTTTCTTAAAATCAAAGTTTGTTCTTTAAAAGAGACAAGCA
64 AGAAA-CGCTTT-TTTCCCTCAATTTTT-GTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACA
* * *
79185 TTGATTCTCATAA-AAGTCTCCAATCTTTTCAA
126 TGGATTCTCATAAGAA-TCTCCATTCATTTCAA
* * * * * * * *
79217 GATTGGGAACCAAAAACACATTCCTT-TCATTAGGATACATGACATTGGTGCTTTGGTGTCGCAA
1 GATTAGGCACCATAAACACATT-CTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAA
* * ** * * * *
79281 GAGAA-GCTTTTCTCTCTACCGTTATTGATAGAA-TCAAAG-TT-TGCCTTTTATATAAGACAAA
65 GA-AACGCTTTTTTCCCT-CAATTTTTG-TA-AATTCAAAGTTTGTGCC--TCAAATGAGACAAA
* * ** * *
79342 CATGAATACTCATACTAATC-CCTATTCTTTTCCA
124 CATGGATTCTCATAAGAATCTCC-ATTCATTTCAA
* * * * *
79376 GGTTAGGCACCATAAACATAGTCTTCTCATAAGGATACAAGATATTGATGCTTTGCTTTCACAAG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
* * * *
79441 AAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTTGTGCCTCAAATGAGACAAACATGGA
66 AAACGCTTTTTTCCC-TCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGA
* * *
79506 TTCT-AGTAAGGATCTTCATTCATTTCAT
130 TTCTCA-TAAGAATCTCCATTCATTTCAA
* * * * * * *
79534 GATTAGGCACTATAAACACATTCTCCTTATTAGGATA-AATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCAA
** * * * * * * **
79598 GAAAATCTTTTCTTTGCCT-TATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
65 GAAACGC-TTT-TTTCCCTCAATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACA
* *
79661 CT-GATTCTCATAA-AAGTCTCCATTCTTTTTAA
126 -TGGATTCTCATAAGAA-TCTCCATTCATTTCAA
* * * * * * *
79693 G--TATGGGACCAAAAACATATTC-CCTTCATTAGAATACATGACATTGATGCTTTTG-TGTT-G
1 GATTA-GGCACCATAAACACATTCTTC-TCATTAGGATACAAGATATTGATGC-TTTGCT-TTCG
* ** ** * * * * *
79753 CAAGAGAA-GCTTTTCTT-TCTACCGTTAATGATAAAATCAAAATTTGTCCCT-TAA-G-G-GAA
62 CAAGA-AACGCTTTT-TTCCCT-CAATTTTTG-TAAATTCAAAGTTTGTGCCTCAAATGAGACAA
* * ** * * * * *
79812 ACATGAATACTCATACTAGTCCCCATTCTTTTTAG
123 ACATGGATTCTCATAAGAATCTCCATTCATTTCAA
* * * * * *
79847 GATTAGGCACCCTAAACATAGTCTTCTCA-TACGGATACAAGAGAATGATGATTTAG-TTTCGCA
1 GATTAGGCACCATAAACACATTCTTCTCATTA-GGATACAAGATATTGATGCTTT-GCTTTCGCA
* * *
79910 AGAAACACTTTTTTCCGAC-CAATTTTTGTAAATTCCAAGTTCGTGCCTCAAATGAGACAAACAT
64 AGAAACGCTTTTTTCC--CTCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACAT
* * **
79974 GGATTC-CAGTAAGGATCTTCATTCATTTCGT
127 GGATTCTCA-TAAGAATCTCCATTCATTTCAA
* * * * * * *
80005 GATTAGGCGCTATAAACACATTCTACTCATTAGGATA-AATGATATTTATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCA-
* * * * * ** * **
80069 GGAAATC-TTTTCTTTGCCT-TATTTTCCT-TAAAATCAAAGTTTGCACCTTAAATGAGACATGC
64 AGAAA-CGCTTT-TTTCCCTCAATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAAC
* * * *
80131 ATTGATTCTCATAA-AATTGTCCTTTCTTTTCAA
125 ATGGATTCTCATAAGAA-TCTCCATTCATTTCAA
* * * * * * * *
80164 GATTGGGAACCAAAAACACATTC-TCTTCATTAGGATACATGACATTAATGCTTTGGTGTCGCAA
1 GATTAGGCACCATAAACACATTCTTC-TCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAA
* * * * **
80228 GAGAA-GCTGCTCTTTCCAC-C-GTTATTTATAGAA-TCAAAGTTTGT-CTCTTAAACAAGACAA
65 GA-AACGCT--TTTTTCC-CTCAATT-TTTGTA-AATTCAAAGTTTGTGC-CTCAAATGAGACAA
* * ** ** * * *
80288 ACTTGAATAGTCATACCAATC-CATATTCTTTTCTA
123 ACATGGATTCTCATAAGAATCTC-CATTCATTTCAA
* ** * * * *
80323 TATTACACACCACCAGAA-ACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCG
1 GATTAGGCACCA-TA-AACACAT--TCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCG
* * * * * * ** * * *
80387 TAAGAAACGCTCTCTTCCCACCAATTTTTGTAAAGT-ATACGTTCATTCTTCAAATCAGACAAAC
62 CAAGAAACGCTTTTTTCCC-TCAATTTTTGTAAATTCA-AAGTTTGTGCCTCAAATGAGACAAAC
* * ** *
80451 ATGGATTCT-AGTAGGGATCTTTATTCATTTCAT
125 ATGGATTCTCA-TAAGAATCTCCATTCATTTCAA
* ** * * * * * ** **
80484 GATTAGGCACTATAAATGCATTCTCCCCGTTAGGATA-AATGATATTGATGGTTTTCTTTTACCT
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCAA
* * * * * * * * *
80548 GAAATC-TTTTATTTGCCTCACTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACAAGCAT
65 GAAA-CGCTTT-TTTCCCTCAATTT-TTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACAT
*
80611 CGATTCTCATAA-AAGTCTCCATTC-TTTCCAA
127 GGATTCTCATAAGAA-TCTCCATTCATTT-CAA
* * * * ** * * *
80642 GATTAGGAACC--AAACACATCCTCCTCACTAGGATACTTGACATTGATGCTTTGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
*** ** * * *
80705 AGAA-GCTTTTCTTTCCC-CTGCTAATGATAAGA-TCAAAGTTTGT-CTCTTAAATAACACAAAC
66 A-AACGC-TTT-TTTCCCTCAATTTTTG-TAA-ATTCAAAGTTTGTGC-CTCAAATGAGACAAAC
* ** ** * **
80766 ATGAATAGTCATACTAATAC-CCATTCTTTTCCG
125 ATGGATTCTCATAAGAAT-CTCCATTCATTTCAA
* * ** * *
80799 GATTTGGCACCATAAACATAGACTTCTCATAAGGATACATGATATTGATGCTTTGCTTTCGCAAG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
** * * * * * *
80864 AAAAACTTTCTTCCCACCAAATTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGGCAAACATGGA
66 AAACGCTTTTTTCCC-TCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGA
* * * * **
80929 TTCT-AGTATGGATCTTCGTTCATTTCGT
130 TTCTCA-TAAGAATCTCCATTCATTTCAA
* * * * * * * *
80957 GATTAGGCACTATAAACACTTTCTCCTTATTAGGATA-AATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCAA
** * * * * * * **
81021 GAAAATCTTTTCTTTGCCT-TATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
65 GAAACGC-TTT-TTTCCCTCAATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACA
*
81084 TTGATTCTCATAA-AAGTCTCCATTC-TTTCCAA
126 TGGATTCTCATAAGAA-TCTCCATTCATTT-CAA
* * * * * *
81116 GATT-GAGAACCAAAAACACATTC-CCTTCATTAGAATACATGAAATTGATGCTTTTG-TGTT-G
1 GATTAG-GCACCATAAACACATTCTTC-TCATTAGGATACAAGATATTGATGC-TTTGCT-TTCG
* ** ** * * * *
81177 CAAGAGAA-GCTTTTCTT-TCTACCGTTAATGATAAAATCAAAATTTGTCCCT-TAA-GAG--AA
62 CAAGA-AACGCTTTT-TTCCCT-CAATTTTTG-TAAATTCAAAGTTTGTGCCTCAAATGAGACAA
* * ** ** * * * *
81236 ACACGAAAACTCATACTAATCCCCATTCTTTTTAG
123 ACATGGATTCTCATAAGAATCTCCATTCATTTCAA
* * * * * * * *
81271 GATTAGGCACCCTAAACATAGTCTTCTCA-TATGGATGCAAGAGAATGTTGATTTAG-TTTCGCA
1 GATTAGGCACCATAAACACATTCTTCTCATTA-GGATACAAGATATTGATGCTTT-GCTTTCGCA
* * * *
81334 AGAAACGTTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATG
64 AGAAACGCTTTTTTCCC-TCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATG
* * **
81399 GATTCT-AGTAAGGATCTTCATTCATTTCGC
128 GATTCTCA-TAAGAATCTCCATTCATTTCAA
* * * * * * *
81429 GATTATGCACTATAAACACATTC-TCTTCATTAGGATA-AATGATAATAATGGTTTTCTTTTGCA
1 GATTAGGCACCATAAACACATTCTTC-TCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCA
* * * * * ** * **
81492 TGGAAATC-TTTTCTTTGCCT-TATTTTCCT-TAAAATCAAAGTTTGCACCTTAAATGAGACATG
64 -AGAAA-CGCTTT-TTTCCCTCAATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAA
* * * *
81554 CATTGATTCTCATAA-AATTGTCCTTTCTTTTCAA
124 CATGGATTCTCATAAGAA-TCTCCATTCATTTCAA
* * * * * * * *
81588 GATTGGGAACCAAAAACACATTC-TCTTCATTAGGATACATGACATTAATGCTTTGGTGTCGCAA
1 GATTAGGCACCATAAACACATTCTTC-TCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAA
* * * * *
81652 GAGAA-GCTGTTCTTTCCACT--GTTATTTATAGAA-TCAAAGTTT-TTCTCTTAAATAAGACAA
65 GA-AACGCT-TT-TTTCC-CTCAATT-TTTGTA-AATTCAAAGTTTGTGC-CTCAAATGAGACAA
* * ** ** * * *
81712 ACTTGAATAGTCATACCAATC-CATATTCTTTTCTA
123 ACATGGATTCTCATAAGAATCTC-CATTCATTTCAA
* ** * * * * * * *
81747 TATTACACACCAGAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGTAAG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
* * * * * ** * * *
81812 AAACGCTCTCTTCCCACCAATTTTTGTAAAGT-ATACGTTCATTCTTCAAATCAGACAAACATGG
66 AAACGCTTTTTTCCC-TCAATTTTTGTAAATTCA-AAGTTTGTGCCTCAAATGAGACAAACATGG
* * ** *
81876 ATTCT-AGTAGGGATCTTTATTCATTTCAT
129 ATTCTCA-TAAGAATCTCCATTCATTTCAA
* * * * * * *
81905 GATTAGGCACTATAAACGCATTCTCCCCGTTAGGATA-AATGATATTGATGGTTTTCTTTTAC-C
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGC-TTT-CGC
* * * * * * * * * * * * *
81968 TACAATC-TTTTATTTGCCTCACTTTCCT-TAAAATCATAGTTTGTACTTTAAATGAGACAAGCA
63 AAGAAACGCTTT-TTTCCCTCAATTT-TTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACA
* *
82031 TCGATTCTCGTAA-AAGTCTCCATTC-TTTCCAA
126 TGGATTCTCATAAGAA-TCTCCATTCATTT-CAA
* * * * *
82063 GATTAGGAACC--AAACACATTC-TCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
1 GATTAGGCACCATAAACACATTCTTC-TCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAA
* * * ** * * *
82125 GAGAA-GCTTTTCTTTCCACTATTAATGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACA
65 GA-AACGCTTTT-TTCCCTCAATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACA
* * ** * *
82188 TGAATACTCATACTAATAC-CCATTCTTTTCAG
126 TGGATTCTCATAAGAAT-CTCCATTCATTTCAA
* * * * ** * * * *
82220 GATTAGGCACCATAAAAATAGTCTTCTCATAAGGATACTGGATATTAATGATTTGGTTTTGCAAG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
* * * * * * **
82285 AAACGGTTTTTTCTCAC-CAATTTTTGCAAATTCTAAGTTCGTGCCTCAAATAAAACAAACATAA
66 AAACGCTTTTTTC-C-CTCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGG
* * ** **
82349 ATTCT-AGTGAGGATCTTTATTCATTTCGT
129 ATTCTCA-TAAGAATCTCCATTCATTTCAA
* * * * * * * * **
82378 GACTAGGCACTATAAATACATTCTCCTCATTAGGATACATGATATTGATGATTTTCTTTTGCGTG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
** * * * * * * * ** *
82443 AAAATCTTTTCTTTGCCT-TATTTTTCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
66 AAACGC-TTT-TTTCCCTCAATTTTT-GTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATG
* * * *
82507 AATTC-CTGTAA-AAGTCTCCATTCTTTTTAA
128 GATTCTC-ATAAGAA-TCTCCATTCATTTCAA
* * * * * *
82537 GATTGGGAACCAAAAACACATTCCTT-TCATTAGGATACAAGACATTGATGCTTTGGTGTCGCAA
1 GATTAGGCACCATAAACACATT-CTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAA
* * * * * * * *
82601 GAGAA-GCTTGTCTTTCCATC-GTTATTGATAGAA-TCAAAGTTTAT-CTCTTAAATAAAATAAA
65 GA-AACGCTT-T-TTTCCCTCAATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAA
* * ** * * **
82662 CATGAATACTCATACTAATC-CACAATCTTTTGTA
124 CATGGATTCTCATAAGAATCTC-CATTCATTTCAA
* * * * * *
82696 GATTAGGCACCATAAAAATAGTCTTCTCATAAGGATACAAGATATTGATGATTTGGTTTCGCAAG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
* * * *
82761 AAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAGACATGGA
66 AAACGCTTTTTTCCC-TCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGA
* * **
82826 TTCTAGCA-ACG-ATCTTCATTCATTTCGT
130 TTCT--CATAAGAATCTCCATTCATTTCAA
* * * * * * * *
82854 GATTAGGCACTATAAACACATTCTCCTTATTAGGATACATGATATTGATGGTTTTCTTTTGCATG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCA-A
* * * * * * * * **
82919 GAAATC-TTTTCTTTGCCT-TATTTTCTTTAAAATCAAAGTTTGTACATTAAATGAGACATGCAT
65 GAAA-CGCTTT-TTTCCCTCAATTTT-TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACAT
* * *
82982 TGATTCTCGTAA-AAGTCTCCACT-ATTTCCAA
127 GGATTCTCATAAGAA-TCTCCATTCATTT-CAA
* * * * * * *
83013 GATTAGG-ATCCAAAAACACTTTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
1 GATTAGGCA-CCATAAACACATTCTTC-TCATTAGGATACAAGATATTGATGCTTTGCTTTCGCA
* * * * * * * *
83076 AGAGAA-GCTTGTCTTTCCATC-GTTATTGATAGAA-TCAAAGTTTAT-CTCTTAAATAAAATAA
64 AGA-AACGCTT-T-TTTCCCTCAATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAA
* * ** * * **
83137 ACATGAATACTCATACTAATC-CATATTCTTTTGTA
123 ACATGGATTCTCATAAGAATCTC-CATTCATTTCAA
* * * * * * *
83172 GATTAGGCACCATAAAAATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAAG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
* * * *
83237 AAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAGACATGGA
66 AAACGCTTTTTTCCC-TCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGA
* * * **
83302 TTCT-AGCAAGGATCAT-CATTTATTTCGT
130 TTCTCA-TAAGAATC-TCCATTCATTTCAA
* * * * * * * * * *
83330 GATTAGGCACTATAAACACATTCTCCTTATTAGGACACATGATATTGACGGTTTTCTTTTGCATG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCA-A
* * * * * * * **
83395 GAAATC-TTTTCTTTGCCT-TATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
65 GAAA-CGCTTT-TTTCCCTCAATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACA
* *
83457 CT-GATTCTCGTAA-AAGTCTCCATT-TTTTCCAA
126 -TGGATTCTCATAAGAA-TCTCCATTCATTT-CAA
* * * * * * * * * *
83489 GATTGGGAACCAAAAACACATTACCT-TCATAAGGATACATGACATTGATGCTTTGGTGTCGCAG
1 GATTAGGCACCATAAACACATT-CTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAA
* * * * *
83553 GAGAA-GCTTTTCTTTCC-AACATTATTGATAAAATCAAAG-TT-TGCCTC---T-----TAA-A
65 GA-AACGCTTTT-TTCCCTCA-ATTTTTG-TAAATTCAAAGTTTGTGCCTCAAATGAGACAAACA
** * *
83605 T--A--CTCATACTAATC-CATATTCCTTTCAA
126 TGGATTCTCATAAGAATCTC-CATTCATTTCAA
* * * * * *
83633 GATTAGGCACCATAAACACAGTCTTCTCA-TACGGATATAGGATATTGATGATTTGGTTTAGCAA
1 GATTAGGCACCATAAACACATTCTTCTCATTA-GGATACAAGATATTGATGCTTTGCTTTCGCAA
** * * * * * * *
83697 GAAATACTTTTTTCCCACCAATGTTTATAAATTCTAAGTTCT-TGCCTTAAATGAGATAGACATG
65 GAAACGCTTTTTTCCC-TCAATTTTTGTAAATTCAAAGTT-TGTGCCTCAAATGAGACAAACATG
* * **
83761 CATTCT-AGTAATG-ATCTTCATTCATTTCGT
128 GATTCTCA-TAA-GAATCTCCATTCATTTCAA
* * * * * * *
83791 GATTAGGCACTC-TAAACACATTCTCCTCATTAGGATACAAGGTATTGAGGGTTTTCTTTTGCTT
1 GATTAGGCAC-CATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGC-A
* * * * * * * * **
83855 GGAAATC-TTTTCTTTGCCT-TATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATGC
64 AGAAA-CGCTTT-TTTCCCTCAATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAAC
*
83917 ATTGG-TTCTCGTAA-AAGTCTCCATTC-TTTCCAA
125 A-TGGATTCTCATAAGAA-TCTCCATTCATTT-CAA
* * * * * * *
83950 GATTGGGAACCA-AAAGCACATTACCT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
1 GATTAGGCACCATAAA-CACATT-CTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCA
* * * * *
84013 AGAGAA-GCTTTTCTTTCC-AACATTATTGATAAAATCAAAG-TT-TGCCTCTTAAAT-AAAGCA
64 AGA-AACGCTTTT-TTCCCTCA-ATTTTTG-TAAATTCAAAGTTTGTGCCTC--AAATGAGA-CA
** * * ** * *
84073 AGTATGAATACTCATACTAATC-CACATTCCTTTCGA
122 AACATGGATTCTCATAAGAATCTC-CATTCATTTCAA
* * * * * * *
84109 GAATAGGCACCATAAACATAGTCTTCTTCTCA-AACGGATATAGGATATTGATGATTTGGTTTCG
1 GATTAGGCACCATAAACACA---TTCTTCTCATTA-GGATACAAGATATTGATGCTTTGCTTTCG
* * * * * *
84173 CAAGAAATGCTTTTTTCCCACCAATTTTTATAAATTCAAAGTTCT-TGCCTTAAATGAGATAGAC
62 CAAGAAACGCTTTTTTCCC-TCAATTTTTGTAAATTCAAAGTT-TGTGCCTCAAATGAGACAAAC
* * * **
84237 AAGGATT-TTAGTAACG-ATCTTCATTCATTTCGT
125 ATGGATTCTCA-TAA-GAATCTCCATTCATTTCAA
** * * * ** * * * *
84270 GATTAGGCACTGTAAACACATTCTCCTTATTAGGATACAAGGTATTGGGGGTTTTCTTTTGCATG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCA-A
* * * ** * * * **
84335 GAAATC-TTTTCTTTGCCT-TA-TTTTCCATAATATCAAAGTTTGTACTTTAAAT-ACGACATGC
65 GAAA-CGCTTT-TTTCCCTCAATTTTTGTA-AAT-TCAAAGTTTGTGCCTCAAATGA-GACAAAC
* ** *
84396 ATTGATTCTTGTAA-AAGTCTCCATTCTTTTCAA
125 ATGGATTCTCATAAGAA-TCTCCATTCATTTCAA
* * * * * *
84429 GATTGGGAACCAAAAACACATTCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTT-GCA
1 GATTAGGCACCATAAACACATT-CTTCTCATTAGGATACAAGATATTGATGCTTTGCT-TTCGCA
* * * **
84492 AG-AGCAGCTTGTCTTTCCAC-C-GTTATTGATAGAA-TCAAAGTTTGT-CTCTTGAAT-ATGAC
64 AGAAAC-GCTT-T-TTTCC-CTCAATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGA-GAC
* * ** * * * **
84551 AAACATGAATACTCATACTAATTTACATTCTTTTCTT
121 AAACATGGATTCTCATAAGAATCTCCATTCATTTCAA
* * * * * * * * * *
84588 GATTAGGCACCGTCAAA-ATACTCTTCTCATAAGGATACAGGAAATGGACGATTCGGCTTT-GCA
1 GATTAGGCACCAT-AAACACATTCTTCTCATTAGGATACAAGATATTGATGCTT-TGCTTTCGCA
* * * * *
84651 AG-AACTACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTTGTGCCTCGAATGATACAAACAT
64 AGAAAC-GCTTTTTTCCC-TCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACAT
* * * * * *
84715 AGATTCT-AGTATGGATCTTCATACATTTCAT
127 GGATTCTCA-TAAGAATCTCCATTCATTTCAA
* * * * * * *
84746 GATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTTTTCTTTTGCATG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCA-A
* * * ** * * * * *
84811 GAAATC-TTTTCTTTGCCT-TATTTTCCTCAAAATCAAAGTTTGTACTTTAAATGAGA-AATGCA
65 GAAA-CGCTTT-TTTCCCTCAATTTTTGT-AAATTCAAAGTTTGTGCCTCAAATGAGACAA-ACA
* * ** * *
84873 TTGATTTTGGTAA-AAGTCTCCATTCTTTTTAA
126 TGGATTCTCATAAGAA-TCTCCATTCATTTCAA
* * * * * *
84905 GATTAGGAACCA-AACACTCATTCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
1 GATTAGGCACCATAA-ACACATT-CTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCA
* * * ** *
84968 AGAGAA-GCTTGTCTTTCCAC-C-ATTATTGATAGAA-TCAAAATTTG-ACTCTTTAATAAGACA
64 AGA-AACGCTT-T-TTTCC-CTCAATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACA
* * * * * ***
85028 AACATGAATACTCACAATAATC-CACATTCTTTTTTG
122 AACATGGATTCTCATAAGAATCTC-CATTCATTTCAA
* * *
85064 GATTAGGCACCATAAACATCGTT-TTCTCATAAGGATA-AATGATATTGATGCTTTGGTTTCGCA
1 GATTAGGCACCATAAACA-CATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCA
* ** * * * * * * *
85127 AGAAACACTTCCTTCCCACCAATTTTTGTAAAGT-ATAAGTTCGTTCGTCAAATTAGACAAACGT
64 AGAAACGCTTTTTTCCC-TCAATTTTTGTAAATTCA-AAGTTTGTGCCTCAAATGAGACAAACAT
* * * * *
85191 GAATTCT-AGTGAGGATCTTCATTCATTTCAT
127 GGATTCTCA-TAAGAATCTCCATTCATTTCAA
* * * * * * *
85222 GGTTAGACACTATAAACGCATTCTCCTCATTAGGATA-AATGATATTGATGGTTTTC-TTCTGCA
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTC-GCA
** ** * * * * * * * **
85285 TTAAAATCTTTTCTTTGCCTC-ATTTCCT-TAGA-TCAAAGCTTATGCTTTAAATGAGACATGCA
64 AGAAACGC-TTT-TTTCCCTCAATTT-TTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACA
** * *
85347 TTTATTCTCATAA-ATGTCTCCATTC-TTTCCAT
126 TGGATTCTCATAAGA-ATCTCCATTCATTT-CAA
* * * * * *
85379 GATT-GGGATCC-TAAAGCACATTCCGT-TCATTAGGATACATGACATTGATGCTTTGGTTTCAC
1 GATTAGGCA-CCATAAA-CACATT-CTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGC
* * * ** * * * *
85441 AAGAGAA-GCTTTTCTTTCCACCATTAATGATAAAATAAAAGTTTGT-CACTTAAATAAGACAAA
63 AAGA-AACGCTTTT-TTCCCTCAATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAA
* * ** * * *
85504 CATGAATACTCATACTAATCCCCATTCTTTTCAG
124 CATGGATTCTCATAAGAATCTCCATTCATTTCAA
* * *** * * * * *
85538 GATTAAGAATTGTAAACATAGTCTTCTCATAAGGATA-AAGGATATTGATGATTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCAA
* * * * * *
85602 GAAACG-TTTTTTTCCTAACAATTTTTGTAAATTCCATGTTCGTGCCTCAAATGAAACAAACAAG
65 GAAACGCTTTTTTCCCT--CAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATG
* * ***
85666 GATTCT-AGTAAGGATCTTCATTCATTTTGT
128 GATTCTCA-TAAGAATCTCCATTCATTTCAA
* * * * * * * **
85696 GGTTAGGCACTATAAACACATTCTCCTCATTAGGATA-AATGATATTTATGGTTTTCTTTGGCTT
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCAA
*** * * * * * * ***
85760 GAAAATATTTTCTTTGCCT-TATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACTTGCA
65 G-AAACGCTTT-TTTCCCTCAATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACA
* * * *
85823 TTGATTCTCGTAA-AAGTCTCCAATCTTTTCAA
126 TGGATTCTCATAAGAA-TCTCCATTCATTTCAA
* * * * * ***
85855 GATTGGGAACCAAAAACACATTCCTT-TCATTAGGATACATGATATTGATGCTTGGGGGTCGCAA
1 GATTAGGCACCATAAACACATT-CTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAA
* ** * * * * *
85919 GAGAA-GCTTTTCTT-TCTACCGTTATGGATAGAA-TCAAATTTTGT-CACTTAAATAAGACAAA
65 GA-AACGCTTTT-TTCCCT-CAATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAA
* * * * *
85980 CATGAATACTCATACA-AATCCCCATTCTTTTCAG
124 CATGGATTCTCATA-AGAATCTCCATTCATTTCAA
* * * * * * *
86014 GAATAGGCACCATAAACATAGTCTTCTCATAAGGCTTATATACATGATATTGATGCTTTGGTTTT
1 GATTAGGCACCATAAACACATTCTTCTCATTAGG-----ATACAAGATATTGATGCTTTGCTTTC
* * * *
86079 GCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAA-TGTGTGCCTCAAATGAGACAAA
61 GCAAGAAACGCTTTTTTCCC-TCAATTTTTGTAAATTC-AAAGTTTGTGCCTCAAATGAGACAAA
* **
86143 CATGGATTCT-AGTAAGGATCTTCC-TTCATTTCGT
124 CATGGATTCTCA-TAAGAATC-TCCATTCATTTCAA
* * * * *
86177 GATTAGGCACTATAAACACATTCTCCTCATTAGGATA-AACGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCA-
* * * * * * * * * **
86241 GGAAATC-TTTTCTTTGCCAT-AGTTTTTTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCA
64 AGAAA-CGCTTT-TTT-CCCTCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACA
* * *
86304 TTGATTCTCGTAA-AAGTCTCCACTC-TTTCTAA
126 TGGATTCTCATAAGAA-TCTCCATTCATTTC-AA
* * * * * * * * *
86336 GATTAGG-ATCCAAAAACACTTTC-CCTTCATTAGGACACATGACACTGATGCTTTTG-TGTCGT
1 GATTAGGCA-CCATAAACACATTCTTC-TCATTAGGATACAAGATATTGATGC-TTTGCTTTCGC
* * * ** ** * * * * *
86398 AA-AAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTAT-CTCTTAAATAAGACAAC
63 AAGAA-ACGCTTTT-TTCCCTCAATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAA
* * ** * *
86461 CATGAATACTCATACCAATCCCCATTC-TGTTCAG
124 CATGGATTCTCATAAGAATCTCCATTCAT-TTCAA
* * ** * * * *
86495 GATTAGGCACCGTAAACACAGTCTTCTCAAAAGGATACAGGACATTGATGATTTGGTTTCGCAAG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
* ** ** * * ** *
86560 TAACATTTTTTTCCCATCAATTTTCATAAATTCTATGTTCATGCCTCAAATGAGACAAACATAGA
66 AAACGCTTTTTTCCC-TCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGA
* * * **
86625 TTCT-AGTAAGGATCTTCATTAATTTCGT
130 TTCTCA-TAAGAATCTCCATTCATTTCAA
* * * * * * ***
86653 GATTAGGCACTACAAGCACATTCTCCTCATTTGGATA-AATGATATTTATGGCTTT--TTTTAAA
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGAT-GCTTTGCTTTCGCA
* * * * * * * *
86715 ATGGAAATCG-TTTCTTTGCCT-TATTTTCCT-TAAAATGAAAATTTGTACTTTAAATGAGACAA
64 A--GAAA-CGCTTT-TTTCCCTCAATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAA
* * ** * *
86777 GCATTGATTCTTGTAA-AAGTCTCCAATCTTTTCAA
123 ACATGGATTCTCATAAGAA-TCTCCATTCATTTCAA
* * * * * * * *** *
86812 GACTGGGAACCAAAAACACATTCCTT-TCATTAGGATACATGACATTGATCCTTTGGGGTGGCAA
1 GATTAGGCACCATAAACACATT-CTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAA
* * * * * * * * *
86876 GAGAA-GATTTTCTT-TCTACCATTATGGATAGAA-TCAAAGTTTGT-CATTTAAATAAGATAAA
65 GA-AACGCTTTT-TTCCCT-CAATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAA
* * ** * *
86937 CATGAATACTCATACTAAT-TCCCATTCTTTTCAG
124 CATGGATTCTCATAAGAATCT-CCATTCATTTCAA
* * * * *
86971 GATTAGGCACCATAAACATAGTCTTCTCATAAGGACA-AATGATATTGATGCTTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAA-GATATTGATGCTTTGCTTTCGCAA
* * * ** * * *
87035 GAAACGCTTTCTTCCCCCCAATTTTTGTAAAGT-ATAAGTTCATTCCTCAAATTAGAAAAACATG
65 GAAACGCTTT-TTTCCCTCAATTTTTGTAAATTCA-AAGTTTGTGCCTCAAATGAGACAAACATG
* * **
87099 GATTCT-AGTAAGGATCTTCATTCATTTCGT
128 GATTCTCA-TAAGAATCTCCATTCATTTCAA
* * * * * * * * *
87129 GATTCGACACTATAAACAGATTCTCCT-ATTAAGGA-AAAATGATATTGATGGTTTTCTTTTGCA
1 GATTAGGCACCATAAACACATTCTTCTCATT-AGGATACAA-GATATTGATGCTTTGCTTTCGCA
* ** * * * * * * ***
87192 TGAAAATCTTTTCTTTGCCT-TATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACTTGC
64 AGAAACGC-TTT-TTTCCCTCAATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAAC
* * *
87255 ATTGATTCTCGTAA-AAGTCTCCACTC-TTTCTAA
125 ATGGATTCTCATAAGAA-TCTCCATTCATTTC-AA
* * * * * * * *
87288 GATTAGG-ATCCAAAAACACTTTC-CCTTCATTAGGACACATGACATTGATGCTTTTG-TGTCGT
1 GATTAGGCA-CCATAAACACATTCTTC-TCATTAGGATACAAGATATTGATGC-TTTGCTTTCGC
* * * ** * * *
87350 AA-AAGAAGCTTTTCTTTCCATC-GTTAATGATAAAATT-AAAGTTTAT-CTCTTAAATAAGACA
63 AAGAA-ACGC-TTT-TTTCCCTCAATTTTTG-T-AAATTCAAAGTTTGTGC-CTCAAATGAGACA
** * * ** *
87411 AACATTAATACTGATACTAATCACCATT-ATTTTCAA
122 AACATGGATTCTCATAAGAATCTCCATTCA-TTTCAA
* * * * *
87447 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTG
1 GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTG
87502 TGTGAGCTCA
Statistics
Matches: 6662, Mismatches: 2054, Indels: 1326
0.66 0.20 0.13
Matches are distributed among these distances:
143 19 0.00
144 71 0.01
145 12 0.00
146 1 0.00
147 5 0.00
148 68 0.01
149 8 0.00
151 7 0.00
152 3 0.00
153 20 0.00
154 125 0.02
155 215 0.03
156 151 0.02
157 448 0.07
158 2020 0.30
159 2852 0.43
160 290 0.04
161 126 0.02
162 95 0.01
163 82 0.01
164 44 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (157 bp):
GATTAGGCACCATAAACACATTCTTCTCATTAGGATACAAGATATTGATGCTTTGCTTTCGCAAG
AAACGCTTTTTTCCCTCAATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGAT
TCTCATAAGAATCTCCATTCATTTCAA
Found at i:88311 original size:32 final size:32
Alignment explanation
Indices: 88270--88344 Score: 143
Period size: 32 Copynumber: 2.4 Consensus size: 32
88260 GTGAACAGTG
88270 TGAACAGTGATGAATAGTGATGTATCGATACA
1 TGAACAGTGATGAATAGTGATGTATCGATACA
88302 TGAACAGTGATGAATAGTGATGTATCGATACA
1 TGAACAGTGATGAATAGTGATGTATCGATACA
88334 TGAA-AGTGATG
1 TGAACAGTGATG
88345 TATCGATACA
Statistics
Matches: 43, Mismatches: 0, Indels: 1
0.98 0.00 0.02
Matches are distributed among these distances:
31 7 0.16
32 36 0.84
ACGTcount: A:0.37, C:0.08, G:0.27, T:0.28
Consensus pattern (32 bp):
TGAACAGTGATGAATAGTGATGTATCGATACA
Found at i:88342 original size:21 final size:22
Alignment explanation
Indices: 88311--88365 Score: 94
Period size: 21 Copynumber: 2.5 Consensus size: 22
88301 ATGAACAGTG
*
88311 ATGAATAGTGATGTATCGATAC
1 ATGAACAGTGATGTATCGATAC
88333 ATGAA-AGTGATGTATCGATAC
1 ATGAACAGTGATGTATCGATAC
88354 ATGAACAGTGAT
1 ATGAACAGTGAT
88366 AAATAGTGAT
Statistics
Matches: 32, Mismatches: 0, Indels: 2
0.94 0.00 0.06
Matches are distributed among these distances:
21 21 0.66
22 11 0.34
ACGTcount: A:0.38, C:0.09, G:0.24, T:0.29
Consensus pattern (22 bp):
ATGAACAGTGATGTATCGATAC
Found at i:88444 original size:18 final size:19
Alignment explanation
Indices: 88408--88444 Score: 67
Period size: 19 Copynumber: 2.0 Consensus size: 19
88398 CTACTACCAA
88408 TGTATCGATACATATTTTG
1 TGTATCGATACATATTTTG
88427 TGTATCGATACA-ATTTTG
1 TGTATCGATACATATTTTG
88445 GCTACTGCCA
Statistics
Matches: 18, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
18 6 0.33
19 12 0.67
ACGTcount: A:0.27, C:0.11, G:0.16, T:0.46
Consensus pattern (19 bp):
TGTATCGATACATATTTTG
Found at i:88472 original size:53 final size:53
Alignment explanation
Indices: 88408--88544 Score: 238
Period size: 53 Copynumber: 2.6 Consensus size: 53
88398 CTACTACCAA
*
88408 TGTATCGATACATATTTTGTGTATCGATACAATTTTGGCTACTGCCAATGACC
1 TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAATGACC
* *
88461 TGTATCGATACATATTGTGTGTATCGATACAAATTTGGCTACTGCCAATGTCC
1 TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAATGACC
88514 TGTATCGATACATATTTGTGTGTATCGATAC
1 TGTATCGATACATATTT-TGTGTATCGATAC
88545 TATGCAATCT
Statistics
Matches: 79, Mismatches: 4, Indels: 1
0.94 0.05 0.01
Matches are distributed among these distances:
53 66 0.84
54 13 0.16
ACGTcount: A:0.26, C:0.18, G:0.18, T:0.38
Consensus pattern (53 bp):
TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAATGACC
Found at i:88577 original size:20 final size:20
Alignment explanation
Indices: 88514--88584 Score: 74
Period size: 20 Copynumber: 3.5 Consensus size: 20
88504 GCCAATGTCC
**
88514 TGTATCGATACATATTTGTG
1 TGTATCGATACATATTAATG
* *
88534 TGTATCGATAC-TATGCAATC
1 TGTATCGATACATAT-TAATG
88554 TGTATCGATACAT-TTAAATG
1 TGTATCGATACATATT-AATG
88574 TGTATCGATAC
1 TGTATCGATAC
88585 TTTTCAGGGT
Statistics
Matches: 42, Mismatches: 6, Indels: 6
0.78 0.11 0.11
Matches are distributed among these distances:
19 3 0.07
20 38 0.90
21 1 0.02
ACGTcount: A:0.30, C:0.14, G:0.17, T:0.39
Consensus pattern (20 bp):
TGTATCGATACATATTAATG
Found at i:90080 original size:159 final size:156
Alignment explanation
Indices: 89890--96754 Score: 1845
Period size: 159 Copynumber: 43.3 Consensus size: 156
89880 TTCATTCCAT
* * * * **
89890 GATTAGGCACTATAAACACATTTTCCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGCATG
1 GATTAGGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCA-G
* * **
89955 GAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAAACATGCATTG
65 GAAATCTTTTCTTTCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATTG
* * *
90020 AATCTCGTAAAAGTCTCCAATCTTTTCAT
128 ATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * ** * * *
90049 GATTAGG-ATCCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCCTTGGTGTCGCAA
1 GATTAGGCA-CCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * * ** *
90113 GAGAAGCTTTGCTTTCCACCGTTA--ATGATAAAATCAAAGTTTGT-CTCTTAAATAAGATAAAC
65 GA-AATCTTTTCTTT-C-CC-TTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAAAC
* * * * * *
90175 A-TGAATACTCATACTAA-TCCCCATTCTTTTTAG
124 ATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAA
* * * * * *
90208 GATTAGGCACCATAAACATAGTCT-TCTCATAAGGATAAATGATATTGATGCTTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * ** * * ** * * * *
90272 GAAA-CGCTTTCTTCACCCCAATTTT-TGTAAAGT-ATATGTTCATTCCTCAAATTAGACAAACA
65 GAAATC-TTTTCTT-TCCCTTATTTTCT-TAAAATCA-AAGTTTGTACTTTAAA-TAAACAAACA
* * * * ** **
90334 TGGATTCTAGT-AAGGATCTTCATTCAATTCGT
125 TTGATTCTCGTAAAAG-TCTCCATTCTTTTCAA
* * * * ** *
90366 GATTTGGCACTATAAACAGATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTCTGCATG
1 GATTAGGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCA-G
* * * * **
90431 AAAATCTTTTCTTTGCCTTATTTTCCTTAAAATAAAAGTTTGTACTTTAAATGAGACATGCATTG
65 GAAATCTTTTCTTTCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATTG
* *
90496 ATTCTCGTAAAAGTCTCCACTCTTTCCAA
128 ATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * ** *
90525 GATTAGG-ATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGCTGCAA
1 GATTAGGCA-CCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * * **
90589 GAGAAGCTTTTTTTTCCACCGTTA--ATGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAAC
65 GA-AATCTTTTCTTT-C-CC-TTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAAAC
* * * *
90651 A-TGAATACTCATACTAATTC-CCATTCTTTT-AA
124 ATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAA
* * * * * * *
90683 GGATTAGGCATCATAAACATAGTCT-TCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCA
1 -GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTTGCA
* * * * * * * * * *
90747 AGAAATGCTTTT-TTCCCACTGATTTT-TGTAAATTCTATGTTCGTGCATCAAATAAGACAAACA
64 GGAAAT-CTTTTCTTTCC-CTTATTTTCT-TAAAATCAAAGTTTGTACTTTAAATAA-ACAAACA
* * * * * **
90810 TGGATTCTTGT-AAGGATCTGCATTCATTTCGT
125 TTGATTCTCGTAAAAG-TCTCCATTCTTTTCAA
* * * * * **
90842 GATTAGGCACTATAAACTCATTCTCCTT-AATAGAATAAATGATATTGATAGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCA-
* * * **
90906 GGAAATCTTTT-TTGTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGACATGCAT
64 GGAAATCTTTTCTT-TCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACAT
* *
90970 TGATTCTTGTAAAAGTGTCCATTCTTTTCAA
126 TGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * * *
91001 GATT-GAGAACCAAAAACACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
1 GATTAG-GCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCA
* * * * ** *
91064 AGAGAAGCTTTGCTTTCCACCGTTA--ATGATAAAATCAAAGTTTGT-CTCTTAAATAAGATAAA
64 GGA-AATCTTTTCTTT-C-CC-TTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAAA
* * * * * *
91126 CA-TGAATACTCATACTAA-TCCCCATTCTTTTTAG
123 CATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAA
* * * * * *
91160 GATTAGGCACCATAAACATAGTCT-TCTCATAAGGATAAATGATATTGATGCTTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * ** * * ** * * * *
91224 GAAA-CGCTTTCTTCACCCCAATTTT-TGTAAAGT-ATATGTTCATTCCTCAAATTAGACAAACA
65 GAAATC-TTTTCTT-TCCCTTATTTTCT-TAAAATCA-AAGTTTGTACTTTAAA-TAAACAAACA
* * * * ** **
91286 TGGATTCTAGT-AAGGATCTTCATTCAATTCGT
125 TTGATTCTCGTAAAAG-TCTCCATTCTTTTCAA
* * * * ** *
91318 GATTTGGCACTATAAACAGATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTCTGCATG
1 GATTAGGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCA-G
* * * * **
91383 AAAATCTTTTCTTTGCCC-TATTTTCCTTAAAATAAAAGTTTCTACTTTAAATGAGACATGCATT
65 GAAATCTTTTCTTT-CCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATT
* *
91447 GATTCTCGTAAAAGTCTCCACTCTTTCCAA
127 GATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * * *
91477 GATTAGG-ATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAA
1 GATTAGGCA-CCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * * ** **
91541 GAGAAGCTTTTTTTTCCAC-CATAATGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-
65 GA-AATCTTTTCTTTCC-CTTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAAACAT
* * * *
91603 TGAATACTCATACTAA-T-TCCAATTCTTTTCAG
126 TG-ATTCTCGTA-AAAGTCTCC-ATTCTTTTCAA
* * * * * * * * *
91635 GATTAGGCACCATAAACATAGTCT-TCTCATAAGGATTAAGGATATTGATGTTTTCGTTTAGCAA
1 GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * * * * ** * * * *
91699 GAAATGCTTTT-TTCCCACTAATTTT-TGTAAATTCTATGTTCATGCCTCAAATAAGACAAGCAT
65 GAAAT-CTTTTCTTTCC-CTTATTTTCT-TAAAATCAAAGTTTGTACTTTAAATAA-ACAAACAT
* * * * * * **
91762 GGATTCTAGT-AAGGATCTTCTTTCATTTCGG
126 TGATTCTCGTAAAAG-TCTCCATTCTTTTCAA
* * * * * ** *
91793 GATTAGGCATTC-TAAACACTTTCTCCTCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCCT
1 GATTAGGCA-CCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTG-CA
* * * * * * * * **
91857 GAAAATCTTTTCTTTGCCTCATTTTCCCTAAAATCAAAGTTTGCATTTTAATTGAGACATGCATT
64 GGAAATCTTTTCTTTCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATT
* *
91922 GATTCTTGTAAAGGTCTCCATTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * ** * * *
91952 GCTT-GAGAACCAAAAACACATTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAA
1 GATTAG-GCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGC-A
* * * ** * *
92016 GAAAAGCTTGTCTTTCCACCGTTA--TTGATAGAATCAAAGTTTGT-CTCTTAAATAAGGCAAAC
64 GGAAATCTTTTCTTT-C-CC-TTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAAAC
* ** ** **
92078 A-TGAATACTTATGCTAA-TC-CACATTCTTTTCTG
124 ATTG-ATTCTCGT-AAAAGTCTC-CATTCTTTTCAA
* * * * * *
92111 GATTAGGCACCATAAACATAGTCT-TCTCATAAGGATAAATGATATTGATGCTTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* ** ** * ** * * * * *
92175 GAAACGCTTTT-TCCCCCCAATTTT-TGTAAAGT-ATAAGTTCATTCCTCATATTAGACAAACAT
65 GAAA-TCTTTTCTTTCCCTTATTTTCT-TAAAATCA-AAGTTTGTACTTTA-AATAAACAAACAT
* * * * * **
92237 GGATTCTAGT-AAGGATCTTCATTCATTTCGT
126 TGATTCTCGTAAAAG-TCTCCATTCTTTTCAA
* * * * **
92268 GATTAGGCACTATAAACAGATTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCATG
1 GATTAGGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCA-G
* * * ** *
92333 AAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCCTTG
65 GAAATCTTTTCTTTCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATTG
* *
92398 ATTCTCGTAAAAGTCTCCACTCTTTCCAA
128 ATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * *
92427 GATTAGG-ATCCA-AAACCACTTTCCCTTCATTAGGATAAATGACATTGA-GGCTTTGGTGTTGC
1 GATTAGGCA-CCATAAA-CACATTCTCTTCATTAGGATAAATGATATTGATGG-TTTGGTTTTGC
* * * ** ** **
92489 AAGAAAAGCTTTTTTTTCCACCGATAATGATAAAAT-AAAGTTTGT-CTCTTAAATAAGACAAAC
63 -AGGAAATCTTTTCTTTCC-CTTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAAAC
* * * *
92552 A-TGAATACTCATACTAATTC-CCATTCTTTTCAA
124 ATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAA
* * * * * * *
92585 GATTAGGCACCATAAACATAGTCT-TGTCATTAGGATAAAGGTTATTGATGATTTGGTTTCGTAG
1 GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * * * * ** * * *
92649 GAAATGCTTTT-TTCCCCCTAATTTT-TGTAAATTCTATGTTCATGCCTCAAATGAGAA-AAACA
65 GAAAT-CTTTTCTT-TCCCTTATTTTCT-TAAAATCAAAGTTTGTACTTTAAAT-A-AACAAACA
* * * * * **
92711 TGGATTCTAGT-AAGGATCTGCATTCATTTCGT
125 TTGATTCTCGTAAAAG-TCTCCATTCTTTTCAA
* * ** **
92743 GATTAGGCACTATAAACACATTCTCCTT-AATAGGATAAATGATATTGATGGTTTTCTTTTGTGT
1 GATTAGGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTTG-CA
* * * **
92807 GGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGACATTCATT
64 GGAAATCTTTTCTTTCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATT
92872 GATTCTCGTAAAAGTCTCCATTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * * * * * *
92902 GATT-GAGAACCAAAAACAAATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAA
1 GATTAG-GCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * ** * * * * *
92966 GAGAAGCCTTTCTTTCCACCGTTA--TTAATAGAGTTAAAGTTCGT-CTCTTAAATAAGAGAAAC
65 GA-AATCTTTTCTTT-C-CC-TTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAAAC
* * * * ***
93028 A-TAATACTCATACTAA-TC-CACATTCTTTTTTG
124 ATTGATTCTCGTA-AAAGTCTC-CATTCTTTTCAA
** * * * * * * *
93060 GATTAGGCACCAT-AA-ACATAGTC-T-AATAGGGATACATGATAATGATGCTTTGGATTCGCAA
1 GATTAGGCACCATAAACACATTCTCTTCATTA-GGATAAATGATATTGATGGTTTGGTTTTGCAG
* ** *** ** * ** * * *
93121 GAAACGCTTCCCCCCCCCCCCCAATTTT-TGTAATAT-ATAAGTTCATTCCTTAAATAAGACAGA
65 GAAA-TCTT---TTCTTTCCCTTATTTTCT-TAAAATCA-AAGTTTGTACTTTAAATAA-ACAAA
* * * * * **
93184 CATTGATTCTAGT-AAGGATCTTCTTTCATTTCGG
123 CATTGATTCTCGTAAAAG-TCTCCATTCTTTTCAA
** * * * * ** *
93218 GATTAGGCATTATAAACACTTTCTCCTCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCCTG
1 GATTAGGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTG-CAG
* * ** * * * * * * *
93283 GAAATCTTTTCTTTGCCTCATTTTCCCCAAAGTCAAAGTTCGCATTTTAATTGAGACAAGCATTG
65 GAAATCTTTTCTTTCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATTG
* * *
93348 ATTCTCGTAAAGGTCTCCACTCTTTCCAA
128 ATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * * *
93377 GATTAGG-ATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAC
1 GATTAGGCA-CCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * * **
93441 GAGAAGCTTTTTTTTTCCACCGTTA--ATAATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAA
65 GA-AATC-TTTTCTTT-C-CC-TTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAAA
* * * * *
93503 CA-TGAATACTCATACTAA-TCCCCATTCTTTTCAG
123 CATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAA
* * * * * * * * * *
93537 GATTACGCTCCATAAACATAGTCT-TCTCATAAGGATACAGGATATTGATGATTTGGTTATGCAA
1 GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * * * * * *
93601 GAAATGC-TTT-TTTCCCATCAATTTCTATAAATTCTATGTTCGTGT-C-TCAAATGAGACAAAC
65 GAAAT-CTTTTCTTTCCC-TTATTTTCT-TAAAATCAAAGTT--TGTACTTTAAAT-AAACAAAC
* * * * **
93662 ATAGATTCTAGTAAGAA-TCTTCATTCATTTCGT
124 ATTGATTCTCGTAA-AAGTCTCCATTCTTTTCAA
* * * * * * ** *
93695 GATTAGGCACAATAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
** * * * **
93759 GAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAATTGAGACATGCATTG
65 GAAATCTTTTCTTTCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATTG
93824 ATTCTCGTAAAAGTCTCCATTCTTTTCAA
128 ATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * * *
93853 GATT-GAGAACCAAAAACAAATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTCTCT-C
1 GATTAG-GCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGT-TTTGC
* * * ** * * *
93915 AAGAGAAGCCTTTCTTTCCACCGTTA--TTAATAGAATCAAAGTTTGT-CTCTTAAATATGATAA
63 AGGA-AATCTTTTCTTT-C-CC-TTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATA-AACAA
** * * * ***
93977 ACATAAATACTCATACTAA-TC-CACATTCTTTTTTG
122 ACATTGATTCTCGTA-AAAGTCTC-CATTCTTTTCAA
* * * * * * *
94012 GATTAGGCACCATAAACATAGTCT-TCTC-TTAGGGATACATGATAATGATGCTTTGGATTCGCA
1 GATTAGGCACCATAAACACATTCTCT-TCATTA-GGATAAATGATATTGATGGTTTGGTTTTGCA
* * * ** ** * * * *
94075 AGAAACGCTTATTC--GCCCCAATTTT-TGTAATGT-ATAAGTTCAT-TTC-TCAAATGAGACAG
64 GGAAA-TCTT-TTCTTTCCCTTATTTTCT-TAAAATCA-AAGTT--TGTACTTTAAAT-AAACAA
* * * * *
94134 ACATGGATTCTAGT-AAGGATCTTCC-TTCATTTCGA
122 ACATTGATTCTCGTAAAAG-TC-TCCATTCTTTTCAA
** * * * * ** *
94169 GATTAGGCATTATAAACACTTTCTCCTCATTAGGATAAATGATATTAATTGTTTTCTTTTGCCTG
1 GATTAGGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTG-CAG
* * * * * * * **
94234 GAAATCTTTTCTTTGCCTCATTTCCTTAAAATCAAATTTTTTATTTTAATTAAGACATGCATTGA
65 GAAATCTTTTCTTTCCCTTATTTTCTTAAAATCAAAGTTTGTACTTTAAATAA-ACAAACATTGA
* *
94299 TTCTCGTAAAAGTCTCCAGTCTTTCCAA
129 TTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * * *
94327 GATTAGG-ATCCAAAAACAC-TTTTCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTA
1 GATTAGGCA-CCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCA
* * * * ** *
94390 AGAGAAGCTTTTTTTTCCACCGTTA--ATGATAAAATCAATGTTTGT-CTCTTAAATAAGACAAA
64 GGA-AATCTTTTCTTT-C-CC-TTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAAA
* * * * * *
94452 CATTAATACTCATACTAA-TCCCCATTCTTTTCAG
123 CATTGATTCTCGTA-AAAGTCTCCATTCTTTTCAA
* * * * * * *
94486 GATTGGGCACCATAAACATAGTC-CTCACATAAGGATACA-GTATATTGATGATTTGGTTTTGCA
1 GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATG-ATATTGATGGTTTGGTTTTGCA
* * * * * * ** * * * *
94549 AGAAATGC-TTT-TTTCCCATCAATTTCTGTAAATTCTATGTTCATGCCTCAAATGAGACAAACA
64 GGAAAT-CTTTTCTTTCCC-TTATTTTCT-TAAAATCAAAGTTTGTACTTTAAAT-AAACAAACA
* * * * * **
94612 TGGATTCTTGT-AAGGATCTTCATTCATTTCGT
125 TTGATTCTCGTAAAAG-TCTCCATTCTTTTCAA
* * * * * * * * **
94644 GATTAAGTACTATAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCA-
* * **
94708 GGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
64 GGAAATCTTTTCTTTCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATT
* * *
94773 GATTCTTGCAAAAGTCTCCATT-TGTTTTAA
127 GATTCTCGTAAAAGTCTCCATTCT-TTTCAA
* * * * * * ** * * *
94803 GATTGGGAACCAAAAACACTTTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGC-AG
* * * * *
94868 AAAAGCTTGTCTTTCCAC-TATTAT-TGAGAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACA
65 GAAATCTTTTCTTTCC-CTTATTTTCTTA-A-AATCAAAGTTTGTACT-TTAAATAA-ACAAACA
* ** ** **
94930 -TGAATACTTATGCTAA-TC-CACATTCTTTTCTG
125 TTG-ATTCTCGT-AAAAGTCTC-CATTCTTTTCAA
* * * * * * *
94962 GATTAGGCACCATAAAAATAGTCT-TCTCATAAGGATAAATGATATTGATGCTTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* ** * ** * * * *
95026 GAAA-CGCTTTCTTCTCCCCAATTTT-TGTAAAGT-ATAAGTTCATTCCTTATATTACACAAACA
65 GAAATC-TTTTCTT-TCCCTTATTTTCT-TAAAATCA-AAGTTTGTACTTTA-AATAAACAAACA
* * * * * **
95088 TGGATTCTAGT-AAGGATCTTCATTCATTTCGT
125 TTGATTCTCGTAAAAG-TCTCCATTCTTTTCAA
* * * * ** *
95120 GATTAGGCACTATAAACAGATTCCCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGGATG
1 GATTAGGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCA-G
* * * * **
95185 AAAATCTTTTCTTTGCCTTATTTTCCTTAAAATAAAAGTTTGTACTTTAAATGAGACATGCATTG
65 GAAATCTTTTCTTTCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATTG
* *
95250 ATTCTCGTAAAAGTCTCCACTCTTTCCAA
128 ATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * *
95279 GATTAGG-ATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGA-GGCTTTGGTGTTGTA
1 GATTAGGCA-CCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGG-TTTGGTTTTG-C
* * * * * ** **
95342 AGAAAAGCTTTTTTTTCCATCGATAATGATAAAAT-AAAGTTTGT-CTCTTAAATAAGACAAACA
63 AGGAAATCTTTTCTTTCCCT-TATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAAACA
* * * * *
95405 -TGAATACTCATACTAA-TTTCCATTCTTTTCAG
125 TTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAA
* * * * * * *
95437 GATTAGGCACCATAAACATAGTCT-TGTCATTAGGATAAAGGTTATTGATGATTTGGTTTCGGAG
1 GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * * * * ** * * *
95501 GAAATGCTTTT-TTCCCCCTAATTTT-TGTAAATTCTATGTTCATGCCTCAAATAAGACAAACAT
65 GAAAT-CTTTTCTT-TCCCTTATTTTCT-TAAAATCAAAGTTTGTACTTTAAATAA-ACAAACAT
* * * * * **
95564 AGATTCTAGT-AAGGATCTGCATTCATTTCGT
126 TGATTCTCGTAAAAG-TCTCCATTCTTTTCAA
* * * ** *
95595 GATTAGGCACTATAAACATATTCTCCTT-AATAGGATAAATGATATTGATGGTTTTCTTTTGCGT
1 GATTAGGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGC-A
* * * * **
95659 GGAAATCTTTTCTTTGCCTTATTTTCCTTTAAATCAAAGTTTGTATTTTAAATGAGACATGCATT
64 GGAAATCTTTTCTTTCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATT
95724 GATTCTCGTAAAAGTCTCCATTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * * * * *
95754 GCTT-GAGAACCAAAAACACATTC-CTTTCATTGGGATACATGACATTGATGCTTTGGTGTCATA
1 GATTAG-GCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGT-T-TTG
* * * * ** * * *
95817 AAAG-AAGCTTGTCTTTCCACCGTTA--TTGATAGAATCAAAATTTGT-CTCTTAATTAAGACAA
62 CAGGAAATCTTTTCTTT-C-CC-TTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAA
* * * **
95878 ACA-TGAATACTCATACCAA-TC-CACATTCTTTTCTG
122 ACATTG-ATTCTCGTA-AAAGTCTC-CATTCTTTTCAA
* * * * * * * * * * * *
95913 GATTAGGCACCGTAAAAATAGTCT-TCTCATAAAGATACAGGATATTGCTGATTTGGCTTTGCAA
1 GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
** * * * * * * * *
95977 GAAA-CTCTTT-TTTCCCAACAATTTT-TGTAAATTCTAAGTTCGTGCCTCAAATGAGACAGACA
65 GAAATCT-TTTCTTTCCC--TTATTTTCT-TAAAATCAAAGTTTGTACTTTAAAT-AAACAAACA
* * * * * * * *
96039 TGGATGCTAG-GAAGGATCTTCATTCATTTCGTA
125 TTGATTCTCGTAAAAG-TCTCCATTCTTTTC-AA
* * * * * * ** *
96072 -ATTGGGCACTATAAACTCATTCTCCTCATTCGGATACATGATATTGATGGTTTTCTTTTGCCTG
1 GATTAGGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTG-CAG
* * * **
96136 GAAATCTTTTCTTTGCATTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
65 GAAATCTTTTCTTTCCCTTATTTT-CTTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATTG
*
96201 ATTCTCGTAAAAGTCTCCATTCTTTCCAA
128 ATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * * * * * * *
96230 GATTGGGAACTAAAAACACATTAC-CTTCATTAGGATACATGACATTGATGCTTTGGTATCGTAA
1 GATTAGGCACCATAAACACATT-CTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * * ** * * *
96294 AAGAAGCTTTTCTTTCCACCGTTA--ATGATAAAATCAAAGTTTAT-CTCCTAAATAAGACTAAC
65 GA-AATCTTTTCTTT-C-CC-TTATTTTCTTAAAATCAAAGTTTGTACT-TTAAATAA-ACAAAC
* * * *
96356 A-TGAATACTCATACTAA-TCCCCATTCTTTTCAA
124 ATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTCAA
* * * * * * * * *
96389 GATTAGGCACCGTAAACATAGTCT-TCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAG
* * * * * * * * *
96453 GAAA-CGATTT-TTTCCCGTCAATTTT-TGTAAATTCTATGTTCGTGGC-TCAAATGAGACAAAC
65 GAAATC-TTTTCTTTCCC-T-TATTTTCT-TAAAATCAAAGTTTGT-ACTTTAAAT-AAACAAAC
* * * * * **
96514 ATGGATTCTAC-T-AAGGATATTCATTCATTTCGT
124 ATTGATTCT-CGTAAAAG-TCTCCATTCTTTTCAA
* * * * * **
96547 GATTAGACACTATAAACATATTCTCCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGCATG
1 GATTAGGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCA-G
* * * **
96612 AAAATCTTTTCTTTGCCTTATTTTCATTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
65 GAAATCTTTTCTTTCCCTTATTTTC-TTAAAATCAAAGTTTGTACTTTAAAT-AAACAAACATTG
* *
96677 AGTCTCGTAAAAGTCTCCAATCTTTTCAA
128 ATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * *
96706 GATTGGGAACCAAAAACACATT-TCTTTCATTAGGATACATGACATTGAT
1 GATTAGGCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGAT
96755 ACTTTGGGGT
Statistics
Matches: 4740, Mismatches: 1518, Indels: 896
0.66 0.21 0.13
Matches are distributed among these distances:
154 5 0.00
155 53 0.01
156 43 0.01
157 322 0.07
158 1734 0.37
159 2250 0.47
160 255 0.05
161 44 0.01
162 32 0.01
163 2 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (156 bp):
GATTAGGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTTGCAGG
AAATCTTTTCTTTCCCTTATTTTCTTAAAATCAAAGTTTGTACTTTAAATAAACAAACATTGATT
CTCGTAAAAGTCTCCATTCTTTTCAA
Found at i:90419 original size:476 final size:475
Alignment explanation
Indices: 89514--97086 Score: 10247
Period size: 476 Copynumber: 15.9 Consensus size: 475
89504 TCTTTTGCAT
* * *
89514 AAGTTTGTAATTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTTT-AAAATT-G
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * * * *
89577 GAAACCAAAAGACACATTTCCTTCATTAGGATACATGGCAATGTTGCTTTGGTGTTGCAAGAGAA
66 G-AACCAAAA-ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA
* * ** * *
89642 GCTTGTCTTTCCACCGTTACTGATGGAATCAAAGTTTGTCTCTTAAATAAGGCAAATATGAATAC
129 GCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAC
* * *
89707 TCATGCTAATCCACATTCTTTTCT-GGATTAGGCAACATAAACATAGTCTTCTCATAAGGATAAA
194 TCATACTAATCCCCATTCTTTT-TAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAA
* * * * * * * *
89771 TGATATTGATTCTTTGGTTTCGTAAGAAACGCTTTCTTCTCACCAATTTTTGTAAAGTATAAGCT
258 TGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTC-CCCCAATTTTTGTAAATTCTATGTT
* * * *
89836 CGTGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTCCATGATTAGGCACT
322 CATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT
* *
89901 ATAAACACATTTTCCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAAATCTTTTC
387 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
89966 TTTGCCTTATTTTCCTTAAAATCA
452 TTTGCCTTATTTTCCTTAAAATCA
* * * * *
89990 AAGTTTATACTTTAAATGAAACATGCATTGAATCTCGTAAAAGTCTCCAATCTTTTCATGATTAG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * *
90055 GATCCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCCTTGGTGTCGCAAGAGAAGC
66 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* *
90120 TTTGCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACTC
131 TTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
90185 ATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATGA
196 ATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATGA
* * *
90250 TATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCACCCCAATTTTTGTAAAGTATATGTTCAT
261 TATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTC-CCCCAATTTTTGTAAATTCTATGTTCAT
* * * *
90315 TCCTCAAATTAGACAAACATGGATTCTAGTAAGGATCTTCATTCAATTCGTGATTTGGCACTATA
325 GCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATA
* * *
90380 AACAGATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTCTGCATGAAAATCTTTTCTTT
390 AACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
*
90445 GCCTTATTTTCCTTAAAATAA
455 GCCTTATTTTCCTTAAAATCA
* *
90466 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGATTAG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * *
90531 GATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTG-CTGCAAGAGAAG
66 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC-GCAAGAGAAG
*
90595 CTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
130 CTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * * *
90660 CATACTAATTCCCATTCTTTTAAGGATTAGGCATCATAAACATAGTCTTCTCATAAGGATAAAGG
195 CATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATG
* * ** *
90725 ATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACTGATTTTTGTAAATTCTATGTTCG
260 ATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCC-CCAATTTTTGTAAATTCTATGTTCA
* * * *
90790 TGCATCAAATAAGACAAACATGGATTCTTGTAAGGATCTGCATTCATTTCGTGATTAGGCACTAT
324 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTAT
* * * * *
90855 AAACTCATTCTCCTTAATAGAATAAATGATATTGATAGTTTTCTTTTGCATGGAAATCTTTT-TT
389 AAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
90919 GTGCCTTATTTTCCTTAAAATCA
454 -TGCCTTATTTTCCTTAAAATCA
* * *
90942 AAGTTTGTATTTTAAATGAGACATGCATTGATTCTTGTAAAAGTGTCCATTCTTTTCAAGATT-G
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
*
91006 AGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
66 -GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* *
91071 CTTTGCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATACT
130 CTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
91136 CATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATG
195 CATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATG
* * *
91201 ATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCACCCCAATTTTTGTAAAGTATATGTTCA
260 ATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTC-CCCCAATTTTTGTAAATTCTATGTTCA
* * * *
91266 TTCCTCAAATTAGACAAACATGGATTCTAGTAAGGATCTTCATTCAATTCGTGATTTGGCACTAT
324 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTAT
* * *
91331 AAACAGATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTCTGCATGAAAATCTTTTCTT
389 AAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
* *
91396 TGCCCTATTTTCCTTAAAATAA
454 TGCCTTATTTTCCTTAAAATCA
* * *
91418 AAGTTTCTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGATTAG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * * *
91483 GATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAGAAGC
66 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* *
91548 TTTTTTTTCCACC-ATAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
131 TTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* * * * *
91612 ATACTAATTCCAATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATTAAGGA
196 ATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATGA
* * * * *
91677 TATTGATGTTTTCGTTTAGCAAGAAATGCTTTTTTCCCACTAATTTTTGTAAATTCTATGTTCAT
261 TATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCC-CCAATTTTTGTAAATTCTATGTTCAT
* * * * * *
91742 GCCTCAAATAAGACAAGCATGGATTCTAGTAAGGATCTTCTTTCATTTCGGGATTAGGCATTCTA
325 GCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATA
* * * * *
91807 AACACTTTCTCCTCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGAAAATCTTTTCTTT
390 AACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
* *
91872 GCCTCATTTTCCCTAAAATCA
455 GCCTTATTTTCCTTAAAATCA
* * * * * *
91893 AAGTTTGCATTTTAATTGAGACATGCATTGATTCTTGTAAAGGTCTCCATTCTTTTCAAGCTT-G
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* *
91957 AGAACCAAAAACACATTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAAAAG
66 -GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * *
92022 CTTGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACT
130 CTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * *
92087 TATGCTAATCCACATTCTTTTCT-GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAT
195 CATACTAATCCCCATTCTTTT-TAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAT
* * * *
92151 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTCCCCCCAATTTTTGTAAAGTATAAGTTCA
259 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCCCCAATTTTTGTAAATTCTATGTTCA
* * *
92216 TTCCTCATATTAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTAT
324 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTAT
* * *
92281 AAACAGATTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCATGAAAATCTTTTCTT
389 AAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
92346 TGCCTTATTTTCCTTAAAATCA
454 TGCCTTATTTTCCTTAAAATCA
* * *
92368 AAGTTTGTACTTTAAATGAGACATGCCTTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGATTAG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * * * * * *
92433 GATCCAAAACCACTTTCCCTTCATTAGGATAAATGACATTGAGGCTTTGGTGTTGCAAGAAAAGC
66 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* *
92498 TTTTTTTTCCACCGATAATGATAAAAT-AAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
131 TTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* * * * * * *
92562 ATACTAATTCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTGTCATTAGGATAAAGGT
196 ATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATGA
* * * *
92627 TATTGATGATTTGGTTTCGTAGGAAATGCTTTTTTCCCCCTAATTTTTGTAAATTCTATGTTCAT
261 TATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCCCC-AATTTTTGTAAATTCTATGTTCAT
* *
92692 GCCTCAAATGAGAAAAACATGGATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATA
325 GCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATA
* * **
92757 AACACATTCTCCTTAATAGGATAAATGATATTGATGGTTTTCTTTTGTGTGGAAATCTTTTCTTT
390 AACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
92822 GCCTTATTTTCCTTAAAATCA
455 GCCTTATTTTCCTTAAAATCA
* *
92843 AAGTTTGTATTTTAAATGAGACATTCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATT-G
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* ** *
92907 AGAACCAAAAACAAATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAGAGAAG
66 -GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * * * * *
92972 CCTTTCTTTCCACCGTTATTAATAGAGTTAAAGTTCGTCTCTTAAATAAGAGAAACAT-AATACT
130 CTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * * * *
93036 CATACTAATCCACATTCTTTTTTGGATTAGGCACCATAAACATAG---TCTAATAGGGATACATG
195 CATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATG
* * **** * *
93098 ATAATGATGCTTTGGATTCGCAAGAAACGCTTCCCCCCCCCCCCCAATTTTTGT-AATATATAAG
260 ATATTGATGCTTTGGTTTCGCAAGAAACGCTT----TTTTCCCCCAATTTTTGTAAAT-TCTATG
* * * * * * *
93162 TTCATTCCTTAAATAAGACAGACATTGATTCTAGTAAGGATCTTCTTTCATTTCGGGATTAGGCA
320 TTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCA
* * * * *
93227 TTATAAACACTTTCTCCTCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAATCTTT
385 CTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTT
* ** *
93292 TCTTTGCCTCATTTTCCCCAAAGTCA
450 TCTTTGCCTTATTTTCCTTAAAATCA
* * * * * * * *
93318 AAGTTCGCATTTTAATTGAGACAAGCATTGATTCTCGTAAAGGTCTCCACTCTTTCCAAGATTAG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * * * *
93383 GATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCACGAGAAGC
66 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* *
93448 TTTTTTTTTCCACCGTTAATAATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
131 -TTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * * * *
93513 CATACTAATCCCCATTCTTTTCAGGATTACGCTCCATAAACATAGTCTTCTCATAAGGATACAGG
195 CATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATG
* * * * *
93578 ATATTGATGATTTGGTTAT-GCAAGAAATGCTTTTTTCCCATCAATTTCTATAAATTCTATGTTC
260 ATATTGATGCTTTGGTT-TCGCAAGAAACGCTTTTTTCCC-CCAATTTTTGTAAATTCTATGTTC
* * * * *
93642 GTGTCTCAAATGAGACAAACATAGATTCTAGTAAGAATCTTCATTCATTTCGTGATTAGGCACAA
323 ATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* ** * * *
93707 TAAACACAATCTCCTTGTCACGATACATGATATTGATGGTTTTCTTTTGCAT-GAAATCTTTTCT
388 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
*
93771 TTGTCTTATTTTCCTTAAAATCA
453 TTGCCTTATTTTCCTTAAAATCA
* *
93794 AAGTTTGTATTTTAATTGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATT-G
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * * *
93858 AGAACCAAAAACAAATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTCTCTCAAGAGAAG
66 -GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * * * *
93923 CCTTTCTTTCCACCGTTATTAATAGAATCAAAGTTTGTCTCTTAAATATGATAAACATAAATACT
130 CTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * * * *
93988 CATACTAATCCACATTCTTTTTTGGATTAGGCACCATAAACATAGTCTTCTCTTAGGGATACATG
195 CATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATG
* * * * *
94053 ATAATGATGCTTTGGATTCGCAAGAAACGC-TTATTCGCCCCAATTTTTGT-AATGTATAAGTTC
260 ATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTC-CCCCAATTTTTGTAAAT-TCTATGTTC
** * * * *
94116 ATTTCTCAAATGAGACAGACATGGATTCTAGTAAGGATCTTCCTTCATTTCGAGATTAGGCATTA
323 ATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * * *
94181 TAAACACTTTCTCCTCATTAGGATAAATGATATTAATTGTTTTCTTTTGCCTGGAAATCTTTTCT
388 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
*
94246 TTGCCTCA-TTTCCTTAAAATCA
453 TTGCCTTATTTTCCTTAAAATCA
* * * * * * *
94268 AATTTTTTATTTTAATTAAGACATGCATTGATTCTCGTAAAAGTCTCCAGTCTTTCCAAGATTAG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * * * *
94333 GATCCAAAAACACTTTTCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAGAAGC
66 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* * *
94398 TTTTTTTTCCACCGTTAATGATAAAATCAATGTTTGTCTCTTAAATAAGACAAACATTAATACTC
131 TTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* * * * *
94463 ATACTAATCCCCATTCTTTTCAGGATTGGGCACCATAAACATAGTCCTCACATAAGGATACA-GT
196 ATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATG-
* * * * *
94527 ATATTGATGATTTGGTTTTGCAAGAAATGCTTTTTTCCCATCAATTTCTGTAAATTCTATGTTCA
260 ATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCC-CCAATTTTTGTAAATTCTATGTTCA
* * *
94592 TGCCTCAAATGAGACAAACATGGATTCTTGTAAGGATCTTCATTCATTTCGTGATTAAGTACTAT
324 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTAT
* ** * * *
94657 AAACACAATCTCCTTGTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
389 AAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
*
94722 TACCTTATTTTCCTTAAAATCA
454 TGCCTTATTTTCCTTAAAATCA
* * * *
94744 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATT-TGTTTTAAGATTG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCT-TTTCAAGATTA
* * *
94808 GGAACCAAAAACACTTTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAAAAG
65 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * * *
94873 CTTGTCTTTCCACTATTATTGAGAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
130 CTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * * *
94938 TATGCTAATCCACATTCTTTTCT-GGATTAGGCACCATAAAAATAGTCTTCTCATAAGGATAAAT
195 CATACTAATCCCCATTCTTTT-TAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAT
* * * *
95002 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCTCCCCAATTTTTGTAAAGTATAAGTTC
259 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTC-CCCCAATTTTTGTAAATTCTATGTTC
* * * * *
95067 ATTCCTTATATTACACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
323 ATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * * *
95132 TAAACAGATTCCCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGGATGAAAATCTTTTCT
388 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
*
95197 TTGCCTTATTTTCCTTAAAATAA
453 TTGCCTTATTTTCCTTAAAATCA
* *
95220 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGATTAG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * * * * * *
95285 GATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGAGGCTTTGGTGTTGTAAGAAAAGC
66 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* * *
95350 TTTTTTTTCCATCGATAATGATAAAAT-AAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
131 TTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
** * * * * *
95414 ATACTAATTTCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTGTCATTAGGATAAAGGT
196 ATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATGA
* * * *
95479 TATTGATGATTTGGTTTCGGAGGAAATGCTTTTTTCCCCCTAATTTTTGTAAATTCTATGTTCAT
261 TATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCCCC-AATTTTTGTAAATTCTATGTTCAT
* * *
95544 GCCTCAAATAAGACAAACATAGATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATA
325 GCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATA
* * * *
95609 AACATATTCTCCTTAATAGGATAAATGATATTGATGGTTTTCTTTTGCGTGGAAATCTTTTCTTT
390 AACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
*
95674 GCCTTATTTTCCTTTAAATCA
455 GCCTTATTTTCCTTAAAATCA
* *
95695 AAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGCTT-G
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * ** *
95759 AGAACCAAAAACACATTCCTTTCATTGGGATACATGACATTGATGCTTTGGTGTCATAAAAGAAG
66 -GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * *
95824 CTTGTCTTTCCACCGTTATTGATAGAATCAAAATTTGTCTCTTAATTAAGACAAACATGAATACT
130 CTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * * * * * *
95889 CATACCAATCCACATTCTTTTCT-GGATTAGGCACCGTAAAAATAGTCTTCTCATAAAGATACAG
195 CATACTAATCCCCATTCTTTT-TAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAT
* * * * *
95953 GATATTGCTGATTTGGCTTT-GCAAGAAACTCTTTTTTCCCAACAATTTTTGTAAATTCTAAGTT
259 GATATTGATGCTTTGG-TTTCGCAAGAAACGCTTTTTTCCC-CCAATTTTTGTAAATTCTATGTT
* * * * * *
96017 CGTGCCTCAAATGAGACAGACATGGATGCTAGGAAGGATCTTCATTCATTTCGTAATTGGGCACT
322 CATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT
* * * *
96082 ATAAACTCATTCTCCTCATTCGGATACATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTC
387 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
*
96147 TTTGCATTATTTTCCTTAAAATCA
452 TTTGCCTTATTTTCCTTAAAATCA
* *
96171 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * * * *
96236 GAACTAAAAACACATTACCTTCATTAGGATACATGACATTGATGCTTTGGTATCGTAAAAGAAGC
66 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* * *
96301 TTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTCCTAAATAAGACTAACATGAATACTC
131 TTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* * * * *
96366 ATACTAATCCCCATTCTTTTCAAGATTAGGCACCGTAAACATAGTCTTCTCATAAGGATACAGGA
196 ATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATGA
* * * *
96431 TATTGATGATTTGGTTTCGCAAGAAACGATTTTTTCCCGTCAATTTTTGTAAATTCTATGTTCGT
261 TATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCC-CCAATTTTTGTAAATTCTATGTTCAT
* * * *
96496 GGCTCAAATGAGACAAACATGGATTCTACTAAGGATATTCATTCATTTCGTGATTAGACACTATA
325 GCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATA
* * *
96561 AACATATTCTCCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGCATGAAAATCTTTTCTTT
390 AACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
*
96626 GCCTTATTTTCATTAAAATCA
455 GCCTTATTTTCCTTAAAATCA
* * *
96647 AAGTTTGTACTTTAAATGAGACATGCATTGAGTCTCGTAAAAGTCTCCAATCTTTTCAAGATTGG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
* * * *
96712 GAACCAAAAACACATTTCTTTCATTAGGATACATGACATTGATACTTTGGGGTCGCAAGAGAAGC
66 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* * ** * *
96777 TTTTCTTTCTACCATT-ATGGATGGAATCAAAGTTTGTCACTTAAATAAGACAAATATGAATACT
131 TTTTCTTTCCACCGTTAAT-GATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * * **
96841 CATACTAATCCCTATTCTTTTTAGGATTAGGCACCATAAACACAGTCTTCTCATAAAGATGCATG
195 CATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATG
* * * *
96906 ATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCG
260 ATATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCC-CCAATTTTTGTAAATTCTATGTTCA
* * * * * *
96971 TGCGTCAAATGAGACAAACATGGATTCTAGCAAGGATCTTCCTTCATTTCATGATTAGGCATTAC
324 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTAT
*
97036 AAGCACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCAT
389 AAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCAT
97087 AAGTTTGTAC
Statistics
Matches: 6217, Mismatches: 819, Indels: 122
0.87 0.11 0.02
Matches are distributed among these distances:
472 36 0.01
473 4 0.00
474 521 0.08
475 2032 0.33
476 3395 0.55
477 183 0.03
478 5 0.00
480 40 0.01
481 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (475 bp):
AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTAG
GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
TTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
ATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATGA
TATTGATGCTTTGGTTTCGCAAGAAACGCTTTTTTCCCCCAATTTTTGTAAATTCTATGTTCATG
CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
CCTTATTTTCCTTAAAATCA
Found at i:95208 original size:158 final size:157
Alignment explanation
Indices: 94095--95683 Score: 413
Period size: 158 Copynumber: 10.0 Consensus size: 157
94085 ATTCGCCCCA
** * * * * * *
94095 ATTTTTGTAATGTATAAGTTCATTTCTCAAATGAGACAGACATGGATTCTAGTAAGGATCTTCCT
1 ATTTTTGTAAAATATAAGTTCATTCCTTAAATAAGACAAACATGGATTCTAGTAAGAATCTTCAT
* ** * * * *
94160 TCATTTCGAGATTAGGCATTATAAACACT-TTCTCCTCATTAGGATAAATGATATTAATTGTTTT
66 TCATTTCGTGATTAGGCACCATAAACA-TATTCCCCTCATTAGGATAAATGATATTGATGGTTTG
** * *
94224 CTTTTGCCTGGAAATCTTTTCTTTGCCTC
130 CTTTTGGATGAAAATCTTTT-TTTGCCTT
* * * * ** * *
94253 ATTTCCT-TAAAATCA-AATTTTTTATT--TTAATTAAGACATGCATTGATTCTCGTAA-AAGTC
1 ATTT-TTGTAAAAT-ATAA--GTTCATTCCTTAAATAAGACAAACATGGATTCTAGTAAGAA-TC
* * ** * * * * *
94313 TCCAGTC-TTTCCAAGATTAGG-ATCCAAAAACACT-TTTCCTTCATTAGGATACATGACATTGA
61 TTCATTCATTT-CGTGATTAGGCA-CCATAAACA-TATTCCCCTCATTAGGATAAATGATATTGA
* * * * * * * * **
94375 TGCTTTGGTGTTGTAAGAGAAGCTTTTTTTTCCACC
123 TGGTTTGCTTTTGGATGAAAATCTTTTTTTGCC-TT
* ** * ** * **
94411 GTTAATGATAAAATCA-ATGTT--TGTCTCTTAAATAAGACAAACATTAATACTCA-TACTAATC
1 ATTTTTG-TAAAAT-ATAAGTTCAT-TC-CTTAAATAAGACAAACATGGATTCT-AGTAAGAATC
** * * * * * * *
94472 CCCATTCTTTTCAG-GATTGGGCACCATAAACATAGTCCTCACATAAGGATACA-GTATATTGAT
61 TTCATTCATTTC-GTGATTAGGCACCATAAACATATTCCCCTCATTAGGATAAATG-ATATTGAT
* * * * * *
94535 GATTTGGTTTTGCAAG-AAATGC-TTTTTTCCCATCA
124 GGTTTGCTTTTGGATGAAAAT-CTTTTTTTGCC-T-T
* * * * * * * * *
94570 ATTTCTGTAAATTCTATGTTCATGCCTCAAATGAGACAAACATGGATTCTTGTAAGGATCTTCAT
1 ATTTTTGTAAAATATAAGTTCATTCCTTAAATAAGACAAACATGGATTCTAGTAAGAATCTTCAT
* * * * * * ** * * * *
94635 TCATTTCGTGATTAAGTACTATAAACACAATCTCCTTGTCACGATACATGATATTGATGGTTTTC
66 TCATTTCGTGATTAGGCACCATAAACATATTCCCCTCATTAGGATAAATGATATTGATGGTTTGC
* * *
94700 TTTTGCATGGAAATCTTTTCTTTACCTT
131 TTTTGGATGAAAATCTTTT-TTTGCCTT
** * * * ** * * *
94728 ATTTTCCT-TAAAATCA-AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGCAA-AAGTCT
1 ATTTT--TGTAAAAT-ATAAGTTCATTCCTTAAATAAGACAAACATGGATTCTAGTAAGAA-TCT
* ** *** * * * * * ** *
94790 CCATTTGTTTTAAGATTGGGAACCAAAAACACT-TTCCCTTCATTAGGATACATGACGTTGATGC
62 TCATTCATTTCGTGATTAGGCACCATAAACA-TATTCCCCTCATTAGGATAAATGATATTGATGG
* * * * * * * *
94854 TTTGGTGTCGCAAGAAAAGCTTGTCTTT-CCACT
126 TTTGCTTTTGGATGAAAATCTT-TTTTTGCC-TT
* * * *
94887 ATTATTG-AGAGAATCA-AAGTT--TGTCTCTTAAATAAGACAAACATGAATACT--TATGCTAA
1 ATTTTTGTA-A-AAT-ATAAGTTCAT-TC-CTTAAATAAGACAAACATGGATTCTAGTAAG--AA
** * * * ** *
94946 TCCACATTCTTTTC-TGGATTAGGCACCATAAAAATAGTCTTCTCATAAGGATAAATGATATTGA
59 TCTTCATTCATTTCGT-GATTAGGCACCATAAACATATTCCCCTCATTAGGATAAATGATATTGA
* * * * * ** * * **
95010 TGCTTTGGTTTCGCAAGAAACGCTTTCTTCTCCCCA
123 TGGTTTGCTTTTGGATGAAAATCTTT-TTTTGCCTT
* * * * *
95046 ATTTTTGTAAAGTATAAGTTCATTCCTTATATTACACAAACATGGATTCTAGTAAGGATCTTCAT
1 ATTTTTGTAAAATATAAGTTCATTCCTTAAATAAGACAAACATGGATTCTAGTAAGAATCTTCAT
* * *
95111 TCATTTCGTGATTAGGCACTATAAACAGATTCCCCTCATTAGGATAAATGATATTGATGGTTTTC
66 TCATTTCGTGATTAGGCACCATAAACATATTCCCCTCATTAGGATAAATGATATTGATGGTTTGC
95176 TTTTGGATGAAAATCTTTTCTTTGCCTT
131 TTTTGGATGAAAATCTTTT-TTTGCCTT
* ** * * * ** * * *
95204 ATTTTCCT-TAAAATAAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAA-AAGTCTC
1 ATTTT--TGTAAAATATAAGTTCATTCCTTAAATAAGACAAACATGGATTCTAGTAAGAA-TCTT
* ** * * *
95267 CACTC-TTTCCAAGATTAGG-ATCCAAAAACACT-TTCCCTTCATTAGGATAAATGACATTGA-G
63 CATTCATTT-CGTGATTAGGCA-CCATAAACA-TATTCCCCTCATTAGGATAAATGATATTGATG
* * * * * * *
95328 GCTTTGGTGTTGTAAGAAAAGCTTTTTTTTCCATCG
125 G-TTTGCTTTTGGATGAAAATCTTTTTTTGCC-T-T
** * * **
95364 A-TAATGATAAAATA-AAGTT--TGTCTCTTAAATAAGACAAACATGAATACTCA-TACTAAT-T
1 ATTTTTG-TAAAATATAAGTTCAT-TC-CTTAAATAAGACAAACATGGATTCT-AGTAAGAATCT
* * *** * *
95423 TCCATTCTTTTCAG-GATTAGGCACCATAAACATAGTCTTGTCATTAGGATAAAGGTTATTGATG
62 T-CATTCATTTC-GTGATTAGGCACCATAAACATATTCCCCTCATTAGGATAAATGATATTGATG
* * * * ** *
95487 ATTTGGTTTCGGA-GGAAATGCTTTTTTCCCCCTA
125 GTTTGCTTTTGGATGAAAAT-CTTTTTT-TGCCTT
* * * * * * * *
95521 ATTTTTGTAAATTCTATGTTCATGCCTCAAATAAGACAAACATAGATTCTAGTAAGGATCTGCAT
1 ATTTTTGTAAAATATAAGTTCATTCCTTAAATAAGACAAACATGGATTCTAGTAAGAATCTTCAT
* * * * *
95586 TCATTTCGTGATTAGGCACTATAAACATATTCTCCTTAATAGGATAAATGATATTGATGGTTTTC
66 TCATTTCGTGATTAGGCACCATAAACATATTCCCCTCATTAGGATAAATGATATTGATGGTTTGC
*
95651 TTTTGCG-TGGAAATCTTTTCTTTGCCTT
131 TTTTG-GATGAAAATCTTTT-TTTGCCTT
95679 ATTTT
1 ATTTT
95684 CCTTTAAATC
Statistics
Matches: 1028, Mismatches: 311, Indels: 184
0.67 0.20 0.12
Matches are distributed among these distances:
155 1 0.00
156 2 0.00
157 36 0.04
158 517 0.50
159 441 0.43
160 31 0.03
ACGTcount: A:0.30, C:0.17, G:0.15, T:0.38
Consensus pattern (157 bp):
ATTTTTGTAAAATATAAGTTCATTCCTTAAATAAGACAAACATGGATTCTAGTAAGAATCTTCAT
TCATTTCGTGATTAGGCACCATAAACATATTCCCCTCATTAGGATAAATGATATTGATGGTTTGC
TTTTGGATGAAAATCTTTTTTTGCCTT
Found at i:97695 original size:159 final size:159
Alignment explanation
Indices: 97087--100538 Score: 562
Period size: 159 Copynumber: 21.9 Consensus size: 159
97077 TCTTTTGCAT
* ** * *
97087 AAGTTTGTACTTTAAACGAGACATGCATTGATTCTTGTAAAAGTCTCCATTC-TTTT-ATAATT-
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTG-CAAAGTCTCCATTCGTTTTGA-GATTA
* * * *
97149 GGAAACCAAAAAACACATTCCCTTCATTAGGATACATGGCAATGTTGCTTTGGTGTTGCAAGAGA
64 GG-AACC-AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGA
* * * ** **
97214 AGCTTGTCTTT-CCACCGTTATT-GATGGAATCA
127 AGCTTTTCTTTGCCATCATT-TTCCTTAAAATCA
* * * * * * * *
97246 AAGTTTGT-CTCTTAAATAAGGCAAATA-TGAATACTCATACTAA-TCTACATTCTTTTCTG-GA
1 AAGTTTGTACT-TTAAATGAGACAAACATTG-AT--TCTTGCAAAGTCTCCATTCGTTT-TGAGA
* * * * * * *
97307 TTA-G-A-CAGAATAACATAGTCTTCTT-ATAAGGATACATGATATTGATGCTTTGGTTTCGCGA
61 TTAGGAACCA-AA-AACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * * * * *
97368 GATACGC-TTTC-TTCCCACCAATTT-GTGTAAAGT-A
123 GAGAAGCTTTTCTTTGCCATCATTTTCCT-TAAAATCA
* * * * * ** * * * *
97402 CGAGTTCAT-TGC-TCAAATGAGACAAACATGGATTCCTGCAGGGATCTTCATTCATTTGGGGAT
1 -AAGTT--TGTACTTTAAATGAGACAAACATTGATTCTTGCAAAG-TCTCCATTCGTTTTGAGAT
* * * * * * * ** * *
97465 TAGGCACTATAAACACATTCTCCTT-TTTAGGATAAATGATATTGATGGTTTTCTTTCGCATG-G
62 TAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG
* *
97528 AAATCTTTTCTTTGCC-TTATTTTCCTTAAAATCA
126 -AAGCTTTTCTTTGCCATCATTTTCCTTAAAATCA
* **
97562 AAGTTTGTACTTTAAATGAGGCATGCATTGATTCTTGCAGAAGTCTCCATTCGTTTTGAGATTAG
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTGCA-AAGTCTCCATTCGTTTTGAGATTAG
*
97627 GAACCAAAAACACATTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAGAAGC
65 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* * ** **
97692 TTTTCATT-CCACCATTAACGATAAAATCA
130 TTTTCTTTGCCATCATTTTCCTTAAAATCA
* ** * * * * *
97721 AAGTTTGT-CTCTTAAATAAGACAAACA-TGAACACACATACTAATTC-CCATTC-TTTTCAGGA
1 AAGTTTGTACT-TTAAATGAGACAAACATTG---ATTCTTGCAAAGTCTCCATTCGTTTTGA-GA
** * * * * * ** * * * * *
97782 TTAGGCTCCATAAACATAGT-CTTCTCATAAGGATGTAGGATATTGATGATTTGGT-TATGTAAG
61 TTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGT-CGCAAG
* * * *
97845 A-AACGC-TTT-TTTCCCATCAATTT-CTGTAAATTCT
124 AGAA-GCTTTTCTTTGCCATCATTTTCCT-TAAAATCA
* * * * * * * * * * * * *
97879 ATGTTCGTGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAG
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTGCAAAG-TCTCCATTCGTTTTGAGATTAG
* * * * * * ** * * *
97944 GCA-CAAGAAACACAATCTCCTT-ATCACGATACATGATATTGATGGTTTTCTTTTGCATG-GAA
65 GAACCAA-AAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG-A
** * *
98006 ATATTTTTTTTGCC-TTATTTTCCTTAAAATCA
127 AGCTTTTCTTTGCCATCATTTTCCTTAAAATCA
** * *
98038 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCGTTTTAAGATTGG
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTGC-AAAGTCTCCATTCGTTTTGAGATTAG
* * * *
98103 GAACCAAAACCACATTGCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAAAAGC
65 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* * * ** *
98168 TTGTCTTT-CCACCGTTATT-GATAGAATCA
130 TTTTCTTTGCCATCATT-TTCCTTAAAATCA
* * * * *
98197 AAGTTTG-ACTCTTAAGTAAGACAAACA-TGAATACTCATGCTAA-TGCAT--ATTCTTTTCTG-
1 AAGTTTGTACT-TTAAATGAGACAAACATTG-AT--TCTTGCAAAGT-C-TCCATTCGTTT-TGA
* ** * * * * * *
98256 GATTAGGCACCGTAAACATAGT-CTTCTCA-TAGGGATAAATGATATTGATGCTTTGGTTTCGCA
59 GATTAGGAACCAAAAACACATTCCCT-TCATTA-GGATACATGACATTGATGCTTTGGTGTCGCA
* * *
98319 AGA-AATGC-TTCCTTT-CCCTCAATTTT--TGTAAAGT-A
122 AGAGAA-GCTTTTCTTTGCCATC-ATTTTCCT-TAAAATCA
* * * * * * * * * * * * *
98354 TAAG-TTGATTCCTAAAATTAGACAGACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATT
1 -AAGTTTG-TACTTTAAATGAGACAAACATTGATTCTTGCAAAG-TCTCCATTCGTTTTGAGATT
* * * * * * * * * ** * * ** *
98418 AGGCACTATAAACAGATTCTCC-TCATTAAGATAAAGGATATTGATGGTTTTCTTTTGCTTGAAA
63 AGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGA
* * *
98482 ATCTTTTCTTTGCC-TTATTTTACTTAAAATCA
127 AGCTTTTCTTTGCCATCATTTTCCTTAAAATCA
* * ** * *
98514 AAGTTTATACTTTAAATGGGACAGGCATTGATTCTCGTG-AAAGTCTCCACTC-TTTCTAAGATT
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCT--TGCAAAGTCTCCATTCGTTT-TGAGATT
* * * * * *
98577 CGGATCCAAAAACACTTTTCCTTGATTAGGATAAATGACATTGATGCTTTGGTG-CTGCAAGAGA
63 AGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC-GCAAGAGA
** * * * **
98641 AG-TTTT-TTTTTCACCGTTAAT-GATAAAATCA
127 AGCTTTTCTTTGCCATCATT-TTCCTTAAAATCA
* * * ** * *
98672 ATGTTTGT-CTCTTAAATAAGACAAACA-TGAATACTCACACTAATTC-CCATTC-TTTTCAGGA
1 AAGTTTGTACT-TTAAATGAGACAAACATTG-ATTCTTGCA--AAGTCTCCATTCGTTTTGA-GA
* * * * * * * * * * * *
98733 TTAGGCACCATAAACATAGT-CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGTAAGA
61 TTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
** * * * *
98797 -AATGC-TTT-TTCCCCCTAATTTT--TGTAAATTCT
125 GAA-GCTTTTCTTTGCCATCATTTTCCT-TAAAATCA
* * * * * * * * * * * *
98829 ATGTTTGTGCCTCAAATAAGACAAACATTGATTCTAGTAAGGATCTGCATTCATTTCGTGATTAG
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTGCAAAG-TCTCCATTCGTTTTGAGATTAG
* * * * * * * ** * *
98894 GCACTATAAACACATTCTCCTT-AATAGGATAAATGATATTGATGGTTTTCTTTGGCAAG-GAAA
65 GAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG-AA
* * *
98957 TCTTTTCTTTGCC-TTATTTTCTTTAAAATCA
128 GCTTTTCTTTGCCATCATTTTCCTTAAAATCA
* ** * * * *
98988 AAGTTTGTATTTTAAATGAGACATGCATCGATTCTCGTAAAAGTCTCCATTC-TTTTCAAGATT-
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTG-CAAAGTCTCCATTCGTTTT-GAGATTA
* * *
99051 GAGAACCAAAAACACATTCCTTTCATTAGGATACATGGCATTGATACTTTGGTGTCGCAAGAGAA
64 G-GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA
* * ** *
99116 GCTTGTCTTT-CCA-CGGTTATT-GATAGAATCA
128 GCTTTTCTTTGCCATC-ATT-TTCCTTAAAATCA
* * *
99147 AAG--T-TA---T--A--AGACAAACA-TGAATATT-CATACTAGTC-CACATTCTTTTCTG-GA
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTGCA-A--AGTCTC-CATTCGTTT-TGAGA
* ** * * * * * * * * *
99198 TTAGGCACTGTAAAA-ATAGT-CTTCTCATAAAGATTCAGGATATTGATGATTTGGCT-TCGCAA
61 TTAGGAAC-CAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGG-TGTCGCAA
* * * **
99260 GA-AA-CTCTTT-TTTCCCACCAATTTT--TGTAAATTTT
123 GAGAAGCT-TTTCTTTGCCATC-ATTTTCCT-TAAAATCA
* * * * * * * * * * * *
99295 AAGTTTGTGCCTCAAATGAGATAGACATGGATTCTAGTAAGGATCTTCATTC-ATTTCATGATTA
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTGCAAAG-TCTCCATTCGTTTTGA-GATTA
* * * * * * ** * * ***
99359 TGCACTATAAACACATTCTCC-TCATTAGGATACATGATATTGATGGTTTTCTTTTGTGTG-GAA
64 GGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG-A
* *
99422 AACTTTTCTTTGCC-TTATTTTCCTTAAAATCA
127 AGCTTTTCTTTGCCATCATTTTCCTTAAAATCA
* ** * * ** *
99454 AAGTTTGTACTTTAAATGAGGCATCCATTGATTCTCGTAAAAGTCTCCATTC-TTTCCAAGATTG
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTG-CAAAGTCTCCATTCGTTT-TGAGATTA
* * *
99518 GGAACCAAAAACACATTACCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAGAAG
64 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * **
99583 CTCTTCTTT-CCACCGTTAAT-GATAAAATCA
129 CTTTTCTTTGCCATCATT-TTCCTTAAAATCA
* * * * * *
99613 AAGTTTAT-CTCTTAAATAAGATAAACA-TGAATAC-T-CATACA-TCCCCATTC-TTTTCAGAA
1 AAGTTTGTACT-TTAAATGAGACAAACATTG-ATTCTTGCA-A-AGTCTCCATTCGTTTTGAG-A
* * ** * * * * * *
99672 TTAGGCACCATAAACTTAGT-CTTCTCATAAGGATACAGGACATTGATGTTTTGGTTTCGCAAGA
61 TTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * * *
99736 -AACGC-TTT-TTTCCCATCAATTT-CTGTAAATTCT
125 GAA-GCTTTTCTTTGCCATCATTTTCCT-TAAAATCA
* * * * * * * * * * *
99769 ATGTTCGTGGC-TCAAATGAGACAAACATGGATTC-TACTAAGGTTCTTCATTCATTTCGTGATT
1 AAGTTTGT-ACTTTAAATGAGACAAACATTGATTCTTGC-AAAG-TCTCCATTCGTTTTGAGATT
* * * * * * * * * * ** * * * *
99832 AGGCACTATAAACATATT-CTTCTCATTAGGACAAATGATACTT-AAGGTTTTTTTTTGCATGAA
63 AGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACA-TTGATGCTTTGGTGTCGCAAGAG
* *
99895 AATCTTTTCTTTGCC-TTATTTTCCTTAAAATCA
126 AAGCTTTTCTTTGCCATCATTTTCCTTAAAATCA
** * * * * *
99928 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCAATC-TTTTCAAGATTG
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTG-CAAAGTCTCCATTCGTTTT-GAGATTA
* * * *
99992 GGAACCAAAAACACATTTCTTTCATTAGGAGACATGACATTGATGCTTTGGTATCGCAAGAGAAG
64 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** *
100057 CTTGTCTTT-CCACCGTTATT-GATAGAATCA
129 CTTTTCTTTGCCATCATT-TTCCTTAAAATCA
* * * * * *
100087 AAGTTTGT-CTCTTAAATAAGACAAACA-TGAATAC-T-CATACTAATCCATAATC-TTTTATAG
1 AAGTTTGTACT-TTAAATGAGACAAACATTG-ATTCTTGCAAAGT-CTCCAT--TCGTTTT-GAG
* * * * * * * * * * *
100147 ATTAGGCACCGTAAAA-ATAGT-CTTCTCATAAGGATACAGGATATTGATGATTTGGTTTTGCAA
60 ATTAGGAACC-AAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * **
100210 GA-AATGC-TTT-TTTCCCACCAATTTT--TGAAAATTTT
123 GAGAA-GCTTTTCTTTGCCATC-ATTTTCCTTAAAA-TCA
** * * * * * * * *
100245 AAG--T-T-CTTGCCAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTC-ATGTCATGATT
1 AAGTTTGTACTT-TAAATGAGACAAACATTGATTCTTGCAAAG-TCTCCATTCGTTTTGA-GATT
** * * * * * * * ** * *
100305 AGGCGCTATAAACACATTCTCC-TCATTAGGATAAATAATATTTATGGTTTTCTTTTGCAAG-GA
63 AGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG-
* * *
100368 AATCTTTTGTTTGCC-TTATTTTCCTTAAAATCA
126 AAGCTTTTCTTTGCCATCATTTTCCTTAAAATCA
** * * * *
100401 AAGTTTGTACTTTAAATGAGACATGCATTGAATCTTGTAAAAGTCTCCAATC-TTTTCAAGATTA
1 AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTG-CAAAGTCTCCATTCGTTTT-GAGATTA
* * * *
100465 GGATCCAAAAACACATT-CTTTGCATTAGGATACATGACATTGATGCTTTGGTGTCCCAAAAGAA
64 GGAACCAAAAACACATTCCCTT-CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA
100529 GCTTTTCTTT
128 GCTTTTCTTT
100539 CCACCGTTAA
Statistics
Matches: 2309, Mismatches: 738, Indels: 492
0.65 0.21 0.14
Matches are distributed among these distances:
146 1 0.00
147 6 0.00
148 24 0.01
149 59 0.03
150 10 0.00
151 3 0.00
153 1 0.00
154 5 0.00
155 80 0.03
156 78 0.03
157 267 0.12
158 589 0.26
159 1068 0.46
160 103 0.04
161 15 0.01
ACGTcount: A:0.31, C:0.17, G:0.16, T:0.36
Consensus pattern (159 bp):
AAGTTTGTACTTTAAATGAGACAAACATTGATTCTTGCAAAGTCTCCATTCGTTTTGAGATTAGG
AACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCT
TTTCTTTGCCATCATTTTCCTTAAAATCA
Found at i:98026 original size:476 final size:475
Alignment explanation
Indices: 97087--100972 Score: 5083
Period size: 476 Copynumber: 8.2 Consensus size: 475
97077 TCTTTTGCAT
*
97087 AAGTTTGTACTTTAAACGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTTTATA-ATTGG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTTTA-AGATTGG
* * * * *
97151 AAACCAAAAAACACATTCCCTTCATTAGGATACATGGCAATGTTGCTTTGGTGTTGCAAGAGAAG
65 GAACC-AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * *
97216 CTTGTCTTTCCACCGTTATTGATGGAATCAAAGTTTGTCTCTTAAATAAGGCAAATATGAATACT
129 CTTGTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * * ** * *
97281 CATACTAA-TCTACATTCTTTTCTGGATTAGACAGAAT-AACATAGTCTTCTTATAAGGATACAT
194 CATACTAATTC-CCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAG
* * * * * * *
97344 GATATTGATGCTTTGGTTTCGCGAGATACGCTTTCTTCCCACCAATTTGTGTAAAGTAC-GAGTT
258 GATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAAA-TTCTAAGTT
* * * * *
97408 CATTG-CTCAAATGAGACAAACATGGATTCCT-GCAGGGATCTTCATTCATTTGGGGATTAGGCA
322 C-GTGCCTCAAATGAGACAAACATGGATT-CTAGTAAGGATCTTCATTCATTTCGTGATTAGGCA
** *
97471 CTATAAACACATTCTCCTTTTTAGGATAAATGATATTGATGGTTTTCTTTCGCATGGAAATCTTT
385 CTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTT
97536 TCTTTGCCTTATTTTCCTTAAAATCA
450 TCTTTGCCTTATTTTCCTTAAAATCA
* * * * *
97562 AAGTTTGTACTTTAAATGAGGCATGCATTGATTCTTGCAGAAGTCTCCATTCGTTTTGAGATTAG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTC-TTTTAAGATTGG
*
97627 GAACCAAAAACACATTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAGAAGC
65 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* * * * * *
97692 TTTTCATTCCACCATTAACGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAACACAC
130 TTGTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* **
97757 ATACTAATTCCCATTCTTTTCAGGATTAGGCTCCATAAACATAGTCTTCTCATAAGGATGTAGGA
195 ATACTAATTCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGA
* * * *
97822 TATTGATGATTTGGTTAT-GTAAGAAACGCTTTTTTCCCATCAATTTCTGTAAATTCTATGTTCG
260 TATTGATGATTTGGTT-TCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCG
* * *
97886 TGCCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACAAG
324 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTAT
* * * * * * *
97951 AAACACAATCTCCTTATCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATATTTTTTT
389 AAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
98016 TGCCTTATTTTCCTTAAAATCA
454 TGCCTTATTTTCCTTAAAATCA
*
98038 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCGTTTTAAGATTGG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTC-TTTTAAGATTGG
* * * *
98103 GAACCAAAACCACATTGCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAAAAGC
65 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* * * *
98168 TTGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGACTCTTAAGTAAGACAAACATGAATACTC
130 TTGTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* * ** * * * * *
98233 ATGCTAATGCATATTCTTTTCTGGATTAGGCACCGTAAACATAGTCTTCTCATAGGGATAAATGA
195 ATACTAATTCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGA
* * * * * *
98298 TATTGATGCTTTGGTTTCGCAAGAAATGCTTCCTTTCCC-TCAATTTTTGTAAAGTATAAGTT-G
260 TATTGATGATTTGGTTTCGCAAGAAACGCTT-TTTTCCCACCAATTTTTGTAAATTCTAAGTTCG
* * * *
98361 ATTCCTAAAATTAGACAGACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
324 -TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * * * *
98426 TAAACAGATTCTCCTCATTAAGATAAAGGATATTGATGGTTTTCTTTTGCTTGAAAATCTTTTCT
388 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
*
98491 TTGCCTTATTTTACTTAAAATCA
453 TTGCCTTATTTTCCTTAAAATCA
* * * * * * *
98514 AAGTTTATACTTTAAATGGGACAGGCATTGATTCTCGTGAAAGTCTCCACTCTTTCTAAGATTCG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTT-TAAGATTGG
* * * * *
98579 GATCCAAAAACACTTTTCCTTGATTAGGATAAATGACATTGATGCTTTGGTG-CTGCAAGAGAAG
65 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC-GCAAGAGAAG
* * * *
98643 -TTTTTTTTTCACCGTTAATGATAAAATCAATGTTTGTCTCTTAAATAAGACAAACATGAATACT
129 CTTGTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* *
98707 CACACTAATTCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAGG
194 CATACTAATTCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGG
* * * *
98772 ATATTGATGATTTGGTTTCGTAAGAAATGC-TTTTTCCC-CCTAATTTTTGTAAATTCTATGTTT
259 ATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACC-AATTTTTGTAAATTCTAAGTTC
* * *
98835 GTGCCTCAAATAAGACAAACATTGATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTA
323 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * * *
98900 TAAACACATTCTCCTTAATAGGATAAATGATATTGATGGTTTTCTTTGGCAAGGAAATCTTTTCT
388 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
*
98965 TTGCCTTATTTTCTTTAAAATCA
453 TTGCCTTATTTTCCTTAAAATCA
* * * *
98988 AAGTTTGTATTTTAAATGAGACATGCATCGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGA
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTTT-AAGATTGG
* * *
99053 GAACCAAAAACACATTCCTTTCATTAGGATACATGGCATTGATACTTTGGTGTCGCAAGAGAAGC
65 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* * * *
99118 TTGTCTTTCCACGGTTATTGATAGAATCAAA----G----TT--ATAAGACAAACATGAATATTC
130 TTGTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* * ** * * *
99173 ATACT-AGTCCACATTCTTTTCTGGATTAGGCACTGTAAAAATAGTCTTCTCATAAAGATTCAGG
195 ATACTAATTCC-CATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGG
* * * *
99237 ATATTGATGATTTGGCTTCGCAAGAAACTCTTTTTTCCCACCAATTTTTGTAAATTTTAAGTTTG
259 ATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCG
* * * *
99302 TGCCTCAAATGAGATAGACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTATGCACTAT
324 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTAT
* ** *
99367 AAACACATTCTCCTCATTAGGATACATGATATTGATGGTTTTCTTTTGTGTGGAAAACTTTTCTT
389 AAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTT
99432 TGCCTTATTTTCCTTAAAATCA
454 TGCCTTATTTTCCTTAAAATCA
* * * *
99454 AAGTTTGTACTTTAAATGAGGCATCCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTT-TAAGATTGG
* * *
99519 GAACCAAAAACACATTACCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAGAAGC
65 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* *
99584 TCT-TCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTCTTAAATAAGATAAACATGAATACT
130 T-TGTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * *
99648 CATAC--ATCCCCATTCTTTTCAGAATTAGGCACCATAAACTTAGTCTTCTCATAAGGATACAGG
194 CATACTAATTCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGG
* * * * *
99711 ACATTGATGTTTTGGTTTCGCAAGAAACGCTTTTTTCCCATCAATTTCTGTAAATTCTATGTTCG
259 ATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCG
* * *
99776 TGGCTCAAATGAGACAAACATGGATTCTACTAAGGTTCTTCATTCATTTCGTGATTAGGCACTAT
324 TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTAT
* * * * * *
99841 AAACATATTCTTCTCATTAGGACAAATGATACTT-AAGGTTTTTTTTTGCATGAAAATCTTTTCT
389 AAACACATTCTCCTCATTAGGATAAATGATA-TTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
99905 TTGCCTTATTTTCCTTAAAATCA
453 TTGCCTTATTTTCCTTAAAATCA
* *
99928 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCAATCTTTTCAAGATTGG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTTT-AAGATTGG
* * * *
99993 GAACCAAAAACACATTTCTTTCATTAGGAGACATGACATTGATGCTTTGGTATCGCAAGAGAAGC
65 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* *
100058 TTGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
130 TTGTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* * *
100123 ATACTAA-T-CCATAATCTTTT-ATAGATTAGGCACCGTAAAAATAGTCTTCTCATAAGGATACA
195 ATACTAATTCCCAT--TCTTTTCA-GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACA
* * * *
100185 GGATATTGATGATTTGGTTTTGCAAGAAATGCTTTTTTCCCACCAATTTTTGAAAATTTTAAGTT
257 GGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTT
* * * *
100250 CTTG-C-C-AATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATGTCATGATTAGGCGCT
322 CGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT
* * * *
100312 ATAAACACATTCTCCTCATTAGGATAAATAATATTTATGGTTTTCTTTTGCAAGGAAATCTTTTG
387 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
100377 TTTGCCTTATTTTCCTTAAAATCA
452 TTTGCCTTATTTTCCTTAAAATCA
* * *
100401 AAGTTTGTACTTTAAATGAGACATGCATTGAATCTTGTAAAAGTCTCCAATCTTTTCAAGATTAG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTTT-AAGATTGG
* * * *
100466 GATCCAAAAACACATT-CTTTGCATTAGGATACATGACATTGATGCTTTGGTGTCCCAAAAGAAG
65 GAACCAAAAACACATTCCCTT-CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * *
100530 CTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTCATCTCTTAAATAAGATAAACATTAATACT
129 CTTGTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* ** * *
100595 CATGCTAAAACCCATTCTTTTCAGGATTAGGCACCATAAACACAGTCTTCTCATAAGGATACTGG
194 CATACTAATTCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGG
* ** * *
100660 ATATTGATGATTTGGTTTAGCTTGAAGCAG-ATTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
259 ATATTGATGATTTGGTTTCGCAAGAAAC-GCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
* * *
100724 GTGCCTCAAATGAGATAAACATGAATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTA
323 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
** * *
100789 TAAGTACATTCTCCTC-TTCAGGATATATGATATTGATGGTTTTCTTTTGCATGGAAGTCTTTTC
388 TAAACACATTCTCCTCATT-AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* *
100853 TTCGCCTTATTTCCCTTAAAATCA
452 TTTGCCTTATTTTCCTTAAAATCA
* * *
100877 AATTTTGTACTTTAAATGAGACAAGCATTGATTCATGTAAAAGTCTCCATTCTTTCTAAGATTGG
1 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTT-TAAGATTGG
* **
100942 GAACCAAAAGCACATTCTTTTCATTAGGATA
65 GAACCAAAAACACATTCCCTTCATTAGGATA
100973 TGATGACAAC
Statistics
Matches: 2977, Mismatches: 381, Indels: 105
0.86 0.11 0.03
Matches are distributed among these distances:
464 4 0.00
465 96 0.03
466 308 0.10
467 5 0.00
471 1 0.00
472 6 0.00
473 417 0.14
474 687 0.23
475 377 0.13
476 1065 0.36
477 11 0.00
ACGTcount: A:0.31, C:0.17, G:0.15, T:0.36
Consensus pattern (475 bp):
AAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTTTAAGATTGGG
AACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCT
TGTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCA
TACTAATTCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGAT
ATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTG
CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
CCTTATTTTCCTTAAAATCA
Found at i:105833 original size:42 final size:42
Alignment explanation
Indices: 105777--105895 Score: 184
Period size: 42 Copynumber: 2.8 Consensus size: 42
105767 TTCTTCTCTC
* * *
105777 CTCCTTCTGTCATCCCTCCTCTCTCTATTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
*
105819 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
* *
105861 CTCCTCCTATCATCCCTCCTCTCTCTTCTTTCTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCT
105896 TTGAGGGCTA
Statistics
Matches: 70, Mismatches: 7, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
42 70 1.00
ACGTcount: A:0.08, C:0.45, G:0.03, T:0.44
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
Found at i:105836 original size:12 final size:11
Alignment explanation
Indices: 105810--105885 Score: 52
Period size: 12 Copynumber: 6.9 Consensus size: 11
105800 TCTATTATCT
*
105810 CTCCTGTCTCTC
1 CTCCTATCTC-C
105822 CTCCTATCATCC
1 CTCCTATC-TCC
105834 CTCCTATCT--
1 CTCCTATCTCC
*
105843 CTACTATCT--
1 CTCCTATCTCC
*
105852 CTCCTGTCTCTC
1 CTCCTATCTC-C
105864 CTCCTATCATCC
1 CTCCTATC-TCC
*
105876 CTCCTCTCTC
1 CTCCTATCTC
105886 TTCTTTCTCT
Statistics
Matches: 53, Mismatches: 6, Indels: 11
0.76 0.09 0.16
Matches are distributed among these distances:
9 15 0.28
11 3 0.06
12 31 0.58
13 4 0.08
ACGTcount: A:0.09, C:0.49, G:0.03, T:0.39
Consensus pattern (11 bp):
CTCCTATCTCC
Found at i:105837 original size:24 final size:24
Alignment explanation
Indices: 105801--105886 Score: 85
Period size: 24 Copynumber: 3.8 Consensus size: 24
105791 CCTCCTCTCT
* *
105801 CTATTATCTCTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
* *
105825 CTATCATCCCTCC--TATCT-CTA
1 CTATCATCCCTCCTGTCTCTCCTC
105846 CTATC-T--CTCCTGTCTCTCCTC
1 CTATCATCCCTCCTGTCTCTCCTC
*
105867 CTATCATCCCTCCTCTCTCT
1 CTATCATCCCTCCTGTCTCT
105887 TCTTTCTCTT
Statistics
Matches: 49, Mismatches: 7, Indels: 12
0.72 0.10 0.18
Matches are distributed among these distances:
18 4 0.08
20 5 0.10
21 14 0.29
22 5 0.10
24 21 0.43
ACGTcount: A:0.10, C:0.45, G:0.02, T:0.42
Consensus pattern (24 bp):
CTATCATCCCTCCTGTCTCTCCTC
Found at i:105861 original size:18 final size:18
Alignment explanation
Indices: 105792--105862 Score: 52
Period size: 18 Copynumber: 3.6 Consensus size: 18
105782 TCTGTCATCC
* *
105792 CTCCTCTCTCTATTATCT
1 CTCCTGTCTCTACTATCT
*
105810 CTCCTGTCTCTCCTCCTATCAT
1 CTCCTG--TCT-CTACTATC-T
*
105832 CCCTCCTATCTCTACTATCT
1 --CTCCTGTCTCTACTATCT
105852 CTCCTGTCTCT
1 CTCCTGTCTCT
105863 CCTCCTATCA
Statistics
Matches: 41, Mismatches: 6, Indels: 12
0.69 0.10 0.20
Matches are distributed among these distances:
18 15 0.37
20 4 0.10
21 13 0.32
22 4 0.10
24 5 0.12
ACGTcount: A:0.10, C:0.44, G:0.03, T:0.44
Consensus pattern (18 bp):
CTCCTGTCTCTACTATCT
Found at i:106670 original size:22 final size:24
Alignment explanation
Indices: 106636--106679 Score: 74
Period size: 22 Copynumber: 1.9 Consensus size: 24
106626 TACTGGTTTT
106636 TTTTTTCTCTTTTTGTATTCTTTC
1 TTTTTTCTCTTTTTGTATTCTTTC
106660 TTTTTT-T-TTTTTGTATTCTT
1 TTTTTTCTCTTTTTGTATTCTT
106680 GAAAAAAAAA
Statistics
Matches: 20, Mismatches: 0, Indels: 2
0.91 0.00 0.09
Matches are distributed among these distances:
22 13 0.65
23 1 0.05
24 6 0.30
ACGTcount: A:0.05, C:0.11, G:0.05, T:0.80
Consensus pattern (24 bp):
TTTTTTCTCTTTTTGTATTCTTTC
Found at i:109446 original size:476 final size:476
Alignment explanation
Indices: 107505--140313 Score: 39859
Period size: 476 Copynumber: 69.1 Consensus size: 476
107495 CTTCCTTGGT
*
107505 TTTCATCAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTT-TTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* *
107569 TGATAGAATCAAAGTTTGTCTGTTAAATAAGACAAACATGAATACTCATACTAATCCATCA-TCT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCC-CCATTCT
* ** *
107633 TTTCTGGATTAGGCACTGTAAA-ATTA-CCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
130 TTTCTAGATTAGGCACCATAAACA-TAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
* * *
107696 TTGCAAGAAATGCTTTTTTCCCACC-AATTTTTGTAAATTTTAAGTTCATG-C-C-AATGAGACA
194 TCGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACA
* * * * * * * * *
107757 AACAAGAATTCTAGTAAGGATCTTCTTTCATTCCGGGATTAAGCACTATAAATACAATCTCCTCA
258 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTA
** * * * ** *
107822 ACAGGATATATGATATTGATAGTTTTTTTTTGCATTAAAATCTTTTCTTTTCCTTATTTTCCTTA
323 TTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTA
* * * * *
107887 AAAACAAAGTTTGTACTTTAAATGAGACATGCATCGATGCTTGTAAAAGTCTCCATTCTTTTTAA
388 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
107952 GATTGGGAACCAAAAACACATTCC
453 GATTGGGAACCAAAAACACATTCC
* * *
107976 TTTCATTAGGATACATGACATT-AGTGCCTTGGCGTCGCAAGAGAAGCTTGTCTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGA-TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA
** * * **
108040 TTGATAGAATCATGGTTTGTCTCTTAAATAAGACAAACGTGAATATTCATACTAATCTACATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* ** * * * *
108105 TTTCTAGATTAGCCACTGTAAAAATAGTCTTCTCATAAAGATACAAGATATTGATGATTTGGCTT
130 TTTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* ** * * *
108170 CGGAAGAAACTATTTTATCCCACC-AA-TTTGGTAAATTCTAAGTTCGTGCCTCAAATGAGACAA
195 CGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
** *
108233 ACATAAATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTTTCCTTAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * *
108298 TAGGTTACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTCCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
*
108363 AATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* *
108428 ATTGAGAACCAAAAACAAATTCC
454 ATTGGGAACCAAAAACACATTCC
* * *
108451 TTTCATTAGGATACATGACATT-AGTGCTTTGGCGTCGCATGAGAAGCTTGTCTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGA-TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA
* * * * **
108515 TTGATAGAATCAAGGTTTGTCTCTTAAATAAGACAAACGTGAATATTCAAACTAATCTACATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * * * *
108580 TTTCTAGATTAGCCACCGTAAAAATAGTCTTCTCATAAAGATACAGGATATTGATGATTTGGCTT
130 TTTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* ** * *
108645 CGGAAGAAACTATTTTTTCCCACC-AATTTTTGTAAATTTTAAGTTCGTG-C-C-AATGAGACAA
195 CGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * * * * * * *
108706 ACAAGAATTCTAGTAAGGATCTTCTTTC-TTTCCGGGATTAAGCACTATAAATACAATCTCCTCA
259 ACATGGATTCTAGTAAGGATCTTCATTCATTT-CGTGATTAGGCACTATAAACACATTCTCCTTA
* * * * **
108770 TCAGGATATATGGTATTGATAGTTTTCTTTTGCATTAAAATCTTTTCTTTGCCTTATTTTCCTTA
323 TTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTA
** *
108835 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTTATAAAAGTCTCCATTCTTTTTAA
388 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
108900 GATTGGGAACCAAAAACACATTCC
453 GATTGGGAACCAAAAACACATTCC
* * * * *
108924 TTTCATTCGGATACAAGACATT-ACTGCCTTGGCGTCGCAAGAGAAGCTTGTCTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGA-TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA
* * * **
108988 TTGATAGAATCAAGGTTTGTCTCTTAAATAAGACAAACGTGAATATTCATACTAATCTACATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * * * *
109053 TTTCTAGATTAGCCACCGTAAAAATAGTCTTCTCATAAAGATACAGGATATTGATGATTTGGCTT
130 TTTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* ** * * *
109118 CGGAAGAAACTATTTTTTCCCCCTAATTTTTGTAGATTCTATGTTCATGCCTCAAATGAGAAAAA
195 CGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* *
109183 CATGGATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAAT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATT
109248 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
325 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
* *
109313 ATCAATGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
390 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
** *
109378 TTAAGAACCAAAAACAAATTCC
455 TTGGGAACCAAAAACACATTCC
* *
109400 TTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAGAGAAGCCTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* *
109465 TAATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-AATACTCATACTAATCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * * * *
109529 TTTTGGATTAGGCACCATAAACATAG---TCTAATAGGGATACACGATAATGATGCTTTGGATTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
**** * * * * *
109591 GCAAGAAACGCTTCCCCCCCTCCCAATTTTTGT-AATGTATAAGTTCATTCCTCGAATGAGACAG
196 GCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAAT-TCTAAGTTCATGCCTCAAATGAGACAA
* * * *
109655 ACATGGATTCTAGTAAGGGTCTTCTTTCATTTCGGGATTAGGCA-TAATAAACACTTTCTCCTCT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT-ATAAACACATTCTCCT-T
* * * * *
109719 -TTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAATATTTTCTTTGCCTCATTTTCCCT
322 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTT
* * * * * * * *
109783 AAAATCAAAGTTTGCATTTTAATTGAGACAAGCATTGATTCTCGTAAAGGTCTCGACTCTTTCCA
387 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* * *
109848 AGATTAGGATCCAAAAACACTTTCC
452 AGATTGGGAACCAAAAACACATTCC
* * * * * *
109873 CTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGTAAGAGAAGCTTTTTTTTCCACCGTTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* *
109938 TGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCTATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* *
110003 TTC-AGGATTACGCTCCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTA
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT-
** * * * *
110067 T-GCAAGAAACGCTTTTTT-CCAATCAATTTCTATAAATTCTATGTTCGTGCCTCAAATGAGACA
194 TCGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACA
* * * * *
110130 AACATAGATTCTAGTAAGAATCTTCATTCATTTCGTGATTAGGCACAATAAACACAATCTCCTTG
258 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTA
* * * *
110195 TCACGATACATGATATTGATGGTTTTCTTTTGCAT-GAAATCTTTTCTTTGTCTTATTTTCCTTA
323 TTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTA
*
110259 AAATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
388 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* *
110324 GATTGAGAACCAAAAACAAATTCC
453 GATTGGGAACCAAAAACACATTCC
* * *
110348 TTTCATTA-GAGTACATGACATTGATGCTTTGGTCTCGCAAGAGAAGCCTTTCTTTCCATCGTTA
1 TTTCATTAGGA-TACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA
* *
110412 TTAATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-AATACTCATACTAATCCACATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * * * * * * *
110476 TTTTTGGATTAGGCACCATAAACATAG---TCTAATAGGGATACATGATAATGATGCTTTGGATT
130 TTTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
**** * * *
110538 CGCAAGAAACGCTTCCCCCCCCCCCCCCCAATTTTTGT-AATGTATAAGTTCATTCCTCAAATGA
195 CGCAAGAAACGCTT-----TTTTCCCCCTAATTTTTGTAAAT-TCTAAGTTCATGCCTCAAATGA
* * * * *
110602 GACAGACATGGATTCTAGTAAGGATCTTCTTTCATTTCGGGATTAGGCATTATAAACACTTTCTC
254 GACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTC
* * * * * *
110667 CTCATTAGGATAAATGATATTAATTGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCTCA-TTTC
319 CTTATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTC
* * * * * * * * *
110731 CTTAAAATCAAATTTTTTATTTTAATTAAGACATGCATTGATTCTTGTAAAAGCCTTCACTCTTT
384 CTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTT
* * * *
110796 CCAAGATTAGGATCCAAAAACACTTTTCC
449 TCAAGATTGGGAACCAAAAACAC-ATTCC
* * * *
110825 -TTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAGAAGCTTTTTTTTCCACCGTTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * **
110889 TGATAAAATCAATGTTTGTCTCTTAAATAAGACAAACATGAATACTCATTTTAATCCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * *
110954 TTC-AGGATTGGGCACCATAAACATAGTCCTCACATAAGGATACAGGATATTGATGATTTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * *
111018 CGCAAGAAACGCTTTTTT-CCCATCAATTTCTATAAATTCTATGTTCATGCCTCAAATGAGACAA
195 CGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * * * *
111082 ACATGGATTCTAGTAAGGATCTTCATTCATTCCGGGATTAAGCACTATAAACACAATCTCCTTGT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * * * *
111147 CACGATACATGATATTGATGGATTTCTTTTGCATGGAAATCTTTTGTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* *
111212 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGAATCTCGTAAAAGTCTCCAATCTTTTCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* *
111277 ATTAGGATCCAAAAACACATT-C
454 ATTGGGAACCAAAAACACATTCC
* *
111299 TCTGCATTAGGATACATGACATTGATGCTTTGGTGTCCCAAGAGAAGCTTTTCTTTCCACCGTTA
1 T-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA
* * ** * **
111364 ATGATAAAATCAAAGTTCATCTCTTAAATAAGACAAACATGAATACTCATGCTAAAACCCATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* *
111429 TTTC-AGGATTAGGCACCATAAACACAGTCTTCTCATAAGGATACTGGATATTGATGATTTGGTT
130 TTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
* * * * * **
111493 TAGCTAGAAGCAG-ATTCTTCCCACC-AATTTTTGTAAATTCTAAGTTCGCGCCTCAAATGAGAC
194 TCGCAAGAAAC-GCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGAC
* * *
111556 AAACATGAATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACTATAAATACATTCTCCTC
257 AAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-
* * * * * *
111621 T-TCAGGATATATGATATTGATGGTTTTCTTTTGCGTGGAAGTCTTTTCTTCGCCTTATTTCCCT
321 TATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
* * *
111685 TAAAATCAAATTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTTTT
386 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
*
111750 AAGATTGGGAACCAAAAACACATTCT
451 AAGATTGGGAACCAAAAACACATTCC
* *
111776 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * ** *
111841 TGATAGAATCAAAGTTTGTTTGTTAAATAAGACAAACATGAATACTCATACTAATCCATAATCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* ** * ** * *
111906 TTCTGGATTAGGCACTGTAAAAATAACCTTCTCATAAGGATACAGGATATTAATGATTTGGTTTT
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * *
111971 GCAAGAAATGCTTTTTTCCCACC-AATTTTTGTAAATTTTAAGTTCGTG-C-C-AATGAGACAAA
196 GCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* * * * * * * *
112032 CAAGAATTCTAGTAAGGATCTTCTTTC-TTTCCGGGATTAAGCACTATAAATACAATCTCCTCAT
260 CATGGATTCTAGTAAGGATCTTCATTCATTT-CGTGATTAGGCACTATAAACACATTCTCCTTAT
* * * * * **
112096 CAGGATATATGGTATTGATAGTTTTATTTTGCATTAAAATCTTTTCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* ** *
112161 AATCAAAGTTTGTACTTTAAATGAGACATGCATCGATTCTTATAAAAGTCTCCATTCTTTTTAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
112226 ATTGGGAACCAAAAACACATTCC
454 ATTGGGAACCAAAAACACATTCC
* * * * *
112249 TTTCATTCGGATACAAGACATT-ACTGCCTTGGCGTCGCAAGAGAAGCTTGTCTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGA-TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA
* ** * **
112313 TTGATAGAATCAAGGTTTGTCTCTTAAATAAGACAAACGCGAATATTCATACTAATCTACATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * * * * *
112378 TTTCTAGATTAGCCACCGTAAAAATAGTCTTCTCATAAAGATATAGGATATTGATGATTTGGCTT
130 TTTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* ** * * *
112443 CGGAAGAAACTATTTTTTCCCACC-AA-TTTGGTAAATTCTAAGTTCGTGCCTCAAATGAGACAG
195 CGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* ** * * *
112506 ACGTAAATTCTAGTAAGGATCTTCATTAATTTCGTGATTAGGCACTATAAACACATTTTCCTCAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* *
112571 TAGGTTACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* *
112636 AATCAAATTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* *
112701 ATTGAGAACCAAAAACAAATTCC
454 ATTGGGAACCAAAAACACATTCC
* *
112724 TTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAGAGAAGCCTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * *
112789 TAATAGAATCAAAGTTTGTCTTTTAAATAAGACAAACAT-AATACTCATACTAATCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * * * * * *
112853 TTTTGGATTAGGCACCATAAACATAG---TCTAATAGGGACACATGATAATGATGCTTTTGATTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
**** * * *
112915 GCAAGAAACGCTTCCCCCCCCCCCCCCAATTTTTGT-AATGTATAAGTTCATTCCTCAAATGAGA
196 GCAAGAAACGCTT----TTTTCCCCCTAATTTTTGTAAAT-TCTAAGTTCATGCCTCAAATGAGA
* * * * * *
112979 CAGACATTGATTCTAGTAAGGATCTTCTTTCATTTCGGGATTAGGCATTATAAACACTTTCTCCT
256 CAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
* * *
113044 CT-TTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTCATTTTCC
321 -TATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCC
* * * * * * * *
113108 CTAAAATCAAAGTTTGCATTTTAATTGAGACAAGCATTGATTCTCGTAAAGGTCTCCACTCTTTC
385 TTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT
* * *
113173 CAAGATTAGGATCCAAAAACACTTTCC
450 CAAGATTGGGAACCAAAAACACATTCC
* * * *
113200 CTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTTTTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC-TTTTCTTTCCACCGTTA
* * * * * * *
113265 ATGATAAAATCAAAGTTTGTCACTTAAATAAGACAAACATGAATGCTCATACTAATCTCAATTTT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* *
113330 TTTC-AGCATTACGCTCCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
130 TTTCTAG-ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
* * * * * * *
113394 AT-GCAATAAACGATTTTTT-CCCATCAATTTCTATAAATTCTATGTTCGTGCCTCAAATGAGAC
194 -TCGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGAC
* * * *
113457 AAACATAGATTCTAGTAAGAATCTTCATTCATTTCGTGATTAGGCACAATAAACACAATCTCCTT
257 AAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTT
* * * * *
113522 GTCACGATACATGATATTGATGGTTTTCTTTTGCAT-GAAATCTTTTCTTTGTCTTATTTTCCTT
322 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTT
*
113586 AAAATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
387 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* *
113651 AGATTGAGAACCAAAAACAAATTCC
452 AGATTGGGAACCAAAAACACATTCC
* * * *
113676 TTTCATTA-GAGTACATAACATTGATGCTTTGGTCTCGCAAGAGAAGCCTTTCTTTCCATCGTTA
1 TTTCATTAGGA-TACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA
* * *
113740 TTAATAGAATCAAAGTTTGTCTTTTAAATAAGACAAACAT-AATACTCATACTAATCCACATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * * * * * * * *
113804 TTTTTGGATTAGGCACCATAAACATAG---TCTAATAGGGACACATGATAATGATGCTTTGGATT
130 TTTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
**** * * *
113866 CGCAAGAAACGCTTCCCCCCCCCCCCCCAATTTTTGT-AATGTATAAGTTCATTCCTCAAATGAG
195 CGCAAGAAACGCTT----TTTTCCCCCTAATTTTTGTAAAT-TCTAAGTTCATGCCTCAAATGAG
* * * * *
113930 ACAGACATTGATTCTAGTAAGGATCTTCTTTCATTTCGGGATTAGGCACTATAAACACATTTTCC
255 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC
* * *
113995 TCATTAGGTTACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCC
320 TTATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCC
* *
114060 TTAAAATCAAATTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT
385 TTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT
* *
114125 CAAGATTGAGAACCAAAAACAAATTCC
450 CAAGATTGGGAACCAAAAACACATTCC
* *
114152 TTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAGAGAAGCCTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * *
114217 TAATAGAATCAAAGTTTGTCTTTTAAATAAGACAAACAT-AATACTCATACTAATCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * * * * * * *
114281 TTTTGGATCAGGCACCATAAACATAG---TCTAATAGGGACACATGATAATGATGCTTTTGATTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
**** * * * *
114343 GCAAGAAACGCTTCCCCCCCCCCCCCCCAATTTTTGT-ATTGTATAAGTTCATTCCTCAAATGAG
196 GCAAGAAACGCTT-----TTTTCCCCCTAATTTTTGTAAAT-TCTAAGTTCATGCCTCAAATGAG
* * * * * *
114407 ACAGACATTGATTCTAGTAAGGATCTTCTTTCATTTCGGGATTAGGCATTATAAACACTTTCTCC
255 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC
* * *
114472 TCT-TTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTCATTTTC
320 T-TATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTC
* * * * * * *
114536 CCTAAAATCAAAGTTTGCATTTTAATTGAGACAAGCATTGATTCTCGTAAAGGTCTCCACTCTTT
384 CTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTT
* * * *
114601 CCAAGATTAGGATCCAAAAACACTTTCC
449 TCAAGATTGGGAACCAAAAACACATTCC
* * * *
114629 CTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTTTTTTTCCACCGTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC--TTTTCTTTCCACCGTT
* * * * * *
114694 AATGATAAAATCAAAGTTTGTCACTTAAATAAGACAAACATGAATGCTCATACTAATCCCAATTT
64 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTC
* * *
114759 TTTTC-AGCATTACGCTCCATAAACATAGTCTTCTCATAAGGATATAGGATATTGATGATTTGGT
129 TTTTCTAG-ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGT
* * * * * * *
114823 TAT-GCAATAAACGATTTTTT-CCCATCAATTTCTATAAATTCTATGTTCGTGCCTCAAATGAGA
193 T-TCGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGA
* * * * *
114886 CAAACATAGATTCTAGTAAGAATCTTCATTCATTTCGTGATTAGGCACAATAAACACAATATCCT
256 CAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
* * * * *
114951 TGTCACGATACATGATATTGATGGTTTTCTTTTGCAT-GAAATCTTTTCTTTGTCTTATTTTCCT
321 TATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
*
115015 TAAAATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
386 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* * *
115080 AAGATTGAGAACCAAAAACAAATTTC
451 AAGATTGGGAACCAAAAACACATTCC
* * * * * *
115106 GTCCATTAGGATACATGACGTTGATGCTTTGGTCTCGTAAGAGAAGCCTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * * * * **
115171 TAATAGAATCAAAGTTTATCTATTAAATATGATAAACATAAATACTCATACTAATCCATATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * ** * *
115236 TTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATAACGATGCTTTGGATTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * ** *
115301 ACAAGAAACGC-TTTTTCGCCCC-AATTTTTGT-AATGTATAAGTTCATTTCTCAAATGAGACAG
196 GCAAGAAACGCTTTTTTC-CCCCTAATTTTTGTAAAT-TCTAAGTTCATGCCTCAAATGAGACAA
* * * * * * *
115363 ACATGGATTCTAGTAAGAATCTTCTTTCATTTCGGGATTAGGCATTATAAAAACTTTCTCCTCAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * * *
115428 TAGGATAAATGATATTAATTGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTCA-TTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * * * * * * *
115492 AATCAAATTTTTTATTTTAATTAAGACATGCATTGATTCTCGTAAAAGTCTTCACTCTTTCCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
115557 ATTAGGATCCAAAAACACTTTTCC
454 ATTGGGAACCAAAAACAC-ATTCC
* * *
115581 -TTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAGAAGC-TTT-TTTCCACCGTTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * *
115643 TGATAAAATTAATGTTTGTCTCGTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * *
115708 TTC-AGGATTGGGCACCATAAACATAGTCCTCACATAAGGATACAGGATATTGATGATTTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * * * * *
115772 CGCAAGAAACGCTTTTTT-CCCATCAATTTCTATAAATTCTATGTTCATGCCACAAGTGACACAA
195 CGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * *
115836 ACATGGATCCTAGTAAGGATCTTCATTCATTTCGTGATTAAGCACTATAAACACAATCTCCTTAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * * * *
115901 CACGATACATTATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * *
115966 AATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTTGTAAAAGTCTCCAATTGTTTT-AA
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCC-ATTCTTTTCAA
116030 GATTGGGAACCAAAAACACATTCC
453 GATTGGGAACCAAAAACACATTCC
* * * * **
116054 CTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACTATTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * * * *
116119 TGATAGAATCAAAGTTTGCCTCATAAATAAGACAAACTTGAATACTTATGCTAATCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
** * * *
116184 TTCCGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATGATATTGATGCTTTGGTTTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * * * *
116249 GCAAGAAACGCTTTCTTCCCCCCAATTTTTGTAAAGTATAAGTTCATTCCTCATATTAGACAAAC
196 GCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAAC
* *
116314 ATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACAGATTCTCCTCATTA
261 ATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATTA
* * *
116379 GGATAAATGATATTGATGGTTTTCTTTTGGATGAAAATCTTTTCTTTGCCTTATTTTCTTTAAAA
326 GGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAA
* *
116444 TCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGAT
391 TCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGAT
* * *
116509 TAGGATCCAAAAACACTTTCC
456 TGGGAACCAAAAACACATTCC
* * * * * * * *
116530 CTTCATTAGGATAAATGACATTGAGGCTTTGGTGTTGCAAGAAAAGCTTTTTTTTCCACCGATAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * *
116595 TGATAAAAT-AAAGTTTGTCTCTTAAATAAGACAAACATGAATACACATACTAATTCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * *
116659 TTC-AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAAAGGTTATTGATGATTTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * *
116723 C-CTAGGAAATGCTTTTTTCGCCCTAATTTTTGTAAATTCTATGTTCATGCCTCAAATGAGACAA
195 CGC-AAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * *
116787 ACATGGATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGTACTATAAACACATTCTCCTTAA
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* *
116852 TAGGATAAATGATATTGATGGTTTTCTTTTGCGTGAAAATCTTTTCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
*
116917 AATCAAAGTTTGTA-TTCTAAATGAGACATGCATTGATTCTCGTAAATGTCTCCATTCTTTTCAA
389 AATCAAAGTTTGTACTT-TAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * *
116981 GCTTGAGAACTAAAAACACATTCC
453 GATTGGGAACCAAAAACACATTCC
* * * *
117005 TTTCATT-GGAATACATGACATTGGTGCTTTGGTGTCACATGAGAAGCTTGTCTTTCCACCGTTA
1 TTTCATTAGG-ATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA
* * * * *
117069 TTGATAGAATCAAAATTTGTCTCTTAATTAAGACAAACATGAATATTCATACCAATCCACATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * * *
117134 TTTCTGGATTAGGCACCATAAAAATAGTCTTCTCATAAAGATACAGGATATTGCTGATTTGGCTT
130 TTTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGG-TT
* * *
117199 T-GCAAGAAACTCTTTTTTCCCAGC-AATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACA
194 TCGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACA
* * * * * *
117262 GACATGGATTCTAGTAAGGATCTTCATTCATTTCATAATTGGGAACTATAAACACATTCTCCTCA
258 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTA
* * * *
117327 TTCA-GATACATGATATTGATGGTTTTCTTTTGCCTGGAAATCATTTCTTTGCATTATTTTCCTT
323 TT-AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTT
**
117391 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTCCCA
387 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
*
117456 AGATTGGGAACTAAAAACACATTACC
452 AGATTGGGAACCAAAAACACATT-CC
* * * *
117482 -TTCATTAGGATACATGACATTGATGTTTTGGTATCGTAAGAGAAGCTTTTCTTTCCACCGTTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * *
117546 TGATAAAATCAAAGTTTATCTCCTAAATAAGACTAACATGAATACTCATACTAATCCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * *
117611 TTCAAGATTAGGCACCGTAAACATAGTCTTCTCATAAGGATACATGATATTAATGATTTGGTTTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
** * * * *
117676 GCAAGAAACGAC-TTTTT-CCTATCAATTTTTGTAAATTCTATGTTCGTGGCTCAATTGAGACAA
196 GCAAGAAACG-CTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * * * * *
117739 ACATGGATTCTACTAAGGAGCTTCATTCATTTCGTGATTAGACACTATAAACATATTCTGCTCAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* *
117804 TAGGATAAATGATATTTATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * * *
117869 AATCAAAGTTT-TACTTTAAATGAGACATGGATTGAGTCTCGTAAAAGTCTCCAATCTTTTCAAA
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
*
117933 ATTGGGAACCAAAAACACATTTC
454 ATTGGGAACCAAAAACACATTCC
* * *
117956 TTTCATTAGGATACATGACATTGATGCTTTGGGGTCGCAAGAGAAGCTTTTCTTTCTACCATTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* ** * *
118021 GGACGGAATCAAAGTTTGTCACTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTGTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * *
118086 TT-TAGGATTAGGCACCATAAACACAGTCTTCTCATAAAGATACAAGATATTGATGCTTTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * * * * *
118150 CACAAGAAACACTTTCTTCCCACC-AATTTTTGTAAATTCTAAGTTCGTGCGTCCAATGAGACAG
195 CGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* *
118214 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACAGATTCTCCTCAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * *
118279 TAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTACTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* *
118344 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
118409 ATT-CGATCCAAAAACAC-TTTC
454 ATTGGGAACCAAAAACACATTCC
* * *
118430 TCTTCATTAGGATAAATGACATTGATGCTTTGGTG-CTGCAAGAGAAGCTTTTTTTTTCACCGTT
1 T-TTCATTAGGATACATGACATTGATGCTTTGGTGTC-GCAAGAGAAGCTTTTCTTTCCACCGTT
** * * *
118494 AAGGATAAAATCAAGGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATTCCCATTC
64 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTC
* *
118559 TTTTCAAGATTAGGCACGATAAACATAGTCTTCTCATAAGGATAAAGGATTCTTCTCATAAGGAT
129 TTTTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGAT-----A-------C--------
* * *
118624 AAAGGATATTCATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCCCTAATTTTTGTAAATTCTAT
174 --AGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAA
* * * * *
118689 GTTCATGCCTCAAATAAGACAAACATGAATTATAGTAAGGATCTGCATTCATTTCATGATTAGGC
237 GTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGC
* * * * *
118754 ACTATAAACACATTCTCCTTAATATGTTAAAAGATATTGATGGTTTTCTTTTGCATGGAAATCAT
302 ACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTT
* * *
118819 TTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTATATTTTAAATGAGACATGCATTGATTCGCGT
367 TTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGT
* *
118884 AAAAGTCTCCATTCTTTTCAAGATTGAGACCCAAAAACACATTCC
432 AAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCC
* * * *
118929 TTTCATTAGAATACATGACATTGATACTTTGGTCTCGCAAGAGAAGCTTTTGTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* *
118994 TAATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * * *
119059 TTTTGGATTAGGCACCATAAACATAGTCTTCTCATAGGGATACATGATAATGATGCTTTGGATTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * ** * *
119124 GCTAGAAACAC-TTTTTCGCCCC-AATTTTTGT-AATGTATAAGTTCATTTCTCAAATGAGGCAG
196 GCAAGAAACGCTTTTTTC-CCCCTAATTTTTGTAAAT-TCTAAGTTCATGCCTCAAATGAGACAA
* * * * * *
119186 ACATGGATTCTAGTGAGGATCTTC-TGTCACTTCGGGATTAGGCATTATAAACACTTTCTCCTCA
259 ACATGGATTCTAGTAAGGATCTTCAT-TCATTTCGTGATTAGGCACTATAAACACATTCTCCTTA
* * * * *
119250 TTAGGATAAATGATATTAATTGTTTTCTTTTGCCTAGAAATCTTTTCTTTGCCTCA-TTTCCTTA
323 TTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTA
* * * * * * * *
119314 AAATCAAATTTTTTATTTTAATTAAGACATGCATTGATTCTCGTAAAAGTCTTCACTCTTTCCAA
388 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * *
119379 GATTAGGATCCAAAAACACTTTTCC
453 GATTGGGAACCAAAAACAC-ATTCC
* * * *
119404 -TTCATTAGGATACATGACATTGATGCTTTGGTGTTGTAAGAGAAGCTTTTTTTTCCACCGTTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* *
119468 TGATAAAATCAATGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * *
119533 TTC-AGGATTGGGCACCATAAACATAGTCCTCACATAAGGATACAGGATATTGATGATTTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * *
119597 CGCAAGAAACGCTTTTTT-CCCATCAATTTCTGTAAATTCTATGTTCATGCCTCAAATGAGACAA
195 CGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * * * *
119661 ACATTGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAAGCACTATAAACACAATCTCCTTGT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * * *
119726 CACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCATTTCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* *
119791 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATT-TGTTTGAA
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCT-TTTCAA
119855 GATTGGGAACCAAAAACACATTCC
453 GATTGGGAACCAAAAACACATTCC
* * * * * *
119879 CTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCGCTGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * *
119944 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTTATCCTAATCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * *
120009 TTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATGATATTGATGCTTTGGTTTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * * ** *
120074 GCAAGAAACGCTTTCTTCCCCCCAATTTTTGTAAAGTATAAGTTCATTCCTCATTTTAGACAAAC
196 GCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAAC
* * *
120139 ATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGGACTATAAACAGATTCTCCTCATTA
261 ATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATTA
* * *
120204 GGATAAATGATATTGATGGTTTTCTTTTGGATGAAAATCTTTTCTTTGCCTTATTTTACTTAAAA
326 GGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAA
* *
120269 TCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGAT
391 TCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGAT
* * *
120334 TAGGATCCAAAAACACTTTCC
456 TGGGAACCAAAAACACATTCC
* * * * * * * *
120355 CTTCATTAGGATAAATGACATTGAGGCTTTGGTGTTGCAAGAAAAGCTTTTTTTTCCACCGATAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * *
120420 TGATAAAAT-AAAGTATGTCTCTTAAATAAGACAAACATTAATACTCATACTAATTCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * *
120484 TTC-AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAAAGGTTATTGATGATTTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * * *
120548 CGTAGGAAATGCTTTTTTCCCCCTAATTATTGTAAATTCTATGTTCATGCCTCAAATGAGACAAA
195 CGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* * **
120613 CATGGATTCTTGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAAGTACATTCTCCTCT-T
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-TAT
* * **
120677 CAGGATATATGATATTGATGGTTTTCTTTTGCGCGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * *
120742 AATCAAAGTTTGTATTTTAAGTGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTGCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* *
120807 CTTGAGAACCAAAAACACATTCC
454 ATTGGGAACCAAAAACACATTCC
* * *
120830 TTTCATTGGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTGTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * * *
120895 TGATAGAATCAAAATTTGTCTCTTAATTAAGACAAACATGAATATTCATACCAATCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * *
120960 TTCTGGATTAGGCACCGTAAAAATAGTCTTCTCATAAAGATACAGGATATTGCTGATTTGGCTTT
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGG-TTT
* * * *
121025 -GCAAGAAACTCTTTTTTCCCAAC-AATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAG
195 CGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * *
121088 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTAATTGGGCACTATAAACACATTCTCCTCAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * * * *
121153 TCGGATACATGATATTGATGGTTTTCTTTTGCCTGGAAATCATTTCTTTGCATTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
*
121218 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
*
121283 ATTGGGAACTAAAAACACATTACC
454 ATTGGGAACCAAAAACACATT-CC
* * *
121307 -TTCATTAGGATACATGACATTGATGCTTTGGTATCGTAAGAGAAGCTTTTCTTTCCACCGTTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* *
121371 TGATA-AATTCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATTCCCATTCT
66 TGATAGAA-TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * *
121435 TTTC-AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAAAGGTTATTGATGATTTGGTT
130 TTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
* * * * * * *
121499 TCGTAGGAAATGCTTTTTTCCCACTAGTTTTTATAAATTCTATGTTCATGCCTCAAATGAGACAA
194 TCGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
** * * *
121564 ACATGGATTCTAGTAAGGATCAGCATTCATTTCATGATTAGGCAGTATAAACACATTCTCCTTAA
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* *
121629 TAGGATAAATGATATTGATGGTTTTCTTTTGCGTGGAAATCTTTTCTTTGCCTTATTTTCGTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * *
121694 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCCCCATTCGTTTT-AA
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTTCAA
* *
121758 GACTAGGAACC-AAAACACATTCC
453 GATTGGGAACCAAAAACACATTCC
* * * *
121781 CTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * * * *
121846 CGATAAAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAACACTCATACTAATTCCTATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* *
121911 TTC-AGGATTAGGCACCGTAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * * *
121975 CACAAGAAATGTTTTTTTCCCACTAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAA
195 CGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* * * * *
122040 CATGGATTCCAGTAAGGATCTGCATTCATTTCGTAATTAGGCACAATAAACACATTCT-CTTAAA
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTT-AT
*
122104 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCGTTTCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * * *
122169 AATCAAAGTTTATATTTTAAATCAGACATGCATTGATTCGCGTAAAAGTCTCCA----TTTCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
122230 ATTGAGACCCAAAAAAACATTCC
454 ATTGGGAACCAAAAACACATTCC
* * * * * *
122253 TTTCATTAGAATACATGACATTGATACTTTGGTCTCGCAAAAGAAGCTTTTGTTTCCACTGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* *
122318 TAATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * * *
122383 TTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATAATGATGCTGTGGATTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
** * * *
122448 GCAAGAAACGC-TTTTTCCCACC-AATTCCTGT-AATGTATAAGTTCATTCCTCAAATGAGACAG
196 GCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAAT-TCTAAGTTCATGCCTCAAATGAGACAA
* * * * *
122510 ACATGGATTCTAGTAAGGATCTTCTTTCATTTCAG-GATTAGGCATTATAAATACTTTCTCCTCA
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTC-GTGATTAGGCACTATAAACACATTCTCCTTA
*
122574 TTAGGATAAATGATATT-A--------------ATGG-----TTTTCTTTGCCTCATTTTCCTTA
323 TTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTA
* * *
122619 AAATAAAAGTTTGTATTTTAATTGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTCTA
388 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC-A
* * *
122683 ACATAGGGAACCAAAAATACATTCC
452 AGATTGGGAACCAAAAACACATTCC
* * * *
122708 TTTCATTAGGAAACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTCCACCGCTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* *
122773 TGATAGAATCAAAGTTTGTCTCTTAAATAAGAC--ACATGAATACTCATACTAGTCCGCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * * *
122836 TTTTGGATTAGGCACCATAAACATAGTCTTCTCACAAGGATACATGATAATGATGCTTTGGATTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * *
122901 GCAAGAAACGC-TTTTTCCCCCCAATTTTTGT-AATGTATATGTTCATTCCTCAAATGAGACAGA
196 GCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAAT-TCTAAGTTCATGCCTCAAATGAGACAAA
* * * * * *
122964 CATGGATTCTGGTAAGGATCTTCTTTCATTTC-TGGATTAGGTATTATAAACACTTTCTCCTCAT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGT-GATTAGGCACTATAAACACATTCTCCTTAT
* * * *
123028 TAGGATAAATGATATTAATGGTTTTCTTTTGCCTAGAAATCTTTTCTTTACCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * * *
123093 AATCAGAGTTT-TCATTTTAATTGAGACATGCATTGATTCTCGTAAAAGCCTCCATTC-TTTCTA
389 AATCAAAGTTTGT-ACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC-A
* * * *
123156 ATATAGAGAACCAAAGACACATTCC
452 AGATTGGGAACCAAAAACACATTCC
* * * * *
123181 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCACCAGAAAAGTTTTTGTTTCCACCGTTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTT-A
* *
123246 TT-ATAGAATCAAAG-TTGTCTCTTAAATACGACAAACATGAATACCCATACTAATCCCCATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * * *
123309 TTT-TAGGATTAGGCACCATAAGCGTAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTT
130 TTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
* * * * ** * * * * **
123373 TCGCGAGATATGCTTTCTTCCAAAC-AATTTGTGTAAAGTATGAGTTCATTTCTCAAATGAGACA
194 TCGCAAGAAACGCTTTTTTCC-CCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACA
* * * * *
123437 AACATGGATTCTTGTAGGGATTTTCATTCATTTCGGGATTAGGCACTATAAACACATTCTCCTTT
258 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTA
123502 TTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTA
323 TTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTA
* * *
123567 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAAAGTCTCCACTCTTTCCAA
388 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
** * *
123632 GATTATGATCCAAAAACACTTTCC
453 GATTGGGAACCAAAAACACATTCC
* * * * * * *
123656 CTTCATCAGGATGA-ATGATACT-ATTGCTTTGGTGTTGCAATAGAAGCTTTTTTTTTCCACCGT
1 TTTCATTAGGAT-ACATGACATTGA-TGCTTTGGTGTCGCAAGAGAAGC-TTTTCTTTCCACCGT
* * * * *
123719 TAATGATAAAATCAAAGTTTATCTCTTAAATAAGATAAACATGAATACTCATACTAATTCCCATT
63 TATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATT
** * * * * *
123784 CTTTTCCGGATTAGGCACCATAGACATAGTCTTCTCATAAGAATAAAGGATACTGATCATTTGGT
128 CTTTTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGT
* ** * * *
123849 TTTGCAAGAAACATTTTTTTTCCACTAATTTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGAC
193 TTCGCAAGAAACGCTTTTTTCCCCCTAA-TTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGAC
* * *
123914 AAATATGGATTCTAGTAAGGATCTGCATTCATTTCATGATTAGGCACTATAAACACATTCT-CTT
257 AAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTT
* * *
123978 AAATAGGATAAATGTTATTGATGGTTTTCTTTTGCATGGAAATCATTTCTTTGCCTTATTTTCCT
322 -ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
* * * * **
124043 TAAAATCAAAGCTTATATTTTAAATGGGACATGCATTGATTCAAGTAAAAGTCTCCATTCTTTTC
386 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* * *
124108 AAGATTGAGACCCAAAAACACATTCT
451 AAGATTGGGAACCAAAAACACATTCC
* * * *
124134 TTTCATTAGAATACATGACATTGATACTTTGGTCTAGCAAGAGAAGCTTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * **
124199 TAATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAACACTCATACTAATCCATATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* *
124264 TTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAC------------A------TTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * *
124311 GCAAGAAATGCTTTTTTCCCCC-AGTTTTTGT-AATGTATAAGTTCATTCCTCAAATGAGACAGA
196 GCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAAT-TCTAAGTTCATGCCTCAAATGAGACAAA
* * * * * *
124374 CATGGATTCTAGTAAGGATCTTCTTTCATTTCGAGATTAGGCATTTTAAACACCTTCTCCTCATT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATT
* * * * *
124439 AGGGTAAATGATATTAATGATTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTCATTTTCCTTAAA
325 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
* * * * * *
124504 ATCAAAGATTGTATTTTAATTGAGACATGCATTGATTCTCGTAAAAGTCTACATTC-ATTCTAAC
390 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC-AAG
* *
124568 ATAGGGAACCAAAAATACATTCC
454 ATTGGGAACCAAAAACACATTCC
* * * * *
124591 TTTCATTAGGATACAAGATATTGATGCTTTGGTGTCGCAAGATAAGCTTTTCTTCCCACCGTTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
*
124656 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATTCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * *
124721 TTC-AGGACTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTCGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * * * *
124785 CGCAAGAAATGCTTTTTTCCCACTAATTTTTGTAAATTCTATGTTCGTGTCTCAAATAAGACAAA
195 CGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* * * * *
124850 CATGGATTCTAGTAAGGATCTTCTTTCATTTCGGGATAAGGCATTATAAACACTTTCTCCTCT-T
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-TAT
* * * *
124914 TAGGATAAATGATATTAATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTCATTTTCCCTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * * *
124979 AATCAAAGTTTGCATTTTAATTGAGACATGCATTGATTCTCGTAAAGGTCTCCATTCTTTTCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
125044 ATTAGGATCCAAAAACACTTTCC
454 ATTGGGAACCAAAAACACATTCC
* * * *
125067 CTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTTTTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC-TTTTCTTTCCACCGTTA
* * *
125132 ATGATAAAATCAAAGTTTGTCTCTTAAAAAAGACAAACATGAATACTCATACTAATCCCCATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* *
125197 TTTC-AGGATTAGGCTCCATAAACATAGTCTTCTCATAAGGATGCAGGATATTGATGATTTGGTT
130 TTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
* * * *
125261 AT-GCAAGAAACG-TTTTTT-CCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAGAC
194 -TCGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGAC
* * * * * *
125323 AAACATAGTTTCTAGTAAGGATCTTCATTCATTTCGGGGTTAGGCACAATAAACACAATCTCCTT
257 AAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTT
* * * *
125388 GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTT
322 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTT
* * *
125453 AAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATTCTTGCAAAAGTCTCCATTCGTTTT-
387 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTTC
*
125517 AAGATTGGGAACCAAAAACATATTGCC
451 AAGATTGGGAACCAAAAACACATT-CC
* * * *
125544 -TTCATTAGGATACATGACGTTGATGCGTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * * **
125608 TGATAGAATCATAGTTTGACTCTTAAATAAGACAAACATGAATACTCATGCTAATGCATATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * *
125673 TTCTGGATTAGGCACCGTAAACATAGTCTTCTCATAGGGATAAATGATATTGATGCTTTGGTTTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * * * * *
125738 GCAAGAAACGCTTTCTTTCCCTC-AATTTTTGTAAAGTATAAGTTGATTCCTAAAATTAGACAGA
196 GCAAGAAACGCTTT-TTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* *
125802 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACAGATTCTCCTCATT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATT
* * * *
125867 AAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGACTTATTTTACTTAAA
325 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
* * * *
125932 ATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGA
390 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
* * * *
125997 TTTGGATCCAAAACCACTTTCC
455 TTGGGAACCAAAAACACATTCC
* * * * *
126019 CTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTTTTTTTCCACCGTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC--TTTTCTTTCCACCGTT
* * * *
126084 AATGATAAAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATTCCCATTC
64 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTC
* * **
126149 TTTT-TAGGATTAGGCTCCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTCAT
129 TTTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGT
* * * * *
126213 TTCGCAAGAAATGCTTTTTTCCCACTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACA
193 TTCGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACA
* * * *
126278 AACATGGATTCTAGTAAGGATCTTCTTTCATTTCGGGATTAGGCATTATAAACACTTTCTCCTCT
258 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-T
* * * *
126343 -TTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTCATTTTCCCT
322 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTT
* * * * *
126407 AAAATCAAAGTGTGCATTTTAATTGAGACATGCATTGATTCTCGTAAAGGTCTCCATTCTTTTCA
387 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* * *
126472 AGATTAGGATCCAAAAACACTTTCC
452 AGATTGGGAACCAAAAACACATTCC
* * * * * *
126497 ATTCAGTAGGATAAATGACATTGATGCTTTGGTGTTGTAAGAGAAGCATTTTTTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC-TTTTCTTTCCACCGTTA
* * * * *
126562 ATGATAAAATTAATGTTTGTCTCGTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * *
126627 TTTC-AGGATTGGGCACCATAAACATAGTCCTCACATAAGGATACAGGATATTGATGATTTGGTT
130 TTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
* * * * * *
126691 TCGCAAGAAACGCTTTTTT-CCCATCAATTTCTATAAATTCTATGTTCATGCCACAAATGACACA
194 TCGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACA
* * * *
126755 AACATGGATCCTAGTAAGGATCTTCATTCATTTCGTGATTAAGCACTATAAACACAATCTCCTTG
258 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTA
* * * *
126820 TCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCATTATTTTCCTTA
323 TTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTA
* * *
126885 AAATCAAAGTTTGTACTTTAAATGAGACATACATTGATTCTTGCAAAAGTCTCCATTCGTTTT-A
388 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTTCA
*
126949 AGATTGGGAACCAAAAACATATTGCC
452 AGATTGGGAACCAAAAACACATT-CC
* * * *
126975 -TTCATTAGGATACATGACGTTGATGCGTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * * **
127039 TGATAGAATCATAGTTTGACTCTTAAATAAGACAAACATGAATACTCATGCTAATGCATATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * *
127104 TTCTGGATTAGGCACCGTAAACATAGTCTTCTCATAGGGATAAATGATATTGATGCTTTGGTTTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * * * * *
127169 GCAAGAAACGCTTTCTTTCCCTC-AATTTTTGTAAAGTATAAGTTGATTCCTAAAATTAGACAGA
196 GCAAGAAACGCTTT-TTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* *
127233 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACAGATTCTCCTCATT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATT
* * *
127298 AAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTACTTAAA
325 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
* * * *
127363 ATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGA
390 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
* * * *
127428 TTTGGATCCAAAACCACTTTCC
455 TTGGGAACCAAAAACACATTCC
* * * * *
127450 CTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTTTTTTTCCACCGTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC--TTTTCTTTCCACCGTT
* * * *
127515 AATGATAAAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATTCCCATTC
64 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTC
* * **
127580 TTTT-TAGGATTAGGCTCCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTCAT
129 TTTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGT
* * * * *
127644 TTCGCAAGAAATGCTTTTTTCCCACTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACA
193 TTCGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACA
* * * *
127709 AACATGGATTCTAGTAAGGATCTTCTTTCATTTCGGGATTAGGCATTATAAACACTTTCTCCTCT
258 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-T
* * * *
127774 -TTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTCATTTTCCCT
322 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTT
* * * * *
127838 AAAATCAAAGTGTGCATTTTAATTGAGACATGCATTGATTCTCGTAAAGGTCTCCATTCTTTTCA
387 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* * *
127903 AGATTAGGATCCAAAAACACTTTCC
452 AGATTGGGAACCAAAAACACATTCC
* * * * * *
127928 ATTCAGTAGGATAAATGACATTGATGCTTTGGTGTTGTAAGAGAAGCTTTTTTTTTTTCCACCGT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC---TTTTCTTTCCACCGT
* * * *
127993 TAATGATAAAATCAAAGTTTGTTTCTTAAAAAAGACAAACATGAATACTCATACTAATCCCCATT
63 TATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATT
* ** * *
128058 TTTTTC-AGGATTAGGCTTCGTAAACATAGTCTTCTCATAAGGATGCAGGATATTGATGATTTGG
128 CTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGG
* * * *
128122 TTAT-GCAAGAAACGCTTTTTT-CCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAG
192 TT-TCGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAG
* * * *
128185 ACAAACATGGATCCTAGTAAGGATCTTCATTCATTTCATGATTAAGCACTATAAACACAATCTCC
255 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC
* * * * *
128250 TTGTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCATTATTTTCC
320 TTATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCC
* * *
128315 TTAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATTCTTGCAAAAGTCTCCATTCGTTT
385 TTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTT
*
128380 T-AAGATTGGGAACCAAAAACATATTGCC
449 TCAAGATTGGGAACCAAAAACACATT-CC
* * * *
128408 -TTCATTAGGATACATGACGTTGATGCGTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * * **
128472 TGATAGAATCATAGTTTGACTCTTAAATAAGACAAACATGAATACTCATGCTAATGCATATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * *
128537 TTCTGGATTAGGCACCGTAAACATAGTCTTCTCATAGGGATAAATGATATTGATGCTTTGGTTTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * * * * *
128602 GCAAGAAACGCTTTCTTTCCCTC-AATTTTTGTAAAGTATAAGTTGATTCCTAAAATTAGACAGA
196 GCAAGAAACGCTTT-TTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* *
128666 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACAGATTCTCCTCATT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATT
* * *
128731 AAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTACTTAAA
325 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
* * * *
128796 ATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGA
390 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
* * * *
128861 TTTGGATCCAAAACCACTTTCC
455 TTGGGAACCAAAAACACATTCC
* * * * *
128883 CTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTTTTTTTCCACCGTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC--TTTTCTTTCCACCGTT
* * * *
128948 AATGATAAAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATTCCCATTC
64 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTC
* * **
129013 TTTT-TAGGATTAGGCTCCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTCAT
129 TTTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGT
* * * * *
129077 TTCGCAAGAAATGCTTTTTTCCCACTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACA
193 TTCGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACA
* * * *
129142 AACATGGATTCTAGTAAGGATCTTCTTTCATTTCGGGATTAGGCATTATAAACACTTTCTCCTCT
258 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-T
* * * *
129207 -TTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTCATTTTCCCT
322 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTT
* * * * *
129271 AAAATCAAAGTGTGCATTTTAATTGAGACATGCATTGATTCTCGTAAAGGTCTCCATTCTTTTCA
387 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* * *
129336 AGATTAGGATCCAAAAACACTTTCC
452 AGATTGGGAACCAAAAACACATTCC
* * * * * *
129361 ATTCAGTAGGATAAATGACATTGATGCTTTGGTGTTGTAAGAGAAGCTTTTTTTTTTTCCACCGT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC---TTTTCTTTCCACCGT
* * * *
129426 TAATGATAAAATCAAAGTTTGTTTCTTAAAAAAGACAAACATGAATACTCATACTAATCCCCATT
63 TATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATT
* ** * *
129491 TTTTTC-AGGATTAGGCTTCGTAAACATAGTCTTCTCATAAGGATGCAGGATATTGATGATTTGG
128 CTTTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGG
* * * *
129555 TTAT-GCAAGAAACGCTTTTTT-CCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAG
192 TT-TCGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAG
* * * *
129618 ACAAACATGGATCCTAGTAAGGATCTTCATTCATTTCATGATTAAGCACTATAAACACAATCTCC
255 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC
* * * * *
129683 TTGTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCATTATTTTCC
320 TTATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCC
* * *
129748 TTAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATTCTTGCAAAAGTCTCCATTCGTTT
385 TTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTT
*
129813 T-AAGATTGGGAACCAAAAACATATTGCC
449 TCAAGATTGGGAACCAAAAACACATT-CC
* * * *
129841 -TTCATTAGGATACATGACGTTGATGCGTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * * * **
129905 TGATAGATTCAAAGTTTGACTCTTAAATAAGACAAAGATGAATACTCATGCTAATGCATATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * *
129970 TTCTGGATTAGGCACCATAAACATAGTCTTCTCATAGGGATAAATGATATTGATGCTTTGGTTTT
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * * * * *
130035 GCAAGAAACGCTTTCTTTCCCTC-AATTTTTGTAAAGTATAAGTTGATTCCTAAAATTAGACAGA
196 GCAAGAAACGCTTT-TTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* *
130099 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACAGATTCTCCTCATT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATT
* * * *
130164 AAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTAGTTTACTTAAA
325 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
* * * *
130229 ATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGA
390 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
* * * *
130294 TTTGGATCCAAAACCACTTTCC
455 TTGGGAACCAAAAACACATTCC
* * * * *
130316 CTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTTTTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC-TTTTCTTTCCACCGTTA
* * * * *
130381 ATGATAAAATAAAAGTTTGTCTCTTATATAAGACAAACATGAATACTCATACTAATTCCCATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * **
130446 TTTC-AGGATTAGGCTCCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTCATT
130 TTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
* ** * * *
130510 TCGCAAGAAATGCTTTTTTCCAACTAATTTTTGTAAATTCTATGTTCGA-GCCTCAAATAAGGCA
194 TCGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTC-ATGCCTCAAATGAGACA
* * * * *
130574 AACATGGATTCTAGTAAGGATCTTCTTTCATTTCGGGATTAGGCATTATAAACACTTTTTCCTCT
258 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-T
* * * * * * *
130639 -TTAGGATAAATAATATTAATGGTTTTCTTTTTCCTAGAAATCTTTTCTTTGCCTCATTTTCCCT
322 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTT
* * * * * * * *
130703 AAAATCAAAGTTTGCATTTTAATTGAGACATGCATTGATTCCCATAAAGGTCTCCACTCTTTCCA
387 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* * *
130768 AGATTAGGATCCAAAAACACTTTCC
452 AGATTGGGAACCAAAAACACATTCC
* * * *
130793 CTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTCTTTTTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCT-TTTCTTTCCACCGTTA
* * * * * *
130858 ATGATAAAATCAAAGTTTTTCTCTTAAATAAGACAAACATTAATACCCATACTAATCCCCATTGT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * * * *
130923 TTT-TAGGATTAGTCTCCATAAACAT-GTCTTCTCATAAGGATGCAGGATATTCATGATTAGGTT
130 TTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
* * * *
130986 AT-GCAAGAAACGCTTTTTT-CCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAGAC
194 -TCGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGAC
* * * *
131049 AAACATAGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACAATAAACACAATCTCCTT
257 AAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTT
* * * * *
131114 GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCATATTTTCCTT
322 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTT
* * *
131179 AAAATCAAAGTTTGTACTTTAAATGAGACAGGCATTGATTCTTGCAAAAGTCTCCATTCATTTT-
387 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTTC
*
131243 AAGATTGGGAACAAAAAACACATTGCC
451 AAGATTGGGAACCAAAAACACATT-CC
** * *
131270 -TTCATTAGGATACATGATGTTGATGCTTTGGTGTCGCAAGAAAAGCTTGTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* ** * * **
131334 TGATAGAATCAAAGTTTGACTCTTACGTAAGACAAACATGAATACTCATGCTAATGCATATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * *
131399 TTCTGGATTAGGCACCGTAAACATAGTCTTCTCATAGGGATAAATGATATTGATGCTTTGGTTTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * * * * *
131464 GCAAGAAACGCTTTCTTTCCCTC-AATTTTTGTAAAGTATAAGTTGATTCCTAAAATTAGACAGA
196 GCAAGAAACGCTTT-TTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* * * *
131528 CATGGATACTAGTAAGGATCTTTATTCATTTCGTGATTAGGCACTATAAACAGATTCTCCTCATT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATT
* * * * *
131593 AAGATAAAGGATATTGATGGTTTTCTTTTGCTTGAAAATCTTTTCTTTGCCTTATTTTACTTAAA
325 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
* * * *
131658 ATCAAAGTTTGTACTTTAAATGGGACAGGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCAAGA
390 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
** * *
131723 TTCAGATCCAAAAACACTTTCC
455 TTGGGAACCAAAAACACATTCC
* * * * *
131745 CTTGATTAGGATAAATGACATTGATGCTTTGGTG-CTGCAAGAGAAGCTTTTTTTTTCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTC-GCAAGAGAAGCTTTTCTTTCCACCGTTA
* * * * *
131809 ATGATAAAATAAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCACACTAATTCCCATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
*
131874 TTT-TAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTT
130 TTTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
* * * * *
131938 TCGTAAGAAATGC-TTTTTCCCCCTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACAA
194 TCGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * * *
132002 ACATGGATTCTAGTAAGGATCTGCTTTCATTTCGTGATTAGACACTATAAACACATTCTCCTTAA
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * *
132067 TAGGATAAATGATATTGATGGTTTTCTTTGGCAAGGAAATCTTTTCTTTGCCTTATTTTCTTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* *
132132 AATCAAAGTTTGTATTTTAAATGAGACATGCATCGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
*
132197 ATTGAGAACCAAAAACACATTCC
454 ATTGGGAACCAAAAACACATTCC
* * *
132220 TTTCATTAGGATAAATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACTGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * *
132285 TGATAGAATCAAA----G----TT--ATAAGACAAACATTAATATTCATACTAGTCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* ** * * * *
132340 TTCTGGATTAGGCACTGTAAAAATAGTCTTCTCATAAAGATTCAGGATATTGATGATTTGGCTTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * *
132405 GCAAGAAACTCTTTTTTCCCACC-AATTTTTGTAAATTTTAAGTTCGTGCCTCAAATGAGATAGA
196 GCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* * *
132469 CATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTATGCACTATAAACACATTCTCCTCATT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATT
* * *
132534 AGGATACATGATATTGATGGTTTTCTTTTGCGTGGAAAACTTTTCTTTGCCTTATTTTCCTTAAA
325 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
* * * *
132599 A-AAAAGTTTGTACTTTAAATGAGGCATGCATTGATTCTCGTAAAAGTCTACATTCTTTCCAAGA
390 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
* *
132663 TTGGGAACAAAAAACACATTAAC
455 TTGGGAACCAAAAACACATT-CC
* * * * *
132686 -TTCATTAGGATACATGGCATTGATGCTTTGGTGTTGTAAGAGAAGCTTTTCTGTCCACCGTTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * *
132750 TGATAAAATCAAAGTTTATCTCTTAAATAAGGCAAACATGAATACTCATACTAATCCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* *
132815 TTC-AGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGAATATTGATGTTTTGGTTT
131 TTCTAG-ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
** * * * * *
132879 CGCAAGAAATACTTTTTT-CCCATCAATTTCTGTAAATTCTATGTTCGTGGCTCAAATGAGACAA
195 CGCAAGAAACGCTTTTTTCCCCCT-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * * * *
132943 ACAGGGATTCTACTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACATATTCTTCTCAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * * *
133008 TAGGACAAATGATATTTAAGGTTTTC-TTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
*
133072 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCAATCTTTTCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
*
133137 ATTGGGAACCAAAAACACATTTC
454 ATTGGGAACCAAAAACACATTCC
*
133160 TTTCATTAGGATACATGACATTGATGCTTTGGTATCGCAAGAGAAG----------CACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * **
133215 TGATAGAATCAAGGTTTGTCTCTTAAATAAGACAAACACGAATATTCATACTAATCTACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * ** *
133280 TTCTAGATTAGGCACCGTAAAAATAACCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTT
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* **
133345 GCAAGAAATGCTTTTTTCCCACC-AATTTTTGTAAATTCTAAGTTTGTG-C-C-AATGAGACAAA
196 GCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* * * * * * * * * *
133406 CATGAATTCTAGTAAGGATCTTCTTTCATTCCGGGATTAAGCACTATAAATACAATCTTCTCATC
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATT
* * * **
133471 AGGATATACGATATTGATAGTTTTCTTTTGCATTAAAATCTTTTCTTTGCCTTATTTTCCTTAAA
325 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
* * *
133536 ATCAAAGTTTGTACTTTAAATGAGACATGCATCGATTCTTGTAAAAGTCTCCATTCTTTTTAAGA
390 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
133601 TTGGGAACCAAAAACACATTCC
455 TTGGGAACCAAAAACACATTCC
* * * *
133623 TTTCATTAGGATACATGATATT-AGTGCTTTGGCGTCACAAGAGAAGCTTGTCTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGA-TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA
* * * * **
133687 TTCATAGAATCAAGGTTTGTCTCTTAAATAAGACAAACACGAATATTCATACTAATCTACATTCT
65 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCT
* * * *
133752 TTTCTAGATTAGGCACCGTAAAAATAGTCTTCTCATAAAGATACAGGATATTGATGATTTGGCTT
130 TTTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* ** * * * * *
133817 CGGAAGAAACTATTTTTTCCCACC-AA-TTTGGTAAATTCTAAGTTCGTGCCTCAAATCAAACAG
195 CGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
** * *
133880 ACATAAATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTTTCCTCAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
**
133945 TAGGATACTTGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * * *
134010 AATCAAATTTTGTATTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTTCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
134075 ATTGAGAACCAAAAACAAATTTC
454 ATTGGGAACCAAAAACACATTCC
* * * *
134098 TTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAGAAAAGCCTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * *
134163 TAATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATAAATACTCATACTAATCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * * * * * *
134228 TTTTGGATTAGGCACCATAAACGTAGTCTTCTCACAGGGATACATGATAATGATGCTTTGGATTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
**** * * **
134293 GCAAGAAACGCTTCCCCCCCCCCCCCACCCCCAATTTTTGT-AATGTATAAGTTCATTTCTCAAA
196 GCAAGAAACGCTT--------TTTTC-CCCCTAATTTTTGTAAAT-TCTAAGTTCATGCCTCAAA
* * * * *
134357 TTAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCGGGATTAGGCACAATAAACACAAT
251 TGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATT
* * * *
134422 CTCC---TT--G-T-CACG--A-T-A-------CTTTTACACGGAAATCTTTTCTTTGCCTTATT
316 CTCCTTATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATT
* * * *
134469 TTCCTTAAAATCAAAGTTTATACTTTAAATGATA-ATGCATTGATGCTCATAAAAGTCTCCATTC
381 TTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC
* *
134533 TTTTCAAGATTGAGACCCAAAAACACATTCC
446 TTTTCAAGATTGGGAACCAAAAACACATTCC
* * * * * *
134564 TTTCATTAGAATACATGACATTGATACTTTGGTCTCGCAAGAAAAGCTTTTCTTTCCATCGTTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * *
134629 TGATAGAATCAAAG-TTGTCTCTTAAATACGACAAACAGGAATACCCATACTAATCCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * *
134693 TT-TAGGATTAGGCACCATAAGCGTAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * * * * * *
134757 CG-AGAGATATGCTTTCTTCGCACC-AATTTGTGTAAAGTATGAGTTCATTG-CTCAAATGAGAC
195 CGCA-AGAAACGCTTTTTTC-CCCCTAATTTTTGTAAATTCTAAGTTCA-TGCCTCAAATGAGAC
* * *
134819 AAACATGGATTCTTGTAGGGATCTTCATTCATTTCAG-GATTAGGCACTATAAACACGTTCTCCT
257 AAACATGGATTCTAGTAAGGATCTTCATTCATTTC-GTGATTAGGCACTATAAACACATTCTCCT
*
134883 TTTTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
321 TATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
* * *
134948 TAAAATCAAAGTTTATACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCGTTTT
386 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTT
*
135013 -AAGATTAGGAACCAAAAACACATTCC
450 CAAGATTGGGAACCAAAAACACATTCC
* * * * *
135039 CTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTCCACCATTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * *
135104 TGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAACACTCATACTAATTCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* *
135169 TTC-AGGATTAGGCACTATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * *
135233 CACAAGAAATGCTTTTTTCCCACTAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAA
195 CGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* * * *
135298 CATTGATTCTAGTAAGGATCTGCATTCATTTCGTGATTGGGCACTATAAACACATTCT-CTTAAA
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTT-AT
*
135362 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCATTTCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * *
135427 AATCAAAGTTTATATTTTAAATGAGACATGCATTGATTCGCGTAAAAGTCTCCATTCTTTTCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
135492 ATTGAGACCCAAAAACAAATTCC
454 ATTGGGAACCAAAAACACATTCC
* *** * * *
135515 TTTCATTAGAATACATGACATTGGCACTTTGGTCTTGCAAGAGAAGCTTTTCTTTCCACCGTTAC
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * *
135580 TAATAGAATAAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * *
135645 TTTTGGATTAGGCACCATAAACATAATCTTCTCATAAGGATAC---------ATGATTTGGTTTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* ** *
135701 GCAAGAAACGATTTTTTCCCTCC-AATTTTTGTAAATTCTAAGTTTGTGCTTCAAATGAGACAAA
196 GCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
**
135765 TGTGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCT-CTTCAT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTT-AT
* * * *
135829 CAGGATACATGATATTGATGGTTTTTTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * *
135894 AATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTTGTAAAAGTCTCCATT-TGTTTTAA
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCT-TTTCAA
*
135958 GGTTGGGAACCAAAAACACATTCC
453 GATTGGGAACCAAAAACACATTCC
* *
135982 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * *
136047 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACCCATACTAATCCCCTTTCCT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * *
136112 TTC-AGGATTAGGCACCATAAACATAGTCTTCTCATAAGCATACATGATGTTGATGCTGTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * * * * * *
136176 CGCAACATACGCTTTCTTCCCACCT-ATTTTTGTAAAGTATAAGTTCATTCCTCAAATTAGGCAA
195 CGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * * * *
136240 ACATGGATTCTTA-TAAGGATCTTCATCCATTTTGGGATTCGGCACTATAAACACATTCTCCTCA
259 ACATGGATTC-TAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTA
* *
136304 TTAGGATAAATGATATTGATAGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCGA-TTTCCTT
323 TTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCT-TATTTTCCTT
* * *
136368 AAAATCAAATTTTGTACTTTAAATGGGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCA
387 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
136433 AGATTGGGAACCAAAAACACATTCCC
452 AGATTGGGAACCAAAAACACATT-CC
* * * *
136459 TTT-ATTAGGATACATGACATTAATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACATTTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * ** * *
136523 TGATAAAATCAAAGTCTACCTCTTAAATAAGACAAATATAAATACTC--A-T-A----C--TC-T
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * *
136577 TT-AAGATTAGGCACCATAAACATTGTCTTCTCATACGGATACAGGATATTGATGATTTGGTTTT
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * *
136641 GCAAGAAACGCTTTTCTCCCACC-AATTTTTGTAAATTTTAAGTTCTTGCCTTAAATGAGACAGA
196 GCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* * **
136705 CATGGATTCTAGTAAGGATCTTCATTTATTTCGTGATTAGGCACTATACACACATTCTCCTCCTT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATT
* * * * * *
136770 AGGATACAA-GGTATTGATGGTTTTCTTATACGTGAAAATCTTTTCTTTGCCTTATTTTCCTTGA
325 AGGATA-AATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
*
136834 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCATTCTTTTCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
136899 ATTAGGATCCAAAAACTCATTTCC
454 ATTGGGAACCAAAAACACA-TTCC
* * * * * *
136923 -TTCATTAAGATACGTGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT-TTTTCACCATTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* **
136986 TGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACACAAATACTCATACTAATCCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * *
137051 TTC-AGGATTAGGCACCATAAACGTAGTCTTCTCATAAAGATACTGGATATTGATGATTTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* *
137115 -GACAAGAAACGATTTTTTCCCTCC-AATTTTTGTAAATTCTAAGGTT--TGCTTCAAATGAGAC
195 CG-CAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAA-GTTCATGCCTCAAATGAGAC
**
137176 AAATGTGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCT-CTT
257 AAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTT
* * * *
137240 CATCAGGATACATGATATTGATGGTTTTTTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCA
322 -ATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
* *
137305 TAAAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTTGTAAAAGTCTCCATT-TGTTT
386 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCT-TTT
* *
137369 TAAGATTGGGAACGAAAAACACATTCC
450 CAAGATTGGGAACCAAAAACACATTCC
* * * *
137396 CTTCTTTAGGATACATGACATTGTTGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * *
137461 TGATAGAATCAAAGTTTGTCTTTTAAATAAGACAAACATGAATACCCATACTAATGCCCTTTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * *
137526 TT-TAGGATTAGGCACAATAAACATAGTCTTCTCGTAAGGATACATGATATTGATGCTTTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * * * * * *
137590 CACAACAAACGCTTTCTTCCCTCCT-ATTTTTGTAAAGTATAAGTTCATTCCTCAAATTAGAAAA
195 CGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * * *
137654 ACATGGATTCTTGTAAGGATCTTCATTCATTTCGTGATTCGGCACTATAAAGACATTCTCCTCAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * *
137719 TAGGAT--A-GATATTGATAGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTCAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * *
137781 AACCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCCCCATTCTTTTCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
137846 ATTTGGATCCAAAAACTCATTTCC
454 ATTGGGAACCAAAAACACA-TTCC
* * * * * *
137870 -TTCATTAGGATACATGGCATTGATGCTTTGGTATCGCAAGAGAAGCTTTTTTTTCTACCATTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* *
137934 TGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATACTCATACTAATCCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * *
137999 TTC-AGGATTAGGCACCATAAACATAGTCTTCTCATAAAGATACTGGATAATGCTGATTTGGTTA
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * *
138063 CGCAAGAAACGATTTTTTCCCTCC-AATTTTTGTAAATTTTAAGTTTATGCTTCAAATGAGACAA
195 CGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * *
138127 ACGTGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * * * * *
138192 CAGGATACATGATATTGATGGTTTTTTTTTTGCATGGAAATATTTTTTTTGCCTTATTTTCCATA
324 TAGGATAAATGATATTGATGG-TTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTA
* * * *
138257 AAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTTGTAAAAGTCTCAATT-TGTTTGA
388 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCT-TTTCA
* *
138321 AGATTGGGAACCAAAAACTCATGCC
452 AGATTGGGAACCAAAAACACATTCC
* * * *
138346 CTTCATTAGGATACATGACATCGATGCTTTGGTGTTGCAAGAGAAGCTTGTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * *
138411 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAGACATGAATACCCATACTAAT-CCCTTTCCT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
** * * * * *
138475 TTCCGGATTAGGCACCATAAACATAGTCTTCTCATAAGCATACATGATATTGATGCTGTGCTTTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * * * * *
138540 GCAACATACGCTTTCTTCCCACCT-ATTTTTGTAAAGTATAAGTTCATTCCTAAAATTAGACAAA
196 GCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
* * * ** *
138604 CAAGGATTCTTA-TAAGGATCTTCATTCATTTTGTGATTCGATACTATAAACACATTCTCCTCAT
260 CATGGATTC-TAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* **
138668 TAGGATAAATGATATTGATAGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCGTTTTCCTTAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * *
138733 AATCAAAGTTTGTACTTTAAATGGGACATGCATTAATTCTCGTAAAAGTCTCCATTCTTTCCAAG
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
138798 ATTGGGAACCAAAAACACATTCC
454 ATTGGGAACCAAAAACACATTCC
* * * * * * *
138821 CTTCATTAGGATACGTGACATTAATACTTTGGTGTCGCAAAAGAAGCTTTTCTTTCCAACATTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * ** * *
138886 TGATAAAATCAAAGTCTACCTCTTAAATAAGACAAATATGAATACTCATACTAATCCACATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * *
138951 TTCAAGATTAGGCACCATAAACATAGTTTTCTCATACGGATACATGATATTGATGATTTGGTTTC
131 TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
** * * * *
139016 GCAAGAAACGCTTTTTTCTGACC-AATTTTTGTAAATTTTAAGTTCTTGCCTTAAATGAGACAGA
196 GCAAGAAACGCTTTTTTC-CCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAA
** * * * * *
139080 CATTAATTCTAGCAAAGATTTTCATTCATTTCGTGATTAGGCACTATATACACATTCTCCTCATT
260 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATT
*
139145 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTCAAA
325 AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
* * * * *
139210 ACCAAAGTTTGTACTTTAAATGAGACAAGCTTTGATTCTCGTAAAAATCCCCATTCTTTTCAAGA
390 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
* * *
139275 TTAGGATCCAAAAACTCATTTCC
455 TTGGGAACCAAAAACACA-TTCC
* * *
139298 -TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTTTTTCCACCATTAA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * *
139362 CGATAAAATCAAAGTTTATCTCTTAAATAAGACAAACACGAATACTCATACTAATCCCCATTCTT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * *
139427 TTC-AGGATTAGGCACCATAAACGTAGTCTTCTCATAAAGATACTGGATATTGTTGATTTGGTTA
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT-
* * * **
139491 T-GCAAGAAA-------------C-AATTCTTGTAAATTTTAAGTTTATGTTTCAAATGAGACAA
194 TCGCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* *
139541 ACGTGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAT
259 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTAT
* * * * *
139606 CAAGATACATGATATTGATGGTTTTTTTTTGCATGGAAATCTTTTCTTTGCCTT-TTTTCCATAA
324 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* ** *
139670 AATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTTATAAAAGTCTCCATT-TGTTTTAA
389 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCT-TTTCAA
139734 GATTGGGAACCAAAAACACATTCC
453 GATTGGGAACCAAAAACACATTCC
* * * *
139758 CTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTTGTCTTTCCACCATTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
* * * * *
139823 TTATAGAATCAAAGTTTGTCTCTTAGATAAGACAGACATGAATAC-CATACTAATCCCCTTTCCT
66 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
* * * * *
139887 TTC-AGGATTAGGCGCCATAAACATAGTCTTCTCATAAGCATACATGATATTGATGCTGTGGTTT
131 TTCTA-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
* * * * * * * *
139951 CGCAACATATGCTTTCTTCCCACCT-ATTTTTGTAAAGTATAAGTTCATTCCTCAAATTAGACAA
195 CGCAAGAAACGCTTTTTTCCC-CCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAA
* * **
140015 ACAAGGATTCTTA-TAAGGATCTTCATTCATTTTGTGATTCGATACTATAAACACATTCTCCTCA
259 ACATGGATTC-TAGTAAGGATCTTCATTCA-TTT-CG--T-G--A-T-T--AGGCA-------C-
* * *
140079 TTAGGATAAACACATTCTCCTCATTAGGATAAATGATATTGATAGTTTTCTTTTGTATGGAAATC
304 -T---ATAAACACATTCTCCTTATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATC
** * *
140144 TTTTCTTTGCCTCGTTTTCCTTAAAATCAAAGTTTGTACTTTAAATGGGACATGCAATGATTCTC
365 TTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTC
* * *
140209 GTAAAAGTCTCCATTCTTTCCAACATTAGGAACCAAAAACACATTCC
430 GTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCC
* * * * *
140256 TTTCATTAGGATATAAGGCATTAATGCTTTGGTGTCGCAAGGGAAGCTTTTCTTTCCA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
140314 ACATTATTAT
Statistics
Matches: 27927, Mismatches: 3826, Indels: 1143
0.85 0.12 0.03
Matches are distributed among these distances:
451 71 0.00
452 2 0.00
453 223 0.01
454 5 0.00
455 108 0.00
456 93 0.00
457 373 0.01
458 3 0.00
459 22 0.00
460 82 0.00
461 177 0.01
462 228 0.01
463 219 0.01
464 334 0.01
465 519 0.02
466 301 0.01
467 482 0.02
468 4 0.00
469 1 0.00
470 10 0.00
471 280 0.01
472 540 0.02
473 2093 0.07
474 1351 0.05
475 5661 0.20
476 8983 0.32
477 2328 0.08
478 1660 0.06
479 876 0.03
480 98 0.00
481 38 0.00
482 4 0.00
483 40 0.00
484 8 0.00
485 84 0.00
486 1 0.00
487 1 0.00
492 1 0.00
493 1 0.00
494 1 0.00
496 2 0.00
497 315 0.01
498 298 0.01
499 6 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (476 bp):
TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT
TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT
TTCTAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
GCAAGAAACGCTTTTTTCCCCCTAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAAC
ATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTTATTA
GGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAA
TCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGAT
TGGGAACCAAAAACACATTCC
Found at i:114227 original size:159 final size:158
Alignment explanation
Indices: 112636--114250 Score: 403
Period size: 159 Copynumber: 10.2 Consensus size: 158
112626 TTTTCCTTAA
*
112636 AATCAAATTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
1 AATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
112701 ATT-GAGAACCAAAAACAAATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAG
66 ATTAG-GAACCAAAAACAAATT-CTTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAG
112765 AGAAGCCTTTCTTTCCACCGTTATTAATAG
129 AGAAGCCTTTCTTTCCACCGTTATTAATAG
* * ** * * * * **
112795 AATCAAAGTTTGTCTTTTAAATAAGACAAACA-TAATACTCATACTAA-TC-CACATTCTTTTTT
1 AATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTA-AAAGTCTC-CATTCTTTTCA
* * * * * * * * * *
112857 GGATTAGGCACCATAAACATAGTC--T-AATAGGGACACATGATAATGATGCTTTTGAT-TCGCA
64 AGATTAGGAACCAAAAACAAATTCTTTCATTA-GGATACATGACATTGATGC-TTTGGTCTCGCA
* *** * *** * *
112918 AGA-AA-CGCTTCCCCCCCCCCCCCCAATT-TTTG
127 AGAGAAGC-CTT--TCTTTCCACCGTTATTAATAG
* * * * * * * *
112950 TAATGTATAAG-TT-CATTCCTCAAATGAGACA-GACATTGATTCTAGT-AAGGATCTTCTTTCA
1 -AAT-CA-AAGTTTGTATT--TTAAATGAGACATG-CATTGATTCTCGTAAAAG-TCTCCATTCT
** * ** * ** * * * * * * ** *
113011 TTTCGGGATTAGGCATTATAAACACTTTCTCCTCTTTAGGATAAATGATATTAATGGTTTTCTTT
59 TTTCAAGATTAGGAACCAAAAACAAATTCT-TTCATTAGGATACATGACATTGATGCTTTGGTCT
* ** * * * * ** *
113076 TGCCTG-GAAATCTTTTCTTTGCC-TCATT-TTCCCTAA
123 CGCAAGAG-AAGCCTTTCTTT-CCACCGTTATT-AATAG
* * * * * *
113112 AATCAAAGTTTGCATTTTAATTGAGACAAGCATTGATTCTCGTAAAGGTCTCCACTCTTTCCAAG
1 AATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* ** * * * *
113177 ATTAGGATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGA
66 ATTAGGAACCAAAAACAAATT-CTTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAGA
* * * * *
113242 GAAGCTTTTTTTTTCCACCGTTAATGATAA
130 GAAGC-CTTTCTTTCCACCGTTATTAATAG
* * ** * * * * *
113272 AATCAAAGTTTGTCA-CTTAAATAAGACAAACA-TGAATGCTCATACTAA-TCTCAATTTTTTTC
1 AATCAAAGTTTGT-ATTTTAAATGAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTCTTTTC
* ** * * * * * * * *
113334 -AGCATTACGCTCCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGT-TATG
63 AAG-ATTAGGAACCAAAAACAAATTCTT-TCATTAGGATACATGACATTGATGCTTTGGTCT-CG
* * **
113397 CAATA-AA-CGATTT-TTTCCCATCAATT-TCT-ATA-
125 CAAGAGAAGC-CTTTCTTT-CCA-CCGTTAT-TAATAG
* * * *** * ** * * * * *
113429 AATTCTATGTTCGTGCCTCAAATGAGACAAACATAGATTCTAGTAAGAA-TCTTCATTCATTTCG
1 AA-TCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAA-AAGTCTCCATTCTTTTCA
* * * * * * * * ** * *
113493 TGATTAGGCA-CAATAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGC
64 AGATTAGGAACCAA-AAACA-AAT-TCTTTCATTAGGATACATGACATTGATGCTTTGGTCTCGC
* * * ** ** *
113556 ATGA-AATCTTTTCTTT--GTC-TTATTTTCCTTAA
126 AAGAGAAGCCTTTCTTTCCACCGTTA--TT-AATAG
113588 AATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
1 AATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
*
113653 ATT-GAGAACCAAAAACAAATTCCTTTCATTA-GAGTACATAACATTGATGCTTTGGTCTCGCAA
66 ATTAG-GAACCAAAAACAAATT-CTTTCATTAGGA-TACATGACATTGATGCTTTGGTCTCGCAA
*
113716 GAGAAGCCTTTCTTTCCATCGTTATTAATAG
128 GAGAAGCCTTTCTTTCCACCGTTATTAATAG
* * ** * * * * **
113747 AATCAAAGTTTGTCTTTTAAATAAGACAAACA-TAATACTCATACTAA-TC-CACATTCTTTTTT
1 AATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTA-AAAGTCTC-CATTCTTTTCA
* * * * * * * * *
113809 GGATTAGGCACCATAAACATAGTC--T-AATAGGGACACATGATAATGATGCTTTGGAT-TCGCA
64 AGATTAGGAACCAAAAACAAATTCTTTCATTA-GGATACATGACATTGATGCTTTGG-TCTCGCA
* *** * *** * *
113870 AGA-AA-CGCTTCCCCCCCCCCCCCCAATT-TTTG
127 AGAGAAGC-CTT--TCTTTCCACCGTTATTAATAG
* * * * * * * *
113902 TAATGTATAAG-TT-CATTCCTCAAATGAGACA-GACATTGATTCTAGT-AAGGATCTTCTTTCA
1 -AAT-CA-AAGTTTGTATT--TTAAATGAGACATG-CATTGATTCTCGTAAAAG-TCTCCATTCT
** * * * * * * * ** *
113963 TTTCGGGATTAGGCACTATAAACACATT-TTCCTCATTAGGTTACATGATATTGATGGTTTTCTT
59 TTTCAAGATTAGGAACCAAAAACAAATTCTT--TCATTAGGATACATGACATTGATGCTTTGGTC
* * * * * ** *
114027 TTGCATG-GAAATCTTTTCTTT--GCC-TTATTTTCCTTAA
122 TCGCAAGAG-AAGCCTTTCTTTCCACCGTTA--TT-AATAG
*
114064 AATCAAATTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
1 AATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
114129 ATT-GAGAACCAAAAACAAATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAG
66 ATTAG-GAACCAAAAACAAATT-CTTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAG
114193 AGAAGCCTTTCTTTCCACCGTTATTAATAG
129 AGAAGCCTTTCTTTCCACCGTTATTAATAG
* *
114223 AATCAAAGTTTGTCTTTTAAATAAGACA
1 AATCAAAGTTTGTATTTTAAATGAGACA
114251 AACATAATAC
Statistics
Matches: 1026, Mismatches: 313, Indels: 234
0.65 0.20 0.15
Matches are distributed among these distances:
153 2 0.00
154 18 0.02
155 55 0.05
156 35 0.03
157 31 0.03
158 278 0.27
159 377 0.37
160 131 0.13
161 30 0.03
162 54 0.05
163 13 0.01
164 2 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (158 bp):
AATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
ATTAGGAACCAAAAACAAATTCTTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAGAG
AAGCCTTTCTTTCCACCGTTATTAATAG
Found at i:116435 original size:158 final size:156
Alignment explanation
Indices: 115814--118337 Score: 497
Period size: 159 Copynumber: 15.9 Consensus size: 156
115804 TAAATTCTAT
* * * * * * *
115814 GTTCATGCCACAAGTGACACAAACATGGATCCTAGTAAGGATCTTCATTCATTTCGTGATTAAGC
1 GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA-GATCTCCATTCATTTCGTGATTAGGC
* * * * * * * * * *
115879 ACTATAAACACAATCTCCTTATCACGATACATTATATTGATGGTTTTCTTTTGCATGGAAATCTT
65 ACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTGCTTTTGGATGAAAATCTT
**
115944 TTCTTTGCCTTATTTTCCATAAAATCAAA
130 TTCTTTGCCTTATTTT-TGTAAAAT-AAA
** * * * * * * * * *** *
115973 GTTTGTACTTTAAATGAGACAAGCATTGATTCTTGTAAAAGTCTCCAATT-GTTTTAAGATTGGG
1 GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGA-TCTCC-ATTCATTTCGTGATTAGG
* * * ** * * * * * * *
116037 AACCAAAAACACATTC-CCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAAAAGC
64 CACCATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTGCTTTTGGATGAAAATC
* * * *
116101 TTGTCTTT-CCACTATTATTGATAGAATCAAA
128 TTTTCTTTGCC-TTATTTTTG-TAAAAT-AAA
* * * * * *
116132 GTT--TGCCTCATAAATAAGACAAACTTGAATACTTATGCT-A-ATC-CACATTCTTTTCCG-GA
1 GTTCATTCCTC--AAATGAGACAAACATGGATTC-TA-G-TAAGATCTC-CATTCATTT-CGTGA
* * * * * * * * *
116191 TTAGGCACCATAAACATAGTCTTCTCATAAGGATAAATGATATTGATGCTTTGGTTTCGCAAGAA
59 TTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTGCTTTTGGATGAA
** ** ** *
116256 ACGC-TTTCTTCCCCCCAATTTTTGTAAAGTATAA
124 AATCTTTTCTT-TGCCTTATTTTTGTAAAATA-AA
* * *
116290 GTTCATTCCTCATATTAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGC
1 GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA-GATCTCCATTCATTTCGTGATTAGGC
* * *
116355 ACTATAAACAGATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGGATGAAAATCTT
65 ACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTGCTTTTGGATGAAAATCTT
*
116420 TTCTTTGCCTTATTTTCTTTAAAATCAAA
130 TTCTTTGCCTTATTTT-TGTAAAAT-AAA
** * * * ** * * * * **
116449 GTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCACTC-TTTCCAAGATTAGG
1 GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGA-TCTCCATTCATTT-CGTGATTAGG
* * * * * * *
116513 -ATCCAAAAACACTTTC-CCTTCATTAGGATAAATGACATTGA-GGCTTTGGTGTTGCAAGAAAA
64 CA-CCATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGG-TTTGCTTTTGGATGAAAA
* * * ** **
116575 GCTTTTTTTTCCACCGA-TAATGATAAAATAAA
126 TCTTTTCTTTGC-CTTATTTTTG-TAAAATAAA
* * * * * * *
116607 GTT--TGTCTCTTAAATAAGACAAACATGAATACACATACTAA-TTC-CCATTCTTTTCAG-GAT
1 GTTCAT-TC-CTCAAATGAGACAAACATGGAT--TC-TAGTAAGATCTCCATTCATTTC-GTGAT
* * * * * * * *** *
116667 TAGGCACCATAAACATAGTCTTCTCATTAGGATAAAGGTTATTGATGATTTGGTTTCCTA-GGAA
60 TAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTGCTTTTGGATGAAA
* * * * *
116731 ATGCTTTT-TTCGCCCTAATTTTTGTAAATTCTAT
125 AT-CTTTTCTTTG-CCTTATTTTTGTAAAAT-AAA
* * *
116765 GTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGT
1 GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA-GATCTCCATTCATTTCGTGATTAGGC
* * * *
116830 ACTATAAACACATTCTCCTTAATAGGATAAATGATATTGATGGTTTTCTTTTGCG-TGAAAATCT
65 ACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTGCTTTTG-GATGAAAATCT
116894 TTTCTTTGCCTTATTTTCCT-TAAAATCAAA
129 TTTCTTTGCCTTATTTT--TGTAAAAT-AAA
* ** * * * ** *
116924 GTTTGTATT-CT-AAATGAGACATGCATTGATTCTCGTAA-ATGTCTCCATTCTTTTCAAGCTT-
1 G-TT-CATTCCTCAAATGAGACAAACATGGATTCTAGTAAGA--TCTCCATTCATTTCGTGATTA
* * * * * * * * * * *** *
116985 GAGAACTAAAAACACATTC-CTTTCATT-GGAATACATGACATTGGTGCTTTGGTGTCACATGAG
62 G-GCACCATAAACACATTCTC-CTCATTAGG-ATAAATGATATTGATGGTTTGCTTTTGGATGAA
* * *** * *
117048 AAGCTTGTCTTT-CCACCGTTATTGATAGAATCAAA
124 AATCTTTTCTTTGCC-TTATTTTTG-TAAAAT-AAA
* * * * * *
117083 ATT--TGTCTCTTAATTAAGACAAACATGAATAT-TCA-TACCA-ATC-CACATTCTTTTC-TGG
1 GTTCAT-TC-CTCAAATGAGACAAACATGGAT-TCT-AGTA--AGATCTC-CATTCATTTCGT-G
* * * * * * * * * * * *
117141 ATTAGGCACCATAAAAATAGTCTTCTCATAAAGATACAGGATATTGCTGATTTGGC-TTTGCAAG
58 ATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTT-GCTTTTGGATG
* * ** * *
117205 AAACTC-TTT-TTTCCCAGCAATTTTTGTAAATTCTAA
122 AAAATCTTTTCTTTGCC--TTATTTTTGTAAAAT-AAA
* * * * * * * *
117241 GTTCGTGCCTCAAATGAGACAGACATGGATTCTAGTAAGGATCTTCATTCATTTCATAATTGGGA
1 GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA-GATCTCCATTCATTTCGTGATTAGGC
* * * ** * *
117306 ACTATAAACACATTCTCCTCATTCA-GATACATGATATTGATGGTTTTCTTTTGCCTGGAAATCA
65 ACCATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGGTTTGCTTTTGGATGAAAATCT
*
117370 TTTCTTTGCATTATTTTCCT-TAAAATCAAA
129 TTTCTTTGCCTTATTTT--TGTAAAAT-AAA
** * * * ** * * * * ** *
117400 GTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTCCCAAGATTGGG
1 GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGA-TCTCCATTCATT-TCGTGATTAGG
* * * * * * * * * * * * * *
117464 AACTAAAAACACATTAC-CTTCATTAGGATACATGACATTGATGTTTTGGTATCGTAAGAGAAGC
64 CACCATAAACACATT-CTCCTCATTAGGATAAATGATATTGATGGTTTGCTTTTGGATGAAAATC
*** **
117528 TTTTCTTT-CCACCGTTAATGATAAAATCAAA
128 TTTTCTTTGCC-TTATTTTTG-TAAAAT-AAA
* * * * * * * **
117559 GTTTATCTCCT-AAATAAGACTAACATGAATACTCA-TACTA-ATCCCCATTCTTTTCAAGATTA
1 GTTCAT-TCCTCAAATGAGACAAACATGGATTCT-AGTA--AGATCTCCATTCATTTCGTGATTA
* * * * * * * * * * * *
117621 GGCACCGTAAACATAGTCTTCTCATAAGGATACATGATATTAATGATTTGGTTTCGCAAGAAACG
62 GGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTGCTTTTGGATGAAA--
* * *
117686 A-C--TT-TTT-CCTATCAATTTTTGTAAATTCTAT
125 ATCTTTTCTTTGCCT-T--ATTTTTGTAAAAT-AAA
* ** * * * * *
117717 GTTCGTGGCTCAATTGAGACAAACATGGATTCTACTAAGGAGCTTCATTCATTTCGTGATTAGAC
1 GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA-GATCTCCATTCATTTCGTGATTAGGC
* * * * * *
117782 ACTATAAACATATTCTGCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGCATGAAAATCTT
65 ACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTGCTTTTGGATGAAAATCTT
117847 TTCTTTGCCTTATTTTCCT-TAAAATCAAA
130 TTCTTTGCCTTATTTT--TGTAAAAT-AAA
* * *** * * * * * * *** *
117876 GTT--TTACTTTAAATGAGACATGGATTGAGTCTCGTAAAAGTCTCCAATCTTTTCAAAATTGGG
1 GTTCATT-CCTCAAATGAGACAAACATGGATTCTAGTAAGA-TCTCCATTCATTTCGTGATTAGG
* * * * * * *** * * * * *
117939 AACCAAAAACACATT-TCTTTCATTAGGATACATGACATTGATGCTTTGGGGTCGCAAGAGAAGC
64 CACCATAAACACATTCTC-CTCATTAGGATAAATGATATTGATGGTTTGCTTTTGGATGAAAATC
* * * *
118003 TTTTCTTT--C-TACCATTATGGACGGAATCAAA
128 TTTTCTTTGCCTTA--TTTTTGTA--AAAT-AAA
* * * * * ** *
118034 GTT--TGTCACTTAAATAAGACAAACATGAATACTCA-TACTA-ATCCCCATTGTTTTTAG-GAT
1 GTTCAT-TC-CTCAAATGAGACAAACATGGATTCT-AGTA--AGATCTCCATT-CATTTCGTGAT
* * * * * * *** *
118094 TAGGCACCATAAACACAGTCTTCTCATAAAGATACAA-GATATTGATGCTTTGGTTTCACAAGAA
60 TAGGCACCATAAACACATTCTCCTCATTAGGATA-AATGATATTGATGGTTTGCTTTTGGATGAA
** ** * *
118158 ACA-C-TTTCTTCCCACCAATTTTTGTAAATTCTAA
124 A-ATCTTTTCTTTGC-CTTATTTTTGTAAAAT-AAA
* * * * * *
118192 GTTCGTGCGTCCAATGAGACAGACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGC
1 GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA-GATCTCCATTCATTTCGTGATTAGGC
* * * * *
118257 ACTATAAACAGATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTT
65 ACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTGCTTTTGGATGAAAATCTT
118322 TTCTTTGCCTTATTTT
130 TTCTTTGCCTTATTTT
118338 ACTTAAAATC
Statistics
Matches: 1685, Mismatches: 521, Indels: 319
0.67 0.21 0.13
Matches are distributed among these distances:
155 10 0.01
156 11 0.01
157 56 0.03
158 718 0.43
159 812 0.48
160 59 0.04
161 17 0.01
162 2 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (156 bp):
GTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGATCTCCATTCATTTCGTGATTAGGCA
CCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTGCTTTTGGATGAAAATCTTT
TCTTTGCCTTATTTTTGTAAAATAAA
Found at i:118614 original size:22 final size:22
Alignment explanation
Indices: 118587--118630 Score: 88
Period size: 22 Copynumber: 2.0 Consensus size: 22
118577 ATAAACATAG
118587 TCTTCTCATAAGGATAAAGGAT
1 TCTTCTCATAAGGATAAAGGAT
118609 TCTTCTCATAAGGATAAAGGAT
1 TCTTCTCATAAGGATAAAGGAT
118631 ATTCATGATT
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
22 22 1.00
ACGTcount: A:0.36, C:0.14, G:0.18, T:0.32
Consensus pattern (22 bp):
TCTTCTCATAAGGATAAAGGAT
Found at i:122162 original size:158 final size:157
Alignment explanation
Indices: 119543--139335 Score: 721
Period size: 159 Copynumber: 125.4 Consensus size: 157
119533 TTCAGGATTG
* * * * * * * *
119543 GGCACCATAAACATAGTC-CTCACATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAA-
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * * ** *
119606 CGCTTT-TTTCCCATCAATTTCTGTAAATTCTATGTTCATGCCTCAAATGAGACAAACATTGATT
65 CG-TTTCTTTGCC-T-TATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * *
119670 CTAGTAA-AGATCTTCATTCATTTCGTGATTA
127 CCAGTAAGA-ATCTCCATTCATTTCGTAATTA
* * * * * * * ** *
119701 AGCACTATAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAA
1 GGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAA
* * * * * ** *
119765 TCATTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
64 TCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
** ** * *
119829 CTTGTAA-AAGTCTCCATTTGTTT-GAAGATTG
127 CCAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * ** * * * *
119860 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAAA-A
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAATC
* * * * * *
119924 GCTTGTCTTT-CCGCTGTTATTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAACATGAA
66 G-TT-TCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGA
* * *** * *
119986 TACTTA-TCCTAATC-CACATTCTTTTC-TGGATTA
125 TTC-CAGTAAGAATCTC-CATTCATTTCGT-AATTA
* * * * *
120019 GGCACCATAAACATAGTCT-TCTCATAAGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAA-
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
** ** * ** * ** *
120082 CGCTTTCTTCCCCCCAATTTTTGTAAAGT-ATAAGTTCATTCCTCATTTTAGACAAACATGGATT
65 CG-TTTCTT-TGCCTTATTTTTGTAAATTCA-AAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * *
120146 CTAGTAAGGATCTTCATTCATTTCGTGATTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * ** * * *
120177 GGGACTATAAACAGATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGGATGAAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* * * * * ** *
120242 CTTTTCTTTGCCTTATTTTACT-TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* **
120306 TC-GTAA-AAGTCTCCACTC-TTTCCAAGATTA
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * *
120336 GG-ATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGA-GGCTTTGGTGTT-GCAAGAA
1 GGCA-CCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGG-TTTGGT-TTCGC-AGGA
* * * * ** ** * * * * **
120398 AAGCTTTTTTTTCCACCGA-TAATGATAAAAT-AAAGTATGT-CTCTTAAATAAGACAAACATTA
62 AATCGTTTCTTTGC-CTTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGG
* ** * *
120460 ATACTCA-TACTAAT-TCCCATTCTTTTCAG-GATTA
124 ATTC-CAGTAAGAATCT-CCATTCATTTC-GTAATTA
* * * * * *
120494 GGCACCATAAACATAGTCT-TCTCATTAGGATAAAGGTTATTGATGATTTGGTTTCGTAGGAAAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * * **
120558 -GCTTT-TTTCCCCCTAATTATTGTAAATTCTATGTTCATGCCTCAAATGAGACAAACATGGATT
65 CG-TTTCTTT--GCCTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
** * * *
120621 CTTGTAAGGATCTGCATTCATTTCGTGATTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
* ** * * **
120652 GGCACTATAAGTACATTCTCCTC-TTCAGGATATATGATATTGATGGTTTTCTTTTGCGC-GGAA
1 GGCACCATAAACACATTCTCTTCATT-AGGATAAATGATATTGATGG-TTTGGTTT-CGCAGGAA
* * *** * * ** *
120715 ATCTTTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTGTATTTTAAGTGAGACATGCATTGAT
63 ATCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGAT
*
120779 TCTC-GTAA-AAGTCTCCATTC-TTT-GCAAGCTT-
126 TC-CAGTAAGAA-TCTCCATTCATTTCGTAA--TTA
* * * * * * * * *
120810 GAGAACCAAAAACACATTC-CTTTCATTGGGATACATGACATTGATGCTTTGGTGTCACAAGAGA
1 G-GCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-A
* *** * * * * *
120874 AGC-TTGTCTTT-CCACCGTTATTGATAGAA-TCAAAATTTGT-CTCTTAATTAAGACAAACATG
63 ATCGTT-TCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATG
* * ** * *
120935 AATATTCA-TACCAATC-CACATTCTTTTC-TGGATTA
123 GAT-TCCAGTAAGAATCTC-CATTCATTTCGT-AATTA
* * * * * * * * * * *
120970 GGCACCGTAAAAATAGTCT-TCTCATAAAGATACAGGATATTGCTGATTTGGCTTT-GCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGG-TTTCGCAGGAAA
* ** * * *
121033 CTC-TTT-TTTCCCAACAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAGACATGGAT
64 -TCGTTTCTTTGCC--TTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGAT
* * * *
121096 TCTAGTAAGGATCTTCATTCATTTCGTAATTG
126 TCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * ** * *
121128 GGCACTATAAACACATTCTCCTCATTCGGATACATGATATTGATGGTTTTCTTTTGCCTGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCG-CAGGAAAT
* * * * * * ** *
121193 CATTTCTTTGCATTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
** *
121257 TC-GTAA-AAGTCTCCATTC-TTTCCAAGATTG
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * * * * * *
121287 GGAACTAAAAACACATTAC-CTTCATTAGGATACATGACATTGATGCTTTGGTATCGTAAGAGAA
1 GGCACCATAAACACATT-CTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-AA
* * *** ** * * * *
121351 GCTTTTCTTT-CCACCGTTAATGATAAATTCAAAGTTTAT-CTCTTAAATAAGACAAACATGAAT
64 TCGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGAT
* ** * *
121414 ACTCA-TACTAAT-TCCCATTCTTTTCAG-GATTA
126 TC-CAGTAAGAATCT-CCATTCATTTC-GTAATTA
* * * * * *
121446 GGCACCATAAACATAGTCT-TCTCATTAGGATAAAGGTTATTGATGATTTGGTTTCGTAGGAAAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * * **
121510 -GCTTT-TTTCCCACTAGTTTTTATAAATTCTATGTTCATGCCTCAAATGAGACAAACATGGATT
65 CG-TTTCTTTGCC-TTA-TTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * ** * *
121573 CTAGTAAGGATCAGCATTCATTTCATGATTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
** * ** * *
121604 GGCAGTATAAACACATTCTCCTT-AATAGGATAAATGATATTGATGGTTTTCTTTTGCGTGGAAA
1 GGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGC-AGGAAA
* * * * * * ** *
121668 TCTTTTCTTTGCCTTATTTTCGTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTC
64 TCGTTTCTTTGCCTTATTTTTG-TAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
** * * * *
121733 TTGCAA-AAGTCCCCATTCGTTT--TAAGACTA
128 CAGTAAGAA-TCTCCATTCATTTCGT-A-ATTA
* * * ** * * * *
121763 GGAACCA-AAACACATTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGCAAGAGAAG
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-AAT
* ** *** * * * * **
121827 CTTTTCTTT-CCACCATTAACGATAAAATCAAAGTTTGT-CTCTAAAATAAGACAAACATGAACA
65 CGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGATT
** * *
121890 CTCA-TACTAAT-TCCTATTCTTTTCAG-GATTA
127 C-CAGTAAGAATCTCC-ATTCATTTC-GTAATTA
* * * * * * * *
121921 GGCACCGTAAACATAGTCT-TCTCATAAGGATAAAGGATATTGATGATTTGGTTTCACAAGAAAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * *
121985 -GTTTTTTTCCCACTAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTC
65 CGTTTCTTT-GC-CTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* *
122049 CAGTAAGGATCTGCATTCATTTCGTAATTA
128 CAGTAAGAATCTCCATTCATTTCGTAATTA
* * * ** *
122079 GGCACAATAAACACATTCTCTTAAATAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* * *** * * ** *
122144 CGTTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTATATTTTAAATCAGACATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
*
122208 GC-GTAA-AAGTCT-C---CATTTC-AAGATTGA
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATT-A
* * * * * * ** * **
122235 GAC-CCAAAAAAACATTC-CTTTCATTAGAATACATGACATTGATACTTTGGTCTCGCAAAAGAA
1 GGCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-AA
* * * * * ** * * *
122298 GCTTTTGTTTCCACTGT-TATTAATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAACATGAA
64 TCGTTTCTTTGC-CT-TATTTTTGTA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGA
* ** ** *
122360 TACTCA-TACTAATC-CACATTC-TTTTTTGGATTA
125 TTC-CAGTAAGAATCTC-CATTCATTTCGT-AATTA
* * * * * * * * *
122393 GGCACCATAAACATAGTCT-TCTCATAAGGATACATGATAATGATGCTGTGGATTCGCAAGAAA-
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
** ** ** ** * *
122456 CGCTTT-TTCCCACCAATTCCTGT-AATGT-ATAAGTTCATTCCTCAAATGAGACAGACATGGAT
65 CG-TTTCTTTGC-CTTATTTTTGTAAAT-TCA-AAGTTTGTGCCTCAAATGAGACAAACATGGAT
* * * * *
122518 TCTAGTAAGGATCTTCTTTCATTTCAG-GATTA
126 TCCAGTAAGAATCTCCATTCATTTC-GTAATTA
** * * * * ** *
122550 GGCATTATAAATACTTTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTT-GC-----CTC
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAATC
* * *** * * ** *
122609 --AT-TTT-CCTTA-------AAA-TAAAAGTTTGTATTTTAATTGAGACATGCATTGATTCTC-
66 GTTTCTTTGCCTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC-CA
*
122661 GTAA-AAGTCTCCATTC-TTTC-TAACATA
130 GTAAGAA-TCTCCATTCATTTCGTAA-TTA
* * * * * * * *
122688 GGGAACCAAAAATACATTC-CTTTCATTAGGA-AACATGACATTGATGCTTTGGTGTCACAAGAG
1 -GGCACCATAAACACATTCTC-TTCATTAGGATAA-ATGATATTGATGGTTTGGTTTCGCAGGA-
* * **** ** * *
122751 AAGCTTTTCTTT-CCACCGCTAATGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGAC--ACATG
62 AATCGTTTCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATG
* * ** * ** *
122811 AATACTCA-TACTAGTC-CGCATTC-TTTTTTGGATTA
123 GATTC-CAGTAAGAATCTC-CATTCATTTCGT-AATTA
* * ** * * * * *
122846 GGCACCATAAACATAGTCT-TCTCACAAGGATACATGATAATGATGCTTTGGATTCGCAAGAAA-
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
** ** * ** * *
122909 CGCTTT-TTCCCCCCAATTTTTGT-AATGT-ATATGTTCATTCCTCAAATGAGACAGACATGGAT
65 CG-TTTCTT-TGCCTTATTTTTGTAAAT-TCA-AAGTTTGTGCCTCAAATGAGACAAACATGGAT
** * * * *
122971 TCTGGTAAGGATCTTCTTTCATTTC-TGGATTA
126 TCCAGTAAGAATCTCCATTCATTTCGT-AATTA
* ** * * * ** *
123003 GGTATTATAAACACTTTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCCTA-GAAA
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCG-C-AGGAAA
* * * * * * * ** *
123067 TCTTTTCTTTACCTTATTTTCCT-TAAAATCAGAGTTT-T-CATTTTAATTGAGACATGCATTGA
64 TCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGC--CTCAAATGAGACAAACATGGA
*
123129 TTCTC-GTAA-AAGCCTCCATTC-TTTC-TAATATA
125 TTC-CAGTAAGAA-TCTCCATTCATTTCGTAAT-TA
* * * * * * *
123161 GAGAACCA-AAGACACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCACCAGAA
1 G-GCACCATAA-ACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGTTTC-GCAGGA
* * * * * *
123224 AAGT-TTTTGTTTCCACCGTTA--ATTATAGAA-TCAAAG-TTGT-CTCTTAAAT-ACGACAAAC
62 AA-TCGTTTCTTT--GCC-TTATTTTTGTA-AATTCAAAGTTTGTGC-CTCAAATGA-GACAAAC
* * ** * *
123282 ATGAATACCCA-TACTAATCCCCATTC-TTT-TTAGGATTA
120 ATGGAT-TCCAGTAAGAATCTCCATTCATTTCGTA--ATTA
* ** * * * * *
123320 GGCACCATAAGCGTAGTCT-TCTCATAAGGATACATGATATTGATGCTTTGGTTTCGC-GAGATA
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAG-GAAA
** * * * ** **
123383 T-GCTTTC-TT-CCAAACAATTTGTGTAAAGT-ATGAGTTCATTTCTCAAATGAGACAAACATGG
64 TCG-TTTCTTTGCC---TTATTTTTGTAAATTCA-AAGTTTGTGCCTCAAATGAGACAAACATGG
** * * * * **
123444 ATTCTTGTAGGGATTTTCATTCATTTCGGGATTA
124 ATTCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * ** *
123478 GGCACTATAAACACATTCTCCTT-TTTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAA
1 GGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAA
* * * * * ** *
123542 TCTTTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
64 TCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* **
123606 CTCA-TAA-AAGTCTCCACTC-TTTCCAAGATTA
127 C-CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * * * * * **
123637 TG-ATCCAAAAACACTTTCCCTTCATCAGGATGAATGATACT-ATTGCTTTGGTGTT-GCAATAG
1 GGCA-CCATAAACACATTCTCTTCATTAGGATAAATGATATTGA-TGGTTTGGT-TTCGCAGGA-
* * * * *** ** * * * * * *
123699 AAGCTTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTAT-CTCTTAAATAAGATAAACATGA
62 AATCGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGG
* ** * *
123763 ATACTCA-TACTAAT-TCCCATTCTTTTCCG-GATTA
124 ATTC-CAGTAAGAATCT-CCATTCATTT-CGTAATTA
* * * * * * * ** * *
123797 GGCACCATAGACATAGTCT-TCTCATAAGAATAAAGGATACTGATCATTTGGTTTTGCAAGAAA-
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * * * *
123860 CATTTTTTTTCCACTAATTTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATT
65 C-GTTTCTTTGC-CTTA-TTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * * *
123925 CTAGTAAGGATCTGCATTCATTTCATGATTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * ** *
123956 GGCACTATAAACACATTCTCTTAAATAGGATAAATGTTATTGATGGTTTTCTTTTGCATGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* * * * *** * * ** *
124021 CATTTCTTTGCCTTATTTTCCT-TAAAATCAAAGCTTATATTTTAAATGGGACATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* * *
124085 AAGTAA-AAGTCTCCATTCTTTTC-AAGATTGA
128 CAGTAAGAA-TCTCCATTCATTTCGTA-ATT-A
* * * * * * ** * * * *
124116 GAC-CCAAAAACACATTCTTTTCATTAGAATACATGACATTGATACTTTGGTCTAGCAAGAGAAG
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-AAT
* * ** * * *
124180 CTTTTCTTTCCACCGTTA--TTAATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAACATGAA
65 CGTTTCTTT--GCC-TTATTTTTGTA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGA
** ** * ** *
124241 CACTCA-TACTAATC-CATATTC-TTTTTTGGATTA
125 TTC-CAGTAAGAATCTC-CATTCATTTCGT-AATTA
** * * * *
124274 GGCACCAT-AA-ACATAGTCTTC--T--CAT-AAGGATA--CA---------TTCGCAAGAAATG
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT-
* ** *** ** ** ** * * *
124321 C-TTTTTTCCCCCAGTTTTTGTAATGTATAAGTTCATTCCTCAAATGAGACAGACATGGATTCTA
65 CGTTTCTTTGCCTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTCCA
* * *
124385 GTAAGGATCTTCTTTCATTTCG-AGATTA
130 GTAAGAATCTCCATTCATTTCGTA-ATTA
*** * * * * * ** * *
124413 GGCATTTTAAACACCTTCTCCTCATTAGGGTAAATGATATTAATGATTTTCTTTTGCTTGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGC-AGGAAAT
* * * * *** * * ** *
124478 CTTTTCTTTGCCTCATTTTCCT-TAAAATCAAAGATTGTATTTTAATTGAGACATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* *
124542 TC-GTAA-AAGTCTACATTCA-TTC-TAACATA
128 -CAGTAAGAA-TCTCCATTCATTTCGTAA-TTA
* * * * * *
124571 GGGAACCAAAAATACATTC-CTTTCATTAGGATACAA-GATATTGATGCTTTGGTGTCGCAAGAT
1 -GGCACCATAAACACATTCTC-TTCATTAGGATA-AATGATATTGATGGTTTGGTTTCGCAGGA-
* * * *** ** * *
124634 AAGCTTTTC-TTCCCACCGTTAATGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAACATG
62 AATCGTTTCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATG
* * ** * * *
124696 AATACTCA-TACTAAT-TCCCATTCTTTTCAG-GACTA
123 GATTC-CAGTAAGAATCT-CCATTCATTTC-GTAATTA
* * * * * * *
124731 GGCACCATAAACATAGTCT-TCTCATAAGGATAAAGGATATTGATGATTTCGTTTCGCAAGAAAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * * * *
124795 -GCTTT-TTTCCCACTAATTTTTGTAAATTCTATGTTCGTGTCTCAAATAAGACAAACATGGATT
65 CG-TTTCTTT-GC-CTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * * ** *
124858 CTAGTAAGGATCTTCTTTCATTTCGGGATAA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
** * * * * ** * *
124889 GGCATTATAAACACTTTCTCCTCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCTTGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGC-AGGAAAT
* * ** * **** * * ** *
124954 CTTTTCTTTGCCTCATTTTCCCTAAAATCAAAGTTTGCATTTTAATTGAGACATGCATTGATTCT
65 CGTTTCTTTGCCTTATTTT-TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC-
* * *
125019 C-GTAA-AGGTCTCCATTCTTTTC-AAGATTA
128 CAGTAAGA-ATCTCCATTCATTTCGTA-ATTA
* * * * * *
125048 GG-ATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTT-GCAAGAGA
1 GGCA-CCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGT-TTCGCAGGA-A
* * * * *** ** * * ** *
125111 AGCTTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAAAAAGACAAACATGAA
63 ATCGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGA
* ** * * *
125175 TACTCA-TACTAATCCCCATTCTTTTCAG-GATTA
125 TTC-CAGTAAGAATCTCCATTCATTTC-GTAATTA
* * * * ** * * *
125208 GGCTCCATAAACATAGTCT-TCTCATAAGGATGCAGGATATTGATGATTTGGTTAT-GCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTT-TCGCAGGAAA
* * * * * * * *
125271 -CGTTT-TTTCCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATAGTTT
64 TCGTTTCTTTGCC-T-TATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * ***
125334 CTAGTAAGGATCTTCATTCATTTCGGGGTTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * * * ** *
125365 GGCACAATAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAA
1 GGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAA
* * * * * * *
125429 TCTTTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATT
64 TCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
** * * *
125493 CTTGCAA-AAGTCTCCATTCGTTT--TAAGATTG
127 CCAGTAAGAA-TCTCCATTCATTTCGT-A-ATTA
* * * * ** * *
125524 GGAACCAAAAACATATTGC-CTTCATTAGGATACATGACGTTGATGCG-TTGGTGTCGCAAGAAA
1 GGCACCATAAACACATT-CTCTTCATTAGGATAAATGATATTGATG-GTTTGGTTTCGCAGGAAA
* *** * * * * *
125587 -AGCTTGTCTTT-CCACCGTTATTGATAGAA-TCATAGTTTG-ACTCTTAAATAAGACAAACATG
64 TCG-TT-TCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATG
* * * * *
125648 AATACTCATGCTAATGCA--T--ATTCTTTTC-TGGATTA
123 GATTC-CA-G-TAA-GAATCTCCATTCATTTCGT-AATTA
* * * * *
125683 GGCACCGTAAACATAGTCT-TCTCA-TAGGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTA-GGATAAATGATATTGATGGTTTGGTTTCGCAGGAAA
* * * * * * *
125746 -CGCTTTCTTTCCCTCAATTTTTGTAAAGT-ATAAG-TTGATTCCTAAAATTAGACAGACATGGA
64 TCG-TTTCTTTGCCT-TATTTTTGTAAATTCA-AAGTTTG-TGCCTCAAATGAGACAAACATGGA
* * * *
125808 TTCTAGTAAGGATCTTCATTCATTTCGTGATTA
125 TTCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * ** * *
125841 GGCACTATAAACAGATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* * * * * * * * ** *
125906 CTTTTCTTTGACTTATTTTACT-TAAAATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* ** *
125970 TC-GTAA-AAGTCTCCACTC-TTTCCAAGATTT
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * *
126000 GG-ATCCA-AAACCACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTT-GCAAGAA
1 GGCA-CCATAAA-CACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGT-TTCGC-AGGA
* * * * *** ** * *
126062 AAGCTTTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAAT-ATGACAAACAT
62 AATC-GTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGA-GACAAACAT
* * ** *
126125 GAATACTCA-TACTAAT-TCCCATTC-TTT-TTAGGATTA
122 GGATTC-CAGTAAGAATCT-CCATTCATTTCGTA--ATTA
* * * * * * ** *
126161 GGCTCCATAAACATAGTCT-TCTCATAAGGATAAAGGATATTGATGATTTCATTTCGCAAGAAAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * * *
126225 -GCTTT-TTTCCCACTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACAAACATGGATT
65 CG-TTTCTTT-GC-CTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * * **
126288 CTAGTAAGGATCTTCTTTCATTTCGGGATTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
** * * * * ** * *
126319 GGCATTATAAACACTTTCTCCTCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCG-CAGGAAAT
* * ** * * * * ** *
126384 CTTTTCTTTGCCTCATTTTCCCTAAAATCAAAG--TGTGCATTTTAATTGAGACATGCATTGATT
65 CGTTTCTTTGCCTTATTTT-TGTAAATTCAAAGTTTGTGC--CTCAAATGAGACAAACATGGATT
* * *
126447 CTC-GTAA-AGGTCTCCATTCTTTTC-AAGATTA
127 C-CAGTAAGA-ATCTCCATTCATTTCGTA-ATTA
* * * * * * *
126478 GG-ATCCAAAAACACTTTC-CATTCAGTAGGATAAATGACATTGATGCTTTGGTGTT-GTAAGAG
1 GGCA-CCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGT-TTCGCAGGA-
* * * * *** ** * *
126540 AAGCATTTTTTTTCCACCGTTAATGATAAAATT-AATGTTTGT--CTCGTAAATAAGACAAACAT
62 AATCGTTTCTTTGCC-TTATTTTTG-T-AAATTCAAAGTTTGTGCCTC--AAATGAGACAAACAT
* * ** * * * *
126602 GAATACTCA-TACTAATCCCCATTCTTTTCAG-GATTG
122 GGATTC-CAGTAAGAATCTCCATTCATTTC-GTAATTA
* * * * * * * *
126638 GGCACCATAAACATAGTC-CTCACATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAA-
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * * * ** * *
126701 CGCTTT-TTTCCCATCAATTTCTATAAATTCTATGTTCATGCCACAAATGACACAAACATGGA-T
65 CG-TTTCTTTGCC-T-TATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * *
126764 CCTAGTAAGGATCTTCATTCATTTCGTGATTA
127 CC-AGTAAGAATCTCCATTCATTTCGTAATTA
* * * * * * * ** *
126796 AGCACTATAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAA
1 GGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAA
* * * * * * * *
126860 TCTTTTCTTTGCATTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATT
64 TCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
** * * *
126924 CTTGCAA-AAGTCTCCATTCGTTT--TAAGATTG
127 CCAGTAAGAA-TCTCCATTCATTTCGT-A-ATTA
* * * * ** * *
126955 GGAACCAAAAACATATTGC-CTTCATTAGGATACATGACGTTGATGCG-TTGGTGTCGCAAGAAA
1 GGCACCATAAACACATT-CTCTTCATTAGGATAAATGATATTGATG-GTTTGGTTTCGCAGGAAA
* *** * * * * *
127018 -AGCTTGTCTTT-CCACCGTTATTGATAGAA-TCATAGTTTG-ACTCTTAAATAAGACAAACATG
64 TCG-TT-TCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATG
* * * * *
127079 AATACTCATGCTAATGCA--T--ATTCTTTTC-TGGATTA
123 GATTC-CA-G-TAA-GAATCTCCATTCATTTCGT-AATTA
* * * * *
127114 GGCACCGTAAACATAGTCT-TCTCA-TAGGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTA-GGATAAATGATATTGATGGTTTGGTTTCGCAGGAAA
* * * * * * *
127177 -CGCTTTCTTTCCCTCAATTTTTGTAAAGT-ATAAG-TTGATTCCTAAAATTAGACAGACATGGA
64 TCG-TTTCTTTGCCT-TATTTTTGTAAATTCA-AAGTTTG-TGCCTCAAATGAGACAAACATGGA
* * * *
127239 TTCTAGTAAGGATCTTCATTCATTTCGTGATTA
125 TTCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * ** * *
127272 GGCACTATAAACAGATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* * * * * * * ** *
127337 CTTTTCTTTGCCTTATTTTACT-TAAAATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* ** *
127401 TC-GTAA-AAGTCTCCACTC-TTTCCAAGATTT
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * *
127431 GG-ATCCA-AAACCACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTT-GCAAGAA
1 GGCA-CCATAAA-CACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGT-TTCGC-AGGA
* * * * *** ** * *
127493 AAGCTTTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAAT-ATGACAAACAT
62 AATC-GTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGA-GACAAACAT
* * ** *
127556 GAATACTCA-TACTAAT-TCCCATTC-TTT-TTAGGATTA
122 GGATTC-CAGTAAGAATCT-CCATTCATTTCGTA--ATTA
* * * * * * ** *
127592 GGCTCCATAAACATAGTCT-TCTCATAAGGATAAAGGATATTGATGATTTCATTTCGCAAGAAAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * * *
127656 -GCTTT-TTTCCCACTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACAAACATGGATT
65 CG-TTTCTTT-GC-CTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * * **
127719 CTAGTAAGGATCTTCTTTCATTTCGGGATTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
** * * * * ** * *
127750 GGCATTATAAACACTTTCTCCTCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCG-CAGGAAAT
* * ** * * * * ** *
127815 CTTTTCTTTGCCTCATTTTCCCTAAAATCAAAG--TGTGCATTTTAATTGAGACATGCATTGATT
65 CGTTTCTTTGCCTTATTTT-TGTAAATTCAAAGTTTGTGC--CTCAAATGAGACAAACATGGATT
* * *
127878 CTC-GTAA-AGGTCTCCATTCTTTTC-AAGATTA
127 C-CAGTAAGA-ATCTCCATTCATTTCGTA-ATTA
* * * * * *
127909 GG-ATCCAAAAACACTTTC-CATTCAGTAGGATAAATGACATTGATGCTTTGGTGTT-GTAAGAG
1 GGCA-CCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGT-TTCG-CAG-G
* ** * * *** ** * ** * **
127971 AAGCTTTTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTGTTTCTTAAAAAAGACAAACATG
61 AA-ATCGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATG
* * ** * ** *
128036 AATACTCA-TACTAATCCCCATTTTTTTCAG-GATTA
123 GATTC-CAGTAAGAATCTCCATTCATTTC-GTAATTA
** * * * * ** * * *
128071 GGCTTCGTAAACATAGTCT-TCTCATAAGGATGCAGGATATTGATGATTTGGTTAT-GCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTT-TCGCAGGAAA
* * * * * *
128134 -CGCTTT-TTTCCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATGGA-
64 TCG-TTTCTTTGCC-T-TATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGAT
* * * *
128196 TCCTAGTAAGGATCTTCATTCATTTCATGATTA
126 TCC-AGTAAGAATCTCCATTCATTTCGTAATTA
* * * * * * * ** *
128229 AGCACTATAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAA
1 GGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAA
* * * * * * * *
128293 TCTTTTCTTTGCATTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATT
64 TCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
** * * *
128357 CTTGCAA-AAGTCTCCATTCGTTT--TAAGATTG
127 CCAGTAAGAA-TCTCCATTCATTTCGT-A-ATTA
* * * * ** * *
128388 GGAACCAAAAACATATTGC-CTTCATTAGGATACATGACGTTGATGCG-TTGGTGTCGCAAGAAA
1 GGCACCATAAACACATT-CTCTTCATTAGGATAAATGATATTGATG-GTTTGGTTTCGCAGGAAA
* *** * * * * *
128451 -AGCTTGTCTTT-CCACCGTTATTGATAGAA-TCATAGTTTG-ACTCTTAAATAAGACAAACATG
64 TCG-TT-TCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATG
* * * * *
128512 AATACTCATGCTAATGCA--T--ATTCTTTTC-TGGATTA
123 GATTC-CA-G-TAA-GAATCTCCATTCATTTCGT-AATTA
* * * * *
128547 GGCACCGTAAACATAGTCT-TCTCA-TAGGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTA-GGATAAATGATATTGATGGTTTGGTTTCGCAGGAAA
* * * * * * *
128610 -CGCTTTCTTTCCCTCAATTTTTGTAAAGT-ATAAG-TTGATTCCTAAAATTAGACAGACATGGA
64 TCG-TTTCTTTGCCT-TATTTTTGTAAATTCA-AAGTTTG-TGCCTCAAATGAGACAAACATGGA
* * * *
128672 TTCTAGTAAGGATCTTCATTCATTTCGTGATTA
125 TTCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * ** * *
128705 GGCACTATAAACAGATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* * * * * * * ** *
128770 CTTTTCTTTGCCTTATTTTACT-TAAAATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* ** *
128834 TC-GTAA-AAGTCTCCACTC-TTTCCAAGATTT
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * *
128864 GG-ATCCA-AAACCACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTT-GCAAGAA
1 GGCA-CCATAAA-CACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGT-TTCGC-AGGA
* * * * *** ** * *
128926 AAGCTTTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAAT-ATGACAAACAT
62 AATC-GTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGA-GACAAACAT
* * ** *
128989 GAATACTCA-TACTAAT-TCCCATTC-TTT-TTAGGATTA
122 GGATTC-CAGTAAGAATCT-CCATTCATTTCGTA--ATTA
* * * * * * ** *
129025 GGCTCCATAAACATAGTCT-TCTCATAAGGATAAAGGATATTGATGATTTCATTTCGCAAGAAAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * * *
129089 -GCTTT-TTTCCCACTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACAAACATGGATT
65 CG-TTTCTTT-GC-CTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * * **
129152 CTAGTAAGGATCTTCTTTCATTTCGGGATTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
** * * * * ** * *
129183 GGCATTATAAACACTTTCTCCTCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCG-CAGGAAAT
* * ** * * * * ** *
129248 CTTTTCTTTGCCTCATTTTCCCTAAAATCAAAG--TGTGCATTTTAATTGAGACATGCATTGATT
65 CGTTTCTTTGCCTTATTTT-TGTAAATTCAAAGTTTGTGC--CTCAAATGAGACAAACATGGATT
* * *
129311 CTC-GTAA-AGGTCTCCATTCTTTTC-AAGATTA
127 C-CAGTAAGA-ATCTCCATTCATTTCGTA-ATTA
* * * * * *
129342 GG-ATCCAAAAACACTTTC-CATTCAGTAGGATAAATGACATTGATGCTTTGGTGTT-GTAAGAG
1 GGCA-CCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGT-TTCG-CAG-G
* ** * * *** ** * ** * **
129404 AAGCTTTTTTTTTTTCCACCGTTAATGATAAAATCAAAGTTTGTTTCTTAAAAAAGACAAACATG
61 AA-ATCGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATG
* * ** * ** *
129469 AATACTCA-TACTAATCCCCATTTTTTTCAG-GATTA
123 GATTC-CAGTAAGAATCTCCATTCATTTC-GTAATTA
** * * * * ** * * *
129504 GGCTTCGTAAACATAGTCT-TCTCATAAGGATGCAGGATATTGATGATTTGGTTAT-GCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTT-TCGCAGGAAA
* * * * * *
129567 -CGCTTT-TTTCCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATGGA-
64 TCG-TTTCTTTGCC-T-TATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGAT
* * * *
129629 TCCTAGTAAGGATCTTCATTCATTTCATGATTA
126 TCC-AGTAAGAATCTCCATTCATTTCGTAATTA
* * * * * * * ** *
129662 AGCACTATAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAA
1 GGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAA
* * * * * * * *
129726 TCTTTTCTTTGCATTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATT
64 TCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
** * * *
129790 CTTGCAA-AAGTCTCCATTCGTTT--TAAGATTG
127 CCAGTAAGAA-TCTCCATTCATTTCGT-A-ATTA
* * * * ** * *
129821 GGAACCAAAAACATATTGC-CTTCATTAGGATACATGACGTTGATGCG-TTGGTGTCGCAAGAAA
1 GGCACCATAAACACATT-CTCTTCATTAGGATAAATGATATTGATG-GTTTGGTTTCGCAGGAAA
* *** * * * * * * *
129884 -AGCTTGTCTTT-CCACCGTTATTGATAGATTCAAAGTTTG-ACTCTTAAATAAGACAAAGATGA
64 TCG-TT-TCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGG
* * * *
129946 ATACTCATGCTAATGCA--T--ATTCTTTTC-TGGATTA
124 ATTC-CA-G-TAA-GAATCTCCATTCATTTCGT-AATTA
* * * * *
129980 GGCACCATAAACATAGTCT-TCTCA-TAGGGATAAATGATATTGATGCTTTGGTTTTGCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTA-GGATAAATGATATTGATGGTTTGGTTTCGCAGGAAA
* * * * * * *
130043 -CGCTTTCTTTCCCTCAATTTTTGTAAAGT-ATAAG-TTGATTCCTAAAATTAGACAGACATGGA
64 TCG-TTTCTTTGCCT-TATTTTTGTAAATTCA-AAGTTTG-TGCCTCAAATGAGACAAACATGGA
* * * *
130105 TTCTAGTAAGGATCTTCATTCATTTCGTGATTA
125 TTCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * ** * *
130138 GGCACTATAAACAGATTCTCCTCATTAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* * * * * * * * ** *
130203 CTTTTCTTTGCCTTAGTTTACT-TAAAATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTC
65 CGTTTCTTTGCCTTA-TTT-TTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* ** *
130267 TC-GTAA-AAGTCTCCACTC-TTTCCAAGATTT
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * *
130297 GG-ATCCA-AAACCACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTT-GCAAGAA
1 GGCA-CCATAAA-CACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGT-TTCGC-AGGA
* * * * *** ** * * * * * *
130359 AAGCTTTTTTTTTCCACCGTTAATGATAAAATAAAAGTTTGT-CTCTTATATAAGACAAACATGA
62 AATCGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGG
* ** * *
130423 ATACTCA-TACTAAT-TCCCATTCTTTTCAG-GATTA
124 ATTC-CAGTAAGAATCT-CCATTCATTTC-GTAATTA
* * * * * * ** *
130457 GGCTCCATAAACATAGTCT-TCTCATAAGGATAAAGGATATTGATGATTTCATTTCGCAAGAAAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * * * * *
130521 -GCTTT-TTTCCAACTAATTTTTGTAAATTCTATGTTCGAGCCTCAAATAAGGCAAACATGGATT
65 CG-TTTCTTTGC--CTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * * **
130584 CTAGTAAGGATCTTCTTTCATTTCGGGATTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
** * * * * * * **
130615 GGCATTATAAACACTTTTTCCTCTTTAGGATAAATAATATTAATGGTTTTCTTTTTC-CTA-GAA
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGG-TTT-GGTTTCGC-AGGAA
* * ** * **** * * ** *
130678 ATCTTTTCTTTGCCTCATTTTCCCTAAAATCAAAGTTTGCATTTTAATTGAGACATGCATTGATT
63 ATCGTTTCTTTGCCTTATTTT-TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * **
130743 CCCA-TAA-AGGTCTCCACTC-TTTCCAAGATTA
127 -CCAGTAAGA-ATCTCCATTCATTTCGTA-ATTA
* * * * *
130774 GG-ATCCAAAAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTT-GCAAGAGA
1 GGCA-CCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGT-TTCGC-AG-GA
* * *** ** * * * * *
130837 AGCTC-TTT-TTTTCCACCGTTAATGATAAAATCAAAGTTT-TTCTCTTAAATAAGACAAACATT
62 A-ATCGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATG
* * ** * * *
130899 AATACCCA-TACTAATCCCCATT-GTTT-TTAGGATTA
123 GAT-TCCAGTAAGAATCTCCATTCATTTCGTA--ATTA
* * * ** * * * * *
130934 GTCTCCAT-AA-ACATGTCT-TCTCATAAGGATGCAGGATATTCATGATTAGGTTAT-GCAAGAA
1 GGCACCATAAACACAT-TCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTT-TCGCAGGAA
* * * * * * *
130995 A-CGCTTT-TTTCCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATAGA
63 ATCG-TTTCTTTGCC-T-TATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGA
* * * **
131058 TTCTAGTAAGGATCTTCATTCATTTCGGGATTA
125 TTCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * * * ** *
131091 GGCACAATAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAA
1 GGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAA
* * * * * * ** *
131155 TCTTTTCTTTGCCATATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACAGGCATTGATT
64 TCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
** * *
131219 CTTGCAA-AAGTCTCCATTCATTT--TAAGATTG
127 CCAGTAAGAA-TCTCCATTCATTTCGT-A-ATTA
* * * * * * * *
131250 GGAACAAAAAACACATTGC-CTTCATTAGGATACATGATGTTGATGCTTTGGTGTCGCAAGAAA-
1 GGCACCATAAACACATT-CTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* *** * * * ** * *
131313 AGCTTGTCTTT-CCACCGTTATTGATAGAA-TCAAAGTTTG-ACTCTTACGTAAGACAAACATGA
65 CG-TT-TCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGG
* * * *
131375 ATACTCATGCTAATGCA--T--ATTCTTTTC-TGGATTA
124 ATTC-CA-G-TAA-GAATCTCCATTCATTTCGT-AATTA
* * * * *
131409 GGCACCGTAAACATAGTCT-TCTCA-TAGGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTA-GGATAAATGATATTGATGGTTTGGTTTCGCAGGAAA
* * * * * * *
131472 -CGCTTTCTTTCCCTCAATTTTTGTAAAGT-ATAAG-TTGATTCCTAAAATTAGACAGACATGGA
64 TCG-TTTCTTTGCCT-TATTTTTGTAAATTCA-AAGTTTG-TGCCTCAAATGAGACAAACATGGA
* * * ** *
131534 TACTAGTAAGGATCTTTATTCATTTCGTGATTA
125 TTCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * * ** * * *
131567 GGCACTATAAACAGATTCTCCTCATTAAGATAAAGGATATTGATGGTTTTCTTTTGCTTGAAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGC-AGGAAAT
* * * * * * ** *
131632 CTTTTCTTTGCCTTATTTTACT-TAAAATCAAAGTTTGTACTTTAAATGGGACAGGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* **
131696 TC-GTAA-AAGTCTCCACTC-TTTCCAAGATTCA
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATT-A
* * * * * * * *
131727 -G-ATCCAAAAACACTTTCCCTTGATTAGGATAAATGACATTGATGCTTTGG-TGCTGCAAGAGA
1 GGCA-CCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTC-GCAGGA-A
* * * * ** ** * * * * *
131789 AGCTTTTTTTTTCAC-CGTTAATGATAAAATAAAAGTTTGT-CTCTTAAATAAGACAAACATGAA
63 ATCGTTTCTTTGC-CTTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGA
* * *
131852 TACTCACACT-A-ATTC-CCATTC-TTT-TTAGGATTA
125 T--TC-CAGTAAGAATCTCCATTCATTTCGTA--ATTA
* * * * * * *
131885 GGCACCATAAACATAGTCT-TCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGTAAGAAAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
** * * * * *
131949 -GCTTT-TTCCCCCTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACAAACATGGATTC
65 CG-TTTCTT-TGCCTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* * * * *
132012 TAGTAAGGATCTGCTTTCATTTCGTGATTA
128 CAGTAAGAATCTCCATTCATTTCGTAATTA
* * * ** *
132042 GACACTATAAACACATTCTCCTT-AATAGGATAAATGATATTGATGGTTTTCTTTGGCAAGGAAA
1 GGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGC-AGGAAA
* * * *** * ** *
132106 TCTTTTCTTTGCCTTATTTTCTTTAAAATCAAAGTTTGTATTTTAAATGAGACATGCATCGATTC
64 TCGTTTCTTTGCCTTATTTT-TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* *
132171 TC-GTAA-AAGTCTCCATTCTTTTC-AAGATT-
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * * *
132200 GAGAACCAAAAACACATTC-CTTTCATTAGGATAAATGACATTGATGCTTTGGTGTCGCAAGAGA
1 G-GCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-A
* * * * * **
132264 AGC-TTGTCTTT-CCACTGTTATTGATAGAA-TCAAA----GT---T---ATAAGACAAACATTA
63 ATCGTT-TCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGCCTCAAATGAGACAAACATGG
* ** * * *
132316 ATATTCA-TACTAGTC-CACATTCTTTTC-TGGATTA
124 AT-TCCAGTAAGAATCTC-CATTCATTTCGT-AATTA
** * * * * * ** * * * *
132350 GGCACTGTAAAAATAGTCT-TCTCATAAAGATTCAGGATATTGATGATTTGGCTTCGCAAGAAAC
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAA-
* ** ** * * *
132414 TC-TTT-TTTCCCACCAATTTTTGTAAATTTTAAGTTCGTGCCTCAAATGAGATAGACATGGATT
64 TCGTTTCTTT-GC-CTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * * *
132477 CTAGTAAGGATCTTCATTCATTTCATGATTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * ** * * *
132508 TGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGTTTTCTTTTGCGTGGAAAA
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGC-AGGAAAT
* ** * * * * ** *
132573 CTTTTCTTTGCCTTATTTTCCT-TAAA-AAAAAGTTTGTACTTTAAATGAGGCATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* ** *
132636 TC-GTAA-AAGTCTACATTC-TTTCCAAGATTG
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * ** * ** * * *
132666 GGAACAAAAAACACATTAACTTCATTAGGATACATGGCATTGATGCTTTGGTGTT-GTAAGAGAA
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGT-TTCGCAGGA-AA
* * * *** ** * * * * * *
132730 GCTTTTCTGT-CCACCGTTAATGATAAAATCAAAGTTTAT-CTCTTAAATAAGGCAAACATGAAT
64 TCGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGAT
* ** * *
132793 ACTCA-TACTAATCCCCATTCTTTTCAG-AATTA
126 TC-CAGTAAGAATCTCCATTCATTTC-GTAATTA
* * * * * *
132825 GGCACCATAAACATAGTCT-TCTCATAAGGATACA-GAATATTGATGTTTTGGTTTCGCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATG-ATATTGATGGTTTGGTTTCGCAGGAAA
* * * * * * * *
132888 TAC-TTT-TTTCCCATCAATTTCTGTAAATTCTATGTTCGTGGCTCAAATGAGACAAACAGGGAT
64 T-CGTTTCTTTGCC-T-TATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGAT
* * * * *
132951 TCTACTAAGGATCTTCATTCATTTCGTGATTA
126 TCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * * ** *
132983 GGCACTATAAACATATTCT-TCTCATTAGGACAAATGATATTTAAGGTTTTCTTT-GCATGAAAA
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAA
* * * * * ** *
133046 TCTTTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
64 TCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * *
133110 CTC-GTAA-AAGTCTCCAATCTTTTC-AAGATTG
127 C-CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * * * *
133141 GGAACCAAAAACACATT-TCTTTCATTAGGATACATGACATTGATGCTTTGGTATCGCAAGAGAA
1 GGCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-AA
* * * * * *
133205 --G---C---ACCGTTA---TTGATAGAA-TCAAGGTTTGT-CTCTTAAATAAGACAAACACGAA
64 TCGTTTCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGA
* ** * *
133257 TATTCA-TACTAATCTACATTCTTTTC-TAGATTA
125 T-TCCAGTAAGAATCTCCATTCATTTCGTA-ATTA
* * * ** * * * * * *
133290 GGCACCGTAAAAATAACCT-TCTCATAAGGATACAGGATATTGATGATTTGGTTTTGCAAGAAAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* ** * *
133354 -GCTTT-TTTCCCACCAATTTTTGTAAATTCTAAGTTTGTG-C-C-AATGAGACAAACATGAATT
65 CG-TTTCTTT-GC-CTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * * * **
133414 CTAGTAAGGATCTTCTTTCATTCCGGGATTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * * * * * ** * **
133445 AGCACTATAAATACAATCT-TCTCATCAGGATATACGATATTGATAGTTTTCTTTTGCATTAAAA
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAA
* * * * * ** *
133509 TCTTTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATCGATT
64 TCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
** * *
133573 CTTGTAA-AAGTCTCCATTC-TTT-TTAAGATTG
127 CCAGTAAGAA-TCTCCATTCATTTCGT-A-ATTA
* * * * ** * *
133604 GGAACCAAAAACACATTC-CTTTCATTAGGATACATGATATT-AGTGCTTTGGCGTCACAAGAGA
1 GGCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGA-TGGTTTGGTTTCGCAGGA-A
* * ** * * * *
133667 AGC-TTGTCTTTCCACCGTTA--TTCATAGAA-TCAAGGTTTGT-CTCTTAAATAAGACAAACAC
63 ATCGTT-TCTTT--GCC-TTATTTTTGTA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACAT
* * ** * *
133727 GAATATTCA-TACTAATCTACATTCTTTTC-TAGATTA
122 GGAT-TCCAGTAAGAATCTCCATTCATTTCGTA-ATTA
* * * * * * * * * * * *
133763 GGCACCGTAAAAATAGTCT-TCTCATAAAGATACAGGATATTGATGATTTGGCTTCGGAAGAAA-
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * ** * * * * * * * **
133826 C-TATTTTTTCCCACCAATTTGGTAAATTCTAAGTTCGTGCCTCAAATCAAACAGACATAAATTC
65 CGT-TTCTTTGCC-TTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* * * *
133890 TAGTAAGGATCTTCATTCATTTCGTGATTA
128 CAGTAAGAATCTCCATTCATTTCGTAATTA
* * * ** ** *
133920 GGCACTATAAACACATTTTCCTCATTAGGATACTTGATATTGATGGTTTTCTTTTGCATGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* * * *** * ** *
133985 CTTTTCTTTGCCTTATTTTCCT-TAAAATCAAATTTTGTATTTTAAATGAGACATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
** * * *
134049 TTGCAA-AAGTCTCCATTCTTTTC-AAGATT-
128 CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * * * * *
134078 GAGAACCAAAAACAAATT-TCTTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAGAAA
1 G-GCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGTTTCGC-AGGAA
* * ** ** * * **
134142 AGCCTTTCTTT-CCATCGTTATTAATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAACATAA
63 ATCGTTTCTTTGCC-TTATT-TTTGTA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGG
* ** ** *
134204 ATACTCA-TACTAATC-CACATTC-TTTTTTGGATTA
124 ATTC-CAGTAAGAATCTC-CATTCATTTCGT-AATTA
** * * * * * * *
134238 GGCACCATAAACGTAGTCT-TCTCA-CAGGGATACATGATAATGATGCTTTGGATTCGCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTA-GGATAAATGATATTGATGGTTTGGTTTCGCAGGAAA
* **** ** ** ** *
134301 -CGCTTCCCCCCCCCCCCCACCCCCAATTTTTGT-AATGT-ATAAGTTCATTTCTCAAATTAGAC
64 TCG-TT----------TCTTTGCCTTATTTTTGTAAAT-TCA-AAGTTTGTGCCTCAAATGAGAC
* * * * **
134363 AAACATAGATTCTAGTAAGGATCTTCATTCATTTCGGGATTA
116 AAACATGGATTCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * * * *
134405 GGCACAATAAACACAATCTC--C-TT--G-T-CACG--A-T-A---CTT--TTACAC-GGAAATC
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAATC
* * * * * * * ** * *
134453 TTTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTATACTTTAAATGATA-ATGCATTGATGCT
66 GTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC-
* *
134516 CA-TAA-AAGTCTCCATTCTTTTC-AAGATTGA
128 CAGTAAGAA-TCTCCATTCATTTCGTA-ATT-A
* * * * * ** * *
134546 GAC-CCAAAAACACATTC-CTTTCATTAGAATACATGACATTGATACTTTGGTCTCGCAAGAAAA
1 GGCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGTTTCGC-AGGAAA
* * ** ** *
134609 GCTTTTCTTT-CCATCGTTAATGATAGAA-TCAAAG-TTGT-CTCTTAAAT-ACGACAAACA-GG
64 TCGTTTCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGA-GACAAACATGG
* ** * *
134668 AATACCCA-TACTAATCCCCATTC-TTT-TTAGGATTA
124 -AT-TCCAGTAAGAATCTCCATTCATTTCGTA--ATTA
* ** * * * * *
134703 GGCACCATAAGCGTAGTCT-TCTCATAAGGATACATGATATTGATGCTTTGGTTTCG-AGAGATA
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAG-GAAA
* ** * * *
134766 T-GCTTTCTTCGCACCAATTTGTGTAAAGT-ATGAGTTCAT-TG-CTCAAATGAGACAAACATGG
64 TCG-TTTCTTTGC-CTTATTTTTGTAAATTCA-AAGTT--TGTGCCTCAAATGAGACAAACATGG
** * * * *
134827 ATTCTTGTAGGGATCTTCATTCATTTCAG-GATTA
124 ATTCCAGTAAGAATCTCCATTCATTTC-GTAATTA
* * * ** *
134861 GGCACTATAAACACGTTCTCCTT-TTTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAA
1 GGCACCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAA
* * * * * * ** *
134925 TCTTTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTATACTTTAAATGAGACATGCATTGATT
64 TCGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
** * *
134989 CTTGCAA-AAGTCTCCATTCGTTT--TAAGATTA
127 CCAGTAAGAA-TCTCCATTCATTTCGT-A-ATTA
* * * * ** * * * * *
135020 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGTAAGAGAAG
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-AAT
* ** ** * * * * **
135085 CTTTTCTTT-CCACCATTAATGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGAACA
65 CGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGATT
** * *
135148 CTCA-TACTAAT-TCCCATTCTTTTCAG-GATTA
127 C-CAGTAAGAATCT-CCATTCATTTC-GTAATTA
* * * * * * * *
135179 GGCACTATAAACATAGTCT-TCTCATAAGGATAAAGGATATTGATGATTTGGTTTCACAAGAAAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * *
135243 -GCTTT-TTTCCCACTAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATTGATT
65 CG-TTTCTTT-GC-CTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * * *
135306 CTAGTAAGGATCTGCATTCATTTCGTGATTG
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * ** *
135337 GGCACTATAAACACATTCTCTTAAATAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* * * *** * ** *
135402 CATTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTATATTTTAAATGAGACATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
* *
135466 GC-GTAA-AAGTCTCCATTCTTTTC-AAGATTGA
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATT-A
* * * * * * **** *
135497 GAC-CCAAAAACAAATTC-CTTTCATTAGAATACATGACATTGGCACTTTGGTCTT-GCAAGAGA
1 GGCACCATAAACACATTCTC-TTCATTAGGATAAATGATATTGATGGTTTGGT-TTCGCAGGA-A
* * * * ** * * *
135559 AGCTTTTCTTTCCACCGTTA--CTAATAGAA-TAAAAGTTTGT-CTCTTAAATAAGACAAACATG
63 ATCGTTTCTTT--GCC-TTATTTTTGTA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATG
* * ** ** *
135620 AATACTCA-TACTAATC-CACATTC-TTTTTTGGATTA
123 GATTC-CAGTAAGAATCTC-CATTCATTTCGT-AATTA
* * * * *
135655 GGCACCATAAACATAATCT-TCTCATAAGG----AT-ACA-TGA---TTTGGTTTCGCAAGAAA-
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * * * **
135709 CGATTT-TTTCCCTCCAATTTTTGTAAATTCTAAGTTTGTGCTTCAAATGAGACAAATGTGGATT
65 CG-TTTCTTTGCCT--TATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATT
* * * *
135773 CTAGTAAGGATCTTCATTCATTTCGTGATTA
127 CCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * ** * *
135804 GGCACTATAAACACATTCTCTTCATCAGGATACATGATATTGATGGTTTTTTTTTGCATGAAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* * * * * * ** *
135869 CTTTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
** ** *
135933 TTGTAA-AAGTCTCCATTTGTTT--TAAGGTTG
128 CAGTAAGAA-TCTCCATTCATTTCGTAA--TTA
* * * * * * * * *
135963 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-AAT
*** * * * *
136028 C-TTGTCTTT-CCACCGTTATTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAACATGAA
65 CGTT-TCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGA
* ** * * * *
136089 TACCCA-TACTAATCCCCTTTCCTTTCAG-GATTA
125 T-TCCAGTAAGAATCTCCATTCATTTC-GTAATTA
* * * * * * * * *
136122 GGCACCATAAACATAGTCT-TCTCATAAGCATACATGATGTTGATGCTGTGGTTTCGCA--ACAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
** * * ** * * *
136184 ACGCTTTCTTCCCACCTATTTTTGTAAAGT-ATAAGTTCATTCCTCAAATTAGGCAAACATGGAT
65 -CG-TTTCTTTGC-CTTATTTTTGTAAATTCA-AAGTTTGTGCCTCAAATGAGACAAACATGGAT
* * * * * ** *
136248 TCTTA-TAAGGATCTTCATCCATTTTGGGATTC
126 TC-CAGTAAGAATCTCCATTCATTTCGTAATTA
* * * ** *
136280 GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATAGTTTTCTTTTGCATGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* * * * * * * * * ** *
136345 CTTTTCTTTGCCTCGATTTCCT-TAAAATCAAATTTTGTACTTTAAATGGGACATGCATTGATTC
65 CGTTTCTTTGCCT-TATTT-TTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
** *
136409 TC-GTAA-AAGTCTCCATTC-TTTCCAAGATTG
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * * * * * * * *
136439 GGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTAATGCTTTGGTGTCGCAAGAGAAG
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-AAT
* ** * * * *
136504 CTTTTCTTT-CCAACATTTTTGATAAAATCAAAG--TCTACCTCTTAAATAAGAC-AA-AT--A-
65 CGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGCCTC--AAATGAGACAAACATGGAT
* *
136561 T--A--AA-TA-CT-CATACTC-TTT--AAGATTA
126 TCCAGTAAGAATCTCCAT--TCATTTCGTA-ATTA
* * * * * *
136586 GGCACCAT-AA-ACATTGTCTTC-TCATACGGATACAGGATATTGATGATTTGGTTTTGCAAGAA
1 GGCACCATAAACACATTCTCTTCAT--TA-GGATAAATGATATTGATGGTTTGGTTTCGCAGGAA
** ** ** * *
136648 A-CGCTTT-TCTCCCACCAATTTTTGTAAATTTTAAGTTCT-TGCCTTAAATGAGACAGACATGG
63 ATCG-TTTCT-TTGC-CTTATTTTTGTAAATTCAAAGTT-TGTGCCTCAAATGAGACAAACATGG
* * * * *
136710 ATTCTAGTAAGGATCTTCATTTATTTCGTGATTA
124 ATTCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * * ** * *
136744 GGCACTATACACACATTCTCCTCCTTAGGATACAA-GGTATTGATGGTTTTCTTATACG-TGAAA
1 GGCACCATAAACACATTCTCTTCATTAGGATA-AATGATATTGATGGTTTGGTT-T-CGCAGGAA
* * * * ** *
136807 ATCTTTTCTTTGCCTTATTTTCCT-TGAAA-TCAAAGTTTGTACTTTAAATGAGACATGCATTGA
63 ATCGTTTCTTTGCCTTATTTT--TGT-AAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGA
* * *
136870 TTCTC-GTAA-AAGTCCCCATTCTTTTC-AAGATTA
125 TTC-CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * ** * * * * *
136903 GG-ATCCAAAAACTCATT-TCCTTCATTAAGATACGTGACATTGATGCTTTGGTGTCACAAGAGA
1 GGCA-CCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-A
* * * * ** * * * ***
136966 AGC-TTTTTTTTCAC-CATTAATGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACACAAA
63 ATCGTTTCTTTGC-CTTATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGA
* ** * * *
137028 TACTCA-TACTAATCCCCATTCTTTTCAG-GATTA
125 TTC-CAGTAAGAATCTCCATTCATTTC-GTAATTA
** * * * * * *
137061 GGCACCATAAACGTAGTCT-TCTCATAAAGAT-ACTGGATATTGATGATTTGGTTT-GACAAGAA
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAAT-GATATTGATGGTTTGGTTTCG-CAGGAA
* * * * * **
137123 A-CGATTT-TTTCCCTCCAATTTTTGTAAATTCTAAGGTT-TGCTTCAAATGAGACAAATGTGGA
63 ATCG-TTTCTTTGCCT--TATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGA
* * * *
137185 TTCTAGTAAGGATCTTCATTCATTTCGTGATTA
125 TTCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * ** *
137218 GGCACTATAAACACATTCTCTTCATCAGGATACATGATATTGATGGTTTTTTTTTGCATGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* ** * * * * * ** * *
137283 CTTTTCTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCT
65 CGTTTCTTTGCCTTATTTT-TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTCC
* ** *
137348 TGTAA-AAGTCTCCATTTGTTT--TAAGATTG
129 AGTAAGAA-TCTCCATTCATTTCGT-A-ATTA
* * * * * * * * * * * *
137377 GGAACGAAAAACACATTCCCTTCTTTAGGATACATGACATTGTTGCTTTGGTGTCGCAAGAGAAG
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-AAT
*** * * * * *
137442 C-TTGTCTTT-CCACCGTTATTGATAGAA-TCAAAGTTTGT-CTTTTAAATAAGACAAACATGAA
65 CGTT-TCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGGA
* ** * *
137503 TACCCA-TACTAATGC-CCTTTC-TTT-TTAGGATTA
125 T-TCCAGTAAGAAT-CTCCATTCATTTCGTA--ATTA
* * * * * * * * **
137536 GGCACAATAAACATAGTCT-TCTCGTAAGGATACATGATATTGATGCTTTGGTTTCACAACAAA-
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
* * ** * * *
137599 CGCTTTC-TTCCCTCCTATTTTTGTAAAGT-ATAAGTTCATTCCTCAAATTAGAAAAACATGGAT
65 CG-TTTCTTTGCCT--TATTTTTGTAAATTCA-AAGTTTGTGCCTCAAATGAGACAAACATGGAT
** * * * *
137662 TCTTGTAAGGATCTTCATTCATTTCGTGATTC
126 TCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * ** * *
137694 GGCACTATAAAGACATTCTCCTCATTAGGAT--A-GATATTGATAGTTTTCTTTTGCCTGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCG-CAGGAAAT
* ** ** * * * * *
137756 CTTTTCTTTGCCTTATTTTCCTCAAAACCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCT
65 CGTTTCTTTGCCTTATTTTTGT-AAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC-
* * * *
137821 C-GTAA-AAGTCCCCATTCTTTTC-AAGATTT
128 CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * ** * * *
137850 GG-ATCCAAAAACTCATT-TCCTTCATTAGGATACATGGCATTGATGCTTTGGTATCGCAAGAGA
1 GGCA-CCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-A
* ** * ** * * * * *
137913 AGC-TTT-TTTTTCTACCATTAATGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACACGA
63 ATCGTTTCTTTGCCT--TATTTTTG-TAAATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGG
* ** * * *
137975 ATACTCA-TACTAATCCCCATTCTTTTCAG-GATTA
124 ATTC-CAGTAAGAATCTCCATTCATTTC-GTAATTA
* * * * * * * * * *
138009 GGCACCATAAACATAGTCT-TCTCATAAAGAT-ACTGGATAATGCTGATTTGGTTACGCAAGAAA
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAAT-GATATTGATGGTTTGGTTTCGCAGGAAA
* * ** * * *
138072 -CGATTT-TTTCCCTCCAATTTTTGTAAATTTTAAGTTTATGCTTCAAATGAGACAAACGTGGAT
64 TCG-TTTCTTTGCCT--TATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGAT
* * * * *
138135 TCTAGTAAGGATCTTCATTCATTTCATGATTA
126 TCCAGTAAGAATCTCCATTCATTTCGTAATTA
* * * * ** *
138167 GGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTTTTTTTGCATGGAAA
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGG-TTTGGTTTCGCA-GGAAA
** * ** * * * * * ** *
138232 TATTTTTTTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTC
64 TCGTTTCTTTGCCTTATTTT-TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
** * ** * *
138297 TTGTAA-AAGTCTCAATTTGTTT-GAAGATTG
128 CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * * * * * * * *
138327 GGAACCAAAAACTCATGCCCTTCATTAGGATACATGACATCGATGCTTTGGTGTT-GCAAGAGAA
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGT-TTCGCAGGA-AA
* *** * * * * *
138391 GC-TTGTCTTT-CCACCGTTATTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAGACATGA
64 TCGTT-TCTTTGCC-TTATTTTTG-TA-AATTCAAAGTTTGTGC-CTCAAATGAGACAAACATGG
* ** * * *
138452 ATACCCA-TACTAATC-CCTTTCCTTTCCG-GATTA
124 AT-TCCAGTAAGAATCTCCATTCATTT-CGTAATTA
* * * * * * * * *
138485 GGCACCATAAACATAGTCT-TCTCATAAGCATACATGATATTGATGCTGTGCTTTCGCA--ACAT
1 GGCACCATAAACACATTCTCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAAT
** * * ** * * * *
138547 ACGCTTTCTTCCCACCTATTTTTGTAAAGT-ATAAGTTCATTCCTAAAATTAGACAAACAAGGAT
65 -CG-TTTCTTTGC-CTTATTTTTGTAAATTCA-AAGTTTGTGCCTCAAATGAGACAAACATGGAT
* * * * * *
138611 TCTTA-TAAGGATCTTCATTCATTTTGTGATTC
126 TC-CAGTAAGAATCTCCATTCATTTCGTAATTA
** * * * ** *
138643 GATACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATAGTTTTCTTTTGCATGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* ** * * * * * ** **
138708 CTTTTCTTTGCCTCGTTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTAATTC
65 CGTTTCTTTGCCTTATTTT--TGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC
** *
138772 TC-GTAA-AAGTCTCCATTC-TTTCCAAGATTG
128 -CAGTAAGAA-TCTCCATTCATTTCGTA-ATTA
* * * ** * * ** * ** *
138802 GGAACCAAAAACACATTCCCTTCATTAGGATACGTGACATTAATACTTTGGTGTCGCAAAAGAAG
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGA-AAT
* ** * * * * * * *
138867 CTTTTCTTT-CCAACATTATTGATAAAATCAAAG--TCTACCTCTTAAATAAGACAAATATGAAT
65 CGTTTCTTTGCC-TTATTTTTG-TAAATTCAAAGTTTGTGCCTC--AAATGAGACAAACATGGAT
* ** * *
138929 ACTCA-TACTAATC-CACATTCTTTTC-AAGATTA
126 TC-CAGTAAGAATCTC-CATTCATTTCGTA-ATTA
* * * * *
138961 GGCACCATAAACATAGTTTTC-TCA-TACGGATACATGATATTGATGATTTGGTTTCGCAAGAAA
1 GGCACCATAAACACA-TTCTCTTCATTA-GGATAAATGATATTGATGGTTTGGTTTCGCAGGAAA
* * ** * * **
139024 -CGCTTTTTTCTGACC-AATTTTTGTAAATTTTAAGTTCT-TGCCTTAAATGAGACAGACATTAA
64 TCG-TTTCTT-TG-CCTTATTTTTGTAAATTCAAAGTT-TGTGCCTCAAATGAGACAAACATGGA
* * * * *
139086 TTCTAGCAA-AGATTTTCATTCATTTCGTGATTA
125 TTCCAGTAAGA-ATCTCCATTCATTTCGTAATTA
* * * ** *
139119 GGCACTATATACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAAT
1 GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-GGAAAT
* ** ** * * * * * *
139184 CTTTTCTTTGCCTTATTTTCCTCAAAACCAAAGTTTGTACTTTAAATGAGACAAGCTTTGATTCT
65 CGTTTCTTTGCCTTATTTTTGT-AAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTC-
* * * *
139249 C-GTAAAAATCCCCATTCTTTTC-AAGATTA
128 CAGTAAGAATCTCCATTCATTTCGTA-ATTA
* * * * * *
139278 GG-ATCCAAAAACTCATT-TCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
1 GGCA-CCATAAACACATTCT-CTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA
139336 AGAGAAGCTT
Statistics
Matches: 13631, Mismatches: 4426, Indels: 3155
0.64 0.21 0.15
Matches are distributed among these distances:
137 1 0.00
138 14 0.00
139 121 0.01
140 60 0.00
141 37 0.00
142 5 0.00
143 3 0.00
144 1 0.00
145 12 0.00
146 36 0.00
147 64 0.00
148 33 0.00
149 263 0.02
150 40 0.00
151 8 0.00
152 11 0.00
153 13 0.00
154 27 0.00
155 258 0.02
156 191 0.01
157 995 0.07
158 3935 0.29
159 5869 0.43
160 978 0.07
161 357 0.03
162 213 0.02
163 2 0.00
164 11 0.00
165 3 0.00
166 2 0.00
167 60 0.00
168 6 0.00
169 2 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (157 bp):
GGCACCATAAACACATTCTCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAGGAAATC
GTTTCTTTGCCTTATTTTTGTAAATTCAAAGTTTGTGCCTCAAATGAGACAAACATGGATTCCAG
TAAGAATCTCCATTCATTTCGTAATTA
Found at i:132237 original size:159 final size:154
Alignment explanation
Indices: 124421--139327 Score: 1199
Period size: 159 Copynumber: 94.3 Consensus size: 154
124411 TAGGCATTTT
* * * * * **
124421 AAACACCTTCTCC-TCATTAGGGTAAATGATATTAATGATTTTCTTTTGCTTGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGC-AAGAAATCTTTTCT
* * * ** * * **
124485 TTGCCTCATTTTCCTTAAAATCAAAGATTGTATTTTAATTGAGACATGCATTGATTCTCGTAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* * *
124550 GTCTACATTC-ATTCTAACA-TAGGGAACCAA
126 GTCTCCATTCTTTTC-AAGATTA--GAACCAA
* * * * * *
124580 AAATACATTCCTTTCATTAGGATACAA-GATATTGATGCTTTGGTGTCGCAAGATAAGCTTTTCT
1 AAACACATTCCCTTCATTAGGATA-AATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCT
** * ** * * *
124644 TCCCACCGTTA--ATGATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATACTCATA
63 T--TGCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA
* * * * * *
124706 CTAATTC-CCATTCTTTTCAGGACTAGGCACCAT
123 -AAAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * *
124739 AAACATAGT-CTTCTCATAAGGATAAAGGATATTGATGATTT-CGTTTCGCAAGAAATGCTTTT-
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGC-TTT-GCAAGAAAT-CTTTTC
** * * * * * * ** * *
124801 TTCCCACTAATTTTTGTAAATTCTATGTTCGTGTCTCAAATAAGACAAACATGGATTCTAGT-AA
62 TTTGC-CTTATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAA
* * * * ** * * ** *
124865 GGATCTTCTTTCATTTCGGGATAAGGCATTAT
125 AG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * **
124897 AAACACTTTCTCC-TCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCTTGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGC-AAGAAATCTTTTCT
* ** * ** * * ** *
124961 TTGCCTCATTTTCCCTAAAATCAAAGTTTGCATTTTAATTGAGACATGCATTGATTCTCGTAAAG
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
*
125026 GTCTCCATTCTTTTCAAGATTAGGATCCAA
126 GTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * *
125056 AAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTTTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
* *** * ** * * * *
125121 TTCCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAAAAAGACAAACATGAATACTCATACT
64 TGCC-TTATT-TTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-A
* * ** *
125185 AA-TCCCCATTCTTTTCAGGATTAGGCTCCAT
124 AAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * ** * * * *
125216 AAACATAGT-CTTCTCATAAGGATGCAGGATATTGATGATTTGGTTATGCAAGAAA-CGTTT-TT
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTT-TGCAAGAAATCTTTTCTT
* * * * * * * * * * * * * *
125278 TCCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATAGTTTCTAGT-AAG
64 TGCC-T-TATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAAA
* * ** * *
125342 GATCTTCATTCATTTCGGGGTTAG-GCACAA
126 G-TCTCCATTCTTTTCAAGATTAGAAC-CAA
* * * * * * *
125372 TAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
1 -AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA-AGAAATCTTTTC
* * * * * *
125436 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATTCTTGCAAA
62 TTTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAA
*
125501 AGTCTCCATTCGTTTT-AAGATTGGGAACCAA
125 AGTCTCCATTC-TTTTCAAGATT-AGAACCAA
* * * ** * * * *
125532 AAACATATTGCCTTCATTAGGATACATGACGTTGATGCG-TTGGTGTCGCAAGAAAAGCTTGTCT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATG-GTTTGCT-TTGCAAG-AAATCTTTTCT
* ** * * *
125596 TTCCACCGTTA--TTGATAGAATCATAGTTTG-ACTCTTAAATAAGACAAACATGAATACTCATG
63 TT--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTC--G
* ** * **
125658 CT-AATG-CAT--ATTCTTTTCTGGATTAGGCACCGT
121 -TAAAAGTC-TCCATTCTTTTCAAGATTA-GAACCAA
* * * * * *
125691 AAACATAGT-CTTCTCA-TAGGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAA-CGCTTTC
1 AAACACATTCCCT-TCATTA-GGATAAATGATATTGATGGTTTGCTTT-GCAAGAAATC-TTTTC
* * * * * * * * *
125753 TTTCCCTCAATTTTTGTAAAGT-ATAAG-TTGATTCCTAAAATTAGACAGACATGGATTCTAGT-
62 TTTGCCT-TATTTTTTTAAAATCA-AAGTTTG-TACCTTAAATAAGACAAACAT-GATTCTCGTA
* * * ** * * *
125815 AAGGATCTTCATTCATTTCGTGATTAGGCACTAT
123 AAAG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * *
125849 AAACAGATTCTCC-TCATTAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCAAG-AAATCTTTTCT
* * * * ** **
125913 TTGACTTATTTTACTTAAAATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTCTCGTAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* * * *
125978 GTCTCCACTCTTTCCAAGATTTGGATCCAA
126 GTCTCCATTCTTTTCAAGA-TTAGAACCAA
* * * * * * *
126008 AACCACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTTTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAG-AAATC-TTTTCT
* *** * ** * * *
126073 TTTCCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAATATGACAAACATGAATACTCATAC
63 TTGCC-TTATT-TTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-
* * * * ** *
126137 TAATTC-CCATTCTTTTTAGGATTAGGCTCCAT
123 AAAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * *
126169 AAACATAGT-CTTCTCATAAGGATAAAGGATATTGATGATTT-CATTTCGCAAGAAATGCTTTT-
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGC-TTT-GCAAGAAAT-CTTTTC
** * * * * * * * * *
126231 TTCCCACTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGT-AA
62 TTTGC-CTTATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAA
* * * * ** * ** *
126295 GGATCTTCTTTCATTTCGGGATTAGGCATTAT
125 AG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * **
126327 AAACACTTTCTCC-TCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTG-CAAGAAATCTTTTCT
* ** * * ** * * ** *
126391 TTGCCTCATTTTCCCTAAAATCAAAGTGTGCATTTTAATTGAGACATGCATTGATTCTCGTAAAG
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
*
126456 GTCTCCATTCTTTTCAAGATTAGGATCCAA
126 GTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * * * * *
126486 AAACACTTTCCATTCAGTAGGATAAATGACATTGATGCTTTGGTGTTGTAAGAGAAGCATTTTTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATC-TTTTCT
* * ** * * * * *
126551 TTCCACCGTTA--ATGATAAAATTAATGTTTGT-CTCGTAAATAAGACAAACATGAATACTCATA
63 TT--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA
* * * * * *
126613 CTAA-TCCCCATTCTTTTCAGGATTGGGCACCAT
123 -AAAGTCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * * * * *
126646 AAACATAGT-CCTCACATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAA-CGCTTT-T
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTTT-GCAAGAAATC-TTTTCT
* * * * * * * ** * ** * * * *
126708 TTCCCATCAATTTCTATAAATTCTATGTTCATGCCACAAATGACACAAACATGGATCCTAGT-AA
63 TTGCC-T-TATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAA
* * * ** * * *
126772 GGATCTTCATTCATTTCGTGATTAAGCACTAT
125 AG-TCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * * *
126804 AAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA-AGAAATCTTTTCT
* * * * * * *
126868 TTGCATTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATTCTTGCAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
*
126933 GTCTCCATTCGTTTT-AAGATTGGGAACCAA
126 GTCTCCATTC-TTTTCAAGATT-AGAACCAA
* * * ** * * * *
126963 AAACATATTGCCTTCATTAGGATACATGACGTTGATGCG-TTGGTGTCGCAAGAAAAGCTTGTCT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATG-GTTTGCT-TTGCAAG-AAATCTTTTCT
* ** * * *
127027 TTCCACCGTTA--TTGATAGAATCATAGTTTG-ACTCTTAAATAAGACAAACATGAATACTCATG
63 TT--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTC--G
* ** * **
127089 CT-AATG-CAT--ATTCTTTTCTGGATTAGGCACCGT
121 -TAAAAGTC-TCCATTCTTTTCAAGATTA-GAACCAA
* * * * * *
127122 AAACATAGT-CTTCTCA-TAGGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAA-CGCTTTC
1 AAACACATTCCCT-TCATTA-GGATAAATGATATTGATGGTTTGCTTT-GCAAGAAATC-TTTTC
* * * * * * * * *
127184 TTTCCCTCAATTTTTGTAAAGT-ATAAG-TTGATTCCTAAAATTAGACAGACATGGATTCTAGT-
62 TTTGCCT-TATTTTTTTAAAATCA-AAGTTTG-TACCTTAAATAAGACAAACAT-GATTCTCGTA
* * * ** * * *
127246 AAGGATCTTCATTCATTTCGTGATTAGGCACTAT
123 AAAG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * *
127280 AAACAGATTCTCC-TCATTAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCAAG-AAATCTTTTCT
* * * ** **
127344 TTGCCTTATTTTACTTAAAATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTCTCGTAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* * * *
127409 GTCTCCACTCTTTCCAAGATTTGGATCCAA
126 GTCTCCATTCTTTTCAAGA-TTAGAACCAA
* * * * * * *
127439 AACCACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTTTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAG-AAATC-TTTTCT
* *** * ** * * *
127504 TTTCCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAATATGACAAACATGAATACTCATAC
63 TTGCC-TTATT-TTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-
* * * * ** *
127568 TAATTC-CCATTCTTTTTAGGATTAGGCTCCAT
123 AAAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * *
127600 AAACATAGT-CTTCTCATAAGGATAAAGGATATTGATGATTT-CATTTCGCAAGAAATGCTTTT-
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGC-TTT-GCAAGAAAT-CTTTTC
** * * * * * * * * *
127662 TTCCCACTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGT-AA
62 TTTGC-CTTATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAA
* * * * ** * ** *
127726 GGATCTTCTTTCATTTCGGGATTAGGCATTAT
125 AG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * **
127758 AAACACTTTCTCC-TCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTG-CAAGAAATCTTTTCT
* ** * * ** * * ** *
127822 TTGCCTCATTTTCCCTAAAATCAAAGTGTGCATTTTAATTGAGACATGCATTGATTCTCGTAAAG
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
*
127887 GTCTCCATTCTTTTCAAGATTAGGATCCAA
126 GTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * * * * *
127917 AAACACTTTCCATTCAGTAGGATAAATGACATTGATGCTTTGGTGTTGTAAGAGAAGCTTTTTTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AA--TCTTTTC
* *** * ** ** * * *
127982 TTTTCCACCGTTAATGATAAAATCAAAGTTTGTTTCTTAAAAAAGACAAACATGAATACTCATAC
62 TTTGCC-TTATT-TTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACATG-ATTCTCGTA-
* * * * * **
128047 TAA-TCCCCATTTTTTTCAGGATTAG-GCTTCGT
123 AAAGTCTCCATTCTTTTCAAGATTAGAAC--CAA
* * * * ** * * * *
128079 AAACATAGT-CTTCTCATAAGGATGCAGGATATTGATGATTTGGTTATGCAAGAAA-CGCTTT-T
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTT-TGCAAGAAATC-TTTTCT
* * * * * * * * * * * * *
128141 TTCCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATCCTAGT-AA
63 TTGCC-T-TATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAA
* * * * * * *
128205 GGATCTTCATTCATTTCATGATTAAGCACTAT
125 AG-TCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * * *
128237 AAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA-AGAAATCTTTTCT
* * * * * * *
128301 TTGCATTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATTCTTGCAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
*
128366 GTCTCCATTCGTTTT-AAGATTGGGAACCAA
126 GTCTCCATTC-TTTTCAAGATT-AGAACCAA
* * * ** * * * *
128396 AAACATATTGCCTTCATTAGGATACATGACGTTGATGCG-TTGGTGTCGCAAGAAAAGCTTGTCT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATG-GTTTGCT-TTGCAAG-AAATCTTTTCT
* ** * * *
128460 TTCCACCGTTA--TTGATAGAATCATAGTTTG-ACTCTTAAATAAGACAAACATGAATACTCATG
63 TT--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTC--G
* ** * **
128522 CT-AATG-CAT--ATTCTTTTCTGGATTAGGCACCGT
121 -TAAAAGTC-TCCATTCTTTTCAAGATTA-GAACCAA
* * * * * *
128555 AAACATAGT-CTTCTCA-TAGGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAA-CGCTTTC
1 AAACACATTCCCT-TCATTA-GGATAAATGATATTGATGGTTTGCTTT-GCAAGAAATC-TTTTC
* * * * * * * * *
128617 TTTCCCTCAATTTTTGTAAAGT-ATAAG-TTGATTCCTAAAATTAGACAGACATGGATTCTAGT-
62 TTTGCCT-TATTTTTTTAAAATCA-AAGTTTG-TACCTTAAATAAGACAAACAT-GATTCTCGTA
* * * ** * * *
128679 AAGGATCTTCATTCATTTCGTGATTAGGCACTAT
123 AAAG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * *
128713 AAACAGATTCTCC-TCATTAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCAAG-AAATCTTTTCT
* * * ** **
128777 TTGCCTTATTTTACTTAAAATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTCTCGTAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* * * *
128842 GTCTCCACTCTTTCCAAGATTTGGATCCAA
126 GTCTCCATTCTTTTCAAGA-TTAGAACCAA
* * * * * * *
128872 AACCACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTTTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAG-AAATC-TTTTCT
* *** * ** * * *
128937 TTTCCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAATATGACAAACATGAATACTCATAC
63 TTGCC-TTATT-TTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-
* * * * ** *
129001 TAATTC-CCATTCTTTTTAGGATTAGGCTCCAT
123 AAAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * *
129033 AAACATAGT-CTTCTCATAAGGATAAAGGATATTGATGATTT-CATTTCGCAAGAAATGCTTTT-
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGC-TTT-GCAAGAAAT-CTTTTC
** * * * * * * * * *
129095 TTCCCACTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGT-AA
62 TTTGC-CTTATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAA
* * * * ** * ** *
129159 GGATCTTCTTTCATTTCGGGATTAGGCATTAT
125 AG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * **
129191 AAACACTTTCTCC-TCTTTAGGATAAATGATATTAATGGTTTTCTTTTGCCTGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTG-CAAGAAATCTTTTCT
* ** * * ** * * ** *
129255 TTGCCTCATTTTCCCTAAAATCAAAGTGTGCATTTTAATTGAGACATGCATTGATTCTCGTAAAG
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
*
129320 GTCTCCATTCTTTTCAAGATTAGGATCCAA
126 GTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * * * * *
129350 AAACACTTTCCATTCAGTAGGATAAATGACATTGATGCTTTGGTGTTGTAAGAGAAGCTTTTTTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AA--TCTTTTC
* *** * ** ** * * *
129415 TTTTCCACCGTTAATGATAAAATCAAAGTTTGTTTCTTAAAAAAGACAAACATGAATACTCATAC
62 TTTGCC-TTATT-TTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACATG-ATTCTCGTA-
* * * * * **
129480 TAA-TCCCCATTTTTTTCAGGATTAG-GCTTCGT
123 AAAGTCTCCATTCTTTTCAAGATTAGAAC--CAA
* * * * ** * * * *
129512 AAACATAGT-CTTCTCATAAGGATGCAGGATATTGATGATTTGGTTATGCAAGAAA-CGCTTT-T
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTT-TGCAAGAAATC-TTTTCT
* * * * * * * * * * * * *
129574 TTCCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATCCTAGT-AA
63 TTGCC-T-TATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAA
* * * * * * *
129638 GGATCTTCATTCATTTCATGATTAAGCACTAT
125 AG-TCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * * *
129670 AAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA-AGAAATCTTTTCT
* * * * * * *
129734 TTGCATTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATACATTGATTCTTGCAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
*
129799 GTCTCCATTCGTTTT-AAGATTGGGAACCAA
126 GTCTCCATTC-TTTTCAAGATT-AGAACCAA
* * * ** * * * *
129829 AAACATATTGCCTTCATTAGGATACATGACGTTGATGCG-TTGGTGTCGCAAGAAAAGCTTGTCT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATG-GTTTGCT-TTGCAAG-AAATCTTTTCT
* ** * * * *
129893 TTCCACCGTTA--TTGATAGATTCAAAGTTTG-ACTCTTAAATAAGACAAAGATGAATACTCATG
63 TT--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTC--G
* ** * *
129955 CT-AATG-CAT--ATTCTTTTCTGGATTAGGCACCAT
121 -TAAAAGTC-TCCATTCTTTTCAAGATTA-GAACCAA
* * * * * *
129988 AAACATAGT-CTTCTCA-TAGGGATAAATGATATTGATGCTTTGGTTTTGCAAGAAA-CGCTTTC
1 AAACACATTCCCT-TCATTA-GGATAAATGATATTGATGGTTT-GCTTTGCAAGAAATC-TTTTC
* * * * * * * * *
130050 TTTCCCTCAATTTTTGTAAAGT-ATAAG-TTGATTCCTAAAATTAGACAGACATGGATTCTAGT-
62 TTTGCCT-TATTTTTTTAAAATCA-AAGTTTG-TACCTTAAATAAGACAAACAT-GATTCTCGTA
* * * ** * * *
130112 AAGGATCTTCATTCATTTCGTGATTAGGCACTAT
123 AAAG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * *
130146 AAACAGATTCTCC-TCATTAAGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCAAG-AAATCTTTTCT
** * * ** **
130210 TTGCCTTAGTTTACTTAAAATCAAGGTTTGTACTTTAAATGGGACATGCATTGATTCTCGTAAAA
63 TTGCCTTA-TTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* * * *
130275 GTCTCCACTCTTTCCAAGATTTGGATCCAA
126 GTCTCCATTCTTTTCAAGA-TTAGAACCAA
* * * * * * *
130305 AACCACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTTTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAG-AAATCTTTTCTT
* *** * ** * * * * *
130370 TTCCACCGTTAATGATAAAATAAAAGTTTGT-CTCTTATATAAGACAAACATGAATACTCATACT
64 TGCC-TTATT-TTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-A
* * ** *
130434 AATTC-CCATTCTTTTCAGGATTAGGCTCCAT
124 AAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * *
130465 AAACATAGT-CTTCTCATAAGGATAAAGGATATTGATGATTT-CATTTCGCAAGAAATGC-TTT-
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGC-TTT-GCAAGAAAT-CTTTTC
* * * * * * * * * *
130526 TTTCCAACTAATTTTTGTAAATTCTATGTTCG-AGCCTCAAATAAGGCAAACATGGATTCTAGT-
62 TTTGC--CTTATTTTTTTAAAATCAAAGTTTGTA-CCTTAAATAAGACAAACAT-GATTCTCGTA
* * * * ** * ** *
130589 AAGGATCTTCTTTCATTTCGGGATTAGGCATTAT
123 AAAG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * * * *
130623 AAACACTTTTTCC-TCTTTAGGATAAATAATATTAATGGTTTTCTTTTTCCTAGAAATCTTTTCT
1 AAACAC-ATTCCCTTCATTAGGATAAATGATATTGATGGTTTGC--TTTGCAAGAAATCTTTTCT
* ** * ** * * ** * * *
130687 TTGCCTCATTTTCCCTAAAATCAAAGTTTGCATTTTAATTGAGACATGCATTGATTCCCATAAAG
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* * *
130752 GTCTCCACTCTTTCCAAGATTAGGATCCAA
126 GTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * *
130782 AAACACTTTCCCTTCATTAGGATAAATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTCTTTT-
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AA--TCTTTTC
* * ** * * * * *
130846 TTTCCACCGTTA--ATGATAAAATCAAAGTTT-TTCTCTTAAATAAGACAAACATTAATACCCAT
62 TTT--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACA-TGATTCTCGT
* * * * * * *
130908 ACTAA-TCCCCATTGTTTTTAGGATTAG-TCTCCA
122 A-AAAGTCTCCATTCTTTTCAAGATTAGAAC-CAA
* * * ** * * * * * *
130941 TAA-ACATGT-CTTCTCATAAGGATGCAGGATATTCATGATTAGGTTATGCAAGAAA-CGCTTT-
1 AAACACAT-TCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTT-TGCAAGAAATC-TTTTC
* * * * * * * * * * * *
131002 TTTCCCATCAATTTCTGTAAATTCTATGTTCGTGCCTCAAATGAGACAAACATAGATTCTAGT-A
62 TTTGCC-T-TATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAA
* * * ** *
131066 AGGATCTTCATTCATTTCGGGATTAG-GCACAA
124 AAG-TCTCCATTCTTTTCAAGATTAGAAC-CAA
* * * * * * *
131098 TAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
1 -AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA-AGAAATCTTTTC
* * * * ** * *
131162 TTTGCCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAGGCATTGATTCTTGCAAA
62 TTTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAA
* *
131227 AGTCTCCATTCATTTT-AAGATTGGGAACAAA
125 AGTCTCCATTC-TTTTCAAGATT-AGAACCAA
* * * * * * * *
131258 AAACACATTGCCTTCATTAGGATACATGATGTTGATGCTTTGGTGTCGCAAGAAAAGCTTGTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAG-AAATCTTTTCTT
* ** * ** *
131323 TCCACCGTTA--TTGATAGAATCAAAGTTTG-ACTCTTACGTAAGACAAACATGAATACTCATGC
64 T--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTC--G-
* ** * **
131385 T-AATG-CAT--ATTCTTTTCTGGATTAGGCACCGT
121 TAAAAGTC-TCCATTCTTTTCAAGATTA-GAACCAA
* * * * * *
131417 AAACATAGT-CTTCTCA-TAGGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAA-CGCTTTC
1 AAACACATTCCCT-TCATTA-GGATAAATGATATTGATGGTTTGCTTT-GCAAGAAATC-TTTTC
* * * * * * * * * *
131479 TTTCCCTCAATTTTTGTAAAGT-ATAAG-TTGATTCCTAAAATTAGACAGACATGGATACTAGT-
62 TTTGCCT-TATTTTTTTAAAATCA-AAGTTTG-TACCTTAAATAAGACAAACAT-GATTCTCGTA
* ** * ** * * *
131541 AAGGATCTTTATTCATTTCGTGATTAGGCACTAT
123 AAAG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * **
131575 AAACAGATTCTCC-TCATTAAGATAAAGGATATTGATGGTTTTCTTTTGCTTGAAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCAAG-AAATCTTTTCT
* * ** **
131639 TTGCCTTATTTTACTTAAAATCAAAGTTTGTACTTTAAATGGGACAGGCATTGATTCTCGTAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* * *
131704 GTCTCCACTCTTTCCAAGATTCAGATCCAA
126 GTCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * * * *
131734 AAACACTTTCCCTTGATTAGGATAAATGACATTGATGCTTTGGTGCTGCAAGAGAAGCTTTTTTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATC-TTTTCT
* * ** * * **
131799 TTCACCGTTA--ATGATAAAATAAAAGTTTGT-CTCTTAAATAAGACAAACATGAATACTCACAC
63 TT-GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-
* * * * * *
131861 TAATTC-CCATTCTTTTTAGGATTAGGCACCAT
123 AAAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * * * *
131893 AAACATAGT-CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGTAAGAAATGCTTTT-T
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTTT-GCAAGAAAT-CTTTTCT
*** * * * * * * * * * *
131956 CCCCCTAATTTTTGTAAATTCTATGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGT-AAGG
63 TTGCCTTATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAAAG
* * * ** * *
132020 ATCTGCTTTCATTTCGTGATTAGACACTAT
127 -TCTCCATTCTTTTCAAGATTAGA-ACCAA
* *
132050 AAACACATTCTCCTT-AATAGGATAAATGATATTGATGGTTTTCTTTGGCAAGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGCTTT-GCAA-GAAATCTTTTCT
** * **
132114 TTGCCTTATTTTCTTTAAAATCAAAGTTTGTATTTTAAATGAGACATGCATCGATTCTCGTAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAAA
132179 GTCTCCATTCTTTTCAAGATTGAGAACCAA
126 GTCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * * *
132209 AAACACATTCCTTTCATTAGGATAAATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
* * ** * * * **
132274 TCCACTGT-TATTGATAGAATCAAA----G----TT--ATAAGACAAACATTAATAT-TCATACT
64 TGC-CT-TATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGAT-TCTCGTAAA
** * **
132327 AGTC-CACATTCTTTTCTGGATTAGGCACTGTA
125 AGTCTC-CATTCTTTTCAAGATTA-GAAC-CAA
* * * * * ** * * *
132359 AAA-ATAGT-CTTCTCATAAAGATTCAGGATATTGATGATTTGGCTTCGCAAGAAACTCTTTT-T
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTT-GCTTTGCAAGAAA-TCTTTTCT
** ** * * ** * * * * * * * *
132421 TCCCACCAATTTTTGTAAATTTTAAGTTCGTGCCTCAAATGAGATAGACATGGATTCTAGT-AAG
63 TTGC-CTTATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAAA
* * * * * *
132485 GATCTTCATTCATTTCATGATTATGCACTAT
126 G-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * ** *
132516 AAACACATTCTCC-TCATTAGGATACATGATATTGATGGTTTTCTTTTGCGTGGAAAACTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGC-AAGAAATCTTTTCT
* * * * * **
132580 TTGCCTTATTTTCCTTAAAA-AAAAGTTTGTACTTTAAATGAGGCATGCATTGATTCTCGTAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* * * *
132644 GTCTACATTCTTTCCAAGATTGGGAACAAA
126 GTCTCCATTCTTTTCAAGATT-AGAACCAA
** * ** * * * *
132674 AAACACATTAACTTCATTAGGATACATGGCATTGATGCTTTGGTGTTGTAAGAGAAGCTTTTCTG
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCT-
** * ** * * * *
132739 TCCACCGTTA--ATGATAAAATCAAAGTTTAT-CTCTTAAATAAGGCAAACATGAATACTCATAC
63 T-TGCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-
* * * *
132801 TAA-TCCCCATTCTTTTC-AGAATTAGGCACCAT
123 AAAGTCTCCATTCTTTTCAAG-ATTA-GAACCAA
* * * * * * *
132833 AAACATAGT-CTTCTCATAAGGATACA-GAATATTGATGTTTTGGTTTCGCAAGAAATAC-TTT-
1 AAACACATTCCCT-TCATTAGGATAAATG-ATATTGATGGTTTGCTTT-GCAAGAAAT-CTTTTC
* * * * * * * * ** * * *
132894 TTTCCCATCAATTTCTGTAAATTCTATGTTCGTGGCTCAAATGAGACAAACAGGGATTCTAC-T-
62 TTTGCC-T-TATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCT-CGTA
* * * ** * * *
132957 AAGGATCTTCATTCATTTCGTGATTAGGCACTAT
123 AAAG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * * *
132991 AAACATATT-CTTCTCATTAGGACAAATGATATTTAAGGTTTTCTTTGCATGAAAATCTTTTCTT
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTTTGCAAG-AAATCTTTTCTT
* * * **
133055 TGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
64 TGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAAG
* *
133120 TCTCCAATCTTTTCAAGATTGGGAACCAA
127 TCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * * * * *
133149 AAACACATTTCTTTCATTAGGATACATGACATTGATGCTTTGGTATCGCAAGAGAAGC---AC--
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
* ** * * * * *
133209 --CGTTA--TTGATAGAATCAAGGTTTGT-CTCTTAAATAAGACAAACACGAATAT-TCATACTA
64 TGCCTTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-AT-TCTCGTA-AA
* * *
133268 A-TCTACATTCTTTTCTAGATTAGGCACCGTAA
125 AGTCTCCATTCTTTTCAAGATTA-GAACC--AA
* * * * * * *
133300 AAATA-A--CCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTTGCAAGAAATGCTTTT-T
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTT-GCTTTGCAAGAAAT-CTTTTCT
** ** * * * * * * *
133361 TCCCACCAATTTTTGTAAATTCTAAGTTTGTGCC---AATGAGACAAACATGAATTCTAGT-AAG
63 TTGC-CTTATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACATG-ATTCTCGTAAAA
* * * * ** * * *
133422 GATCTTCTTTCATTCCGGGATTAAGCACTAT
126 G-TCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * * * *
133453 AAATACAAT-CTTCTCATCAGGATATACGATATTGATAGTTTTCTTTTGCATTA-AAATCTTTTC
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA--AGAAATCTTTTC
* * * ** *
133516 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATCGATTCTTGTAAA
62 TTTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAAA
* *
133581 AGTCTCCATTCTTTTTAAGATTGGGAACCAA
125 AGTCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * ** * *
133612 AAACACATTCCTTTCATTAGGATACATGATATT-AGTGCTTTGGCGTCACAAGAGAAGCTTGTCT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGA-TGGTTT-GCTTTGCAAGA-AATCTTTTCT
* ** * * * *
133676 TTCCACCGTTA--TTCATAGAATCAAGGTTTGT-CTCTTAAATAAGACAAACACGAATAT-TCAT
63 TT--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-AT-TCTCGT
* * * * *
133737 ACTAA-TCTACATTCTTTTCTAGATTAGGCACCGTA
122 A-AAAGTCTCCATTCTTTTCAAGATTA-GAACC-AA
* * * * * * * * * *
133772 AAA-ATAGT-CTTCTCATAAAGATACAGGATATTGATGATTTGGCTTCGGAAGAAA-CTATTT-T
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTT-GCTTTGCAAGAAATCT-TTTCT
* ** * ** * * * * * * * *
133833 TTCCCACCAATTTGGTAAATTCTAAGTTCGTGCCTCAAATCAA-ACAGACATAAATTCTAGT-AA
63 TTGCC-TTATTTTTTTAAAATCAAAGTTTGTACCTTAAAT-AAGACAAACAT-GATTCTCGTAAA
* * * ** * * *
133896 GGATCTTCATTCATTTCGTGATTAGGCACTAT
125 AG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* ** * *
133928 AAACACATTTTCC-TCATTAGGATACTTGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
1 AAACACA-TTCCCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA-AGAAATCTTTTCT
* * ** * ** * *
133992 TTGCCTTATTTTCCTTAAAATCAAATTTTGTATTTTAAATGAGACATGCATTGATTCTTGCAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
134057 GTCTCCATTCTTTTCAAGATTGAGAACCAA
126 GTCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * * * * * *
134087 AAACAAATTTCTTTCATTAGGATACATGACATTGATGCTTTGGTCTCGCAAGAAAAGCCTTTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAG-AAATCTTTTCTT
** ** * * * * *
134152 T-CCATCGTTATTAATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACATAAATACTCATACT
64 TGCC-TTATT-TTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACAT-GATTCTCGTA-A
*** * *
134215 AA-TC-CACATTCTTTTTTGGATTAGGCACCAT
124 AAGTCTC-CATTCTTTTCAAGATTA-GAACCAA
** * * * * * * * * *
134246 AAACGTAGT-CTTCTCA-CAGGGATACATGATAATGATGCTTTGGATTCGCAAGAAACGCTTCCC
1 AAACACATTCCCT-TCATTA-GGATAAATGATATTGATGGTTT-GCTTTGCAAGAAA-TCTT---
** **** ** * ** ** ** * *
134309 CCCCCCCCCCACCCCCAATTTTTGTAATGT-ATAAGTTCATTTCTCAAATTAGACAAACATAGAT
59 ------TTCTTTGCCTTATTTTTTTAAAATCA-AAGTTTGTACCTTAAATAAGACAAACAT-GAT
* * * * ** *
134373 TCTAGT-AAGGATCTTCATTCATTTCGGGATTAG-GCACAA
116 TCTCGTAAAAG-TCTCCATTCTTTTCAAGATTAGAAC-CAA
* * * * * * * *
134412 TAAACACAAT--C-TCCTT--G-T-CACGATA---CT--TTTAC---AC-GGAAATCTTTTCTTT
1 -AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCTTTGCAAGAAATCTTTTCTTT
* * * * * * *
134461 GCCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAAT--GATAATGCATTGATGCTCATAAAAG
65 GCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAA-ACA-TGATTCTCGTAAAAG
*
134524 TCTCCATTCTTTTCAAGATTGAGACCCAA
127 TCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * ** * * *
134553 AAACACATTCCTTTCATTAGAATACATGACATTGATACTTTGGTCTCGCAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAG-AAATCTTTTCTT
** * ** * * * * * * *
134618 T-CCATCGTTAATGATAGAATCAAAG-TTGT-CTCTTAAATACGACAAACAGGAATACCCATACT
64 TGCC-TTATT-TTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-A
* * * * *
134680 AA-TCCCCATTCTTTTTAGGATTAGGCACCAT
124 AAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* ** * * * * * * *
134711 AAGCGTAGT-CTTCTCATAAGGATACATGATATTGATGCTTTGGTTT-CGAGAGATATGC-TTTC
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTTTGC-A-AGAAAT-CTTTTC
* ** * * * * ** ** * * *
134773 TTCGCACCAATTTGTGTAAAGT-ATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGT-A
62 TTTGC-CTTATTTTTTTAAAATCA-AAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTAA
** * * * * * *
134836 GGGATCTTCATTCATTTCAGGATTAGGCACTAT
124 AAG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * *
134869 AAACACGTTCTCCTT-TTTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA-AGAAATCTTTTCT
* * * * ** * *
134933 TTGCCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAGACATGCATTGATTCTTGCAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
134998 GTCTCCATTCGTTTT-AAGATTAGGAACCAA
126 GTCTCCATTC-TTTTCAAGATTA-GAACCAA
* ** * * * * *
135028 AAACACATTCCCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCGTAAGAGAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
** * ** ** * *
135093 T-CCACCATTAATGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGAACACTCATACT
64 TGCC-TTATT-TTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-A
* * * * *
135156 AATTC-CCATTCTTTTCAGGATTAGGCACTAT
124 AAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * * * *
135187 AAACATAGT-CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCACAAGAAATGCTTTT-T
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTTT-GCAAGAAAT-CTTTTCT
** * * * * * * * * * *
135250 TCCCACTAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATTGATTCTAGT-AAG
63 TTGC-CTTATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* * ** * * * *
135314 GATCTGCATTCATTTCGTGATTGGGCACTAT
126 G-TCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * *
135345 AAACACATTCTCTTAAATAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCATTTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA-AGAAATCTTTTCTT
* * ** * ** *
135410 TGCCTTATTTTCCTTAAAATCAAAGTTTATATTTTAAATGAGACATGCATTGATTCGCGTAAAAG
64 TGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAAG
*
135475 TCTCCATTCTTTTCAAGATTGAGACCCAA
127 TCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * **** * *
135504 AAACAAATTCCTTTCATTAGAATACATGACATTGGCACTTTGGTCTTGCAAGAGAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
* * ** * * * *
135569 TCCACCGTTA--CTAATAGAATAAAAGTTTGT-CTCTTAAATAAGACAAACATGAATACTCATAC
64 T--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-
* *** * *
135631 TAA-TC-CACATTCTTTTTTGGATTAGGCACCAT
123 AAAGTCTC-CATTCTTTTCAAGATTA-GAACCAA
* * * * * *
135663 AAACATAAT-CTTCTCATAAGGATACATG--ATT--TGGTTT-C---GCAAGAAA-CGATTT-TT
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTTTGCAAGAAATC-TTTTCTT
* * * * * * * ** *
135717 TCCCTCCAATTTTTGTAAATTCTAAGTTTGT-GCTTCAAATGAGACAAATGTGGATTCTAGT-AA
64 TGCCT--TATTTTTTTAAAATCAAAGTTTGTACCTT-AAATAAGACAAACAT-GATTCTCGTAAA
* * * ** * * *
135780 GGATCTTCATTCATTTCGTGATTAGGCACTAT
125 AG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * ** *
135812 AAACACATTCTCTTCATCAGGATACATGATATTGATGGTTTTTTTTTGCATGAAAATCTTTTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGG-TTTGCTTTGCAAG-AAATCTTTTCTT
* * * * ** *
135877 TGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTTGTAAAAG
64 TGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAAG
* * *
135942 TCTCCATT-TGTTTTAAGGTTGGGAACCAA
127 TCTCCATTCT-TTTCAAGATT-AGAACCAA
* * * * * * *
135971 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTGTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
* ** * * * *
136036 TCCACCGTTA--TTGATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATACCCATAC
64 T--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-
* * * * * * *
136098 TAA-TCCCCTTTCCTTTCAGGATTAGGCACCAT
123 AAAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * * * * * * * * *
136130 AAACATAGT-CTTCTCATAAGCATACATGATGTTGATGCTGTGGTTTCGCAACATA-CGCTTTCT
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTTT-GCAAGAAATC-TTTTCT
** * * * ** * * * *
136193 TCCCACCTATTTTTGTAAAGT-ATAAGTTCATTCCTCAAATTAGGCAAACATGGATTCT--TATA
63 TTGC-CTTATTTTTTTAAAATCA-AAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTA-A
* * * ** * * * *
136255 AGGATCTTCATCCATTTT-GGGATTCGGCACTAT
124 AAG-TCTCCATTC-TTTTCAAGATT-AGAACCAA
* * *
136288 AAACACATTCTCC-TCATTAGGATAAATGATATTGATAGTTTTCTTTTGCATGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA-AGAAATCTTTTCT
* ** * * ** **
136352 TTGCCTCGATTTCCTTAAAATCAAATTTTGTACTTTAAATGGGACATGCATTGATTCTCGTAAAA
63 TTGCCT-TATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* *
136417 GTCTCCATTCTTTCCAAGATTGGGAACCAA
126 GTCTCCATTCTTTTCAAGATT-AGAACCAA
* * * * * * * *
136447 AAACACATTCCCTTTATTAGGATACATGACATTAATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
** * *
136512 T-CCAACATTTTTGATAAAATCAAAG--TCTACCTCTTAAATAAGAC-AA-AT-A------T-AA
64 TGCC-TTATTTTT-TTAAAATCAAAGTTTGTA-C-CTTAAATAAGACAAACATGATTCTCGTAAA
* *
136564 A-TACT-CATACTCTTT-AAGATTAGGCACC-A
125 AGT-CTCCATTCT-TTTCAAGATTA-GAACCAA
* ** * * * * *
136593 TAA-ACATTGTCTTC-TCATACGGATACAGGATATTGATGATTTGGTTTTGCAAGAAACGCTTTT
1 AAACACATTCCCTTCAT--TA-GGATAAATGATATTGATGGTTT-GCTTTGCAAGAAA-TCTTTT
** ** * * ** * * * *
136656 C-TCCCACCAATTTTTGTAAATTTTAAGTTCT-TGCCTTAAATGAGACAGACATGGATTCTAGT-
61 CTTTGC-CTTATTTTTTTAAAATCAAAGTT-TGTACCTTAAATAAGACAAACAT-GATTCTCGTA
* * ** * * *
136718 AAGGATCTTCATT-TATTTCGTGATTAGGCACTAT
123 AAAG-TCTCCATTCT-TTTCAAGATTA-GAACCAA
* * * * * **
136752 ACACACATTCTCC-TCCTTAGGATACAA-GGTATTGATGGTTTTCTTATACGTGAAAATCTTTTC
1 AAACACATTC-CCTTCATTAGGATA-AATGATATTGATGGTTTGCTT-TGCAAG-AAATCTTTTC
* * * * **
136815 TTTGCCTTATTTTCCTTGAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
62 TTTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAA
* *
136880 AGTCCCCATTCTTTTCAAGATTAGGATCCAA
125 AGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * ** * * * ** *
136911 AAACTCATTTCCTTCATTAAGATACGTGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT-TT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
* * * ** ** * * *
136975 TTCAC-CATTAATGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACACAAATACTCATACT
64 TGC-CTTATT-TTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACA-TGATTCTCGTA-A
* * * *
137038 AA-TCCCCATTCTTTTCAGGATTAGGCACCAT
124 AAGTCTCCATTCTTTTCAAGATTA-GAACCAA
** * * * * * * * *
137069 AAACGTAGT-CTTCTCATAAAGAT-ACTGGATATTGATGATTTGGTTTGACAAGAAA-CGATTT-
1 AAACACATTCCCT-TCATTAGGATAAAT-GATATTGATGGTTTGCTTTG-CAAGAAATC-TTTTC
* * * * * * ** *
137130 TTTCCCTCCAATTTTTGTAAATTCTAAGGTTTG---CTTCAAATGAGACAAATGTGGATTCTAGT
62 TTTGCCT--TATTTTTTTAAAATC-AAAGTTTGTACCTT-AAATAAGACAAACAT-GATTCTCGT
* * * ** * * *
137192 -AAGGATCTTCATTCATTTCGTGATTAGGCACTAT
122 AAAAG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * * ** *
137226 AAACACATTCTCTTCATCAGGATACATGATATTGATGGTTTTTTTTTGCATGGAAATCTTTTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGG-TTTGCTTTGCA-AGAAATCTTTTCTT
** * * * ** *
137291 TGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTTGTAAAAG
64 TGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAAG
* * *
137356 TCTCCATT-TGTTTTAAGATTGGGAACGAA
127 TCTCCATTCT-TTTCAAGATT-AGAACCAA
* * * * * * * * *
137385 AAACACATTCCCTTCTTTAGGATACATGACATTGTTGCTTTGGTGTCGCAAGAGAAGCTTGTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
* ** * * * * *
137450 TCCACCGTTA--TTGATAGAATCAAAGTTTGT-CTTTTAAATAAGACAAACATGAATACCCATAC
64 T--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-
* * * * *
137512 TAA-TGC-CCTTTCTTTTTAGGATTAG-GCACAA
123 AAAGT-CTCCATTCTTTTCAAGATTAGAAC-CAA
* * * * * * * * * * *
137543 TAAACATAGT-CTTCTCGTAAGGATACATGATATTGATGCTTTGGTTTCACAACAAA-CGCTTTC
1 -AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTTT-GCAAGAAATC-TTTTC
* * * ** * * * * *
137606 -TTCCCTCCTATTTTTGTAAAGT-ATAAGTTCATTCCTCAAATTAGAAAAACATGGATTCTTGT-
62 TTTGCCT--TATTTTTTTAAAATCA-AAGTTTGTACCTTAAATAAGACAAACAT-GATTCTCGTA
* * * ** * * * *
137668 AAGGATCTTCATTCATTTCGTGATTCGGCACTAT
123 AAAG-TCTCCATTCTTTTCAAGATT-AGAACCAA
* * * **
137702 AAAGACATTCTCC-TCATTAGGAT--A-GATATTGATAGTTTTCTTTTGCCTGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTG-CAAGAAATCTTTTCT
* * * * * *
137763 TTGCCTTATTTTCCTCAAAACCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* * *
137828 GTCCCCATTCTTTTCAAGATTTGGATCCAA
126 GTCTCCATTCTTTTCAAGA-TTAGAACCAA
* * * ** * * * *
137858 AAACTCATTTCCTTCATTAGGATACATGGCATTGATGCTTTGGTATCGCAAGAGAAGCTTTT-TT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
* * * ** * * *
137922 T-TCTACCATTAATGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACACGAATACTCATAC
64 TGCCT--TATT-TTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-
* * * * *
137985 TAA-TCCCCATTCTTTTCAGGATTAGGCACCAT
123 AAAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * * * * * * * *
138017 AAACATAGT-CTTCTCATAAAGAT-ACTGGATAATGCTGATTTGGTTACGCAAGAAA-CGATTT-
1 AAACACATTCCCT-TCATTAGGATAAAT-GATATTGATGGTTTGCTT-TGCAAGAAATC-TTTTC
* * * * ** * * * * *
138078 TTTCCCTCCAATTTTTGTAAATTTTAAGTTTAT-GCTTCAAATGAGACAAACGTGGATTCTAGT-
62 TTTGCCT--TATTTTTTTAAAATCAAAGTTTGTACCTT-AAATAAGACAAACAT-GATTCTCGTA
* * * * * * *
138141 AAGGATCTTCATTCATTTCATGATTAGGCACTAT
123 AAAG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * ** * * *
138175 AAACACATTCTCC-TCATCAGGATACATGATATTGATGGTTTTTTTTTTGCATGGAAATATTTTT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGG--TTTGCTTTGCA-AGAAATCTTTTC
** * * * ** *
138239 TTTGCCTTATTTTCCATAAAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTTGTAAA
62 TTTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAA
* * *
138304 AGTCTCAATT-TGTTTGAAGATTGGGAACCAA
125 AGTCTCCATTCT-TTTCAAGATT-AGAACCAA
* * * * * * * * *
138335 AAACTCATGCCCTTCATTAGGATACATGACATCGATGCTTTGGTGTTGCAAGAGAAGCTTGTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
* ** * * * * *
138400 TCCACCGTTA--TTGATAGAATCAAAGTTTGT-CTCTTAAATAAGACAGACATGAATACCCATAC
64 T--GCC-TTATTTTTTTAAAATCAAAGTTTGTAC-CTTAAATAAGACAAACATG-ATTCTCGTA-
* * * ** * *
138462 TAA-TC-CCTTTCCTTTCCGGATTAGGCACCAT
123 AAAGTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * * * * * * * *
138493 AAACATAGT-CTTCTCATAAGCATACATGATATTGATGCTGTGCTTTCGCAACATA-CGCTTTCT
1 AAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGCTTT-GCAAGAAATC-TTTTCT
** * * * ** * * * *
138556 TCCCACCTATTTTTGTAAAGT-ATAAGTTCATTCCTAAAATTAGACAAACAAGGATTCT--TATA
63 TTGC-CTTATTTTTTTAAAATCA-AAGTTTGTACCTTAAATAAGACAAAC-ATGATTCTCGTA-A
* * ** * * *
138618 AGGATCTTCATTCATTTT-GTGATTCGATACTAT
124 AAG-TCTCCATTC-TTTTCAAGATTAGA-ACCAA
* * *
138651 AAACACATTCTCC-TCATTAGGATAAATGATATTGATAGTTTTCTTTTGCATGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA-AGAAATCTTTTCT
** * * ** ** *
138715 TTGCCTCGTTTTCCTTAAAATCAAAGTTTGTACTTTAAATGGGACATGCATTAATTCTCGTAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACA-TGATTCTCGTAAAA
* *
138780 GTCTCCATTCTTTCCAAGATTGGGAACCAA
126 GTCTCCATTCTTTTCAAGATT-AGAACCAA
** * * ** * * * *
138810 AAACACATTCCCTTCATTAGGATACGTGACATTAATACTTTGGTGTCGCAAAAGAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCT-TTGCAAGA-AATCTTTTCTT
** ** * * * *
138875 T-CCAACATTATTGATAAAATCAAAG--TCTACCTCTTAAATAAGACAAATATGAATACTCATAC
64 TGCC-TTATT-TTTTTAAAATCAAAGTTTGTA-C-CTTAAATAAGACAAACATG-ATTCTCGTA-
* * *
138937 TAA-TC-CACATTCTTTTCAAGATTAGGCACCAT
123 AAAGTCTC-CATTCTTTTCAAGATTA-GAACCAA
* ** * * * *
138969 AAACATAGTTTTC-TCA-TACGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTT-
1 AAACACA-TTCCCTTCATTA-GGATAAATGATATTGATGGTTTGCTTT-GCAAGAAA-TCTTTTC
* * * ** * * * * * *
139031 TTCTGACC-AATTTTTGTAAATTTTAAGTTCT-TGCCTTAAATGAGACAGACATTAATTCTAG-C
62 TT-TG-CCTTATTTTTTTAAAATCAAAGTT-TGTACCTTAAATAAGACAAACA-TGATTCTCGTA
* * * ** * * *
139093 AAAGATTTTCATTCATTTCGTGATTAGGCACTAT
123 AAAG-TCTCCATTCTTTTCAAGATTA-GAACCAA
* * *
139127 ATACACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
1 AAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGC-TTTGCA-AGAAATCTTTTCT
* * * * * * *
139191 TTGCCTTATTTTCCTCAAAACCAAAGTTTGTACTTTAAATGAGACAAGCTTTGATTCTCGTAAAA
63 TTGCCTTATTTT-TTTAAAATCAAAGTTTGTACCTTAAATAAGACAAAC-ATGATTCTCGTAAAA
* * *
139256 ATCCCCATTCTTTTCAAGATTAGGATCCAA
126 GTCTCCATTCTTTTCAAGATTA-GAACCAA
* * * * *
139286 AAACTCATTTCCTTCATTAGGATACATGACATTGATGCTTTG
1 AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTG
139328 GTGTCGCAAG
Statistics
Matches: 10276, Mismatches: 3375, Indels: 2194
0.65 0.21 0.14
Matches are distributed among these distances:
139 4 0.00
140 40 0.00
141 25 0.00
142 2 0.00
143 4 0.00
144 1 0.00
145 9 0.00
146 30 0.00
147 64 0.01
148 49 0.00
149 241 0.02
150 30 0.00
151 12 0.00
152 8 0.00
153 10 0.00
154 9 0.00
155 161 0.02
156 192 0.02
157 594 0.06
158 2880 0.28
159 4335 0.42
160 874 0.09
161 390 0.04
162 236 0.02
163 8 0.00
164 2 0.00
165 2 0.00
166 4 0.00
167 55 0.01
168 3 0.00
169 2 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (154 bp):
AAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGCTTTGCAAGAAATCTTTTCTTTG
CCTTATTTTTTTAAAATCAAAGTTTGTACCTTAAATAAGACAAACATGATTCTCGTAAAAGTCTC
CATTCTTTTCAAGATTAGAACCAA
Found at i:139375 original size:159 final size:158
Alignment explanation
Indices: 136833--139955 Score: 1024
Period size: 159 Copynumber: 19.8 Consensus size: 158
136823 ATTTTCCTTG
* *
136833 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCATTCTTTTCAA
1 AAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCTTTTCAA
* * * * * *
136898 GATTAGG-ATCCAAAAACTCATTTCCTTCATTAAGATACGTGACATTGATGCTTTGGTGTCACAA
66 GATTAGGCA-CCATAAACTCATTTCC-TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAA
**
136962 GAGAAGCTTTTTTTT-CACCATTAATGATA
129 GAGAAGCTTTTTTTTCCACCATTTTTGATA
* * *** * * **
136991 AAATCAAAGTTTGT-CTCTTAAATAAGACAAACACAAATACTCATACTAATCCCCATTCTTTTCA
1 AAATCAAAGTTTGTACT-TTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCTTTTCA
* * * *
137055 GGATTAGGCACCATAAACGT-AGTCTT-CTCATAAAGATAC-TGGATATTGATGATTTGGTTT-G
65 AGATTAGGCACCATAAAC-TCA-T-TTCCTCATTAGGATACAT-GATATTGATGCTTTGGTTTCG
* * *
137116 ACAAGA-AA-CGATTTTTTCCCTCCAATTTTTG-TA
126 -CAAGAGAAGC-TTTTTTTTCCACC-ATTTTTGATA
* * * * ** ** *
137149 AATTCTAAGGTTTG--CTTCAAATGAGACAA--ATGTGGATTCTAGTAAGGATCTTCATTCATTT
1 AAATC-AAAGTTTGTACTTTAAATGAGACAAGCAT-T-GATTCTCGTAAAAATCCCCATTCTTTT
** * * * * * ** *
137210 CGTGATTAGGCACTATAAACACATTCTCTTCATCAGGATACATGATATTGATGGTTTTTTTTTGC
63 CAAGATTAGGCACCATAAACTCATT-TCCTCATTAGGATACATGATATTGATGCTTTGGTTTCGC
* * * ** **
137275 ATG-GAAATCTTTTCTTTGCC-TTATTTTCCATA
127 AAGAG-AAGCTTTT-TTTTCCACCATTTTTGATA
* * * * * *
137307 AAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTTGTAAAAGTCTCCATT-TGTTTTA
1 AAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCT-TTTCA
* * * * * * * * * *
137371 AGATTGGGAACGAAAAACACATTCCCTTCTTTAGGATACATGACATTGTTGCTTTGGTGTCGCAA
65 AGATTAGGCACCATAAACTCATTTCC-TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * *
137436 GAGAAGCTTGTCTTTCCACCGTTATTGATA
129 GAGAAGCTTTTTTTTCCACCATTTTTGATA
* * * * * * ** * * *
137466 GAATCAAAGTTTGT-CTTTTAAATAAGACAAACA-TGAATACCCATACTAATGCCCTTTCTTTTT
1 AAATCAAAGTTTGTAC-TTTAAATGAGACAAGCATTG-ATTCTCGTAAAAATCCCCATTCTTTTC
* * * * *
137529 AGGATTAGGCACAATAAACAT-AGTCTT-CTCGTAAGGATACATGATATTGATGCTTTGGTTTCA
64 AAGATTAGGCACCATAAAC-TCA-T-TTCCTCATTAGGATACATGATATTGATGCTTTGGTTTCG
* * * *
137592 CAACA-AACGC-TTTCTTCCCTCCTATTTTTG-TA
126 CAAGAGAA-GCTTTTTTTTCCACC-ATTTTTGATA
* ** * * * * * * * * ** ** * *
137624 AAGT-ATAAGTTCATTCCTCAAATTAGAAAAACATGGATTCTTGTAAGGATCTTCATTCATTTCG
1 AAATCA-AAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCTTTTCA
* * * ** ** * *
137688 TGATTCGGCACTATAAAGACATTCTCCTCATTAGGAT--A-GATATTGATAG-TTTTCTTTTGCC
65 AGATTAGGCACCATAAACTCATT-TCCTCATTAGGATACATGATATTGAT-GCTTTGGTTTCGCA
* * * * * **
137749 TG-GAAATCTTTTCTTT--GCCTTATTTTCCTCA
128 AGAG-AAGCTTTTTTTTCCACCAT-TTTTGAT-A
* *
137780 AAACCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCCCCATTCTTTTCAA
1 AAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCTTTTCAA
* * ** *
137845 GATTTGG-ATCCAAAAACTCATTTCCTTCATTAGGATACATGGCATTGATGCTTTGGTATCGCAA
66 GATTAGGCA-CCATAAACTCATTTCC-TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAA
* **
137909 GAGAAGCTTTTTTTTCTACCATTAATGATA
129 GAGAAGCTTTTTTTTCCACCATTTTTGATA
* * * * * **
137939 AAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-CGAATACTCATACTAATCCCCATTCTTTTC
1 AAATCAAAGTTTGTACT-TTAAATGAGACAAGCATTG-ATTCTCGTAAAAATCCCCATTCTTTTC
* * * * * * *
138002 AGGATTAGGCACCATAAACAT-AGTCTT-CTCATAAAGATAC-TGGATAATGCTGATTTGGTTAC
64 AAGATTAGGCACCATAAAC-TCA-T-TTCCTCATTAGGATACAT-GATATTGATGCTTTGGTTTC
* * *
138064 GCAAGA-AA-CGATTTTTTCCCTCCAATTTTTG-TA
125 GCAAGAGAAGC-TTTTTTTTCCACC-ATTTTTGATA
* ** * * * * * * * ** ** * *
138097 AATTTTAAGTTTATGCTTCAAATGAGACAAACGTGGATTCTAGTAAGGATCTTCATTCATTTCAT
1 AAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCTTTTCAA
* * * * ** * *
138162 GATTAGGCACTATAAACACATTCTCCTCATCAGGATACATGATATTGATGGTTTTTTTTTTGCAT
66 GATTAGGCACCATAAACTCATT-TCCTCATTAGGATACATGATATTGAT-GCTTTGGTTTCGCAA
** ** **
138227 G-GAAATATTTTTTTTGCC-TTATTTTCCATA
129 GAG-AAGCTTTTTTTT-CCACCATTTTTGATA
* * * * * * *
138257 AAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTTGTAAAAGTCTCAATT-TGTTTGA
1 AAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCT-TTTCA
* * * ** * *
138321 AGATTGGGAACCAAAAACTCATGCCCTTCATTAGGATACATGACATCGATGCTTTGGTGTT-GCA
65 AGATTAGGCACCATAAACTCATTTCC-TCATTAGGATACATGATATTGATGCTTTGGT-TTCGCA
* * * *
138385 AGAGAAGCTTGTCTTTCCACCGTTATTGATA
128 AGAGAAGCTTTTTTTTCCACCATTTTTGATA
* * * * * ** * *
138416 GAATCAAAGTTTGT-CTCTTAAATAAGAC-AGACA-TGAATACCCATACTAAT-CCCTTTCCTTT
1 AAATCAAAGTTTGTACT-TTAAATGAGACAAG-CATTG-ATTCTCGTAAAAATCCCCATTCTTTT
** * * * *
138477 CCGGATTAGGCACCATAAACAT-AGTCTT-CTCATAAGCATACATGATATTGATGCTGTGCTTTC
63 CAAGATTAGGCACCATAAAC-TCA-T-TTCCTCATTAGGATACATGATATTGATGCTTTGGTTTC
* * * * *
138540 GCAACATACGC-TTTCTTCCCACCTATTTTTG-TA
125 GCAAGAGAAGCTTTTTTTTCCACC-ATTTTTGATA
* ** * * * * * ** ** ** **
138573 AAGT-ATAAGTTCATTCCTAAAATTAGACAAACAAGGATTCTTATAAGGATCTTCATTCATTTT-
1 AAATCA-AAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTC-TTTTC
** * ** * * * ** *
138636 GTGATTCGATACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATAG-TTTTCTTTTGC
64 AAGATTAGGCACCATAAACTCATT-TCCTCATTAGGATACATGATATTGAT-GCTTTGGTTTCGC
* * * * * ***
138700 ATG-GAAATCTTTTCTTTGCC-TCGTTTTCCTTA
127 AAGAG-AAGCTTTT-TTTTCCACCATTTTTGATA
* * * * * *
138732 AAATCAAAGTTTGTACTTTAAATGGGACATGCATTAATTCTCGTAAAAGTCTCCATTCTTTCCAA
1 AAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCTTTTCAA
* * * * * * * * * * *
138797 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACGTGACATTAATACTTTGGTGTCGCAAA
66 GATTAGGCACCATAAACTCATTTCC-TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * *
138862 AGAAGCTTTTCTTTCCAACATTATTGATA
130 AGAAGCTTTTTTTTCCACCATTTTTGATA
* * * * ** *
138891 AAATCAAAG--TCTACCTCTTAAATAAGACAA--ATATGAATACTCATACTAATCCACATTCTTT
1 AAATCAAAGTTTGTA-CT-TTAAATGAGACAAGCAT-TG-ATTCTCGTAAAAATCCCCATTCTTT
* *
138952 TCAAGATTAGGCACCATAAACAT-AGTTTTCTCA-TACGGATACATGATATTGATGATTTGGTTT
62 TCAAGATTAGGCACCATAAAC-TCA-TTTCCTCATTA-GGATACATGATATTGATGCTTTGGTTT
* *
139015 CGCAAGA-AACGCTTTTTTCT-GACCAATTTTTG-TA
124 CGCAAGAGAA-GCTTTTTTTTCCACC-ATTTTTGATA
* ** * * * * * * *** *
139049 AATTTTAAGTTCT-TGCCTTAAATGAGAC-AGACATTAATTCTAGCAAAGATTTTCATTCATTTC
1 AAATCAAAGTT-TGTACTTTAAATGAGACAAG-CATTGATTCTCGTAAAAATCCCCATTCTTTTC
** * * * * * ** *
139112 GTGATTAGGCACTATATACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCA
64 AAGATTAGGCACCATAAACTCATT-TCCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCA
* * * * * **
139177 TG-GAAATCTTTTCTTT--GCCTTATTTTCCTCA
128 AGAG-AAGCTTTTTTTTCCACCAT-TTTTGAT-A
* *
139208 AAACCAAAGTTTGTACTTTAAATGAGACAAGCTTTGATTCTCGTAAAAATCCCCATTCTTTTCAA
1 AAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCTTTTCAA
* * *
139273 GATTAGG-ATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
66 GATTAGGCA-CCATAAACTCATTTCC-TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAA
***
139337 GAGAAGCTTTTTTTTCCACCATTAACGATA
129 GAGAAGCTTTTTTTTCCACCATTTTTGATA
* * * * * * **
139367 AAATCAAAGTTTAT-CTCTTAAATAAGACAAACA-CGAATACTCATACTAATCCCCATTCTTTTC
1 AAATCAAAGTTTGTACT-TTAAATGAGACAAGCATTG-ATTCTCGTAAAAATCCCCATTCTTTTC
* * * * *
139430 AGGATTAGGCACCATAAACGT-AGTCTT-CTCATAAAGATAC-TGGATATTGTTGATTTGGTTAT
64 AAGATTAGGCACCATAAAC-TCA-T-TTCCTCATTAGGATACAT-GATATTGATGCTTTGGTT-T
*
139492 -GCAAGA-AA-----------CA--ATTCTTG-TA
124 CGCAAGAGAAGCTTTTTTTTCCACCATTTTTGATA
* ** * * * * * * ** ** * *
139511 AATTTTAAGTTTAT-GTTTCAAATGAGACAAACGTGGATTCTAGTAAGGATCTTCATTCATTTCG
1 AAATCAAAGTTTGTACTTT-AAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCTTTTCA
* * * * * * ** * *
139575 TGATTAGGCACTATAAACACATTCTCCTCATCAAGATACATGATATTGATGGTTTTTTTTTGCAT
65 AGATTAGGCACCATAAACTCATT-TCCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * *
139640 G-GAAATCTTTTCTTT--GCCTTTTTTCCATA
129 GAG-AAGCTTTTTTTTCCACCATTTTT-GATA
* * ** * * *
139669 AAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTTATAAAAGTCTCCATT-TGTTTTA
1 AAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCT-TTTCA
* * * * * *
139733 AGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTT-GCA
65 AGATTAGGCACCATAAACTCATTTCC-TCATTAGGATACATGATATTGATGCTTTGGT-TTCGCA
* *
139797 AGAGAAGCTTGTCTTTCCACCATTATTT-ATA
128 AGAGAAGCTTTTTTTTCCACCATT-TTTGATA
* * * * * ** * *
139828 GAATCAAAGTTTGT-CTCTTAGATAAGAC-AGACA-TGAATAC-CATACTAATCCCCTTTCCTTT
1 AAATCAAAGTTTGTACT-TTAAATGAGACAAG-CATTG-ATTCTCGTAAAAATCCCCATTCTTTT
* * * * *
139889 CAGGATTAGGCGCCATAAACAT-AGTCTT-CTCATAAGCATACATGATATTGATGCTGTGGTTTC
63 CAAGATTAGGCACCATAAAC-TCA-T-TTCCTCATTAGGATACATGATATTGATGCTTTGGTTTC
139952 GCAA
125 GCAA
139956 CATATGCTTT
Statistics
Matches: 2107, Mismatches: 664, Indels: 388
0.67 0.21 0.12
Matches are distributed among these distances:
142 1 0.00
143 5 0.00
144 91 0.04
145 8 0.00
147 2 0.00
153 1 0.00
154 6 0.00
155 24 0.01
156 91 0.04
157 166 0.08
158 702 0.33
159 856 0.41
160 135 0.06
161 19 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (158 bp):
AAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAATCCCCATTCTTTTCAA
GATTAGGCACCATAAACTCATTTCCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
GAAGCTTTTTTTTCCACCATTTTTGATA
Found at i:140087 original size:23 final size:23
Alignment explanation
Indices: 140061--140111 Score: 102
Period size: 23 Copynumber: 2.2 Consensus size: 23
140051 ATTCGATACT
140061 ATAAACACATTCTCCTCATTAGG
1 ATAAACACATTCTCCTCATTAGG
140084 ATAAACACATTCTCCTCATTAGG
1 ATAAACACATTCTCCTCATTAGG
140107 ATAAA
1 ATAAA
140112 TGATATTGAT
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
23 28 1.00
ACGTcount: A:0.39, C:0.24, G:0.08, T:0.29
Consensus pattern (23 bp):
ATAAACACATTCTCCTCATTAGG
Found at i:142010 original size:42 final size:42
Alignment explanation
Indices: 141949--142067 Score: 175
Period size: 42 Copynumber: 2.8 Consensus size: 42
141939 TAGCCCTCAA
* *
141949 AGAGAAAGAAGAGAGAGGAGGGATGATAGGAGGAGAGACAAG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAAG
* *
141991 AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGAGACAGG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAAG
* * *
142033 AGAGATAATAGAGAGAGGAGGGATGACAAGAGGAG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAG
142068 GAGAGAAAAA
Statistics
Matches: 69, Mismatches: 8, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
42 69 1.00
ACGTcount: A:0.45, C:0.03, G:0.45, T:0.08
Consensus pattern (42 bp):
AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAAG
Found at i:142028 original size:24 final size:24
Alignment explanation
Indices: 141958--142043 Score: 76
Period size: 24 Copynumber: 3.8 Consensus size: 24
141948 AAGAGAAAGA
* *
141958 AGAGAGAGGAGGGATGATAGGAGG
1 AGAGACAGGAGAGATGATAGGAGG
*
141982 AGAGACA--AGAGA-GAT---AGT
1 AGAGACAGGAGAGATGATAGGAGG
* *
142000 AGAGATAGGAGGGATGATAGGAGG
1 AGAGACAGGAGAGATGATAGGAGG
*
142024 AGAGACAGGAGAGATAATAG
1 AGAGACAGGAGAGATGATAG
142044 AGAGAGGAGG
Statistics
Matches: 47, Mismatches: 9, Indels: 12
0.69 0.13 0.18
Matches are distributed among these distances:
18 8 0.17
20 4 0.09
21 6 0.13
22 4 0.09
24 25 0.53
ACGTcount: A:0.43, C:0.02, G:0.44, T:0.10
Consensus pattern (24 bp):
AGAGACAGGAGAGATGATAGGAGG
Found at i:142051 original size:18 final size:19
Alignment explanation
Indices: 142024--142073 Score: 52
Period size: 18 Copynumber: 2.7 Consensus size: 19
142014 TGATAGGAGG
*
142024 AGAGACAGGAGAGAT-A-A
1 AGAGAGAGGAGAGATGACA
*
142041 TAGAGAGAGGAGGGATGACA
1 -AGAGAGAGGAGAGATGACA
142061 AGAG-GAGGAGAGA
1 AGAGAGAGGAGAGA
142074 AAAAGATGGA
Statistics
Matches: 27, Mismatches: 3, Indels: 4
0.79 0.09 0.12
Matches are distributed among these distances:
18 21 0.78
19 5 0.19
20 1 0.04
ACGTcount: A:0.46, C:0.04, G:0.44, T:0.06
Consensus pattern (19 bp):
AGAGAGAGGAGAGATGACA
Found at i:145696 original size:13 final size:13
Alignment explanation
Indices: 145678--145715 Score: 67
Period size: 13 Copynumber: 2.9 Consensus size: 13
145668 ATAATCCCCC
145678 TGTATCGATACAG
1 TGTATCGATACAG
*
145691 TGTATCGATACAT
1 TGTATCGATACAG
145704 TGTATCGATACA
1 TGTATCGATACA
145716 AAGAAAAATG
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
13 24 1.00
ACGTcount: A:0.32, C:0.16, G:0.18, T:0.34
Consensus pattern (13 bp):
TGTATCGATACAG
Found at i:145729 original size:20 final size:20
Alignment explanation
Indices: 145704--145780 Score: 73
Period size: 20 Copynumber: 3.6 Consensus size: 20
145694 ATCGATACAT
145704 TGTATCGATACAAAGAAAAA
1 TGTATCGATACAAAGAAAAA
* *
145724 TGTATCGATACATAGAATTTCCAGA
1 TGTATCGATACAAAGAA-----AAA
* *
145749 TGTATCGATACACAGAAACA
1 TGTATCGATACAAAGAAAAA
145769 TGTATCGATACA
1 TGTATCGATACA
145781 TTTTGGACAT
Statistics
Matches: 48, Mismatches: 4, Indels: 10
0.77 0.06 0.16
Matches are distributed among these distances:
20 30 0.62
25 18 0.38
ACGTcount: A:0.43, C:0.16, G:0.16, T:0.26
Consensus pattern (20 bp):
TGTATCGATACAAAGAAAAA
Found at i:149659 original size:21 final size:21
Alignment explanation
Indices: 149630--149674 Score: 56
Period size: 21 Copynumber: 2.1 Consensus size: 21
149620 AAGTTTTCAT
*
149630 TTTTCTTAGCTAAC-TCATTA
1 TTTTCTTAGCCAACTTCATTA
*
149650 TTTTCATTAGCCAACTTCTTTA
1 TTTTC-TTAGCCAACTTCATTA
149672 TTT
1 TTT
149675 CAACTTGCAA
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
20 5 0.24
21 8 0.38
22 8 0.38
ACGTcount: A:0.22, C:0.20, G:0.04, T:0.53
Consensus pattern (21 bp):
TTTTCTTAGCCAACTTCATTA
Found at i:151910 original size:13 final size:13
Alignment explanation
Indices: 151892--151917 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
151882 CAATTTTTTG
151892 TGTATCGATACAT
1 TGTATCGATACAT
151905 TGTATCGATACAT
1 TGTATCGATACAT
151918 ACTTGCTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:153386 original size:476 final size:476
Alignment explanation
Indices: 152427--155364 Score: 3939
Period size: 476 Copynumber: 6.2 Consensus size: 476
152417 GATACGCTTT
* * * * * *
152427 CATGCTTTGATTCTTGTAAAAGTCCCCATTCTTTTCAAGATTAGGATCCAAAAACTCATTTTCC-
1 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACTCA-TTCCCT
* * *
152491 TCA-TAGGATACATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTTTTTCCACCATTAATG
65 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTG
* *
152555 ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATACTCATACTAATCCCCATTGTTTT
130 ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTT
* * * *
152620 CAGGATTAGGCACCATTAACGTAGTCTTCTCATAAAGATA-ATGGATATTGATGATTTTGTTTCA
195 CAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAT-GATATTGATGATTTGGTTTCA
* * * * * * * ** * *
152684 CAAGAAACGATTTTTTCGCTCCAATTCTTGTAAATTCTAAGTTTGTGCTTCAAATGAGACAAACA
259 CAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACA
*
152749 TGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAG
324 TGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAG
* *
152814 GATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATAAAAT
389 GATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAAT
* *
152879 CAAAGTTTGTACTTCATATGAGA
454 CAAAGTTTGTACTTTAAATGAGA
* * * *
152902 GATGCATTGATTCTTGTAAAAGTCTCCATT-TGTTTTAAGATTGGGAACCAAAAACCCATTCCCT
1 CATGCATTGATTCTCGTAAAAGTCTCCATTCT-TTTCAAGATTGGGAACCAAAAACTCATTCCCT
* * *
152966 TCATTAGGATACATGACATTGTTGCTTTGGGGTCGCAAGAGAAGCTTGTCTTTCCACCATTATTG
65 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTG
* * *
153031 ATAGAATCAAAGTTTGTCT-TTGAAATAAGACAAACATGAATACCCATACTAATCCCCTTTCTTT
130 ATAAAATCAAAGTTTGTCTCTT-AAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTT
* * * * *
153095 TTAGGATTAGGAACCATAAACATAGTCTTCTCGTAAGGATACATGATATTGATGCTTTGGTTTCG
194 TCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCA
* * ** *
153160 CAACATACGCTTTCTTCCCACTTATTTTTGTAAAGTATAAGTTCATTCCTCAAATTAGACAAACA
259 CAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACA
* ** *
153225 TGGATTCTTGTAAGGATCTTCATTCATTTTGTGATTCGGCACTATAAACACATTCTCCTCATTAG
324 TGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAG
* * **
153290 GATAAATGATATTGATTGTTTTCTTTTACATGGAAATCTTTTCTTTGCCTCGTTTTCCTTAAAAT
389 GATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAAT
*
153355 CAAAGTTTGTACTTTAAATGAAA
454 CAAAGTTTGTACTTTAAATGAGA
* *
153378 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTT
1 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACTCATTCCCTT
* *
153443 CATTAGGATACATGACATT-ATTGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACATTATTG
66 CATTAGGATACATGACATTGA-TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTG
* ** * * * * *
153507 ATAAAATCAAAGTCTACCTCTTAAATAAGGCAAATATAAATACTCATACTAATCCACATTCGTTT
130 ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTT
* * * *
153572 CAAGATTAGGCACCATAAACATAGTCTTCTCCTACGGATACAGGATATTGATGATTTGGTTTCAC
195 CAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCAC
* * * * * * * *
153637 AAGAAACACTTTTTTCCTACCAATTTTTGTAAATTCTAAGTTC-TTGCCTTAAATGAGATAGACA
260 AAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCATT-CCTCAAATGAGACAAACA
* * * *
153701 TGAATTCTAGTAAAGTTCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAG
324 TGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAG
* * *
153766 GATACAA-GATATTGATGGTTTTCTTTTGCGTGAAAATCTTTTCTTTGCCTTATTTTCCTTGAAA
389 GATA-AATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAA
*
153830 TCAAAGTTTGTACATTAAATGAGA
453 TCAAAGTTTGTACTTTAAATGAGA
* * * * * **
153854 -ATGCATTGGTTTTCATAAAAGTCTCCATACTTTTCAAGATTGGGAACCAAAAACACATTCTTTT
1 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACTCATTC-CCT
* * * *
153918 TCATTCGGATACATGACATTGATGCTTTGGGGTCACAAGAGAAGCTTTTCTTTCCACCGTTATTG
65 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTG
*
153983 ATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTT
130 ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTT
* * * * *
154047 CAGGATTACGCACCATAAACATAGTCTTCCCATAAGGATGCATGATATTGATGCTTTGGATTCAC
195 CAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCAC
* * * * *
154112 AAGATACGCTTTCTTCCCACCAATTTGTGTAAAGTATGAGTTCATTGCTTAAATGAGACAAACAT
260 AAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACAT
* *
154177 GGATTCTTGTAGGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGG
325 GGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGG
* *
154242 ATAAATGATATTGATGGTTTTCTTTTGCTTAGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATC
390 ATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATC
*
154307 AAAGCTTGTACTTTAAATGAGA
455 AAAGTTTGTACTTTAAATGAGA
* *
154329 CATGCGTTGATTCTCGTAAAAGTCTCCCTTCTTTTCAAGATTGGGAAGCC-AAAACTCATTCCCT
1 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAA-CCAAAAACTCATTCCCT
* * * * *
154393 TCATTAGGATACAAGACATTGAAGCTTTGGTGTCGTAAGAGAAGCTGTTCTTTCCACCGTTATTG
65 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTG
* * * * * *
154458 ATAGAATCAAAGTTTGTTTATTAAATAAGACAAACATAAATAGTCATACTAA-CCCACATTCTGT
130 ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC-CATTCTTT
* * * * ** * *
154522 TCTGGATTAGGAACCATAAACATGGTCTTCTCATAAGGATACATGGTATTGATTCTTTTGTTTCG
194 TCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCA
* * * * *
154587 TAAGAAACGCTTCCTTCCCGCCAATTTTTGTAAAGTATAAGTTCACTCCTCAACTGAGACAAACA
259 CAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACA
* * * *
154652 TGGATTTTAGTAAAGATCTTTATTCATTTCATGATTAGGCACTATAAACACATTCTCCTTATTAG
324 TGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAG
* *
154717 GATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTCATTTTCCTTAAAAT
389 GATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAAT
*
154782 CAAAGTTTATACTTTAAATGAGA
454 CAAAGTTTGTACTTTAAATGAGA
* * * * * * *
154805 CATGCATTGATTCTCATAAAAGTCCCCATTCTTTCCAAGATTAGGATCCAAAAACTCATTTCCGT
1 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACTCATTCCCTT
* **
154870 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTTTTTCCACGGTT-TATG
66 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTAT-TG
*
154934 ATAAAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAATACTCATA-TAAATCCCCATTCTTT
130 ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACT-AATCCCCATTCTTT
* * * *
154998 TCAAGATTAGGCGCCATAAACATAATCTTCTCATAAGGATA-TTGGATATTGATGATTTGGTTTC
194 TCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAT-GATATTGATGATTTGGTTTC
* * * * * * * *
155062 GCAAGAAACGATTTTTTCCCTCCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAAC
258 ACAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAAC
** * ** *
155127 ATGGATTCTAGTAAGGATCTTCATTCATTTTGTGATTAGGCACTATAAACACAATCTCCTTGTCA
323 ATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTA
* *
155192 CGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAA
388 GGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAA
* *
155257 TCAAAGTTTATACTTTAAATGATA
453 TCAAAGTTTGTACTTTAAATGAGA
* * *
155281 -ATGCATTGATGCTCGT-AAAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACTCATTTCCTT
1 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACTCATTCCCTT
*
155344 CATTAGGAAACATGACATTGA
66 CATTAGGATACATGACATTGA
155365 ATGCATTGAT
Statistics
Matches: 2151, Mismatches: 289, Indels: 47
0.86 0.12 0.02
Matches are distributed among these distances:
474 68 0.03
475 492 0.23
476 1578 0.73
477 13 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (476 bp):
CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACTCATTCCCTT
CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGA
TAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTC
AGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCACA
AGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACATG
GATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGA
TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCA
AAGTTTGTACTTTAAATGAGA
Found at i:154341 original size:951 final size:950
Alignment explanation
Indices: 152427--155364 Score: 4074
Period size: 951 Copynumber: 3.1 Consensus size: 950
152417 GATACGCTTT
* * * * * *
152427 CATGCTTTGATTCTTGTAAAAGTCCCCATTCTTTTCAAGATTAGGATCCAAAAACTCATTTTCC-
1 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACTCA-TTCCCT
* *
152491 TCA-TAGGATACATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTTTTTCCACCATTAATG
65 TCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTCCACCATTATTG
** *
152555 ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACACGAATACTCATACTAATCCCCATT-GTTT
130 ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATAAATACTCATACTAATCCACATTCG-TT
* * *
152619 TCAGGATTAGGCACCATTAACGTAGTCTTCTCATAAAGATA-ATGGATATTGATGATTTTGTTTC
194 TCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGGATATTGATGATTTTGTTTC
*
152683 ACAAGAAACGA-TTTTTTCGCTCCAATTCTTGTAAATTCTAAGTT-TGTG-CTTCAAATGAGACA
259 ACAAGAAAC-ACTTTTTTC-CTCCAATTTTTGTAAATTCTAAGTTCT-TGCCTT-AAATGAGACA
*
152745 AACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCA
320 AACATGGATTCTAGTAAAGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCA
* * * *
152810 TCAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCATA
385 TTAGGATACAAGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTA
* * * * *
152875 AAATCAAAGTTTGTACTTCATATGAGAGATGCATTGATTCTT-GTAAAAGTCTCCATTTGTTTTA
450 AAATCAAAGTTTGTACTT-AAATGAGACATGCATTGATT-TTCATAAAAGTCTCCATCT-TTTCA
* *
152939 AGATTGGGAACCAAAAACCCATTC-CCTTCATTAGGATACATGACATTGTTGCTTTGGGGTCGCA
512 AGATTGGGAACCAAAAACACATTCTCCTTCATTAGGATACATGACATTGATGCTTTGGGGTCGCA
* *
153003 AGAGAAGCTTGTCTTTCCACCATTATTGATAGAATCAAAGTTTGTCT-TTGAAATAAGACAAACA
577 AGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTT-AAATAAGACAAACA
* * * * *
153067 TGAATACCCATACTAATCCCCTTTCTTTTTAGGATTAGGAACCATAAACATAGTCTTCTCGTAAG
641 TGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAG
* **
153132 GATACATGATATTGATGCTTTGGTTTCGCAACATACGCTTTCTTCCCACTTATTTTTGTAAAGTA
706 GAT-CATGATATTGATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCAATTTTTGTAAAGTA
* * *
153197 TAAGTTCATTCCTCAAATTAGACAAACATGGATTCTTGTAAGGATCTTCATTCATTTTGTGATTC
770 TAAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTAAGGATCTTCATTCATTTTGTGATTA
* *
153262 GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATTGTTTTCTTTTACATGGAAAT
835 GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAAT
**
153327 CTTTTCTTTGCCTCGTTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAAA
900 CTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAAA
* *
153378 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTT
1 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACTCATTCCCTT
* * *
153443 CATTAGGATACATGACATT-ATTGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACATTATTG
66 CATTAGGATACATGACATTGA-TGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTCCACCATTATTG
* ** * *
153507 ATAAAATCAAAGTCTACCTCTTAAATAAGGCAAATATAAATACTCATACTAATCCACATTCGTTT
130 ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATAAATACTCATACTAATCCACATTCGTTT
* * * *
153572 CAAGATTAGGCACCATAAACATAGTCTTCTCCTACGGATACA-GGATATTGATGATTTGGTTTCA
195 CAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGGATATTGATGATTTTGTTTCA
* *
153636 CAAGAAACACTTTTTTCCTACCAATTTTTGTAAATTCTAAGTTCTTGCCTTAAATGAGATAGACA
260 CAAGAAACACTTTTTTCCT-CCAATTTTTGTAAATTCTAAGTTCTTGCCTTAAATGAGACAAACA
* * *
153701 TGAATTCTAGTAAAGTTCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAG
324 TGGATTCTAGTAAAGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAG
* *
153766 GATACAAGATATTGATGGTTTTCTTTTGCGTGAAAATCTTTTCTTTGCCTTATTTTCCTTGAAAT
389 GATACAAGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAAT
*
153831 CAAAGTTTGTACATTAAATGAGA-ATGCATTGGTTTTCATAAAAGTCTCCATACTTTTCAAGATT
454 CAAAGTTTGTAC-TTAAATGAGACATGCATTGATTTTCATAAAAGTCTCCAT-CTTTTCAAGATT
** * *
153895 GGGAACCAAAAACACATTCTTTTTCATTCGGATACATGACATTGATGCTTTGGGGTCACAAGAGA
517 GGGAACCAAAAACACATTCTCCTTCATTAGGATACATGACATTGATGCTTTGGGGTCGCAAGAGA
153960 AGCTTTTCTTTCCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATA
582 AGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
* *
154024 CTCATACTAATCCCCATTCTTTTCAGGATTACGCACCATAAACATAGTCTTCCCATAAGGATGCA
647 CTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGAT-CA
* * * *
154089 TGATATTGATGCTTTGGATTCACAAGATACGCTTTCTTCCCACCAATTTGTGTAAAGTATGAGTT
711 TGATATTGATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTT
* * **
154154 CATTGCTTAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCATGATTAGGCACT
776 CATTGCTCAAATGAGACAAACATGGATTCTTGTAAGGATCTTCATTCATTTTGTGATTAGGCACT
* *
154219 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTAGAAATCTTTTC
841 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* *
154284 TTTGCCTTATTTTCCTTAAAATCAAAGCTTGTACTTTAAATGAGA
906 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAAA
* *
154329 CATGCGTTGATTCTCGTAAAAGTCTCCCTTCTTTTCAAGATTGGGAAGCC-AAAACTCATTCCCT
1 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAA-CCAAAAACTCATTCCCT
* * * *
154393 TCATTAGGATACAAGACATTGAAGCTTTGGTGTCGTAAGAGAAGCTGTTCTTTCCACCGTTATTG
65 TCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTCCACCATTATTG
* * * * *
154458 ATAGAATCAAAGTTTGTTTATTAAATAAGACAAACATAAATAGTCATACTAACCCACATTC-TGT
130 ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATAAATACTCATACTAATCCACATTCGT-T
* * * **
154522 TCTGGATTAGGAACCATAAACATGGTCTTCTCATAAGGATACATGG-TATTGATTCTTTTGTTTC
194 TCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGGATATTGATGATTTTGTTTC
** * * * * * * * * *
154586 GTAAGAAACGCTTCCTTCCCGCCAATTTTTGTAAAGTATAAGTTCACT-CCTCAACTGAGACAAA
259 ACAAGAAACACTT-TTTTCCTCCAATTTTTGTAAATTCTAAGTTC-TTGCCTTAAATGAGACAAA
* * *
154650 CATGGATTTTAGTAAAGATCTTTATTCATTTCATGATTAGGCACTATAAACACATTCTCCTTATT
322 CATGGATTCTAGTAAAGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATT
*
154715 AGGATA-AATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTCATTTTCCTTAA
387 AGGATACAA-GATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * * *
154779 AATCAAAGTTTATACTTTAAATGAGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTCCAAG
451 AATCAAAGTTTGTAC-TTAAATGAGACATGCATTGATTTTCATAAAAGTCTCCA-TCTTTTCAAG
* * * * *
154844 ATTAGGATCCAAAAACTCATT-TCCGTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
514 ATTGGGAACCAAAAACACATTCTCCTTCATTAGGATACATGACATTGATGCTTTGGGGTCGCAAG
* * * *
154908 AGAAGCTTTTTTTTCCACGGTT-TATGATAAAATCAAAGTTTGTCTCTTAAATAAGAAAAACATG
579 AGAAGCTTTTCTTTCCACCGTTAT-TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* * *
154972 AATACTCATA-TAAATCCCCATTCTTTTCAAGATTAGGCGCCATAAACATAATCTTCTCATAAGG
643 AATACTCATACT-AATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGG
* * * * * * *
155036 AT-ATTGGATATTGATGATTTGGTTTCGCAAGAAACGATTTTTTCCCTCCAATTTTTGTAAATTC
707 ATCA-T-GATATTGATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCAATTTTTGTAAAGTA
* *
155100 TAAGTTC-GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTTGTGATT
770 TAAGTTCATTG-CTCAAATGAGACAAACATGGATTCTTGTAAGGATCTTCATTCATTTTGTGATT
* ** * * *
155164 AGGCACTATAAACACAATCTCCTTGTCACGATACATGATATTGATGGTTTTCTTTTGCATGGAAA
834 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAA
* *
155229 TCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAATGATA
899 TCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAAA
* * *
155281 -ATGCATTGATGCTCGT-AAAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACTCATTTCCTT
1 CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACTCATTCCCTT
*
155344 CATTAGGAAACATGACATTGA
66 CATTAGGATACATGACATTGA
155365 ATGCATTGAT
Statistics
Matches: 1762, Mismatches: 195, Indels: 61
0.87 0.10 0.03
Matches are distributed among these distances:
949 2 0.00
950 71 0.04
951 899 0.51
952 781 0.44
953 9 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (950 bp):
CATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACTCATTCCCTT
CATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTCCACCATTATTGA
TAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATAAATACTCATACTAATCCACATTCGTTTC
AGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGGATATTGATGATTTTGTTTCAC
AAGAAACACTTTTTTCCTCCAATTTTTGTAAATTCTAAGTTCTTGCCTTAAATGAGACAAACATG
GATTCTAGTAAAGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGA
TACAAGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCA
AAGTTTGTACTTAAATGAGACATGCATTGATTTTCATAAAAGTCTCCATCTTTTCAAGATTGGGA
ACCAAAAACACATTCTCCTTCATTAGGATACATGACATTGATGCTTTGGGGTCGCAAGAGAAGCT
TTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCA
TACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATCATGATA
TTGATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCATTG
CTCAAATGAGACAAACATGGATTCTTGTAAGGATCTTCATTCATTTTGTGATTAGGCACTATAAA
CACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGC
CTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAAA
Found at i:155424 original size:85 final size:84
Alignment explanation
Indices: 155280--155465 Score: 252
Period size: 85 Copynumber: 2.2 Consensus size: 84
155270 TTTAAATGAT
*
155280 AATGCATTGATGCTCGTAAAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACTCATTTCCTTC
1 AATGCATTGATGCTCGTAAAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACCCATTTCCTTC
155345 ATTAGGAAACATGACATTG
66 ATTAGGAAACATGACATTG
* * * * *
155364 AATGCATTGATTCTTGTAAAATTCTCCATTCTATTT-AAGATTGGGAACCAAAAACCCATTTCTT
1 AATGCATTGATGCTCGT-AAAGTCTCCACTCT-TTTCAAGATTGGGAACCAAAAACCCATTTCCT
*
155428 TCATTAGGATACATGACATTG
64 TCATTAGGAAACATGACATTG
* *
155449 -ATGCTTTGGTG-TCGTAA
1 AATGCATTGATGCTCGTAA
155466 GAGAAGCTTG
Statistics
Matches: 89, Mismatches: 11, Indels: 6
0.84 0.10 0.06
Matches are distributed among these distances:
82 2 0.02
83 3 0.03
84 23 0.26
85 58 0.65
86 3 0.03
ACGTcount: A:0.31, C:0.19, G:0.16, T:0.34
Consensus pattern (84 bp):
AATGCATTGATGCTCGTAAAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACCCATTTCCTTC
ATTAGGAAACATGACATTG
Found at i:155911 original size:159 final size:155
Alignment explanation
Indices: 155719--166552 Score: 2318
Period size: 159 Copynumber: 68.1 Consensus size: 155
155709 TTCATTTTGT
* * ** **
155719 GATTCGGCACTATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTTCTTTTACAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * **
155783 GGAAATCTTTTCTTTGCCTCGTTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAAACATGCATT
64 AGAAATCTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
155848 GATTCTCGTAAAAGTCTCCATTCTTTCCAA
127 GATTCTCGTAAAAGTCTCCATTCTTT-CAA
* * * * * * * *
155878 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTAATGCTTTGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
** * ** * * *
155943 AGAGGCTTTTCTTTCCAACATTATTGATAAAATCAAAG--TCTACCTCTTAAAT-AAGGCAAATA
66 A-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTA-CT-TTAAATGAA-ACAAACA
** * * **
156005 TAAATACTCATACTAGTC-CACATTCGTTTCAA
125 TTGATTCTCGTAAAAGTCTC-CATTC-TTTCAA
* * * * * * *
156037 GATTAGGCACCATAAACATAGT-CTTCTCA-TACGGATACAGGATATTGATGATTTGGTTTCACA
1 GATTAGGCACCATAAACACATTCCCT-TCATTA-GGATAAATGATATTGATGGTTTGGTTTCGCA
* * * * * * * *
156100 AGAAA-CACTTT-TTTCCTACCAATTTT-TGTAAATTCTAAGTTCGTGCCTTAAAAGACACAAAC
64 AGAAATC-TTTTCTTTCCT--C-ATTTTCT-TAAAATCAAAGTTTGTACTTTAAATGAAACAAAC
* * * * * *
156162 GTGGATTCTAGT-AAGGATCTGCATTCATTTCAT
124 ATTGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * ** *
156195 GATTAGGCACTATAAACACATTCTCC-TCAATAGGATAAATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * * **
156259 GGAAAT-TTTTTTGTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGATAGATGCAT
64 AGAAATCTTTTCT-TT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACAT
*
156323 TGATTCTCGTAAAAGTCTCCACTCTTTTCAA
126 TGATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * *
156354 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
* * * * **
156419 AGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCAC-TTAAAT-AAGACAAACA-
66 A-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGT-ACTTTAAATGAA-ACAAACAT
* * ** * * *
156481 TGAATACTCATACTAGTCCCCATTCCTTTTAG
126 TG-ATTCTCGTAAAAGTCTCCATT-CTTTCAA
* * * * *
156513 GATTAGGCACCATAAACATAGT-CCTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * ** * * ** * ** *
156577 GAAATGCTTTT-TTCCCACCAATTTT-TGTAAATTCTGAGTTCGTGCCATAAAAGCCACAAACGT
65 GAAAT-CTTTTCTTTCC-TC-ATTTTCT-TAAAATCAAAGTTTGTACTTTAAATGAAACAAACAT
* * * * **
156640 GGATTCTAGT-AAGGATCTGCATTCATTTCGT
126 TGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * * ** *
156671 GATTAGGCACTATAAACACATTCTCC-TCAATAGGATAAATGATATTTATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * *
156735 GGAAATTTTTTCTTTTTTTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACA
64 AGAAA-----TC-TTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACA
** * *
156800 TGCATTGATTCTCATAAAAGTCTCCATTGTTTCCAA
121 AACATTGATTCTCGTAAAAGTCTCCATTCTTT-CAA
* * * * * * *
156836 GATT-GGGATCCAAAAACACATTCCCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCGCAA
1 GATTAGGCA-CCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
** * * ** * *
156900 GAGAGGCTTTTCTTTCCAACGTTATTGATAAAATTAAAATTTGT-CTCTTAAAT-AATACAAAC-
65 GA-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACA
* * ** *
156962 TTGAATACTCATACTTA-TC-CCATTCTTTTCAG
125 TTG-ATTCTCGTA-AAAGTCTCCATTC-TTTCAA
* * * * * * * * *
156994 GATTAGGAACCATAAACATAGT--CTTCTTATATGGATACA-GACATTGAAGCTTTGGTGTCGCA
1 GATTAGGCACCATAAACACATTCCCTTCAT-TA-GGATAAATGATATTGATGGTTTGGTTTCGCA
* * * ** * *
157056 AGAGAAGT-TGTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGT-TTATTAAAT-AAGACAAA
64 AGA-AA-TCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAA
** ** * * * **
157118 CATAAATAGTCATACTAA--CCCACATTCTGTTCTG
123 CATTGATTCTCGTA-AAAGTCTC-CATTCT-TTCAA
* *** * * * * ** * *
157152 GATTAGGAACCATAAACATGGT-CTTCTCATAAGGATACATGGTATTGATTCTTTTGTTTCGTAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * * * * * *
157216 GAAA-CGCTTCCTTCCCGCCAATTTT-TGTAAAGT-ATAAG-TT-CACTCCTCAACTGAGACAAA
65 GAAATC-TTTTCTTTCC-TC-ATTTTCT-TAAAATCA-AAGTTTGTACT--TTAAATGAAACAAA
* * * ** *
157276 CATGGATTTTAGT-AAAGATCTTTATTCATTTCAT
123 CATTGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * ** * *
157310 GATTAGGCACTATAAACACATTCTCC-TCATTAGGATAAATCATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * **
157374 GAAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAGACATGCATT
65 G-AAATCTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
*
157439 GATTCTCGTAAAAGTCCCCATTCTTTCCAA
127 GATTCTCGTAAAAGTCTCCATTCTTT-CAA
* * * * * *
157469 GATTAGG-ATCCAAAAACTCA-TCTCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
1 GATTAGGCA-CCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA
* * * * ** *
157532 AGTGAAGCTTTTTTTTCCACAGTTTATGATAAAATCAAAGTTTGT-CTCATAAAT-AAGACAAAC
64 AG-AAATCTTTTCTTTCCTCA-TTT-TCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAAC
* * * *
157595 A-TGAATACTCATACAAA-TCCCCTTTCTTTTCAA
124 ATTG-ATTCTCGTA-AAAGTCTCCATTC-TTTCAA
* * * * * * *
157628 GATTAGGCGCCATAAACATAGT-CTTCTCATAAGGAT-ATTGGATATTGATGATTTGGTTTCGCA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAAT-GATATTGATGGTTTGGTTTCGCA
* * * * * * * *
157691 AGAAA-CGATTTT-TTCCCTCCAATATTTGC--AAATTCTAAGTTCGTGCCTCAAATGAGACAAA
64 AGAAATC--TTTTCTTTCCT-C-AT-TTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAA
* * * * **
157752 CATGGATTCTAGT-AAGGATCTTCATTCATTTCGT
123 CATTGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * * * ** *
157786 GATTAGGCACTATAAACACAATCTCC-TCAATAAGATAAATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * **
157850 GGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAATGATA-ATGCATT
64 AGAAATCTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
* *
157914 GATGCTCGTAAAAGTCTCCACTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * * * * * *
157944 GATTGGGAACCAAAAACTCATTTCCTTCATTAGGATACATGACATTGAAGCTTCGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
* ** * * ** * * *
158009 AGAAGCAGTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGT-TTCTTACAT-AAGACAAACA-
66 A-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACAT
** * * ** * **
158071 TGAATAGTCATACTAA-TCTATAGTCTTTTCTG
126 TG-ATTCTCGTA-AAAGTCTCCATTC-TTTCAA
* * * *
158103 GATTAGGCACCATAAACATGGTC-TTCTCATACAGATACAGGATAAATGATATTGATGCTTTGGT
1 GATTAGGCACCATAAACA----CATTC-CCTTC--AT-TAGGATAAATGATATTGATGGTTTGGT
* * * * * ** * * * * *
158167 TTGGCAAGAAA-CGCTTTCTTCCCCCTAATTTT-TGTAAAGT-ATAAGTTCATTCCTCAAATTAG
58 TTCGCAAGAAATC-TTTTCTT--TCCTCATTTTCT-TAAAATCA-AAGTTTGTACTTTAAATGAA
* * *
158229 ACAAACATGGATTC-C--AATAAGGATCTTCATTCATTTTC-T
118 ACAAACATTGATTCTCGTAA-AA-G-TCTCCATTC--TTTCAA
* ** * *
158268 GATTAGGCACTATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* **
158332 GAAAATCCTTTT-TTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
65 G-AAAT-CTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACAT
* * * *
158396 TGTTTCTCATAAAACTCTCCATTGTTTCCAA
126 TGATTCTCGTAAAAGTCTCCATTCTTT-CAA
* * * * *
158427 GATT-GGGATCCA-ACAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
1 GATTAGGCA-CCATA-AACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA
* * * * **
158490 AGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAAT-AAGACAAAC
64 AGA-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAAC
** * ** * * *
158553 A-TGAATAGTCATACTAGTCCCCATTCCTTTTAG
124 ATTG-ATTCTCGTAAAAGTCTCCATT-CTTTCAA
* * * * * * *
158586 GATTAGGCACTATAAACATAGT-CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * * * * * * *
158650 GAAATGCTTTT-TTCCCACCAATTTT-TGTAAATTCTAAGTTCGTGCCTTAAAAGACACAAACGT
65 GAAAT-CTTTTCTTTCC-TC-ATTTTCT-TAAAATCAAAGTTTGTACTTTAAATGAAACAAACAT
* * * * **
158713 GGATTCTAGT-AAGGATCTGCATTCATTTCGT
126 TGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * ** * *
158744 GATTAGGCACTATAAACACATTCTCC-TCAATAGGATAAATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * **
158808 GCAAATTTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGACACATGCATT
65 G-AAATCTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
*
158873 GATTCTCGTAAAAGTCTCCACTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * * *
158903 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTATGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
* * * * **
158968 AGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCAC-TTAAAT-AAGACAAACA-
66 A-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGT-ACTTTAAATGAA-ACAAACAT
* * ** * * *
159030 TGAATACTCATACTAGTCCCCATTCCTTTTAG
126 TG-ATTCTCGTAAAAGTCTCCATT-CTTTCAA
* * * * * * *
159062 GATTAGGCACCATAAACATAGT-CTTCTCATAAGGAGAAAGGATATTGATGATTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * ** * * ** * ** *
159126 GAAATGCTTTT-TTCCCACCAATTTT-TGTAAATTCTGAGTTCGTGCCATAAAAGCCACAAACGT
65 GAAAT-CTTTTCTTTCC-TC-ATTTTCT-TAAAATCAAAGTTTGTACTTTAAATGAAACAAACAT
* * * * *
159189 GGATTCTAGT-AAGGATCTGCATTCATTTCAT
126 TGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * * ** *
159220 GATTAGGCACTATAAACACATTCTCC-TCAATAGGATAAATGATATTTATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * * *
159284 GGAAATTTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGACACAAGCATT
64 AGAAATCTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
** *
159349 GATTCTCGTATTAGTCTCCACTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * * * *
159379 GATTGGGAACCAAAAACACATTCCTTTCATTAGTATACATGACATTGATGCTTTGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
** * * ** * *
159444 AGAGGCTTTTCTTTCCAACGTTATTGATAAAATTAAAATTTGT-CTCTTAAAT-AATACAAAC-T
66 A-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACAT
* * ** *
159506 TGAATACTCATACTTA-TC-CCATTCTTTTCAG
126 TG-ATTCTCGTA-AAAGTCTCCATTC-TTTCAA
* * * * * * *
159537 GATTAGGAACCATAAACATAGT--CTTCTTATATGGATACAGGAT-TTGATGATTTGGTTTCGCA
1 GATTAGGCACCATAAACACATTCCCTTCAT-TA-GGATAAATGATATTGATGGTTTGGTTTCGCA
* * * * ** * * ** *
159599 AGAAATGCTTTT-TTCCCATAACTTTT-GTAAATTCTAAA-TTCATGCCTCCAATGAGACAAACA
64 AGAAAT-CTTTTCTTTCC-TCA-TTTTCTTAAAATC-AAAGTTTGTACTTTAAATGAAACAAACA
* * * * * **
159661 TGGATTCTAGT-AAGGATCTTCATACGTATT-GT
125 TTGATTCTCGTAAAAG-TCTCCATTC-T-TTCAA
* * * ** *
159693 GATTAGGCACTATAAACATATTCTCCTT-ATTAGGATAAATGAAATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * * * *
159757 GGAAATCTTTTCTTCGCCTTATTCTCCATAAAATCAAAGTTTGTACTTTATATG----AGAC---
64 AGAAATCTTTTCTT-TCCTCATT-TTCTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
* *
159815 -ATTCTTGTAAAAGTCTCCATTCGTTTTAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * * * *
159844 GATTGGGAACCAAAAACACATTCCATTCATTAGGATACATGACATTGAAGCTTTGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
* * * * * ** *
159909 AGAAGCATGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGT-CTCTTAAAT-AAGACAAACA-
66 A-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACAT
* * * * * *
159971 TGAATACTCATACTAA-TCCCCTTTCTTTTCAG
126 TG-ATTCTCGTA-AAAGTCTCCATTC-TTTCAA
* * * * * * * *
160003 GATTAGGCACCATAAACATAGT-CTTCTCATAAGGATACATGGTATTGATGCTTTGGTTTTGCAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * * *** *
160067 GATA-CGCTTTCTTCCCACCTATTTT-TGCAAGATATGCTTTGGTTTTGCAAGTTCATTCCTCAA
65 GAAATC-TTTTCTTTCC-TC-ATTTTCT-TAA-A-AT-C-AAAG-TTT----GTAC-TT--T-AA
* * * * * * * * ***
160130 ATTAGACAAACATGGATTCTAGT-GAGGATCTTCACTCATTTTGT
113 ATGAAACAAACATTGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * * * ** *
160174 GATTAGGCACTATAAACACATTCTCCTT-ATTAGGATAAATAACATTGATGATTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * **
160238 GGAAATCTTTTCTTTGCCTCGTTTTTCTTAAAATCAAAGTTTGTACTTTAACTGAGACATGCATT
64 AGAAATCTTTTCTTT-CCTC-ATTTTCTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
160303 GATTCTCGTAAAAGTCTCCATTCTTTCTAA
127 GATTCTCGTAAAAGTCTCCATTCTTTC-AA
* * * * ** ** * * * *
160333 TATT-GGGAACA-AGAACACATTCCTTTTGTTAGGATGCATGACATTGATGCTTCGGTGTCGCAA
1 GATTAGGCACCATA-AACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * ** * *
160396 GAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCACAA-TTTGT-CTCTTAAATAAAACAAATA
65 GA-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCA-AAGTTTGTACT-TTAAATGAAACAAACA
* * * * *
160459 -TGAATACTCATACTAA-TC-CC-CTCTTTTCAG
125 TTG-ATTCTCGTA-AAAGTCTCCATTC-TTTCAA
* * * * * * ***
160489 GATTAGGCACCATAAACATAGT-CTTCTCATAAGGATACAGGATATTGACAATTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * * * * * *
160553 GAAACGCTTTT-TTCCCTCCAGTTTT-TGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACAT
65 GAAA-TCTTTTCTTTCCT-CA-TTTTCT-TAAAATCAAAGTTTGTACTTTAAATGAAACAAACAT
* * * * ** **
160616 GGACTCTAGT-AAGGATCTGTATTCATTTCGT
126 TGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * * ** *
160647 GATTAGGCACTATAAACAAATTCTCCTT-AATAGGATAAATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * **
160711 GGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGACATGCATT
64 AGAAATCTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
160776 GATTCTCGTAAAAGTCTCCATTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * * * *
160806 GATT-GGGAACAAAAACACATTCCCTGCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
** * * * * *
160870 AGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGT-CTCTTAAAT-AAGACAAACA-
66 A-AATCTTTTCTTTCC-TCATTTTC-TTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACAT
* ** * **
160932 TGAATACTCACACTAA-TC-CACATTCTTTTCTG
126 TG-ATTCTCGTA-AAAGTCTC-CATTC-TTTCAA
* * *
160964 GATTAGGCACCATAAACATCA-T-CTTCTCATAAGGATAAATGATATTGATGCTTTGGTTTCGCA
1 GATTAGGCACCATAAACA-CATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA
* * * * ** * *** * *
161027 AGAAA-CGCTTTCTTCCCACCAATTTT-TGTAAAGT-ATAAGTTCATTCCACAAATTAGACAAAC
64 AGAAATC-TTTTCTTTCC-TC-ATTTTCT-TAAAATCA-AAGTTTGTACTTTAAATGAAACAAAC
* * * * * **
161089 ATGGATTCTAG-CAAGGATCTTCATTCATTTCGT
124 ATTGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * * * ** *
161122 GATT-GGATACTATAAACACATTCTCC-TCATTAGGATAAATGTTATTGACGGTTTTCTTTTGCA
1 GATTAGG-CACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA
* * * * **
161185 TGAAAATCTTTTCCTTGCATTATTTTCCTTAAAATCAAAGTTTGTACTTTAAAT-AAGA-ATGCA
64 AG-AAATCTTTT-CTTTCCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAA-ACAAACA
* *
161248 TTGATTCTCGTAAAAGTCTCCCTTTTTTTCAA
125 TTGATTCTCGTAAAAGTCT-CCATTCTTTCAA
* * * * * * * * *
161280 GATTGGGAACCCA-AAACTCATTCCCTTCATTAGGATACATGACATTGAAGCTTTGGTGTCACAA
1 GATTAGGCA-CCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * ** * * *
161344 GAGAAGCTGTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGT-TTATTAAGT-AAGACAAACA
65 GA-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACA
** ** * * * **
161407 TAAATAGTCATACTAA--CCCACATTCTGTTCTG
125 TTGATTCTCGTA-AAAGTCTC-CATTCT-TTCAA
* *** * * * * ** * *
161439 GATTAGGAACCATAAACATGGT-CTTCTCATAAGGATACATGGTATTGATTCTTTTGTTTCGTAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * * * * * *
161503 GAAA-CGCTTCCTTCCCGCCAATTTT-TGTAAAGT-ATAAG-TT-CACTCCTCAACTGAGACAAA
65 GAAATC-TTTTCTTTCC-TC-ATTTTCT-TAAAATCA-AAGTTTGTACT--TTAAATGAAACAAA
* * ** *
161563 CATGGATT-TAGT-AAAGATCTTTATTCATTTCAT
123 CATTGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
** * ** * *
161596 GATTAGGCACTGTAAACACATTCTCC-TCATTAGGATAAATCATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * **
161660 GAAAATCTTTTCTTTGCCTCATTTTCCTTAAAATGAAAGTTTATACTTTAAATGAGACATGCATT
65 G-AAATCTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
*
161725 GATTCTCGTAAAAGTCCCCATTCTTTCCAA
127 GATTCTCGTAAAAGTCTCCATTCTTT-CAA
* * * * * *
161755 GATTAGG-ATCCAAAAACTCA-TCTCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
1 GATTAGGCA-CCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA
* * * * **
161818 AGTGAAGCTTTTTTTTCCACAGTTTATGATAAAATCAAAGTTTGT-CTCTTAAAT-AAGACAAAC
64 AG-AAATCTTTTCTTTCCTCA-TTT-TCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAAC
* ** *
161881 A-TGAATACTTATACAAA-TCCCCATTCTTTTCAA
124 ATTG-ATTCTCGTA-AAAGTCTCCATTC-TTTCAA
* * * * * * * *
161914 GATTAGGCGCCGTAAACATAGT-CTTCTCATAAGGAT-ATTGGATATTGATGATTTGGTTTCGCA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAAT-GATATTGATGGTTTGGTTTCGCA
* * * * * * * * *
161977 AGAAA-CGATTTT-TTCCCTCTAATTTT-TGCAAATTCTAAGTTCGTGCCTCAAATGAGACAAAC
64 AGAAATC--TTTTCTTTCCTC--ATTTTCT-TAAAATCAAAGTTTGTACTTTAAATGAAACAAAC
* * * * **
162039 ATGGATTCTAGT-AAGGATCTTCATTCATTTCGT
124 ATTGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * * * * * ** *
162072 GATTAGGCACTATAAACACAATCTCCTT-GTCACGATACATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * ** *
162136 GGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAATGATA-ATGCACT
64 AGAAATCTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
* *
162200 GATGCTCGTAAAAGTCTCCACTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * * * * * *
162230 GATTGGGAACCAAAAACTCATTTCCTTCATTAGGATACATGACATTGAAGCTTCGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
* * * * ** * *
162295 AGAAGCTGTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGT-TTCTTAAAT-AAGACAAACA-
66 A-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACAT
* * * * * * **
162357 AGA--ATAGTCAAACTAATCCACCTTCTTTTCTG
126 TGATTCTCGTAAAAGT-CTCCA--TTC-TTTCAA
* * * * * * * *
162389 GATTAGGCACCGTAGACATAGT-CTTCTCATAAGGATAAATGATATTGATGCTTTGGTTTGGCAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * ** * * * * *
162453 GAAA-CGCTTTCTTCCCCCTAATTTT-TGTAAAGT-ATAAGTTCATTCCTCAAATTAGACAAACA
65 GAAATC-TTTTCTT--TCCTCATTTTCT-TAAAATCA-AAGTTTGTACTTTAAATGAAACAAACA
* * * *
162515 TGGATTC-C-AAAAAGGATCTTCATTCATTTTC-T
125 TTGATTCTCGTAAAA-G-TCTCCATTC--TTTCAA
* ** *
162547 GATTAGGCACTATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTTCTTTTG-AT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * *
162610 TGAAAATCTTTTTTTCTTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAT
64 AG-AAATC---TTTTC-TTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAA
* * *
162675 GCATTGATTCTCATAAAAGTCTCCATTGTTTCCAA
122 ACATTGATTCTCGTAAAAGTCTCCATTCTTT-CAA
* * * * * * * *
162710 GATT-GGGATCCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTAGTGTCACAA
1 GATTAGGCA-CCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * **
162774 GAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAAT-AAGAC-AACA
65 GA-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACA
* * ** * * *
162836 -TGAATACTCATACTAGTCCCCATTCCTTTTAG
125 TTG-ATTCTCGTAAAAGTCTCCATT-CTTTCAA
* * * * * *
162868 GATTAGGCACCATAAACATAGT-CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * * * * * * *
162932 GAAATGCTTTT-TTCCCACCAATTTT-TGTAAATTCTAAGTTCGTGCCTTAAAAGACACAAACGT
65 GAAAT-CTTTTCTTTCC-TC-ATTTTCT-TAAAATCAAAGTTTGTACTTTAAATGAAACAAACAT
* * * * *
162995 GGATTCTAGT-AAGGATCTGCATTCATTTCAT
126 TGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * ** *
163026 GATTAGGCACTATAAACACATTCTCC-TCAATAGGATAAATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * * * **
163090 GGAAATTTTTTCGTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGATAGATGCATT
64 AGAAATCTTTTC-TTTCCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
*
163155 GATTCTCGTAAAAGTCTCCACTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * * *
163185 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTAGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
* * * * **
163250 AGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCAC-TTAAAT-AAGACAAACA-
66 A-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGT-ACTTTAAATGAA-ACAAACAT
* * ** * * *
163312 TGAATACTCATACTAGTCCCCATTCCTTTTAG
126 TG-ATTCTCGTAAAAGTCTCCATT-CTTTCAA
* * * * *
163344 GATTAGGCACCATAAACATAGT-CCTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * ** * * ** * ** *
163408 GAAATGCTTTT-TTCCCACCAATTTT-TGTAAATTCTGAGTTCGTGCCATAAAAGCCACAAACGT
65 GAAAT-CTTTTCTTTCC-TC-ATTTTCT-TAAAATCAAAGTTTGTACTTTAAATGAAACAAACAT
* * * * **
163471 GGATTCTAGT-AATGATCTGCATTCATTTCGT
126 TGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * * ** *
163502 GATTAGGCACTATAAACACATTCTCC-TCAATAGGATAAATGATATTTATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * *
163566 GGAAATTTTTTCTTTTTTTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACA
64 AGAAA-----TC-TTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACA
** * *
163631 TGCATTGATTCTCATAAAAGTCTCCATTGTTTCCAA
121 AACATTGATTCTCGTAAAAGTCTCCATTCTTT-CAA
* * * * * * *
163667 GATT-GGGATCCAAAAACACATTCCCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCGCAA
1 GATTAGGCA-CCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
** * * * **
163731 GAGAGGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAAT-AAGACAAACA
65 GA-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACA
** * ** * * *
163794 -TGAATAGTCATACTAGTCCCCATTCCTTTTAG
125 TTG-ATTCTCGTAAAAGTCTCCATT-CTTTCAA
* ** * * * *
163826 GATTAGGCACCATAAACATAGTTTTC-TCATAAGGACAAAGGATATTGATGATTTGGTTTCGCAA
1 GATTAGGCACCATAAACACA-TTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * ** * * ** * ** *
163890 GAAATGCTTTT-TTCCCACCAATTTT-TGTAAATTCTGAGTTCGTGCCATAAAAGCCACAAACGT
65 GAAAT-CTTTTCTTTCC-TC-ATTTTCT-TAAAATCAAAGTTTGTACTTTAAATGAAACAAACAT
* * * * **
163953 GGATTCTAGT-AAGGATCTGCATTCATTTCGT
126 TGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * * ** *
163984 GATTAGGCACTATAAACACATTCTCC-TCAATAGGATAAATGATATTTATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * * *
164048 GGAAATTTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGACACAAGCATT
64 AGAAATCTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
** *
164113 GATTCTCGTATTAGTCTCCACTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * * * *
164143 GATTGGGAACCAAAAACACATTCCTTTCATTAGTATACATGACATTGATGCTTTGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
** * * ** * *
164208 AGAGGCTTTTCTTTCCAACGTTATTGATAAAATTAAAATTTGT-CTCTTAAAT-AATACAAAC-T
66 A-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACAT
* * *** *
164270 TGAATACTCATACTTGTC-CCATTCTTTTCAG
126 TG-ATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * *
164301 GATTAGGAACCATAAACATAGT--CTTCTTATATGGATACAGGAT-TTGATGATTTGGTTTCGCA
1 GATTAGGCACCATAAACACATTCCCTTCAT-TA-GGATAAATGATATTGATGGTTTGGTTTCGCA
* * * * ** * * ** *
164363 AGAAATGCTTTT-TTCCCATAACTTTT-GTAAATTCTAAA-TTCATGCCTCCAATGAGACAAACA
64 AGAAAT-CTTTTCTTTCC-TCA-TTTTCTTAAAATC-AAAGTTTGTACTTTAAATGAAACAAACA
* * * * * **
164425 TGGATTCTAGT-AAGGATCTTCATACGTATT-GT
125 TTGATTCTCGTAAAAG-TCTCCATTC-T-TTCAA
* * * ** *
164457 GATTAGGCACTATAAACATATTCTCCTT-ATTAGGATAAATGAAATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * * * *
164521 GGAAATCTTTTCTTCGCCTTATTCTCCATAAAATCAAAGTTTGTACTTTATATG----AGAC---
64 AGAAATCTTTTCTT-TCCTCATT-TTCTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
* *
164579 -ATTCTTGTAAAAGTCTCCATTCGTTTTAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * *** * *
164608 GATTGGGAACCAAAAACACATTCCATTCATTAGGATTAGGCACT-ATAAACATAGTCTT-CTTAT
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGA-TA---AATGATATTGATGGT-TTGGTT-T
* * * *** * *** **
164671 ACGGATATAGGATATTGACGATTTGGTTTTTCGAGAAATGCTTTTTTCCCA-CAATTTTTGTAAA
60 -C-G-CA-A-GA-AAT--C--TTT--TCTTTC--CTCAT--TTTCTTAAAATCAAAGTTTGT--A
* * * * * * **
164735 TTTTAAGTTCGTGCCTCGAATGAGACAAAGATAGATTCTAGT-AAAGATCTTCATTCATTTCGT
107 CTTT-A------------AATGAAACAAACATTGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * * * ** *
164798 GATTAGGCACTATAAACACATTCTCC-TCATTCGGATAAATGACATTGATGATTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * **
164862 GGAAATCTTTTCTTTGCCTCGTTTTTCTTAAAATCAAAGTTTGTACTTTAAATGACACATGCATT
64 AGAAATCTTTTCTTT-CCTC-ATTTTCTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
*
164927 GATTCTCGTAAAAGTCTCCACTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * *
164957 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
* * * * ** *
165022 AGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCAC-TTAAAT-AAGACAAAC-G
66 A-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGT-ACTTTAAATGAA-ACAAACAT
* * ** * * *
165084 TGAATACTCATACTAGTCCCCATTCCTTTTAG
126 TG-ATTCTCGTAAAAGTCTCCATT-CTTTCAA
* * * * * * * *
165116 GATTAGGCACCATAAACATAGT-CTTCTCATAAGGATAAAGGATTTTGATGATTTAGTTTCGCAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * * * * * ** *
165180 GAAATGCTTTT-TTCCCACCAATTTT-TGTAAATTCTAAGTTCGTGCCTTAAAAGCCACAAACGT
65 GAAAT-CTTTTCTTTCC-TC-ATTTTCT-TAAAATCAAAGTTTGTACTTTAAATGAAACAAACAT
* * * * *
165243 GGATTCTAGT-AAGGATCTGCATTCATTTCAT
126 TGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * ** * *
165274 GATTAGGCACTATAAACACATTCTCC-TCAATAGGATAAATGATATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * **
165338 GCAAATTTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGACACATGCATT
65 G-AAATCTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
* *
165403 AATTCTCGTAAAAGTCTCCACTCTTTTCAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * * *
165433 GATTGGGAACCAAAAACACATTCCCTTCATTAGTATACATGACATTGATGCTTTGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
** * * * * *
165498 AGAGGCTTTTCTTTCCAACATTATCGATAAAATTAAAATTTGT-CTCTTAAAT-AATACAAAC--
66 A-AATCTTTTCTTTCC-TCATTTTC-TTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACAT
* * *
165559 T-A--CTCATACTAA-TC-CCATTCTTTTCAG
126 TGATTCTCGTA-AAAGTCTCCATTC-TTTCAA
* * * * * *
165586 GATTAGGCACCATAAACATAGT--CTTCTTATATGGATACAGGAT-TTGATGATTTGGTTTCGCA
1 GATTAGGCACCATAAACACATTCCCTTCAT-TA-GGATAAATGATATTGATGGTTTGGTTTCGCA
* * * * * ** * * ** *
165648 GGAAATGCTTTT-TTCCCATAACTTTT-GTAAATTCTAAA-TTCATGCCTCCAATGAGACAAACA
64 AGAAAT-CTTTTCTTTCC-TCA-TTTTCTTAAAATC-AAAGTTTGTACTTTAAATGAAACAAACA
* ** * * * **
165710 TGGATTCAGGT-AAGGATCTTCATACGTATT-GT
125 TTGATTCTCGTAAAAG-TCTCCATTC-T-TTCAA
* * * * ** *
165742 GATTAGGCACTATAAACATATGCTCCTT-ATTAGGATAAATGAAATTGATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * * * * **
165806 GGAAATCTTTTCTTCGCCTTATTCTCCATAAAATCAAAGTTTGTACTTTATATGAGACATGCATT
64 AGAAATCTTTTCTT-TCCTCATT-TTCTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
* * * *
165871 CATTCTTGTAAAAGTGTCCATTCGTTTTAA
127 GATTCTCGTAAAAGTCTCCATTC-TTTCAA
* * * * * * * * *
165901 GATTGGGAACAAAAAACACATTCCATTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
1 GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
* * * * * ** * *
165966 AGAAGCATGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGT-CTCTTAAAT-AAGATAAACA-
66 A-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACAT
* * * * * * *
166028 TGAATACTCATACTAA-TCCCCTTTCTTTTTAG
126 TG-ATTCTCGTA-AAAGTCTCCATTC-TTTCAA
* * * * * * * * *
166060 GATTAGGCATCGTAAACATAGT-CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAA
1 GATTAGGCACCATAAACACATTCCCT-TCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * * * ** * * * * *
166124 GATA-CGCTTTCTTCCCACCTATTTT-TGTAAAGT-ATAAGTTCATTCCTCAAATTAGACAAACA
65 GAAATC-TTTTCTTTCC-TC-ATTTTCT-TAAAATCA-AAGTTTGTACTTTAAATGAAACAAACA
* * * * * * ***
166186 TGGATTCTAGT-GAGGATCTTCACTCATTTTGT
125 TTGATTCTCGTAAAAG-TCTCCATTC-TTTCAA
* * * * ** *
166218 GATTAGGCACTATAAACACATTCTCCTT-ATTAGGATAAATGACACTGATGATTTTCTTTTGCAT
1 GATTAGGCACCATAAACACATTC-CCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCA-
* * * * * **
166282 GGAAATCTTTTCTTTGCCTCGTTTTCCTTAAAATCAAAGTTTGTACATTAATTGAGACATGCATT
64 AGAAATCTTTTCTTT-CCTCATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATT
166347 GATTCTCGTAAAAGTCTCCATTCTTTCTAA
127 GATTCTCGTAAAAGTCTCCATTCTTTC-AA
* * ** ** * * * *
166377 TATTAGG-AACA-AGAACACATTCCCTTTGTTAGGATGCATGACATTGATGCTTTGGTGTCACAA
1 GATTAGGCACCATA-AACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAA
* * * ** * *
166440 GAGAAGCTTTTCTTCCCACCATTATTGATAGAATCAAAGTTTGT-CTCTTAAAT-AAGACAAGCA
65 GA-AATCTTTTCTTTCC-TCATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAACA
* * * *
166503 -TGAATACTCATACTAA-TC-CACATTCTTTTATA
125 TTG-ATTCTCGTA-AAAGTCTC-CATTCTTTCA-A
166535 GATTAGGCACCATAAACA
1 GATTAGGCACCATAAACA
166553 TAGTCCTCTA
Statistics
Matches: 7552, Mismatches: 2358, Indels: 1530
0.66 0.21 0.13
Matches are distributed among these distances:
150 34 0.00
151 151 0.02
152 37 0.00
153 38 0.01
154 18 0.00
155 74 0.01
156 202 0.03
157 509 0.07
158 2563 0.34
159 2981 0.39
160 223 0.03
161 16 0.00
162 35 0.00
163 98 0.01
164 51 0.01
165 232 0.03
166 53 0.01
167 17 0.00
168 6 0.00
169 8 0.00
170 4 0.00
171 72 0.01
172 23 0.00
173 12 0.00
174 8 0.00
175 5 0.00
176 1 0.00
177 3 0.00
179 1 0.00
181 2 0.00
182 5 0.00
183 2 0.00
184 1 0.00
186 7 0.00
187 8 0.00
189 6 0.00
190 45 0.01
191 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (155 bp):
GATTAGGCACCATAAACACATTCCCTTCATTAGGATAAATGATATTGATGGTTTGGTTTCGCAAG
AAATCTTTTCTTTCCTCATTTTCTTAAAATCAAAGTTTGTACTTTAAATGAAACAAACATTGATT
CTCGTAAAAGTCTCCATTCTTTCAA
Found at i:156210 original size:158 final size:156
Alignment explanation
Indices: 156025--164029 Score: 927
Period size: 158 Copynumber: 50.4 Consensus size: 156
156015 TACTAGTCCA
* * * *
156025 CATTCGTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATACGGATACAGGATATTGATGATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCATA-GGATAAAGGATATTGATGATT
* * *
156090 TGGTTTCACAAGAAACACTTTTTTCCTACCAATTTTTGTAAATTCTAAGTTCGTGCCTTAAAAGA
65 TGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATCAAAGTTCGTGCCTTAAAAGA
* *
156155 CACAAACGTGGATTCTAGTAAGGATCTG
130 CACAAACATGGATTCTAGTAA-GATCTC
* * * * *
156183 CATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGGTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTC-ATAGGATAAAGGATATTGATGATT
** * * * * ** * * * * *
156248 TTCTTTTGCATGGAA-ATTTTTTTGTTGCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAA
65 TGGTTTCGCAAGAAACACTTTTTTCCTACC-AATTTT--TGTAAAATCAAAGTTCGTGCCTTAAA
* * * ** * * *
156311 TGATAGATGCATTGATTCTCGTAAAAGTCTC
127 AGACACAAACATGGATTCTAGTAAGA-TCTC
* * * * * * * * * *
156342 CACTCTTTTCAAGATTGGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCC-TCA-TAGGATAAAGGATATTGATGAT
* * * ** *
156406 TTGGTGTCGCAAGAGAAGC-TTTTCTTTCC-ACC-GTTAATGATAAAATCAAAGTTTGT-CACTT
64 TTGGTTTCGCAAGA-AA-CACTTT-TTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGC-CTT
* * * *
156467 AAATA-AGACAAACATGAATACTCA-TACTAG-TCCC
124 AAA-AGACACAAACATGGATTCT-AGTA--AGATCTC
* * * *
156501 CATTCCTTTTAGGATTAGGCACCATAAACATAGTC-CTCTCATAAGGATAAAGGATATTGATGAT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTC-CTCAT-AGGATAAAGGATATTGATGAT
** * * ** *
156565 TTGGTTTCGCAAGAAATGCTTTTTTCCCACCAATTTTTGTAAATTCTGAGTTCGTGCCATAAAAG
64 TTGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATCAAAGTTCGTGCCTTAAAAG
* * *
156630 CCACAAACGTGGATTCTAGTAAGGATCTG
129 ACACAAACATGGATTCTAGTAA-GATCTC
** * * * * *
156659 CATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTTATGGTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTC-ATAGGATAAAGGATATTGATGATT
** * * ** ** * * * * *
156724 TTCTTTTGCATGGAAATTTTTTCTTTTTTTTTGCCTCATTTTCCT-TAAAATCAAAGTTTGTACT
65 TGGTTTCGCA-AGAAA----CACTTTTTTCCTACC-AATTTT--TGTAAAATCAAAGTTCGTGCC
* * ** * *
156788 TTAAATGAGACATGCATTGATTCTCA-TAAAAGTCTC
122 TTAAAAGACACAAACATGGATTCT-AGTAAGA-TCTC
* * * * * * * *
156824 CATT-GTTTCCAAGATT-GGGATCCAAAAACACATTC-CCTTCTTTAGGATACATGACATTGATG
1 CATTCATTT-CAAGATTAGGCA-CCATAAACACAGTCTCC-TC-ATAGGATAAAGGATATTGATG
* * * ** * * * *
156886 CTTTGGTGTCGCAAGAGAGGCTTTTCTT--T-CCAACGTTATTGATAAAATTAAAATTTGT-CTC
62 ATTTGGTTTCGCAAGAAACACTTTT-TTCCTACCAA--TTTTTG-TAAAATCAAAGTTCGTGC-C
* * * * **
156947 TTAAATA-ATACAAACTTGAATACTCA-TACTTATC-C
122 TTAAA-AGACACAAACATGGATTCT-AGTA-AGATCTC
* * * * * * * * * *
156982 CATTCTTTTCAGGATTAGGAACCATAAACATAGTCTTCTTATATGGATACA-GACATTGAAGCTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCATA-GGATAAAGGATATTGATGATT
* ** * * * * ***
157046 TGGTGTCGCAAGAGAA-GTTGTTCTTTCC-ACC-GTTATTGATAGAATCAAAGTTTGTTTATTAA
65 TGGTTTCGCAAGA-AACACT-TT-TTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGCCTTAA
* ** * *
157108 ATA-AGACAAACATAAATAGTCATACT-A-A-CCC
126 A-AGACACAAACATGGAT--TC-TAGTAAGATCTC
** * ** * * *
157139 ACATTC-TGTTCTGGATTAGGAACCATAAACATGGTCTTCTCATAAGGATACATGG-TATTGATT
1 -CATTCAT-TTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATA-AAGGATATTGATG
* * * * ** ** * * *
157202 CTTTTGTTTCGTAAGAAACGCTTCCTTCCCGCCAATTTTTGTAAAGT-ATAAGTTCACT-CCTCA
62 ATTTGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATCA-AAGTTC-GTGCCTTA
** * * *
157265 ACTGAGACAAACATGGATTTTAGTAAAGATCTT
125 AAAGACACAAACATGGATTCTAGT-AAGATCTC
* * * * ** *
157298 TATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATCATATTGATGGTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCA-TAGGATAAAGGATATTGATGATT
** * * ** * *
157363 TTCTTTTGCATGAAA-ATCTTTTCTTTGCCT--C-ATTTTCCT-TAAAATCAAAGTTTATACTTT
65 TGGTTTCGCAAGAAACA-C-TTT-TTT-CCTACCAATTTT--TGTAAAATCAAAGTTCGTGCCTT
* * ** * * * *
157423 AAATGAGACATGCATTGATTCTCGTAAAAGTCCC
124 AAAAGACACAAACATGGATTCTAGTAAGA-TCTC
* * * * *
157457 CATTC-TTTCCAAGATTAGG-ATCCAAAAACTCA-TCTCCTTCATTAGGATACATGACATTGATG
1 CATTCATTT-CAAGATTAGGCA-CCATAAACACAGTCTCC-TCA-TAGGATAAAGGATATTGATG
* * * ** * * * *
157519 CTTTGGTGTCGCAAGTGAAGCTTTTTTTTCC-A-CAGTTTATGATAAAATCAAAGTTTGT-CTCA
62 ATTTGGTTTCGCAA--GAAACACTTTTTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGC-CT
* * * * *
157581 TAAATA-AGACAAACATGAATACTCA-TACAAATCCC
123 TAAA-AGACACAAACATGGATTCT-AGTA-AGATCTC
* * * * * **
157616 CTTTCTTTTCAAGATTAGGCGCCATAAACATAGTCTTCTCATAAGGATATTGGATATTGATGATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATAAAGGATATTGATGATT
* * * * * *
157681 TGGTTTCGCAAGAAACGA-TTTTTTCCCT-CCAATATTTGCAAATTCTAAGTTCGTGCCTCAAAT
65 TGGTTTCGCAAGAAAC-ACTTTTTT-CCTACCAATTTTTGTAAAATCAAAGTTCGTGCCTTAAAA
* *
157744 GAGACAAACATGGATTCTAGTAAGGATCTT
128 GACACAAACATGGATTCTAGTAA-GATCTC
** * * * * *
157774 CATTCATTTCGTGATTAGGCACTATAAACACAATCTCCTCAATAAGATAAATGATATTGATGGTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTC-ATAGGATAAAGGATATTGATGATT
** * * * * * ** * *
157839 TTCTTTTGCATGGAAA-TCTTTTCTT--TGCCTTATTTTCCT-TAAAATCAAAGTTTATACTTTA
65 TGGTTTCGCA-AGAAACACTTTT-TTCCTACC-AATTTT--TGTAAAATCAAAGTTCGTGCCTTA
* * ** * * * *
157900 AATGATA-ATGCATTGATGCTCGTAAAAGTCTC
125 AAAGACACAAACATGGATTCTAGTAAGA-TCTC
* * * * * * * * * * * *
157932 CACTCTTTTCAAGATTGGGAACCAAAAACTCA-TTTCCTTCATTAGGATACATGACATTGAAGCT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCC-TCA-TAGGATAAAGGATATTGATGAT
* * * * * * * * **
157996 TCGGTGTCGCAAGAGAAGCAGTTCTTTCC-ACC-GTTATTGATAGAATCAAAGTTTGTTTCTTAC
64 TTGGTTTCGCAAGA-AA-CACTTTTTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGCCTTA-
* * *
158059 ATAAG--ACAAACATGAATAGTCATACT-A-ATCTA
125 A-AAGACACAAACATGGAT--TC-TAGTAAGATCTC
* * * ** ** *
158091 TAGTCTTTTCTGGATTAGGCACCATAAACATGGTCTTCTCATACAGATACAGGATAAATGATATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTC-TC-C-T-C--AT--AGGATAAAGGATATT
* * * * * * * *
158156 GATGCTTTGGTTTGGCAAGAAACGCTTTCTTCC-CCCTAATTTTTGTAAAGT-ATAAGTTCATTC
58 GATGATTTGGTTTCGCAAGAAACACTTTTTTCCTACC-AATTTTTGTAAAATCA-AAGTTCGTGC
* ** * * * *
158219 CTCAAATTAGACAAACATGGATTCCAATAAGGATCTT
121 CTTAAAAGACACAAACATGGATTCTAGTAA-GATCTC
* * * * *
158256 CATTCATTTTC-TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGT
1 CATTCA-TTTCAAGATTAGGCACCATAAACACAGTCTCCTCA-TAGGATAAAGGATATTGATGAT
** * * * * *
158320 TTTCTTTTGCATGAAA-ATCCTTTTTTTGCCT--C-ATTTTCCT-TAAAATCAAAGTTTGTACTT
64 TTGGTTTCGCAAGAAACA--C-TTTTTT-CCTACCAATTTT--TGTAAAATCAAAGTTCGTGCCT
* * ** * * *
158380 TAAATGAGACATGCATTGTTTCTCA-TAAAACTCTC
123 TAAAAGACACAAACATGGATTCT-AGTAAGA-TCTC
* * * * * *
158415 CATT-GTTTCCAAGATT-GGGATCCA-ACAACACATTC-CCTTCATTAGGATACATGACATTGAT
1 CATTCATTT-CAAGATTAGGCA-CCATA-AACACAGTCTCC-TCA-TAGGATAAAGGATATTGAT
* * * * ** *
158476 GCTTTGGTGTCGCAAGAGAAGC-TTTTCTTTCC-ACC-GTTAATGATAAAATCAAAGTTTGT-CT
61 GATTTGGTTTCGCAAGA-AA-CACTTT-TTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGC-
* * * *
158537 CTTAAATA-AGACAAACATGAATAGTCATACT-AG-TCCC
121 CTTAAA-AGACACAAACATGGAT--TC-TAGTAAGATCTC
* * * * * *
158574 CATTCCTTTTAGGATTAGGCACTATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATAAAGGATATTGATGATT
** * * *
158639 TGGTTTCGCAAGAAATGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTTAAAAGA
65 TGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATCAAAGTTCGTGCCTTAAAAGA
* *
158704 CACAAACGTGGATTCTAGTAAGGATCTG
130 CACAAACATGGATTCTAGTAA-GATCTC
** * * * *
158732 CATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGGTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTC-ATAGGATAAAGGATATTGATGATT
** * * * * * * * * *
158797 TTCTTTTGCATGCAA-A-TTTTTTCTTTGCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTAA
65 TGGTTTCGCAAGAAACACTTTTTTC-CTACC-AATTTT--TGTAAAATCAAAGTTCGTGCCTTAA
* ** * * *
158859 ATGACACATGCATTGATTCTCGTAAAAGTCTC
126 AAGACACAAACATGGATTCTAGTAAGA-TCTC
* * * * * * * * * *
158891 CACTCTTTTCAAGATTGGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCC-TCA-TAGGATAAAGGATATTGATGAT
* * * * ** *
158955 ATGGTGTCGCAAGAGAAGC-TTTTCTTTCC-ACC-GTTAATGATAAAATCAAAGTTTGT-CACTT
64 TTGGTTTCGCAAGA-AA-CACTTT-TTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGC-CTT
* * * *
159016 AAATA-AGACAAACATGAATACTCA-TACTAG-TCCC
124 AAA-AGACACAAACATGGATTCT-AGTA--AGATCTC
* * * * * *
159050 CATTCCTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGAGAAAGGATATTGATGATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATAAAGGATATTGATGATT
** * * ** * *
159115 TGGTTTCGCAAGAAATGCTTTTTTCCCACCAATTTTTGTAAATTCTGAGTTCGTGCCATAAAAGC
65 TGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATCAAAGTTCGTGCCTTAAAAGA
* *
159180 CACAAACGTGGATTCTAGTAAGGATCTG
130 CACAAACATGGATTCTAGTAA-GATCTC
* * * * * *
159208 CATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTTATGGTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTC-ATAGGATAAAGGATATTGATGATT
** * * * * * * * * * *
159273 TTCTTTTGCATGGAA-A-TTTTTTCTTTGCCTTATTTTCCT-TAAAATCAATGTTTGTACTTTAA
65 TGGTTTCGCAAGAAACACTTTTTTC-CTACC-AATTTT--TGTAAAATCAAAGTTCGTGCCTTAA
* * * *
159335 ATGACACAAGCATTGATTCTCGTATTAG-TCTC
126 AAGACACAAACATGGATTCTAGTA--AGATCTC
* * * * * * * * * *
159367 CACTCTTTTCAAGATTGGGAACCAAAAACACA-T-TCCTTTCATTAGTATACATGACATTGATGC
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCC--TCA-TAGGATAAAGGATATTGATGA
* * ** * * * *
159430 TTTGGTGTCGCAAGAGAGGCTTTTCTT--T-CCAACGTTATTGATAAAATTAAAATTTGT-CTCT
63 TTTGGTTTCGCAAGAAACACTTTT-TTCCTACCAA--TTTTTG-TAAAATCAAAGTTCGTGC-CT
* * * * **
159491 TAAATA-ATACAAACTTGAATACTCA-TACTTATC-C
123 TAAA-AGACACAAACATGGATTCT-AGTA-AGATCTC
* * * * * * *
159525 CATTCTTTTCAGGATTAGGAACCATAAACATAGTCTTCTTATATGGATACAGGAT-TTGATGATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCATA-GGATAAAGGATATTGATGATT
** * * * * * ** *
159589 TGGTTTCGCAAGAAATGCTTTTTTCCCA-TAACTTTTGTAAATTCTAAA-TTCATGCCTCCAATG
65 TGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATC-AAAGTTCGTGCCTTAAAAG
* *
159652 AGACAAACATGGATTCTAGTAAGGATCTT
129 ACACAAACATGGATTCTAGTAA-GATCTC
* * ** * * * * * * *
159681 CATACGTATT-GTGATTAGGCACTATAAACATATTCTCCTTATTAGGATAAATGAAATTGATGGT
1 CATTCAT-TTCAAGATTAGGCACCATAAACACAGTCTCCTCA-TAGGATAAAGGATATTGATGAT
** * * * ** *** * * *
159745 TTTCTTTTGCATGGAAA-TCTTTTCTTCGC--CTTATTCTCCATAAAATCAAAGTTTGTACTTTA
64 TTGGTTTCGCA-AGAAACACTTTT-TTC-CTACCAATT-TTTGTAAAATCAAAGTTCGTGCCTTA
* * * * *
159807 TATG----AGAC----ATTCTTGTAAAAGTCTC
125 AAAGACACAAACATGGATTCTAGTAAGA-TCTC
* * * * * * * * * *
159832 CATTCGTTTTAAGATTGGGAACCAAAAACACA-T-TCCATTCATTAGGATACATGACATTGAAGC
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCC--TCA-TAGGATAAAGGATATTGATGA
* * * * * *
159895 TTTGGTGTCGCAAGAGAAGCA-TGTCTTTCC-ACC-GTTATTGATAGAATCAAAGTTTGT-CTCT
63 TTTGGTTTCGCAAGA-AA-CACT-TTTTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGC-CT
* * * *
159956 TAAATA-AGACAAACATGAATACTCA-TACTA-ATCCC
123 TAAA-AGACACAAACATGGATTCT-AGTA--AGATCTC
* * * * * * *
159991 CTTTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGG-TATTGATGCT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATA-AAGGATATTGATGAT
* * * * * * * *
160055 TTGGTTTTGCAAGATACGCTTTCTTCCCACCTATTTTTGCAAGATATGCTTTGGTTTTGCAAGTT
64 TTGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAA-A-AT-C----------AAAGTT
* * * ** * * *
160120 CATTCCTCAAATTAGACAAACATGGATTCTAGTGAGGATCTT
116 CGTGCCTTAAAAGACACAAACATGGATTCTAGT-AAGATCTC
* *** * * * ** *
160162 CACTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATAACATTGATGATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCA-TAGGATAAAGGATATTGATGATT
** * * * * * * * *
160227 TTCTTTTGCATGGAAATC-TTTTCTTTGCCT--C-GTTTTTCTTAAAATCAAAGTTTGTACTTTA
65 TGGTTTCGCA-AGAAA-CACTTT-TTT-CCTACCAATTTTT-GTAAAATCAAAGTTCGTGCCTTA
** * ** * * *
160288 ACTGAGACATGCATTGATTCTCGTAAAAGTCTC
125 AAAGACACAAACATGGATTCTAGTAAGA-TCTC
* * * * ** ** ** * * *
160321 CATTC-TTTCTAATATT-GGGAACA-AGAACACATTCCTTTTGTTAGGATGCATGACATTGATGC
1 CATTCATTTC-AAGATTAGGCACCATA-AACACAGT-CTCCTCATAGGATAAAGGATATTGATGA
* * * * ** *
160383 TTCGGTGTCGCAAGAGAAGC-TTTTCTTTCC-ACC-GTTAATGATAAAATCACAA-TTTGT-CTC
63 TTTGGTTTCGCAAGA-AA-CACTTT-TTTCCTACCAATTTTTG-TAAAATCA-AAGTTCGTGC-C
* * * *
160443 TTAAATA-AAACAAATATGAATACTCA-TACTA-ATC-C
122 TTAAA-AGACACAAACATGGATTCT-AGTA--AGATCTC
* * * * * * **
160478 C-CTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGACAATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATAAAGGATATTGATGATT
* * * * * *
160542 TGGTTTCGCAAGAAACGCTTTTTTCCCT-CCAGTTTTTGTAAATTCTAAGTTCGTGCCTCAAATG
65 TGGTTTCGCAAGAAACACTTTTTT-CCTACCAATTTTTGTAAAATCAAAGTTCGTGCCTTAAAAG
* * *
160606 AGACAAACATGGACTCTAGTAAGGATCTG
129 ACACAAACATGGATTCTAGTAA-GATCTC
* ** * * * * * *
160635 TATTCATTTCGTGATTAGGCACTATAAACAAATTCTCCTTAATAGGATAAATGATATTGATGGTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCC-TCATAGGATAAAGGATATTGATGATT
** * * * * * * ***
160700 TTCTTTTGCATGGAAA-TCTTTTCTT--TGCCTTATTTTCCT-TAAAATCAAAGTTTGTATTTTA
65 TGGTTTCGCA-AGAAACACTTTT-TTCCTACC-AATTTT--TGTAAAATCAAAGTTCGTGCCTTA
* * ** * * *
160761 AATGAGACATGCATTGATTCTCGTAAAAGTCTC
125 AAAGACACAAACATGGATTCTAGTAAGA-TCTC
* * * * * * * * *
160794 CATTCTTTTCAAGATT-GGGAACAAAAACACATTC-CCTGCATTAGGATACATGACATTGATGCT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCT-CA-TAGGATAAAGGATATTGATGAT
* * * ** * * * *
160857 TTGGTGTCACAAGAGAGGCTTTTCTT--T-CCAACGTTATCGATAAAATCAAAATTTGT-CTCTT
64 TTGGTTTCGCAAGAAACACTTTT-TTCCTACCAA--TTTTTG-TAAAATCAAAGTTCGTGC-CTT
* * * *
160918 AAATA-AGACAAACATGAATACTCA-CACTA-ATC-C
124 AAA-AGACACAAACATGGATTCT-AGTA--AGATCTC
* ** * * *
160951 ACATTCTTTTCTGGATTAGGCACCATAAACATCA-TCTTCTCATAAGGATAAATGATATTGATGC
1 -CATTCATTTCAAGATTAGGCACCATAAACA-CAGTCTCCTCAT-AGGATAAAGGATATTGATGA
* * * * * * **
161015 TTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGT-ATAAGTTCATTCCACAAA
63 TTTGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATCA-AAGTTCGTGCCTTAAA
** * * *
161079 TTAGACAAACATGGATTCTAGCAAGGATCTT
127 AGACACAAACATGGATTCTAGTAA-GATCTC
** * * * * * * *
161110 CATTCATTTCGTGATT-GGATACTATAAACACATTCTCCTCATTAGGATAAATGTTATTGACGGT
1 CATTCATTTCAAGATTAGG-CACCATAAACACAGTCTCCTCA-TAGGATAAAGGATATTGATGAT
** * * * ** * * *
161174 TTTCTTTTGCATGAAA-A-TCTTTTCCTTGCATTATTTTCCT-TAAAATCAAAGTTTGTACTTTA
64 TTGGTTTCGCAAGAAACACTTTTTTCCTACCA--ATTTT--TGTAAAATCAAAGTTCGTGCCTTA
* ** * * *
161236 AATA-AGA-ATGCATTGATTCTCGTAAAAGTCTC
125 AA-AGACACAAACATGGATTCTAGTAAGA-TCTC
* ** * * * * * * * * *
161268 CCTTTTTTTCAAGATTGGGAACCCA-AAACTCATTC-CCTTCATTAGGATACATGACATTGAAGC
1 CATTCATTTCAAGATTAGGCA-CCATAAACACAGTCTCC-TCA-TAGGATAAAGGATATTGATGA
* * * * * * * ***
161331 TTTGGTGTCACAAGAGAA-GCTGTTCTTTCC-ACC-GTTATTGATAGAATCAAAGTTTGTTTATT
63 TTTGGTTTCGCAAGA-AACACT-TT-TTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGCCTT
** * *
161393 AAGTAAG--ACAAACATAAATAGTCATACT-A-A-CCC
124 AA--AAGACACAAACATGGAT--TC-TAGTAAGATCTC
** * ** * * *
161426 ACATTC-TGTTCTGGATTAGGAACCATAAACATGGTCTTCTCATAAGGATACATGG-TATTGATT
1 -CATTCAT-TTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATA-AAGGATATTGATG
* * * * ** ** * * *
161489 CTTTTGTTTCGTAAGAAACGCTTCCTTCCCGCCAATTTTTGTAAAGT-ATAAGTTCACT-CCTCA
62 ATTTGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATCA-AAGTTC-GTGCCTTA
** * *
161552 ACTGAGACAAACATGGATT-TAGTAAAGATCTT
125 AAAGACACAAACATGGATTCTAGT-AAGATCTC
* * ** * ** *
161584 TATTCATTTCATGATTAGGCACTGTAAACACATTCTCCTCATTAGGATAAATCATATTGATGGTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCA-TAGGATAAAGGATATTGATGATT
** * * * ** * *
161649 TTCTTTTGCATGAAA-ATCTTTTCTTTGCCT--C-ATTTTCCT-TAAAATGAAAGTTTATACTTT
65 TGGTTTCGCAAGAAACA-C-TTT-TTT-CCTACCAATTTT--TGTAAAATCAAAGTTCGTGCCTT
* * ** * * * *
161709 AAATGAGACATGCATTGATTCTCGTAAAAGTCCC
124 AAAAGACACAAACATGGATTCTAGTAAGA-TCTC
* * * * *
161743 CATTC-TTTCCAAGATTAGG-ATCCAAAAACTCA-TCTCCTTCATTAGGATACATGACATTGATG
1 CATTCATTT-CAAGATTAGGCA-CCATAAACACAGTCTCC-TCA-TAGGATAAAGGATATTGATG
* * * ** * * *
161805 CTTTGGTGTCGCAAGTGAAGCTTTTTTTTCC-A-CAGTTTATGATAAAATCAAAGTTTGT-CTCT
62 ATTTGGTTTCGCAA--GAAACACTTTTTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGC-CT
* * * * *
161867 TAAATA-AGACAAACATGAATACTTA-TACAAATCCC
123 TAAA-AGACACAAACATGGATTC-TAGTA-AGATCTC
* * * * * **
161902 CATTCTTTTCAAGATTAGGCGCCGTAAACATAGTCTTCTCATAAGGATATTGGATATTGATGATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATAAAGGATATTGATGATT
* * * * * *
161967 TGGTTTCGCAAGAAACGA-TTTTTTCCCT-CTAATTTTTGCAAATTCTAAGTTCGTGCCTCAAAT
65 TGGTTTCGCAAGAAAC-ACTTTTTT-CCTACCAATTTTTGTAAAATCAAAGTTCGTGCCTTAAAA
* *
162030 GAGACAAACATGGATTCTAGTAAGGATCTT
128 GACACAAACATGGATTCTAGTAA-GATCTC
** * * ** * * * *
162060 CATTCATTTCGTGATTAGGCACTATAAACACAATCTCCTTGTCACGATACATGATATTGATGGTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATAAAGGATATTGATGATT
** * * * * * ** * *
162125 TTCTTTTGCATGGAAA-TCTTTTCTT--TGCCTTATTTTCCT-TAAAATCAAAGTTTATACTTTA
65 TGGTTTCGCA-AGAAACACTTTT-TTCCTACC-AATTTT--TGTAAAATCAAAGTTCGTGCCTTA
* * ** * * *
162186 AATGATA-ATGCACT-GATGCTCGTAAAAGTCTC
125 AAAGACACAAACA-TGGATTCTAGTAAGA-TCTC
* * * * * * * * * * * *
162218 CACTCTTTTCAAGATTGGGAACCAAAAACTCA-TTTCCTTCATTAGGATACATGACATTGAAGCT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCC-TCA-TAGGATAAAGGATATTGATGAT
* * * * * * * **
162282 TCGGTGTCGCAAGAGAA-GCTGTTCTTTCC-ACC-GTTATTGATAGAATCAAAGTTTGTTTCTTA
64 TTGGTTTCGCAAGA-AACACT-TT-TTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGCCTTA
* * * *
162344 AATA-AGACAAACA-AGA--ATAGTCAA-ACTAATC
125 AA-AGACACAAACATGGATTCTAGT-AAGA-T-CTC
* ** * * * * * *
162375 CACCTTCTTTTCTGGATTAGGCACCGTAGACATAGTCTTCTCATAAGGATAAATGATATTGATGC
1 CA--TTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATAAAGGATATTGATGA
* * * * * * * *
162440 TTTGGTTTGGCAAGAAACGCTTTCTTCC-CCCTAATTTTTGTAAAGT-ATAAGTTCATTCCTCAA
63 TTTGGTTTCGCAAGAAACACTTTTTTCCTACC-AATTTTTGTAAAATCA-AAGTTCGTGCCTTAA
** * * ** *
162503 ATTAGACAAACATGGATTCCAAAAAGGATCTT
126 AAGACACAAACATGGATTCTAGTAA-GATCTC
* * * * *
162535 CATTCATTTTC-TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGT
1 CATTCA-TTTCAAGATTAGGCACCATAAACACAGTCTCCTCA-TAGGATAAAGGATATTGATGAT
** * * * * * * *
162599 TTTCTTTTG-ATTGAAA-ATCTTTTTTTCTTTTGCCTCATTTTCCT-TAAAATCAAAGTTTGTAC
64 TTGGTTTCGCA-AGAAACA-C-TTTTTTC--CTACC-AATTTT--TGTAAAATCAAAGTTCGTGC
* * * ** * *
162661 TTTAAATGAGACATGCATTGATTCTCA-TAAAAGTCTC
121 CTTAAAAGACACAAACATGGATTCT-AGTAAGA-TCTC
* * * * * * *
162698 CATT-GTTTCCAAGATT-GGGATCCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATG
1 CATTCATTT-CAAGATTAGGCA-CCATAAACACAGTCTCC-TCA-TAGGATAAAGGATATTGATG
* * * * * * ** *
162760 CTTTAGTGTCACAAGAGAAGC-TTTTCTTTCC-ACC-GTTAATGATAAAATCAAAGTTTGT-CTC
62 ATTTGGTTTCGCAAGA-AA-CACTTT-TTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGC-C
* * * *
162821 TTAAATA-AGAC-AACATGAATACTCA-TACTAG-TCCC
122 TTAAA-AGACACAAACATGGATTCT-AGTA--AGATCTC
* * * * *
162856 CATTCCTTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATAAAGGATATTGATGATT
** * * *
162921 TGGTTTCGCAAGAAATGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTTAAAAGA
65 TGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATCAAAGTTCGTGCCTTAAAAGA
* *
162986 CACAAACGTGGATTCTAGTAAGGATCTG
130 CACAAACATGGATTCTAGTAA-GATCTC
* * * * *
163014 CATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGGTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTC-ATAGGATAAAGGATATTGATGATT
** * * * * * * * * *
163079 TTCTTTTGCATGGAA-A-TTTTTTCGTTGCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTAA
65 TGGTTTCGCAAGAAACACTTTTTTC-CTACC-AATTTT--TGTAAAATCAAAGTTCGTGCCTTAA
* * * ** * * *
163141 ATGATAGATGCATTGATTCTCGTAAAAGTCTC
126 AAGACACAAACATGGATTCTAGTAAGA-TCTC
* * * * * * * * * *
163173 CACTCTTTTCAAGATTGGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCC-TCA-TAGGATAAAGGATATTGATGAT
* * * * ** *
163237 TTGGTGTAGCAAGAGAAGC-TTTTCTTTCC-ACC-GTTAATGATAAAATCAAAGTTTGT-CACTT
64 TTGGTTTCGCAAGA-AA-CACTTT-TTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGC-CTT
* * * *
163298 AAATA-AGACAAACATGAATACTCA-TACTAG-TCCC
124 AAA-AGACACAAACATGGATTCT-AGTA--AGATCTC
* * * *
163332 CATTCCTTTTAGGATTAGGCACCATAAACATAGTC-CTCTCATAAGGATAAAGGATATTGATGAT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTC-CTCAT-AGGATAAAGGATATTGATGAT
** * * ** *
163396 TTGGTTTCGCAAGAAATGCTTTTTTCCCACCAATTTTTGTAAATTCTGAGTTCGTGCCATAAAAG
64 TTGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATCAAAGTTCGTGCCTTAAAAG
* * *
163461 CCACAAACGTGGATTCTAGTAATGATCTG
129 ACACAAACATGGATTCTAGTAA-GATCTC
** * * * * *
163490 CATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTTATGGTT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTC-ATAGGATAAAGGATATTGATGATT
** * * ** ** * * * * *
163555 TTCTTTTGCATGGAAATTTTTTCTTTTTTTTTGCCTCATTTTCCT-TAAAATCAAAGTTTGTACT
65 TGGTTTCGCA-AGAAA----CACTTTTTTCCTACC-AATTTT--TGTAAAATCAAAGTTCGTGCC
* * ** * *
163619 TTAAATGAGACATGCATTGATTCTCA-TAAAAGTCTC
122 TTAAAAGACACAAACATGGATTCT-AGTAAGA-TCTC
* * * * * * * *
163655 CATT-GTTTCCAAGATT-GGGATCCAAAAACACATTC-CCTTCTTTAGGATACATGACATTGATG
1 CATTCATTT-CAAGATTAGGCA-CCATAAACACAGTCTCC-TC-ATAGGATAAAGGATATTGATG
* * * ** * ** *
163717 CTTTGGTGTCGCAAGAGAGGCTTTTCTTTCC-ACC-GTTAATGATAAAATCAAAGTTTGT-CTCT
62 ATTTGGTTTCGCAAGAAACAC-TTT-TTTCCTACCAATTTTTG-TAAAATCAAAGTTCGTGC-CT
* * * *
163779 TAAATA-AGACAAACATGAATAGTCATACT-AG-TCCC
123 TAAA-AGACACAAACATGGAT--TC-TAGTAAGATCTC
* * * * * * *
163814 CATTCCTTTTAGGATTAGGCACCATAAACATAGTTTTCTCATAAGGACAAAGGATATTGATGATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCAT-AGGATAAAGGATATTGATGATT
** * * ** * *
163879 TGGTTTCGCAAGAAATGCTTTTTTCCCACCAATTTTTGTAAATTCTGAGTTCGTGCCATAAAAGC
65 TGGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATCAAAGTTCGTGCCTTAAAAGA
* *
163944 CACAAACGTGGATTCTAGTAAGGATCTG
130 CACAAACATGGATTCTAGTAA-GATCTC
** * * *
163972 CATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATT
1 CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTC-ATAGGATAAAGGATATT
164030 TATGGTTTTC
Statistics
Matches: 5574, Mismatches: 1650, Indels: 1246
0.66 0.19 0.15
Matches are distributed among these distances:
149 3 0.00
150 7 0.00
151 85 0.02
152 5 0.00
153 2 0.00
154 5 0.00
155 52 0.01
156 165 0.03
157 442 0.08
158 2029 0.36
159 1981 0.36
160 130 0.02
161 68 0.01
162 48 0.01
163 121 0.02
164 58 0.01
165 220 0.04
166 42 0.01
169 1 0.00
170 4 0.00
171 89 0.02
172 12 0.00
173 3 0.00
174 2 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (156 bp):
CATTCATTTCAAGATTAGGCACCATAAACACAGTCTCCTCATAGGATAAAGGATATTGATGATTT
GGTTTCGCAAGAAACACTTTTTTCCTACCAATTTTTGTAAAATCAAAGTTCGTGCCTTAAAAGAC
ACAAACATGGATTCTAGTAAGATCTC
Found at i:156262 original size:476 final size:475
Alignment explanation
Indices: 155365--157058 Score: 2401
Period size: 476 Copynumber: 3.5 Consensus size: 475
155355 ATGACATTGA
* * * * * *
155365 ATGCATTGATTCTTGTAAAATTCTCCATTCTATT-TAAGATTGGGAACCAAAAACCCATTTCTTT
1 ATGCATTGATTCTCGTAAAAGTCTCCATTCT-TTCCAAGATTGGGAACCAAAAACACATTCCCTT
* * * *
155429 CATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTGTCTTTCCACCGTTATCGA
65 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGA
* * * * *
155494 TAGAATCAAAATTTATCTCTTAAATAAGACGAACATGAATACTCACACTAATTCACATTCTTTAC
130 TAAAATCAAAATTTATCTCTTAAATAAGACAAACATGAATACTCATACTAGTCCACATTCTTT-C
* * * * *
155559 TGGATTAGGCACCATAAACATCA-TCTTCTCATAAAGATAAATGATATTGATGCTTTGGGTTCGC
194 AGGATTAGGCACCATAAACAT-AGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGC
* * * * * * * ** * *
155623 AAGAAACGCTTTCTTCCCACCAATTTTTCTAAAGTATAAGTTCATTCCTCAAATTAGACAAACAT
258 AAGAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTTAAAAGACACAAACGT
* * * * *
155688 GGATTCTTGTAAGGATCTTCATTCATTTTGTGATTCGGCACTATAAACACATTCTCCTCATTAGG
323 GGATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGG
* * *
155753 ATAAATGATATTGATGGTTTTCTTTTACATGGAAATCTTTTCTTTGCCTCGTTTTCCTTAAAATC
388 ATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTTTTTGCCTCATTTTCCTTAAAATC
155818 AAAGTTTGTACTTTAAATGAAAC
453 AAAGTTTGTACTTTAAATGAAAC
155841 ATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTC
1 ATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTC
* * *
155906 ATTAGGATACATGACATTAATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACATTATTGAT
66 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGAT
* * * * * *
155971 AAAATCAAAGTCTACCTCTTAAATAAGGCAAATATAAATACTCATACTAGTCCACATTCGTTTCA
131 AAAATCAAAATTTATCTCTTAAATAAGACAAACATGAATACTCATACTAGTCCACATTC-TTTCA
* * * *
156036 AGATTAGGCACCATAAACATAGTCTTCTCATACGGATACAGGATATTGATGATTTGGTTTCACAA
195 GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAA
* *
156101 GAAACACTTTTTTCCTACCAATTTTTGTAAATTCTAAGTTCGTGCCTTAAAAGACACAAACGTGG
260 GAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTTAAAAGACACAAACGTGG
*
156166 ATTCTAGTAAGGATCTGCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCAATAGGAT
325 ATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGGAT
*
156231 AAATGATATTGATGGTTTTCTTTTGCATGGAAAT-TTTTTTGTTGCCTTATTTTCCTTAAAATCA
390 AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTTT-TTGCCTCATTTTCCTTAAAATCA
* *
156295 AAGTTTGTACTTTAAATGATAG
454 AAGTTTGTACTTTAAATGAAAC
* *
156317 ATGCATTGATTCTCGTAAAAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTC
1 ATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTC
* *
156382 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGAT
66 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGAT
* * * * *
156447 AAAATCAAAGTTTGTCACTTAAATAAGACAAACATGAATACTCATACTAGTCCCCATTCCTTTTA
131 AAAATCAAAATTTATCTCTTAAATAAGACAAACATGAATACTCATACTAGTCCACATT-CTTTCA
*
156512 GGATTAGGCACCATAAACATAGTCCTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAA
195 GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAA
* * * *
156577 GAAATGCTTTTTTCCCACCAATTTTTGTAAATTCTGAGTTCGTGCCATAAAAGCCACAAACGTGG
260 GAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTTAAAAGACACAAACGTGG
156642 ATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGGAT
325 ATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGGAT
*
156707 AAATGATATTTATGGTTTTCTTTTGCATGGAAATTTTTTCTTTTTTTTTGCCTCATTTTCCTTAA
390 AAATGATATTGATGGTTTTCTTTTGCATGGAAA-----TC-TTTTTTTTGCCTCATTTTCCTTAA
*
156772 AATCAAAGTTTGTACTTTAAATGAGAC
449 AATCAAAGTTTGTACTTTAAATGAAAC
* * *
156799 ATGCATTGATTCTCATAAAAGTCTCCATTGTTTCCAAGATTGGGATCCAAAAACACATTCCCTTC
1 ATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTC
* *
156864 TTTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATTGAT
66 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGAT
* * * *
156929 AAAATTAAAATTTGTCTCTTAAATAATACAAACTTGAATACTCATACTTA-TCC-CATTCTTTTC
131 AAAATCAAAATTTATCTCTTAAATAAGACAAACATGAATACTCATAC-TAGTCCACATTC-TTTC
* * * * * * * *
156992 AGGATTAGGAACCATAAACATAGTCTTCTTATATGGATACA-GACATTGAAGCTTTGGTGTCGCA
194 AGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCA
157056 AGA
259 AGA
157059 GAAGTTGTTC
Statistics
Matches: 1090, Mismatches: 114, Indels: 24
0.89 0.09 0.02
Matches are distributed among these distances:
475 8 0.01
476 795 0.73
477 4 0.00
480 23 0.02
481 44 0.04
482 208 0.19
483 8 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (475 bp):
ATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTC
ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGAT
AAAATCAAAATTTATCTCTTAAATAAGACAAACATGAATACTCATACTAGTCCACATTCTTTCAG
GATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAG
AAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTTAAAAGACACAAACGTGGA
TTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGGATA
AATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTTTTTGCCTCATTTTCCTTAAAATCAAA
GTTTGTACTTTAAATGAAAC
Found at i:157325 original size:639 final size:635
Alignment explanation
Indices: 156345--159610 Score: 1812
Period size: 634 Copynumber: 5.1 Consensus size: 635
156335 AAGTCTCCAC
* * * * * * *
156345 TCTTTTCAAGATTGGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTG
1 TCTTTTCAAGATTAGGAACCATAAACATAGTCTTC-TCATAAGGATACATGACATTGAAGCTTTG
156409 GTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCACTTAAATAAG
65 GTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCACTTAAATAAG
* * *
156474 ACAAACATGAATACTCATACTAGTCCCCATTCCTTTTAGGATTAGGCACCATAAACATAGTCCTC
130 ACAAACATAAATACTCATACTAGACCCCATTCCTTTTAGGATTAGGAACCATAAACATAGTCCTC
* **
156539 TCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACCAATTTTTG
195 TCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTCCTTCCCACCAATTTTTG
* * * * * * *
156604 TAAATTCTGAGTTCGTGCCATAAAAGCCACAAACGTGGATTCTAGTAAGGATCTGCATTCATTTC
260 TAAAGTATAAGTTCCTGCCATAAAAGACACAAACATGGATTCTAGTAAAGATCTGCATTCATTTC
* * *
156669 GTGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTTATGGTTTTCTTTTGCA
325 ATGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATCATATTGATGGTTTTCTTTTGCA
* * *
156734 TGGAAATTTTTTCTTTTTTTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAC
390 T-GAAA----ATC-TTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAGAC
* * *
156799 ATGCATTGATTCTCATAAAAGTCTCCATTGTTTCCAAGATTGGGATCCAAAAACACAT-TCCCTT
449 ATGCATTGATTCTCATAAAAGTCCCCATTCTTTCCAAGATTAGGATCCAAAAACACATCT-CCTT
* *
156863 CTTTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCA-ACG-TTATT
513 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACA-GTTTA-T
* * * * **
156926 GATAAAATTAAAATTTGTCTCTTAAATAATACAAACTTGAATACTCATACTTAT-CCCAT
576 GATAAAATCAAAATTTGTCTCATAAATAAGACAAACATGAATACTCATACAAATCCCCAT
* * *
156985 TCTTTTCAGGATTAGGAACCATAAACATAGTCTTCTTATATGGATACA-GACATTGAAGCTTTGG
1 TCTTTTCAAGATTAGGAACCATAAACATAGTCTTCTCATAAGGATACATGACATTGAAGCTTTGG
* * *
157049 TGTCGCAAGAGAAG-TTGTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTTTA-TTAAATAA
66 TGTCGCAAGAGAAGCTT-TTCTTTCCACCGTTAATGATAAAATCAAAGTTTG-TCACTTAAATAA
* *
157112 GACAAACATAAATAGTCATACTA-ACCCACATT-CTGTTCT-GGATTAGGAACCATAAACATGGT
129 GACAAACATAAATACTCATACTAGACCC-CATTCCT-TT-TAGGATTAGGAACCATAAACATAGT
* * ** * * *
157174 CTTCTCATAAGGATACATGG-TATTGATTCTTTTGTTTCGTAAGAAACGCTTCCTTCCCGCCAAT
191 CCTCTCATAAGGATA-AAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTCCTTCCCACCAAT
** * * **
157238 TTTTGTAAAGTATAAGTTCACT-CC-TCAACTGAGACAAACATGGATTTTAGTAAAGATCTTTAT
255 TTTTGTAAAGTATAAGTTC-CTGCCAT-AAAAGACACAAACATGGATTCTAGTAAAGATCTGCAT
*
157301 TCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATCATATTGATGGTTTTC
318 TCATTTCATGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATCATATTGATGGTTTTC
157366 TTTTGCATGAAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAGA
383 TTTTGCATGAAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAGA
* *
157431 CATGCATTGATTCTCGTAAAAGTCCCCATTCTTTCCAAGATTAGGATCCAAAAACTCATCTCCTT
448 CATGCATTGATTCTCATAAAAGTCCCCATTCTTTCCAAGATTAGGATCCAAAAACACATCTCCTT
* *
157496 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGTGAAGCTTTTTTTTCCACAGTTTATGA
513 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACAGTTTATGA
* *
157561 TAAAATCAAAGTTTGTCTCATAAATAAGACAAACATGAATACTCATACAAATCCCCTT
578 TAAAATCAAAATTTGTCTCATAAATAAGACAAACATGAATACTCATACAAATCCCCAT
** * * * *
157619 TCTTTTCAAGATTAGGCGCCATAAACATAGTCTTCTCATAAGGATA-TTGGATATTGATGATTTG
1 TCTTTTCAAGATTAGGAACCATAAACATAGTCTTCTCATAAGGATACAT-GACATTGAAGCTTTG
* * * * ** * * * * * *
157683 GTTTCGCAAGA-AACGATTTT-TTCCCTCCAATATTTG-CAAATTCTAAGTTCGTGC-CTCAAAT
65 GTGTCGCAAGAGAA-GCTTTTCTTTCCACCGTTA-ATGATAAAATCAAAGTTTGT-CACTTAAAT
* ** * ** * * * * *
157744 GAGACAAACATGGAT--TC-TAGTAAGGATCTTCATT-CATTTCGTGATTAGGCACTATAAACAC
127 AAGACAAACATAAATACTCATACT-A-GA-CCCCATTCCTTTTAG-GATTAGGAACCATAAACAT
* * * ** * * * * **
157805 AAT-CTCCTCAATAA-GATAAATGATATTGATGGTTTTCTTTTGCATGGAAATC-TTTTCTTTGC
188 AGTCCT-CTC-ATAAGGATAAAGGATATTGATGATTTGGTTTCGCA-AGAAA-CGCTTCCTTCCC
** * ** * ** * * ** * * *
157867 -CTTATTTTCCT-TAAAATCA-AAGTTTATACTTTAAATGATA-ATGCATTGATGCTCGTAAA-A
249 ACCAATTTT--TGTAAAGT-ATAAGTTCCTGCCATAAAAGACACAAACATGGATTCTAGTAAAGA
* * * * * * * * * * * * *
157927 GTCTCCACTCTTTTCAAGATTGGGAACCAAAAACTCATT-TCCTTCATTAGGATACATGACATTG
311 -TCTGCATTCATTTCATGATTAGGCACTATAAACACATTCTCC-TCAATAGGATAAATCATATTG
* * *** * * * * * ** * * ** * * *
157991 AAGCTTCGGTGTCGCAAGAGAAGCAGTTCTTT-CCACCGTTATT-GATAGAATCAAAGTTTGT-T
374 ATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCC-TCATT-TTCCTTAAAATCAAAGTTTATAC
* * ** ** * *** * * **
158053 TCTTACATAAGACAAACA-TGAATAGTCATACTAA-TCTATAGTCTTTTCTGGATTAGGCA-CCA
437 T-TTAAATGAGACATGCATTG-ATTCTCATA-AAAGTCCCCATTCTTTCCAAGATTAGG-ATCCA
* * * * * * * * *
158115 TAAACATGGTCTTCTCATACAGATACAGGATAAATGATATTGATGCTTTGGTTTGGCAAGA-AAC
498 AAAACA----CATCTCCTTC--AT-TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA-
* * * * * * ** * * *
158179 GC-TTTCTTCCCCCTAATTTTTG-TAAAGT-ATAAGTTCAT-TCCTCAAATTAGACAAACATGGA
555 GCTTTTCTTTCCAC-AGTTTATGATAAAATCA-AAATTTGTCTCAT-AAATAAGACAAACATGAA
* * **
158240 TTC-CAATA-AGGATCTTCAT
617 TACTC-ATACA-AATCCCCAT
* * * * * * * * * * * *
158259 TCATTTTC-TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
1 TC-TTTTCAAGATTAGGAACCATAAACATAGTCTTCTCATAAGGATACATGACATTGAAGCTTTG
* * * * * * * * * **
158323 CTTTTGCATGAAAATCCTTTT-TTTGCC-TCATT-TTCCTTAAAATCAAAGTTTGT-ACTTTAAA
65 GTGTCGCAAGAGAA-GCTTTTCTTT-CCACCGTTAAT-GATAAAATCAAAGTTTGTCAC-TTAAA
* ** *** * * * * * * *
158384 TGAGACATGCATTGTTTCTCATA--AAACTCTCCATT-GTTTCCAAGATTGGGATCCA-ACAACA
126 TAAGACAAACATAAATACTCATACTAGAC-C-CCATTCCTTT-TAGGATTAGGAACCATA-AACA
* * * * * * * * * *
158445 CATTCC-CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA-GCTTTTCTTTCC
187 TAGTCCTC-TCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGA-AACGC-TTCCTTCCC
* ** * * * *
158508 ACC-GTTAATGATAAAATCA-AAGTT--TGTCTCTTAAATA-AGACAAACATGAATAGTC-A-TA
249 ACCAATTTTTG-TAAAGT-ATAAGTTCCTG-C-CATAAA-AGACACAAACATGGAT--TCTAGTA
* ** * * * * * * **
158566 CTAG-TCCCCATTCCTTTTAGGATTAGGCACTATAAACATAGTCTTCTC-ATAAGGATAAAGGAT
307 -AAGATCTGCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCAAT-AGGATAAATCAT
* ** * * * * * *
158629 ATTGATGATTTGGTTTCGCAAG-AAATGC-TTT-TTTCCCACCAATTTT--TGTAAATTCTAAGT
370 ATTGATGGTTTTCTTTTGCATGAAAAT-CTTTTCTTTGCC-TC-ATTTTCCT-TAAAATCAAAGT
** * * * * ** * * * ** **
158689 TCGTGCCTTAAAAGACACAAACGTGGATTCT-AGT-AAGGATCTGCATTCATTT-CGTGATTAGG
431 TTATACTTTAAATGAGACATGCATTGATTCTCA-TAAAAG-TCCCCATTC-TTTCCAAGATTAGG
* * * * * * ** * * *
158751 CA-CTATAAACACATTCTCC-TCAATAGGATAAATGATATTGATGGTTTTCTTTTGCATGCA-AA
493 -ATCCAAAAACACA-TCTCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG-AGAA
** ** ** * * * * **
158813 TTTTTTCTTTGCCTTA-TTT-TCCTTAAAATCAAAGTTTGTACT-TTAAATGACACATGCATTG-
555 GCTTTTCTTT-CCACAGTTTAT-GATAAAATCAAAATTTGT-CTCATAAATAAGACAAACA-TGA
* * * *
158874 ATTCTCGTA-AAAGTCTCCAC
616 ATACTCATACAAA-TCCCCAT
* * * * * * * *
158894 TCTTTTCAAGATTGGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTATG
1 TCTTTTCAAGATTAGGAACCATAAACATAGTCTTC-TCATAAGGATACATGACATTGAAGCTTTG
158958 GTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCACTTAAATAAG
65 GTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCACTTAAATAAG
* * * *
159023 ACAAACATGAATACTCATACTAGTCCCCATTCCTTTTAGGATTAGGCACCATAAACATAGTCTTC
130 ACAAACATAAATACTCATACTAGACCCCATTCCTTTTAGGATTAGGAACCATAAACATAGTCCTC
* * **
159088 TCATAAGGAGAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACCAATTTTTG
195 TCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTCCTTCCCACCAATTTTTG
* * * * * * *
159153 TAAATTCTGAGTTCGTGCCATAAAAGCCACAAACGTGGATTCTAGTAAGGATCTGCATTCATTTC
260 TAAAGTATAAGTTCCTGCCATAAAAGACACAAACATGGATTCTAGTAAAGATCTGCATTCATTTC
* *
159218 ATGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTTATGGTTTTCTTTTGCA
325 ATGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATCATATTGATGGTTTTCTTTTGCA
* * * * * * *
159283 TGGAAATTTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGACACAAGCAT
390 TGAAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAGACATGCAT
* ** * * * * *
159348 TGATTCTCGTATTAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACAT-TCCTTTCATTAG
455 TGATTCTCATAAAAGTCCCCATTCTTTCCAAGATTAGGATCCAAAAACACATCTCC-TTCATTAG
* *
159412 TATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCA-ACG-TTATTGATAAA
519 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACA-GTTTA-TGATAAA
* * * * **
159475 ATTAAAATTTGTCTCTTAAATAATACAAACTTGAATACTCATACTTAT-CCCAT
582 ATCAAAATTTGTCTCATAAATAAGACAAACATGAATACTCATACAAATCCCCAT
* * * * * * *
159528 TCTTTTCAGGATTAGGAACCATAAACATAGTCTTCTTATATGGATACAGGA-TTTGATGATTTGG
1 TCTTTTCAAGATTAGGAACCATAAACATAGTCTTCTCATAAGGATACATGACATTGAAGCTTTGG
*
159592 TTTCGCAAGA-AATGCTTTT
66 TGTCGCAAGAGAA-GCTTTT
159611 TTCCCATAAC
Statistics
Matches: 1984, Mismatches: 487, Indels: 317
0.71 0.17 0.11
Matches are distributed among these distances:
631 3 0.00
632 8 0.00
633 255 0.13
634 488 0.25
635 406 0.20
636 33 0.02
637 5 0.00
638 23 0.01
639 294 0.15
640 161 0.08
641 226 0.11
642 74 0.04
643 5 0.00
644 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (635 bp):
TCTTTTCAAGATTAGGAACCATAAACATAGTCTTCTCATAAGGATACATGACATTGAAGCTTTGG
TGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCACTTAAATAAGA
CAAACATAAATACTCATACTAGACCCCATTCCTTTTAGGATTAGGAACCATAAACATAGTCCTCT
CATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTCCTTCCCACCAATTTTTGT
AAAGTATAAGTTCCTGCCATAAAAGACACAAACATGGATTCTAGTAAAGATCTGCATTCATTTCA
TGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATCATATTGATGGTTTTCTTTTGCAT
GAAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAGACATGCATT
GATTCTCATAAAAGTCCCCATTCTTTCCAAGATTAGGATCCAAAAACACATCTCCTTCATTAGGA
TACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACAGTTTATGATAAAATCA
AAATTTGTCTCATAAATAAGACAAACATGAATACTCATACAAATCCCCAT
Found at i:161210 original size:475 final size:475
Alignment explanation
Indices: 156981--164643 Score: 10323
Period size: 476 Copynumber: 16.1 Consensus size: 475
156971 CATACTTATC
* * * * * * *
156981 CCATTCTTTTCAGGATTAGGAACCATAAACATAGT--CTTCTTATATGGATACA-GACATTGAAG
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT-TA-GGATACATGACATTGATG
* * *
157043 CTTTGGTGTCGCAAGAGAAG-TTGTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTTTATTA
64 CTTTGGTGTCGCAAGAGAAGCTT-TTCTTTCCACCGTTA-TGATAAAATCAAAGTTTGTCTCTTA
* * * * *
157107 AATAAGACAAACATAAATAGTCATACTAA-CCCACATTCTGTTCTGGATTAGGAACCATAAACAT
127 AATAAGACAAACATGAATACTCATACTAATCCC-CATTCTTTTCAGGATTAGGCACCATAAACAT
* * ** * * ** *
157171 GGTCTTCTCATAAGGATACATGG-TATTGATTCTTTTGTTTCGTAAGAAACGCTTCCTTCCCGCC
191 AGTCTTCTCATAAGGATA-AAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACC
* * * * * *
157235 AATTTTTGTAAAGTATAAGTTCACT-CCTCAACTGAGACAAACATGGATTTTAGTAAAGATCTTT
255 AATTTTTGTAAATTCTAAGTTCA-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
* *
157299 ATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATCATATTGATGGTTT
319 ATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTT
* * *
157364 TCTTTTGCATGAAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTATACTTTAAATGA
384 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA
*
157429 GACATGCATTGATTCTCGTAAAAGTCC
449 GACATGCATTGATTCTCGTAAAAGTCT
* * * *
157456 CCATTCTTTCCAAGATTAGGATCCAAAAACTCA-TCTCCTTCATTAGGATACATGACATTGATGC
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGC
* * * *
157520 TTTGGTGTCGCAAGTGAAGCTTTTTTTTCCACAGTTTATGATAAAATCAAAGTTTGTCTCATAAA
65 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCG-TTATGATAAAATCAAAGTTTGTCTCTTAAA
* * * *
157585 TAAGACAAACATGAATACTCATACAAATCCCCTTTCTTTTCAAGATTAGGCGCCATAAACATAGT
129 TAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGT
** * * *
157650 CTTCTCATAAGGATATTGGATATTGATGATTTGGTTTCGCAAGAAACGATTTTTTCCCTCCAATA
194 CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATT
* *
157715 TTTGCAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
259 TTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
* * *
157780 TTTCGTGATTAGGCACTATAAACACAATCTCCTCAATAAGATAAATGATATTGATGGTTTTCTTT
324 TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
* *
157845 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAATGATA-AT
389 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAT
*
157909 GCATTGATGCTCGTAAAAGTCT
454 GCATTGATTCTCGTAAAAGTCT
* * * *
157931 CCACTCTTTTCAAGATTGGGAACCAAAAACTCATTTCCTTCATTAGGATACATGACATTGAAGCT
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* ** * * *
157996 TCGGTGTCGCAAGAGAAGCAGTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTTTCTTACAT
66 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA-TGATAAAATCAAAGTTTGTCTCTTAAAT
* *** * * *
158061 AAGACAAACATGAATAGTCATACTAATCTATAGTCTTTTCTGGATTAGGCACCATAAACATGGTC
130 AAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * *
158126 TTCTCATACAGATACAGGATAAATGATATTGATGCTTTGGTTTGGCAAGAAACGCTTTCTTCCC-
195 -T-TC-T-C--ATA-AGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCA
* * * * * *
158190 CCTAATTTTTGTAAAGTATAAGTTCATTCCTCAAATTAGACAAACATGGATTCCAATAAGGATCT
253 CC-AATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCT
158255 TCATTCATTTTC-TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGG
317 TCATTCA-TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGG
* *
158319 TTTTCTTTTGCATGAAAATCCTTTT-TTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAA
381 TTTTCTTTTGCATGGAAAT-CTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAA
* * *
158383 ATGAGACATGCATTGTTTCTCATAAAACTCT
445 ATGAGACATGCATTGATTCTCGTAAAAGTCT
* * * *
158414 CCATTGTTTCCAAGATTGGGATCCAACAACACATTCCCTTCATTAGGATACATGACATTGATGCT
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
158479 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAAT
66 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTT-ATGATAAAATCAAAGTTTGTCTCTTAAAT
* * *
158544 AAGACAAACATGAATAGTCATACTAGTCCCCATTCCTTTT-AGGATTAGGCACTATAAACATAGT
130 AAGACAAACATGAATACTCATACTAATCCCCATT-CTTTTCAGGATTAGGCACCATAAACATAGT
*
158608 CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACCAATT
194 CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATT
* * * * * *
158673 TTTGTAAATTCTAAGTTCGTGCCTTAAAAGACACAAACGTGGATTCTAGTAAGGATCTGCATTCA
259 TTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
*
158738 TTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGGTTTTCTTT
324 TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
* * *
158803 TGCATGCAAATTTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGACACAT
389 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAT
158868 GCATTGATTCTCGTAAAAGTCT
454 GCATTGATTCTCGTAAAAGTCT
*
158890 CCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* *
158955 ATGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCACTTAAAT
66 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTT-ATGATAAAATCAAAGTTTGTCTCTTAAAT
*
159020 AAGACAAACATGAATACTCATACTAGTCCCCATTCCTTTT-AGGATTAGGCACCATAAACATAGT
130 AAGACAAACATGAATACTCATACTAATCCCCATT-CTTTTCAGGATTAGGCACCATAAACATAGT
* *
159084 CTTCTCATAAGGAGAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACCAATT
194 CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATT
* * * ** * *
159149 TTTGTAAATTCTGAGTTCGTGCCAT-AAAAGCCACAAACGTGGATTCTAGTAAGGATCTGCATTC
259 TTTGTAAATTCTAAGTTCATGCC-TCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTC
* * *
159213 ATTTCATGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTTATGGTTTTCTT
323 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTT
* * *
159278 TTGCATGGAAATTTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGACACA
388 TTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACA
* **
159343 AGCATTGATTCTCGTATTAGTCT
453 TGCATTGATTCTCGTAAAAGTCT
* * *
159366 CCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGTATACATGACATTGATGCT
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* * * *
159431 TTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATTGATAAAATTAAAATTTGTCTCTTAAAT
66 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA-TGATAAAATCAAAGTTTGTCTCTTAAAT
* * * *
159496 AATACAAACTTGAATACTCATACTTAT-CCCATTCTTTTCAGGATTAGGAACCATAAACATAGTC
130 AAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * * * *
159560 TTCTTATATGGATACAGGAT-TTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCA-TAACTT
195 TTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTT
* * * *
159623 TTGTAAATTCTAAATTCATGCCTCCAATGAGACAAACATGGATTCTAGTAAGGATCTTCATACGT
260 TTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCAT
* * *
159688 ATT-GTGATTAGGCACTATAAACATATTCTCCTTATTAGGATAAATGAAATTGATGGTTTTCTTT
325 -TTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
* * * *
159752 TGCATGGAAATCTTTTCTTCGCCTTATTCTCCATAAAATCAAAGTTTGTACTTTATATGAG--A-
389 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAT
*
159814 -C----ATTCTTGTAAAAGTCT
454 GCATTGATTCTCGTAAAAGTCT
* *
159831 CCATTCGTTTT-AAGATTGGGAACCAAAAACACATTCCATTCATTAGGATACATGACATTGAAGC
1 CCATTC-TTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
* * *
159895 TTTGGTGTCGCAAGAGAAGCATGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAA
65 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA-TGATAAAATCAAAGTTTGTCTCTTAAA
*
159960 TAAGACAAACATGAATACTCATACTAATCCCCTTTCTTTTCAGGATTAGGCACCATAAACATAGT
129 TAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGT
* * * * * *
160025 CTTCTCATAAGGATACATGG-TATTGATGCTTTGGTTTTGCAAGATACGCTTTCTTCCCACCTAT
194 CTTCTCATAAGGATA-AAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAAT
* * * *
160089 TTTTGCAAGATATGCTTTGGTTTTGCAAGTTCATTCCTCAAATTAGACAAACATGGATTCTAGTG
258 TTTTGTAA-AT-T-C--------T--AAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * *
160154 AGGATCTTCACTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATAACAT
310 AGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATAT
* ** *
160219 TGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCGTTTTTCTTAAAATCAAAGTTTGTAC
375 TGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
*
160284 TTTAACTGAGACATGCATTGATTCTCGTAAAAGTCT
440 TTTAAATGAGACATGCATTGATTCTCGTAAAAGTCT
* * * ** *
160320 CCATTC-TTTCTAATATTGGGAA-CAAGAACACATTCCTTTTGTTAGGATGCATGACATTGATGC
1 CCATTCTTTTC-AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
*
160383 TTCGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCACAA-TTTGTCTCTTAA
65 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTT-ATGATAAAATCA-AAGTTTGTCTCTTAA
* *
160447 ATAAAACAAATATGAATACTCATACTAATCCCC--TCTTTTCAGGATTAGGCACCATAAACATAG
128 ATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAG
* ** * *
160510 TCTTCTCATAAGGATACAGGATATTGACAATTTGGTTTCGCAAGAAACGCTTTTTTCCCTCCAGT
193 TCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAAT
* *
160575 TTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGACTCTAGTAAGGATCTGT-ATT
258 TTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCT-TCATT
* * *
160639 CATTTCGTGATTAGGCACTATAAACAAATTCTCCTTAATAGGATAAATGATATTGATGGTTTTCT
322 CATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCT
*
160704 TTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGAC
387 TTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAC
160769 ATGCATTGATTCTCGTAAAAGTCT
452 ATGCATTGATTCTCGTAAAAGTCT
*
160793 CCATTCTTTTCAAGATTGGGAA-CAAAAACACATTCCCTGCATTAGGATACATGACATTGATGCT
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* * * *
160857 TTGGTGTCACAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAAAT
66 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAT-GATAAAATCAAAGTTTGTCTCTTAAAT
* * *
160922 AAGACAAACATGAATACTCACACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACATCA-T
130 AAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACAT-AGT
* * *
160986 CTTCTCATAAGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATT
194 CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATT
* * * * * *
161051 TTTGTAAAGTATAAGTTCATTCCACAAATTAGACAAACATGGATTCTAGCAAGGATCTTCATTCA
259 TTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
* * *
161116 TTTCGTGATT-GGATACTATAAACACATTCTCCTCATTAGGATAAATGTTATTGACGGTTTTCTT
324 TTTCGTGATTAGG-CACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTT
* * * *
161180 TTGCATGAAAATCTTTTCCTTGCATTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGA-A
388 TTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACA
161244 TGCATTGATTCTCGTAAAAGTCT
453 TGCATTGATTCTCGTAAAAGTCT
* * * * *
161267 CCCTTTTTTTCAAGATTGGGAACCCAAAACTCATTCCCTTCATTAGGATACATGACATTGAAGCT
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* * * * * *
161332 TTGGTGTCACAAGAGAAGCTGTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTTTATTAAGT
66 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA-TGATAAAATCAAAGTTTGTCTCTTAAAT
* * * * * *
161397 AAGACAAACATAAATAGTCATACTAA-CCCACATTCTGTTCTGGATTAGGAACCATAAACATGGT
130 AAGACAAACATGAATACTCATACTAATCCC-CATTCTTTTCAGGATTAGGCACCATAAACATAGT
* ** * * ** *
161461 CTTCTCATAAGGATACATGG-TATTGATTCTTTTGTTTCGTAAGAAACGCTTCCTTCCCGCCAAT
194 CTTCTCATAAGGATA-AAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAAT
* * * * *
161525 TTTTGTAAAGTATAAGTTCACT-CCTCAACTGAGACAAACATGGATT-TAGTAAAGATCTTTATT
258 TTTTGTAAATTCTAAGTTCA-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
* * *
161588 CATTTCATGATTAGGCACTGTAAACACATTCTCCTCATTAGGATAAATCATATTGATGGTTTTCT
322 CATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCT
* * * *
161653 TTTGCATGAAAATCTTTTCTTTGCCTCATTTTCCTTAAAATGAAAGTTTATACTTTAAATGAGAC
387 TTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAC
*
161718 ATGCATTGATTCTCGTAAAAGTCC
452 ATGCATTGATTCTCGTAAAAGTCT
* * * *
161742 CCATTCTTTCCAAGATTAGGATCCAAAAACTCA-TCTCCTTCATTAGGATACATGACATTGATGC
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGC
* * *
161806 TTTGGTGTCGCAAGTGAAGCTTTTTTTTCCACAGTTTATGATAAAATCAAAGTTTGTCTCTTAAA
65 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCG-TTATGATAAAATCAAAGTTTGTCTCTTAAA
* * * * *
161871 TAAGACAAACATGAATACTTATACAAATCCCCATTCTTTTCAAGATTAGGCGCCGTAAACATAGT
129 TAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGT
** * * *
161936 CTTCTCATAAGGATATTGGATATTGATGATTTGGTTTCGCAAGAAACGATTTTTTCCCTCTAATT
194 CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATT
* *
162001 TTTGCAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
259 TTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
* ** * * *
162066 TTTCGTGATTAGGCACTATAAACACAATCTCCTTGTCACGATACATGATATTGATGGTTTTCTTT
324 TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
* *
162131 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAATGATA-AT
389 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAT
* *
162195 GCACTGATGCTCGTAAAAGTCT
454 GCATTGATTCTCGTAAAAGTCT
* * * *
162217 CCACTCTTTTCAAGATTGGGAACCAAAAACTCATTTCCTTCATTAGGATACATGACATTGAAGCT
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* * * *
162282 TCGGTGTCGCAAGAGAAGCTGTTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTTTCTTAAAT
66 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA-TGATAAAATCAAAGTTTGTCTCTTAAAT
* * * * * *
162347 AAGACAAACAAGAATAGTCAAACTAATCCACC-TTCTTTTCTGGATTAGGCACCGTAGACATAGT
130 AAGACAAACATGAATACTCATACTAATCC-CCATTCTTTTCAGGATTAGGCACCATAAACATAGT
* * * *
162411 CTTCTCATAAGGATAAATGATATTGATGCTTTGGTTTGGCAAGAAACGCTTTCTTCCC-CCTAAT
194 CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACC-AAT
* * * * * **
162475 TTTTGTAAAGTATAAGTTCATTCCTCAAATTAGACAAACATGGATTCCAAAAAGGATCTTCATTC
258 TTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTC
162540 ATTTTC-TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCT
323 A-TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCT
* *
162604 TTTG-ATTGAAAATCTTTTTTTCTTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAAT
387 TTTGCA-TGGAAATC---TTTTC-TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAAT
*
162668 GAGACATGCATTGATTCTCATAAAAGTCT
447 GAGACATGCATTGATTCTCGTAAAAGTCT
* * *
162697 CCATTGTTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* *
162762 TTAGTGTCACAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAAT
66 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTT-ATGATAAAATCAAAGTTTGTCTCTTAAAT
*
162827 AAGAC-AACATGAATACTCATACTAGTCCCCATTCCTTTT-AGGATTAGGCACCATAAACATAGT
130 AAGACAAACATGAATACTCATACTAATCCCCATT-CTTTTCAGGATTAGGCACCATAAACATAGT
*
162890 CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACCAATT
194 CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATT
* * * * * *
162955 TTTGTAAATTCTAAGTTCGTGCCTTAAAAGACACAAACGTGGATTCTAGTAAGGATCTGCATTCA
259 TTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
* *
163020 TTTCATGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTGATGGTTTTCTTT
324 TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
* * * *
163085 TGCATGGAAATTTTTTCGTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGATAGAT
389 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAT
163150 GCATTGATTCTCGTAAAAGTCT
454 GCATTGATTCTCGTAAAAGTCT
*
163172 CCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* *
163237 TTGGTGTAGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCACTTAAAT
66 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTT-ATGATAAAATCAAAGTTTGTCTCTTAAAT
*
163302 AAGACAAACATGAATACTCATACTAGTCCCCATTCCTTTT-AGGATTAGGCACCATAAACATAGT
130 AAGACAAACATGAATACTCATACTAATCCCCATT-CTTTTCAGGATTAGGCACCATAAACATAGT
* *
163366 CCTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACCAATT
194 CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATT
* * * ** * * *
163431 TTTGTAAATTCTGAGTTCGTGCCAT-AAAAGCCACAAACGTGGATTCTAGTAATGATCTGCATTC
259 TTTGTAAATTCTAAGTTCATGCC-TCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTC
* *
163495 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTTATGGTTTTCTT
323 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTT
* *
163560 TTGCATGGAAATTTTTTCTTTTTTTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAAT
388 TTGCATGGAAA-----TC-TTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAAT
*
163625 GAGACATGCATTGATTCTCATAAAAGTCT
447 GAGACATGCATTGATTCTCGTAAAAGTCT
* * * *
163654 CCATTGTTTCCAAGATTGGGATCCAAAAACACATTCCCTTCTTTAGGATACATGACATTGATGCT
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
*
163719 TTGGTGTCGCAAGAGAGGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAAT
66 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTT-ATGATAAAATCAAAGTTTGTCTCTTAAAT
* *
163784 AAGACAAACATGAATAGTCATACTAGTCCCCATTCCTTTT-AGGATTAGGCACCATAAACATAGT
130 AAGACAAACATGAATACTCATACTAATCCCCATT-CTTTTCAGGATTAGGCACCATAAACATAGT
* * *
163848 TTTCTCATAAGGACAAAGGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCACCAATT
194 CTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATT
* * * ** * *
163913 TTTGTAAATTCTGAGTTCGTGCCAT-AAAAGCCACAAACGTGGATTCTAGTAAGGATCTGCATTC
259 TTTGTAAATTCTAAGTTCATGCC-TCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTC
* *
163977 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCAATAGGATAAATGATATTTATGGTTTTCTT
323 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTT
* * *
164042 TTGCATGGAAATTTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGACACA
388 TTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACA
* **
164107 AGCATTGATTCTCGTATTAGTCT
453 TGCATTGATTCTCGTAAAAGTCT
* * *
164130 CCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGTATACATGACATTGATGCT
1 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* * * *
164195 TTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATTGATAAAATTAAAATTTGTCTCTTAAAT
66 TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTA-TGATAAAATCAAAGTTTGTCTCTTAAAT
* * ** *
164260 AATACAAACTTGAATACTCATACTTGT-CCCATTCTTTTCAGGATTAGGAACCATAAACATAGTC
130 AAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* * * * * *
164324 TTCTTATATGGATACAGGAT-TTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCA-TAACTT
195 TTCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTT
* * * *
164387 TTGTAAATTCTAAATTCATGCCTCCAATGAGACAAACATGGATTCTAGTAAGGATCTTCATACGT
260 TTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCAT
* * *
164452 ATT-GTGATTAGGCACTATAAACATATTCTCCTTATTAGGATAAATGAAATTGATGGTTTTCTTT
325 -TTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
* * * *
164516 TGCATGGAAATCTTTTCTTCGCCTTATTCTCCATAAAATCAAAGTTTGTACTTTATATGAG--A-
389 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAT
*
164578 -C----ATTCTTGTAAAAGTCT
454 GCATTGATTCTCGTAAAAGTCT
*
164595 CCATTCGTTTT-AAGATTGGGAACCAAAAACACATTCCATTCATTAGGAT
1 CCATTC-TTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGAT
164644 TAGGCACTAT
Statistics
Matches: 6418, Mismatches: 653, Indels: 244
0.88 0.09 0.03
Matches are distributed among these distances:
465 205 0.03
466 56 0.01
467 34 0.01
468 8 0.00
469 4 0.00
470 1 0.00
471 3 0.00
472 6 0.00
473 651 0.10
474 285 0.04
475 1638 0.26
476 1791 0.28
477 23 0.00
478 12 0.00
479 263 0.04
480 152 0.02
481 165 0.03
482 667 0.10
483 196 0.03
484 7 0.00
485 5 0.00
486 88 0.01
487 3 0.00
488 121 0.02
489 34 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (475 bp):
CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATGATAAAATCAAAGTTTGTCTCTTAAATA
AGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCT
TCTCATAAGGATAAAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCCACCAATTTT
TGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATT
TCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTG
CATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGC
ATTGATTCTCGTAAAAGTCT
Found at i:166323 original size:476 final size:475
Alignment explanation
Indices: 164637--166580 Score: 2663
Period size: 476 Copynumber: 4.1 Consensus size: 475
164627 ATTCCATTCA
* * * * * **
164637 TTAGGATTAGGCACTATAAACATAGTCTTCTTATACGGATATAGGATATTGACGATTTGGTTTTT
1 TTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCG
* * * * *
164702 CGAGAAATGCTTTTTTCCCACAATTTTTGTAAATTTTAAGTTCGTGCCTCGAATGAGACAAAGAT
66 CAAGAAATGCTTTTTTCCCACAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACAT
* * *
164767 AGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTCGG
131 GGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* *
164832 ATAAATGACATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCGTTTTTCTTAAAATC
196 ATAAATGACATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATC
164897 AAAGTTTGTACTTTAAATGACACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTTCAAGATTG
261 AAAGTTTGTACTTTAAATGACACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTTCAAGATTG
164962 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
326 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * *
165027 CTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCACTTAAATAAGACAAACGTGAATACT
391 CTTTTCTTTCCACCATTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* *
165092 CATACTAGTCCCCATTCCTT
456 CATACTAATCCCCATTCTTT
* * *
165112 TTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAGGATTTTGATGATTTAGTTTCG
1 TTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCG
* * * ** *
165177 CAAGAAATGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTTAAAAGCCACAAACG
66 CAAGAAATGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACA
* * *
165242 TGGATTCTAGTAAGGATCTGCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCAATAG
130 TGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAG
* * * * *
165307 GATAAATGATATTGATGGTTTTCTTTTGCATGCAAATTTTTTCTTTGCCTTATTTTCCTTAAAAT
195 GATAAATGACATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAAT
* *
165372 CAATGTTTGTACTTTAAATGACACATGCATTAATTCTCGTAAAAGTCTCCACTCTTTTCAAGATT
260 CAAAGTTTGTACTTTAAATGACACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTTCAAGATT
* *
165437 GGGAACCAAAAACACATTCCCTTCATTAGTATACATGACATTGATGCTTTGGTGTCGCAAGAGAG
325 GGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA
* * * * *
165502 GCTTTTCTTTCCAACATTATCGATAAAATTAAAATTTGTCTCTTAAATAATACAAAC-----TAC
390 GCTTTTCTTTCCACCATTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAC
165562 TCATACTAAT-CCCATTCTTT
455 TCATACTAATCCCCATTCTTT
* * *
165582 TCAGGATTAGGCACCATAAACATAGTCTTCTTATATGGATACAGGAT-TTGATGATTTGGTTTCG
1 TTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCG
* * * * *
165646 CAGGAAATGCTTTTTTCCCATAACTTTTGTAAATTCTAAATTCATGCCTCCAATGAGACAAACAT
66 CAAGAAATGCTTTTTTCCCACAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACAT
* * * * *
165711 GGATTC-AGGTAAGGATCTTCATACGTATT-GTGATTAGGCACTATAAACATATGCTCCTTATTA
131 GGATTCTA-GTAAGGATCTTCATTCAT-TTCGTGATTAGGCACTATAAACACATTCTCCTCATTA
* * * * * *
165774 GGATAAATGAAATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTCGCCTTATTCTCCATAAAA
194 GGATAAATGACATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAA
* * * * * *
165839 TCAAAGTTTGTACTTTATATGAGACATGCATTCATTCTTGTAAAAGTGTCCATTCGTTTT-AAGA
259 TCAAAGTTTGTACTTTAAATGACACATGCATTGATTCTCGTAAAAGTCTCCACTC-TTTTCAAGA
* *
165903 TTGGGAACAAAAAACACATTCCATTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG
323 TTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG
* * * * *
165968 AAGCATGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAAT
388 AAGCTTTTCTTTCCACCATTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
*
166033 ACTCATACTAATCCCCTTTCTTT
453 ACTCATACTAATCCCCATTCTTT
* * * * *
166056 TTAGGATTAGGCATCGTAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTTG
1 TTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCG
* * * * * * * *
166121 CAAGATACGCTTTCTTCCCACCTATTTTTGTAAAGTATAAGTTCATTCCTCAAATTAGACAAACA
66 CAAGAAATGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACA
* * * *
166186 TGGATTCTAGTGAGGATCTTCACTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAG
130 TGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAG
* *
166251 GATAAATGACACTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCGTTTTCCTTAAAAT
195 GATAAATGACATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAAT
* * * * *
166316 CAAAGTTTGTACATTAATTGAGACATGCATTGATTCTCGTAAAAGTCTCCATTC-TTTCTAATAT
260 CAAAGTTTGTACTTTAAATGACACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTTC-AAGAT
* * ** * *
166380 TAGGAA-CAAGAACACATTCCCTTTGTTAGGATGCATGACATTGATGCTTTGGTGTCACAAGAGA
324 TGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGA
* * *
166444 AGCTTTTCTTCCCACCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAGCATGAATA
389 AGCTTTTCTTTCCACCATTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
*
166509 CTCATACTAATCCACATTCTTT
454 CTCATACTAATCCCCATTCTTT
* * *
166531 TATA-GATTAGGCACCATAAACATAGTCCTCTAATAAGGATACATGATATT
1 T-TAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATT
166581 AATGCTGTGC
Statistics
Matches: 1293, Mismatches: 159, Indels: 34
0.87 0.11 0.02
Matches are distributed among these distances:
467 1 0.00
468 306 0.24
469 41 0.03
470 52 0.04
471 12 0.01
473 13 0.01
474 53 0.04
475 281 0.22
476 533 0.41
477 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (475 bp):
TTAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCG
CAAGAAATGCTTTTTTCCCACAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACAT
GGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
ATAAATGACATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATC
AAAGTTTGTACTTTAAATGACACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTTCAAGATTG
GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
CTTTTCTTTCCACCATTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
CATACTAATCCCCATTCTTT
Found at i:168163 original size:475 final size:474
Alignment explanation
Indices: 166590--174200 Score: 9848
Period size: 475 Copynumber: 16.1 Consensus size: 474
166580 TAATGCTGTG
* * *
166590 CCTCAAATGAGACAAGCATGGATTCCAGTAAGGATCTT--TTCA--T-G-G-TTAGGTACTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* * * *
166648 ACACATTCTCCTCATCAGAATACATGATATTGATGGTTTTCTTTTGCGTGGAAATCTTTTCTTTG
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
166713 CCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
131 CCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
* * * *
166778 TCCATTCTTTTCATGATTGGGAACCAAAAGCACATTTCCTTCAATAGGATACATGACATTAATGC
196 TCCATTCTTTTCAAGATTGGGAACCAAAAACACA-TTCCTTCATTAGGATACATGACATTGATGC
* * * ** * *
166843 TTTGGTGTCACAACAGAGGCTTTTCTTTCCAATGTTATCGATAAAATCAAAATTTGTCTCTTAAA
260 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAA
* * *
166908 TAAGATAAACTTGAATACTCATACTAATCC-CATTGTTTTCAGGATTAGGCACCATAAACATAGT
325 TAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATAGT
* * * * * * *
166972 CTTCTTATACGGATATAGGATATTGATGATTTGGTTTTGCGAGAAGCGCTTTTTTCC-CACAATT
390 CTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCAC-CAATT
* * *
167036 TTTGTAAATTCTAAGTTCGTG
454 TTTGTAAAGTCTAAGTTCATT
* * * * *
167057 CCTCGAATGAGACAAAGACGGATTCTAGTAAAGATCTTCATTCATTTCATGATTAGGCACTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* * * *
167122 ACACATTCTCCTTATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGCAAATCTTTTTTTTT
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATC----TTTTC
* * *
167187 TTTGCCTTATTTTCCTTAAAATCAGAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAA
127 TTTGCCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
* *
167252 AGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACATTCCCTGCATTAGCATACATGACATTG
192 AGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATT-CCTTCATTAGGATACATGACATTG
* * * * *
167316 ATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATATAATCAAAATTTGTCTCT
256 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCT
*
167381 TAAATAAGACAAACTTGAATACTCATACTAATCC-CATTCTTTTCAGGATTAGGCACCATAAACA
321 TAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACA
* * * * * *
167445 AAGTCTTCTTATACGGATGCATGATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCC-CAA
386 TAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCAC-C
* *
167509 AATTTTTGTAAATTCTAAGTTCATG
450 AATTTTTGTAAAGTCTAAGTTCATT
* *
167534 CCTCAAAAGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCACTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* *
167599 ACACATTCTCCTCATTAGGATACATGATATTGATTGTTTTCTTTTGCATGGAAATCTTTTCTTTG
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* * *
167664 CCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTCATTCTTGTAAAAGTC
131 CCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
* * *
167729 TCCATTCTATTT-AAGATTGGGAACCAAAATCCCATTCTTTCATTAGGATACATGACATTGATGC
196 TCCATTCT-TTTCAAGATTGGGAACCAAAAACACATTCCTTCATTAGGATACATGACATTGATGC
* * * * *
167793 TTTGGTGTCGTAAGAGAAGCTTGTCTTTCCACCGTTATCGATAGAATCAAAATTTGTCTCTTAAA
260 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAA
* * *
167858 TAAGACAAACATGAATACTCACACTAATCCACATTCTTTACTGGATTAGGCACCATAAACATCA-
325 TAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACAT-AG
* * * *
167922 TCTTCTCATAAAGATAAATGATATTCATGCTTTGGTTTCGCAAGAAACGCTTTCTTTCCACCAAT
389 TCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTT-TTTCCACCAAT
*
167987 TTTTGTAAAGTATAAGTTCATT
453 TTTTGTAAAGTCTAAGTTCATT
* * * * *
168009 CCTCAAATTAGACAAACATGGATTATAGCAAGGATCTTCATTCATTTTGTGATTAGACACTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* *
168074 ACACATTCTCCTTATTAGGATAAATTATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* * *
168139 CGATATTTTCCTTAAAATCAAAGTTTGCACTTTAAATGATA-ATGCATTGATTCTCGTAAAAGTC
131 CCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
* * *
168203 TCCACTCTTTTCAAGATTGGGAACCAAAAACTCATTCCCTTCATTAGGATACATGACATTGAAGC
196 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATT-CCTTCATTAGGATACATGACATTGATGC
* * * * *
168268 TTCGGTGTCGCAAGAGAAGCTGTTCTTTCCACGGTTATTGATAGAATCAAAGTTTGTTTCTTAAA
260 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAA
* * * * *
168333 TAAGACAAACATGAATAGTCATACTAATCCACATTCTTTTCTGGATTAGGGACCATAAACTTGGT
325 TAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATAGT
* * * *
168398 CTTCTCATAAGGATACATGATATTGATGCTTTTGTTTCGTAAGAAACGCTTTTTGCCCACCAATT
390 CTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTT-TCCACCAATT
*
168463 TTTGTAAAGTATAAGTTCACTT
454 TTTGTAAAGTCTAAGTTCA-TT
* * * * *
168485 -CTCAAATGAGACAAACATAGATTCTAGTAAAGATCTTCATTCGTTTCCTGATTAGGCTCTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
*
168549 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCCTTG
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* *
168614 CC-TAATTTTCCTTAAAACCAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCTCGTAAAAGT
131 CCAT-ATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGT
* * * * ***
168678 CTCCATTCTTTCCAAGATTAGGATCCAAGAACTTGTTTCCTTCATTAGGATACATGACATTGATG
195 CTCCATTCTTTTCAAGATTGGGAACCAAAAAC-ACATTCCTTCATTAGGATACATGACATTGATG
* *
168743 CTTTGGTGTCGCAAGACAAGCTTTTCTTTCCACCGTTAGTGATAAAATCAAAGTTTTGTCTCTTA
259 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAG-TTTGTCTCTTA
* *
168808 AATAAGACAAACATGGATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
323 AATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATA
* * * *
168873 GTCTTCTCGTAAGGATAC-TAGATATTGATGATTTGGTTTAGCAAGAAACGATTTTTTCCCTCCA
388 GTCTTCTCATAAGGATACAT-GATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTT-CCACCA
* * *
168937 ATTTTTGTAAATTCTAAGTTCGTA
451 ATTTTTGTAAAGTCTAAGTTCATT
* * * * *
168961 CCTCAAATGAGACAAACATAGATTCTAGTAAAGATCTTCATTCGTTTCATGATTAGGCACCATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* *
169026 ACGCATTCTCCTCATTAGGATAAATGATATTGATTGTTTTCTTTTGCATGGAAATCTTTTCTTTG
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* * * *
169091 CCTTATTTTCCTTAAAACCAAAGTTTATACTTTAAATGAGACATGCATTGATTCTCATAAAAGTC
131 CCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
* * * * *
169156 CCCATTCTTTCCAAGATTAGGATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGATGC
196 TCCATTCTTTTCAAGATTGGGAACCAAAAACACA-TTCCTTCATTAGGATACATGACATTGATGC
*
169221 TTTGGTGTCGCAAGAGAAGCTTTTTTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAA
260 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAA
* * *
169286 CAAGACAAACATGGATACTCATACTAATCCCCATTCTTTTTCAGGATTAGGCACCATAAACATAG
325 TAAGACAAACATGAATACTCATACTAATCCACATTC-TTTTCAGGATTAGGCACCATAAACATAG
* * * *
169351 TGTTCTCATAAGGATAC-TGGATATTGATGATTTGGTTTAGCAAGAAACGGTTTTTTCCCTCCAA
389 TCTTCTCATAAGGATACAT-GATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTT-CCACCAA
* *
169415 TTTTTGTAAATTCTAAGTTCATG
452 TTTTTGTAAAGTCTAAGTTCATT
* *
169438 CCTCAAATGAG---ATCATGGATTCTAGTAAGTATCTTCATTCATTTCGTGATTAGGCACTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* * * * * * * *
169500 ACACAATCTCCTCATCACGATACATGATATTGATGGTTTCCTTTTGCATGGAAACCTTTTCCTTC
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* * * * *
169565 CCTTATTTTCCTTAAAATCAAAGTTTGCACTTTAAATGAGACATCCATTGATTCTTGCAAAAGTC
131 CCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
* ** **
169630 TCCATTCGTTTT-AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACACGATGTTGACA
196 TCCATTC-TTTTCAAGATTGGGAACCAAAAACACATT-CCTTCATTAGGATACATGACATTGATG
* * ** * *
169694 CTTTGGTGTCACAAGAGAAGCTTGTCCATCCACCATTATTGATAGAATCAAAGTTTGTCTCTTAA
259 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAA
*
169759 ATAAGACAAACATGAATACTCAATACTAATCCACATTCTTTTCTA-GATTAGGCACCGTAAACAT
324 ATAAGACAAACATGAATACTC-ATACTAATCCACATTCTTTTC-AGGATTAGGCACCATAAACAT
** * * * * *
169823 AGTCTTCTTGTAAGGATAAATGATATTGATGCTTTGGTTTGGCAAGAAACGCTTTCTTCCCCCCA
387 AGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTT-TTTCCACCA
169888 ATTTTTGTAAAGTAC-AAGTTCATT
451 ATTTTTGTAAAGT-CTAAGTTCATT
* * * * *
169912 CCGCAAATTAGACAAACAGGGATTCTAGTAAGGATCTTCATACATTTCGTGATTAGGCACTTTAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
*
169977 ACACATTCTCCTCATTAGGATAAATAATATTGATGGTTTTCTTTTGCAT-GAATATCTTTTCTTT
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAA-ATCTTTTCTTT
** * * *
170041 GCCCCATTTTCCTTAAAATCAAAGTTTGTACATTAAATGAGACATGCATTGATTCTCATGAAAGT
130 GCCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGT
* * *
170106 CTCCATTCTTTCCAAGATTGGGATCCAAAAATACATTCCCTTCATTAGGATACATGACATTGATG
195 CTCCATTCTTTTCAAGATTGGGAACCAAAAACACATT-CCTTCATTAGGATACATGACATTGATG
* * * * * *
170171 CTTTGGTGTCACAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATTAAAATTTGTCTCTTAA
259 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAA
* * * *
170236 ATAAGATAAACTTGAATACTCATACTAATCC-TATTCTTTTCAGGATTAGGTACCATAAACATAG
324 ATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATAG
* * * * *
170300 TCTTCTTATACGGATATAGGATATTGATGATTTGGTTTCGCAGGAAACGCTTTTTTCC-CACAAT
389 TCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCAC-CAAT
* * *
170364 TTTTGTAAATTCTAAGTTCGTA
453 TTTTGTAAAGTCTAAGTTCATT
* * * *
170386 CCTTAAATGAGACAAGCATGGATTCCAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* * * *
170451 ACACATTCTCCTCATTAAGATACATGATATTGATGGTTTTCTTTTGCGTGAAAATCTTTTCTTTG
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
*
170516 CCAAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
131 CCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
*
170581 TCCATTCTTTTCATGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTGATGC
196 TCCATTCTTTTCAAGATTGGGAACCAAAAACACA-TTCCTTCATTAGGATACATGACATTGATGC
* * * * * * *
170646 TTTAGTCTCGCAAGAGAAGCTTTTCTTTACACCGTTATTAATAGAACCAAACTTTGTCTCTTAAA
260 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAA
* ** * *
170711 TAAGACAGAGTTGAATACTCATACTAATCCATATTCGTTTT-TGGATTAGGCACCATAAACATAG
325 TAAGACAAACATGAATACTCATACTAATCCACATTC-TTTTCAGGATTAGGCACCATAAACATAG
* * * * * * * *
170775 TCTTCTAATAACGATACATGATAATGATGCA-TTGGATTCACAGGAAAC-ATTTTGTTCCCCCCA
389 TCTTCTCATAAGGATACATGATATTGATG-ATTTGGTTTCGCAAGAAACGCTTTT-TT-CCACCA
170838 A-TTTT-T---G----AGTTCATT
451 ATTTTTGTAAAGTCTAAGTTCATT
* * * * *
170853 CCTCATATGAGACAGACATGGATTCTAGTAAGGATCTTCTTTCATTTCATGATTAGGCATTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* * *
170918 ACACTTTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCAAGGAAATCTTTTCTTTG
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* *
170983 CC-TCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATGAAAGT
131 CCAT-ATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGT
* * * *
171047 CTCCATTCCTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGGATACACGACATTGATG
195 CTCCATTCTTTTCAAGATTGGGAACCAAAAACACATT-CCTTCATTAGGATACATGACATTGATG
* * * * * *
171112 CTTTGGTGTCACAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTAAA
259 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAA
* * * *
171177 ATAAGATAAACTTGAATACTCATACTAATCC-CATTCTTTTCAAGATTAGGTACCATAAACATAG
324 ATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATAG
* * * * * ** *
171241 CCTTCTTATACGGATATAGGATATTGATGATTTGGTTTTACAGGAAACGCTTTTTTCC-CACAAT
389 TCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCAC-CAAT
* * *
171305 TTTTGTAAATTCTAAGTTCGTA
453 TTTTGTAAAGTCTAAGTTCATT
* * * * *
171327 CCTTAAATGAGACAAGCATGGATTCCAGTATGGATCTTCATTCATTTCATGATTAGGCACTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* * * *
171392 ACACATTCTCCTCATTAAGATACATGATATTGATGGTTTTCTTTTGCGTGAAAATCTTTTCTTTG
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* *
171457 CCAAATTTTCCTTAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
131 CCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
* * * *
171522 TCCATTCTTTTCATGATTGGGAACCAAAAGCACATTTCCTTCATTAGGATACATGATAATGATGC
196 TCCATTCTTTTCAAGATTGGGAACCAAAAACACA-TTCCTTCATTAGGATACATGACATTGATGC
* * * * *
171587 TTTAGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAACCAAA--CTGTCTCTTAAA
260 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAA
* ** *
171650 TAAGACAGAGTTGAATACTCATACTAATCCATATTCGTTTT--GGATTAGGCACCATAAACATAG
325 TAAGACAAACATGAATACTCATACTAATCCACATTC-TTTTCAGGATTAGGCACCATAAACATAG
* * * * * *
171713 TCTTCTAATAAGGATACATGATAATGATGCTTTGGATTCGCAAGAAAC-ATTTTCTTCCCCCCAA
389 TCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTT-TT-CCACCAA
171777 -TTTT-T---G----AGTTCATT
452 TTTTTGTAAAGTCTAAGTTCATT
* * * * * *
171791 CCTCATATGAGACAGACATGGATTCTAGTAAGGATCTTCTTTCATTTCATGATTACGCATTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* **** * *
171856 ACACTTTCTCCTCATTTCTTTCCAATGATATTAATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
66 ACACATTCTCCTCATTAGGAT-AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
* *
171921 GCCACATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAAAGT
130 GCCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGT
* * *
171986 CTCCATTCTTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGGATACATGATATTGATG
195 CTCCATTCTTTTCAAGATTGGGAACCAAAAACACATT-CCTTCATTAGGATACATGACATTGATG
*
172051 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAA
259 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAA
* * *
172116 ATTAA-ACAAAAATGAATACTCAAACTAATCC-CCTTCTTTTCAGGATTAGGCACCATAAACATA
324 A-TAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATA
* * *
172179 GTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTCTCCCACCAG
388 GTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTT-TTCCACCAA
* * * *
172244 TTTTTGTAAATTCTAAATTCGTG
452 TTTTTGTAAAGTCTAAGTTCATT
* *
172267 CCTCAAATGAGACAAACATGGACTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* * * *
172332 ACAAATTCTCCTTAATAGGATAAATGATATTGATGGATTTCTTTTGCATGGAAATCTTTTCTTTG
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* * * *
172397 CCTTGTTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTGTCGTAAAAGTC
131 CCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
* * * * *
172462 TCCATTCTTTTCAAGAATGAGAACCAAAAACACGTTTCTTTCATTAGGATACATGACATTGATAC
196 TCCATTCTTTTCAAGATTGGGAACCAAAAACAC-ATTCCTTCATTAGGATACATGACATTGATGC
* * * * **
172527 TTTGGTCTTGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTCATCTCTTAAA
260 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAA
* **
172592 TAAGACAAACTTGAATACTCATACTAATCCACATTCTTTTTTGGATTAGGCACCATAAACATAGT
325 TAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATAGT
* * * * * *
172657 CTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAAC-ATTTTCTTCCCCCTAA-
390 CTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTT-TTCCACC-AAT
172720 TTTT-T---G----AGTTCATT
453 TTTTGTAAAGTCTAAGTTCATT
* * * * *
172734 CCTCACATGAGACAAACATGGATTCTAGAAAGGATCTTC-TTGCATTTCGTGTTTAGACATTATA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT-CATTTCGTGATTAGGCACTATA
* *
172798 AACACTTTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
65 AACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
* *
172863 GCCACATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAAAGT
130 GCCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGT
* * *
172928 CTCCATTCTTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGGATACATGATATTGATG
195 CTCCATTCTTTTCAAGATTGGGAACCAAAAACACATT-CCTTCATTAGGATACATGACATTGATG
*
172993 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAA
259 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAA
* * *
173058 ATTAA-ACAAAAATGAATACTCAAACTAATCC-CCTTCTTTTCAGGATTAGGCACCATAAACATA
324 A-TAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATA
* * *
173121 GTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTCTCCCACCAG
388 GTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTT-TTCCACCAA
* * *
173186 TTTTTGTAAATTCTAAGTTCGTG
452 TTTTTGTAAAGTCTAAGTTCATT
* *
173209 CCTCAAATGAGACAAACATGGACTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
* * * *
173274 ACAAATTCTCCTTAATAGGATAAATGATATTGATGGATTTCTTTTGCATGGAAATCTTTTCTTTG
66 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* * * * *
173339 CCTTGTTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGACATGCATTAATTGTCGTAAAAGTC
131 CCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
* * * *
173404 TCCATTCTTTTCAAGAATGAGAACCAAAAACACATTTCTTTCATTAGGATACATGACATTGATAC
196 TCCATTCTTTTCAAGATTGGGAACCAAAAACACA-TTCCTTCATTAGGATACATGACATTGATGC
* * * * **
173469 TTTGGTCTTGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTCATCTCTTAAA
260 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAA
* **
173534 TAAGACAAACTTGAATACTCATACTAATCCACATTCTTTTTTGGATTAGGCACCATAAACATAGT
325 TAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATAGT
* * * * * *
173599 CTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAAC-ATTTTCTTCCCCCTAA-
390 CTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTT-TTCCACC-AAT
173662 TTTT-T---G----AGTTCATT
453 TTTTGTAAAGTCTAAGTTCATT
* * * * *
173676 CCTCACATGAGACAAACATGGATTCTAGAAAGGATCTTC-TTGCATTTCGTGTTTAGACATTATA
1 CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT-CATTTCGTGATTAGGCACTATA
* * *
173740 AACACTTTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCATGGACATCTTTTCTTT
65 AACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTT
*
173805 GCC-TCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAAAG
130 GCCAT-ATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
* * * * * * * *
173869 TCTCCACTATTTCCAAGTTTCGGATCCAAAAACACTTTCTCTTCATTAGGATACATGACATTGAC
194 TCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTC-CTTCATTAGGATACATGACATTGAT
* * * *
173934 GGTTTGGTGTCACAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTATCTCTTA
258 GCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTA
* * *
173999 AATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGACACCATAAACATA
323 AATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATA
* * * * * *
174064 GTCTTCTCATAAGGATGCATGATATTGATGCTTTGGATTCACAAGATACGCTTTCTTCCACCAAT
388 GTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCACCAAT
* * *
174129 TTGTGTAAAGTATGAGTTCATT
453 TTTTGTAAAGTCTAAGTTCATT
* *
174151 GCTCAAATGAGACAAACATGGATTCTTA-TAGGGATCTTCATTCATTTCGT
1 CCTCAAATGAGACAAACATGGATTC-TAGTAAGGATCTTCATTCATTTCGT
174201 ATGAGTATAC
Statistics
Matches: 6261, Mismatches: 751, Indels: 256
0.86 0.10 0.04
Matches are distributed among these distances:
464 81 0.01
465 218 0.03
466 158 0.03
467 1180 0.19
468 21 0.00
469 5 0.00
471 7 0.00
472 100 0.02
473 220 0.04
474 1216 0.19
475 1348 0.22
476 437 0.07
477 1175 0.19
478 95 0.02
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (474 bp):
CCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAA
ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
CCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC
TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTCATTAGGATACATGACATTGATGCT
TTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAAT
AAGACAAACATGAATACTCATACTAATCCACATTCTTTTCAGGATTAGGCACCATAAACATAGTC
TTCTCATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACGCTTTTTTCCACCAATTTT
TGTAAAGTCTAAGTTCATT
Found at i:168569 original size:158 final size:155
Alignment explanation
Indices: 166944--183301 Score: 1635
Period size: 159 Copynumber: 103.7 Consensus size: 155
166934 ATCCCATTGT
* * * * * * * *
166944 TTTCAGGATTAGGCACCATAAACATAGTCTTCTTA-TACGGATATAGGATATTGATGATTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTA-GGATACATGATATTGATGCTTTGGTT
* * * * * * * *
167008 TTGCGAGAAGCGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTC-GTGCCTCGAATGAGACA
65 TCGCAAGAA-AGCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGACA
* ** * *
167071 AAGACGGATTCTAGTAAAGATCTTCATTCA
127 AACATAGATTCTAGTAAA-ATCTCCATTCG
* * * * **
167101 TTTCATGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* ** * **** * * *
167166 TGCTTGCAAATCTTTTTTTTTTTTGCCTTATTTTCCT-TAAAATCAGAGTTTGTACTT-T-AAAT
66 CGCAAG-AAAGC---TTTTTTCCCACC-AATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAAT
** * *
167228 GAGACATGCATTGATTCTCA-TAAAAGTCTCCATTCT
121 GAGACAAACATAGATTCT-AGTAAAA-TCTCCATTCG
* * * * * *
167264 TTTCAAGATTGGGAACCA-AAACACATTC-CCTGCATTAGCATACATGACATTGATGCTTTGGTG
1 TTTCATGATTAGGCACCATAAACACATTCTCCT-CATTAGGATACATGATATTGATGCTTTGGTT
* * * * * * * * ** * *
167327 TCGCAAGAGAGGCTTTTCTTTCCAAC-GTTATCGATATAATCAAAATT-TGTCTCTTAAATAAGA
65 TCGCAAGA-AAGCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGAGA
* * * *
167390 CAAAC-TTGAATACTCA-TACTAATC-CCATTCT
125 CAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* * * * * * *
167421 TTTCAGGATTAGGCACCATAAACAAAGTCTTCTTA-TACGGATGCATGATATTGATGATTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTA-GGATACATGATATTGATGCTTTGGTT
* * * * *
167485 TCGCAAGAAATGCTTTTTTCCCA-AAATTTTTGTAAATTCTAAGTTCA-TGCCTCAAAAGAGACA
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGACA
* * *
167548 AACATGGATTCTAGTAAAGATCTTCATTCA
127 AACATAGATTCTAGTAAA-ATCTCCATTCG
* * **
167578 TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATTG-TTTTCTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGA-TGCTTTGGTT
* * * ** ** *
167642 TTGCATGGAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGTTTGTACTT-T-AAATGA
65 TCGCA-AGAAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
** ** *
167703 GACATGCATTCATTCTTGTAAAAGTCTCCATTC-
123 GACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * * *
167736 TATTTAAGATTGGGAACCA-AAATCCCATTCT-TTCATTAGGATACATGACATTGATGCTTTGGT
1 T-TTCATGATTAGGCACCATAAA-CACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGT
* * * * * * * ** * *
167799 GTCGTAAGAGAAGCTTGTCTTT-CCACC-GTTATCGATAGAATCAAAATT-TGTCTCTTAAATAA
64 TTCGCAAGA-AAGCTT-T-TTTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGA
* * *
167861 GACAAACAT-GAATACTCA-CACTAATC-CACATTC-
123 GACAAACATAG-ATTCT-AGTA-AAATCTC-CATTCG
* * * * *
167894 TTT-ACTGGATTAGGCACCATAAACATCA-TCTTCTCATAAAGATAAATGATATTCATGCTTTGG
1 TTTCA-T-GATTAGGCACCATAAACA-CATTCTCCTCATTAGGATACATGATATTGATGCTTTGG
* *
167957 TTTCGCAAGAAACGCTTTCTTT-CCACCAATTTTTGTAAAGTATAAGTTCA-TTCCTCAAATTAG
63 TTTCGCAAGAAA-GCTTT-TTTCCCACCAATTTTTGTAAAATA-AAGTTCACTT-CTCAAATGAG
* * * * * *
168020 ACAAACATGGATTATAGCAAGGATCTTCATTCA
124 ACAAACATAGATTCTAGTAA-AATCTCCATTCG
** * * * * * * **
168053 TTTTGTGATTAGACACTATAAACACATTCTCCTTATTAGGATAAATTATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * * *
168118 TGCATGGAAATCTTTTCTTTGCGA--TATTTTCCT-TAAAATCAAAGTTTGCACTT-T-AAATGA
66 CGCA-AGAAAGC-TTT-TTTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
* ** * * * *
168178 TA-ATGCATTGATTCTCGTAAAAGTCTCCACTCT
123 GACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * * * * *
168211 TTTCAAGATTGGGAACCAAAAACTCATTC-CCTTCATTAGGATACATGACATTGAAGCTTCGGTG
1 TTTCATGATTAGGCACCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGGTT
** * * *** * *
168275 TCGCAAGAGAAGCTGTTCTTT-CCA-CGGTTATTGATAGAATCAAAGTTTGTTTCTTAAATAAGA
65 TCGCAAGA-AAGCT-TT-TTTCCCACCAATTTTTG-TAAAAT-AAAGTTCACTTCTCAAATGAGA
* *
168338 CAAACAT-GAATAGTC-A-TACTAATC-CACATTCT
125 CAAACATAG-AT--TCTAGTA-AAATCTC-CATTCG
* **** * * *
168370 TTTC-TGGATTAGGGACCATAAACTTGGTCTTCTCATAAGGATACATGATATTGATGCTTTTGTT
1 TTTCAT-GATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTT
* * *
168434 TCGTAAGAAACGCTTTTTGCCCACCAATTTTTGTAAAGTATAAGTTCACTTCTCAAATGAGACAA
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAATA-AAGTTCACTTCTCAAATGAGACAA
*
168499 ACATAGATTCTAGTAAAGATCTTCATTCG
128 ACATAGATTCTAGTAAA-ATCTCCATTCG
* * * * * **
168528 TTTCCTGATTAGGCTCTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * * * * *
168593 TGCATGGAAATCTTTTCCTT-GC-CTAATTTTCCT-TAAAACCAAAGTTTGTACTT-T-AAAAGA
66 CGCA-AGAAAGCTTTT--TTCCCACCAATTTT--TGTAAAA-TAAAG-TT-CACTTCTCAAATGA
** * *
168653 GACATGCATTGATTCTCGTAAAAGTCTCCATTC-
123 GACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * *
168686 TTTCCAAGATTAGG-ATCCA-AGA-ACTTGTTTCCTTCATTAGGATACATGACATTGATGCTTTG
1 TTT-CATGATTAGGCA-CCATAAACACAT-TCTCC-TCATTAGGATACATGATATTGATGCTTTG
* * * ** *** * *
168748 GTGTCGCAAGACAAGCTTTTCTTTCCACC-GTTAGTGATAAAATCAAAGTTTTGTCTCTTAAATA
62 GTTTCGCAAGA-AAGCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATG
* * * * *
168812 AGACAAACATGGATACTCA-TACTAATCCCCATTCT
122 AGACAAACATAGATTCT-AGTA-AAATCTCCATTCG
* * * * * * *
168847 TTTCAGGATTAGGCACCATAAACATAGTCTTCTCGTAAGGATAC-TAGATATTGATGATTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACAT-GATATTGATGCTTTGGTT
* * * * *
168911 TAGCAAGAAACGATTTTTTCCCTCCAATTTTTGTAAATTCTAAGTTCGTAC--CTCAAATGAGAC
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTC--ACTTCTCAAATGAGAC
*
168974 AAACATAGATTCTAGTAAAGATCTTCATTCG
126 AAACATAGATTCTAGTAAA-ATCTCCATTCG
* * **
169005 TTTCATGATTAGGCACCATAAACGCATTCTCCTCATTAGGATAAATGATATTGATTG-TTTTCTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGA-TGCTTTGGTT
* * * ** ** * *
169069 TTGCATGGAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAACCAAAGTTTATACTT-T-AAATGA
65 TCGCA-AGAAAGCTTTT-TTCCCACCAATTTT--TGTAAAA-TAAAG-TT-CACTTCTCAAATGA
** * *
169130 GACATGCATTGATTCTCA-TAAAAGTCCCCATTC-
123 GACAAACATAGATTCT-AGTAAAA-TCTCCATTCG
* * * *
169163 TTTCCAAGATTAGG-ATCCAAAAACTCATT-TCCTTCATTAGGATACATGACATTGATGCTTTGG
1 TTT-CATGATTAGGCA-CCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGG
* * * * ** * **
169226 TGTCGCAAGAGAAGCTTTTTTTTCCACC-GTTATTGATAAAATCAAAGTT-TGTCTCTTAAACAA
63 TTTCGCAAGA-AAGC-TTTTTTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGA
* * * * *
169289 GACAAACATGGATACTCA-TACTAATCCCCATTCTT
123 GACAAACATAGATTCT-AGTA-AAATCTCCATTC-G
* * * * * * *
169324 TTTCAGGATTAGGCACCATAAACATAGTGTTCTCATAAGGATAC-TGGATATTGATGATTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACAT-GATATTGATGCTTTGGTT
* * * * * *
169388 TAGCAAGAAACGGTTTTTTCCCTCCAATTTTTGTAAATTCTAAGTTCA-TGCCTCAAATGAG---
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGACA
* * * * *
169449 ATCATGGATTCTAGTAAGTATCTTCATTCA
127 AACATAGATTCTAGTAA-AATCTCCATTCG
* * * * * * **
169479 TTTCGTGATTAGGCACTATAAACACAATCTCCTCATCACGATACATGATATTGATGGTTTCCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * **
169544 TGCATGGAAACCTTTTCCTT-CC-CTTATTTTCCT-TAAAATCAAAGTTTGCACTT-T-AAATGA
66 CGCA-AGAAAGCTTTT--TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
** * * *
169604 GACATCCATTGATTCTTGCAAAAGTCTCCATTCG
123 GACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * * * ** *
169638 TTTTAAGATTGGGAACCAAAAACACATTC-CCTTCATTAGGATACACGATGTTGACACTTTGGTG
1 TTTCATGATTAGGCACCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGGTT
* * * * * ** * *
169702 TCACAAGAGAAGC-TTGTCCATCCACC-ATTATTGATAGAATCAAAGTT-TGTCTCTTAAATAAG
65 TCGCAAGA-AAGCTTTTTTC--CCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGAG
* * * *
169764 ACAAACAT-GAATACTCAATACTAATC-CACATTCT
124 ACAAACATAG-ATTCT-AGTA-AAATCTC-CATTCG
* * * * ** * *
169798 TTTC-TAGATTAGGCACCGTAAACATAGTCTTCTTGTAAGGATAAATGATATTGATGCTTTGGTT
1 TTTCAT-GATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * * * *
169862 TGGCAAGAAACGCTTTCTTCCCCCCAATTTTTGTAAAGTACAAGTTCA-TTCCGCAAATTAGACA
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAATA-AAGTTCACTT-CTCAAATGAGACA
** * * * *
169926 AACAGGGATTCTAGTAAGGATCTTCATACA
127 AACATAGATTCTAGTAA-AATCTCCATTCG
* ** * * * **
169956 TTTCGTGATTAGGCACTTTAAACACATTCTCCTCATTAGGATAAATAATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * * *
170021 TGCATGAATATCTTTTCTTTGCC-CC-ATTTTCCT-TAAAATCAAAGTTTGTACAT-T-AAATGA
66 CGCAAGAA-AGC-TTT-TTTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
** * *
170081 GACATGCATTGATTCTCA-TGAAAGTCTCCATTC-
123 GACAAACATAGATTCT-AGT-AAAATCTCCATTCG
* * * * *
170114 TTTCCAAGATT-GGGATCCAAAAATACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGG
1 TTT-CATGATTAGGCA-CCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGG
* * * * * * * * * ** * *
170177 TGTCACAAGAGAGGCTTTTCTTTCCAAC-GTTATCGATAAAATTAAAATT-TGTCTCTTAAATAA
63 TTTCGCAAGA-AAGCTTTT-TTCCCACCAATTTTTG-TAAAA-TAAAGTTCACT-TCTCAAATGA
* * * * * *
170240 GATAAAC-TTGAATACTCA-TACTAATC-CTATTCT
123 GACAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* * * * * * * * *
170273 TTTCAGGATTAGGTACCATAAACATAGTCTTCTTA-TACGGATATAGGATATTGATGATTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTA-GGATACATGATATTGATGCTTTGGTT
* * * *
170337 TCGCAGGAAACGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTCGTAC--CTTAAATGAGAC
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTC--ACTTCTCAAATGAGAC
* * * * * *
170399 AAGCATGGATTCCAGTAAGGATCTTCATTCA
126 AAACATAGATTCTAGTAA-AATCTCCATTCG
* * * **
170430 TTTCATGATTAGGCACTATAAACACATTCTCCTCATTAAGATACATGATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* ** * * *
170495 TGCGTGAAAATCTTTTCTTTGCCA--AATTTTCCT-TAAAATCAAAGTTTGTACTT-T-AAATGA
66 CGCAAG-AAAGC-TTT-TTTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
** * * *
170555 GACATGCATTGATTCTCGTAAAAGTCTCCATTCT
123 GACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * *
170589 TTTCATGATTGGGAACCAAAAACACATT-TCCTTCATTAGGATACATGACATTGATGCTTTAGTC
1 TTTCATGATTAGGCACCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGGTT
** * ** ** * ** * *
170653 TCGCAAGAGAAGCTTTTCTTTACACC-GTTATTAATAGAACCAAACTT-TGTCTCTTAAATAAGA
65 TCGCAAGA-AAGCTTTT-TTCCCACCAATT-TTTGTA-AAATAAAGTTCACT-TCTCAAATGAGA
* * * * * *
170716 CAGA-GTTGAATACTCA-TACTAATC-CATATTCG
125 CAAACATAG-ATTCT-AGTA-AAATCTC-CATTCG
* * * * * * * * * *
170748 TTT-TTGGATTAGGCACCATAAACATAGTCTTCTAATAACGATACATGATAATGATGCATTGGAT
1 TTTCAT-GATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * *
170812 TCACAGGAAA-CATTTTGTTCCCCCCAATTTTTG--------AGTTCA-TTCCTCATATGAGACA
65 TCGCAAGAAAGC-TTTT-TTCCCACCAATTTTTGTAAAATAAAGTTCACTT-CTCAAATGAGACA
* * * * * *
170867 GACATGGATTCTAGTAAGGATCTTCTTTCA
127 AACATAGATTCTAGTAA-AATCTCCATTCG
** * * * * **
170897 TTTCATGATTAGGCATTATAAACACTTTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * *
170962 TGCAAGGAAATCTTTTCTTTGCC-TC-ATTTTCCT-TAAAATCAAAGTTTGTACTT-T-AAATGA
66 CGCAA-GAAAGC-TTT-TTTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
** * * *
171022 GACATGCATTGATTCTCA-TGAAAGTCTCCATTCC
123 GACAAACATAGATTCT-AGT-AAAATCTCCATTCG
* * * * * *
171056 TTCCAAGATT-GGGATCCAAAAACACATTC-CCTTCATTAGGATACACGACATTGATGCTTTGGT
1 TTTCATGATTAGGCA-CCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGGT
* * * * * * * * * ** * *
171119 GTCACAAGAGAGGCTTTTCTTTCCAAC-GTTATCGATAAAATCAAAATT-TGTCTCTAAAATAAG
64 TTCGCAAGA-AAGCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGAG
* * * * *
171182 ATAAAC-TTGAATACTCA-TACTAATC-CCATTCT
124 ACAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* * * ** * * * * *
171214 TTTCAAGATTAGGTACCATAAACATAGCCTTCTTA-TACGGATATAGGATATTGATGATTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTA-GGATACATGATATTGATGCTTTGGTT
** * * * *
171278 TTACAGGAAACGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTCGTAC--CTTAAATGAGAC
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTC--ACTTCTCAAATGAGAC
* * * ** * *
171340 AAGCATGGATTCCAGTATGGATCTTCATTCA
126 AAACATAGATTCTAGTA-AAATCTCCATTCG
* * * **
171371 TTTCATGATTAGGCACTATAAACACATTCTCCTCATTAAGATACATGATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* ** * *
171436 TGCGTGAAAATCTTTTCTTTGCCA--AATTTTCCT-TAAAATCAAAGTTTGCACTT-T-AAATGA
66 CGCAAG-AAAGC-TTT-TTTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
** * * *
171496 GACATGCATTGATTCTCGTAAAAGTCTCCATTCT
123 GACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * *
171530 TTTCATGATTGGGAACCA-AAAGCACATT-TCCTTCATTAGGATACATGATAATGATGCTTTAGT
1 TTTCATGATTAGGCACCATAAA-CACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGGT
* * * ** ** * * *
171593 GTCGCAAGAGAAGCTTTTCTTTCCACC-GTTATTAATAGAACCAAACTGT--C-TCTTAAATAAG
64 TTCGCAAGA-AAGCTTTT-TTCCCACCAATT-TTTGTA-AAATAAAGT-TCACTTCTCAAATGAG
* * * * * *
171654 ACAGA-GTTGAATACTCA-TACTAATC-CATATTCG
124 ACAAACATAG-ATTCT-AGTA-AAATCTC-CATTCG
* * * * * * *
171687 TTT--TGGATTAGGCACCATAAACATAGTCTTCTAATAAGGATACATGATAATGATGCTTTGGAT
1 TTTCAT-GATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTT
* *
171750 TCGCAAGAAA-CATTTTCTTCCCCCCAATTTTTG--------AGTTCA-TTCCTCATATGAGACA
65 TCGCAAGAAAGC-TTTT-TTCCCACCAATTTTTGTAAAATAAAGTTCACTT-CTCAAATGAGACA
* * * * * *
171805 GACATGGATTCTAGTAAGGATCTTCTTTCA
127 AACATAGATTCTAGTAA-AATCTCCATTCG
* ** * **** * * * **
171835 TTTCATGATTACGCATTATAAACACTTTCTCCTCATTTCTTTCCAATGATATTAATGGTTTTCTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAC-ATGATATTGATGCTTTGGTT
* * * * *
171900 TTGCATGGAAATCTTTTCTTTGCCA-C-ATTTTCCT-TAAAATCAAAGTTTGTACTT-T-AAATG
65 TCGCA-AGAAAGC-TTT-TTTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATG
** *
171960 AGACATGCATTGATTCTCA-TAAAAGTCTCCATTC-
122 AGACAAACATAGATTCT-AGTAAAA-TCTCCATTCG
* * *
171994 TTTCCAAGATT-GGGATCCAAAAACACATTC-CCTTCATTAGGATACATGATATTGATGCTTTGG
1 TTT-CATGATTAGGCA-CCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGG
* * * ** ** * *
172057 TGTCGCAAGAGAAGCTTTTCTTTCCACC-GTTAATGATAAAATCAAAGTT-TGTCTCTTAAATTA
63 TTTCGCAAGA-AAGCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGA
* * * * *
172120 AACAAAAAT-GAATACTCA--AACTAATC-CCCTTCT
123 GACAAACATAG-ATTCT-AGTAA--AATCTCCATTCG
* * * * * * *
172153 TTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * *
172218 CGCAAGAAACGCTTTTCTCCCACCAGTTTTTGTAAATTCTAAA-TTC-GTGCCTCAAATGAGACA
66 CGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAA--ATAAAGTTCACT-TCTCAAATGAGACA
* * * * *
172281 AACATGGACTCTAGTAAGGATCTGCATTCA
127 AACATAGATTCTAGTAA-AATCTCCATTCG
* * * * * * * *
172311 TTTCGTGATTAGGCACTATAAACAAATTCTCCTTAATAGGATAAATGATATTGATGGATTT-CTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGAT-GCTTTGGTT
* * * ** *** * *
172375 TTGCATGGAAATCTTTTCTTTGC-CTTGTTTTCCT-TAAAATCAAAGTTTGTA-TT-TTAAATGA
65 TCGCA-AGAAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
** * * * *
172436 GACATGCATTGATTGTCGTAAAAGTCTCCATTCT
123 GACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * * * *
172470 TTTCAAGAAT-GAGAACCAAAAACACGTT-TCTTTCATTAGGATACATGACATTGATACTTTGGT
1 TTTCATGATTAG-GCACCATAAACACATTCTC-CTCATTAGGATACATGATATTGATGCTTTGGT
* * ** * * *
172533 CTT-GCAAGAGAAGCTTTTCTTTCCACC-GTTATTAATAGAATCAAAGTTCA-TCTCTTAAATAA
64 -TTCGCAAGA-AAGCTTTT-TTCCCACCAATT-TTTGTAAAAT-AAAGTTCACT-TCTCAAATGA
* * *
172595 GACAAAC-TTGAATACTCA-TACTAATC-CACATTC-
123 GACAAACATAG-ATTCT-AGTA-AAATCTC-CATTCG
** * * * * * * *
172628 TTTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATATATGATAATGATGCTTTGGAT
1 TTTCAT-GATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTT
*
172693 TCGCAAGAAA-CATTTTCTTCCC-CCTAATTTTTG--------AGTTCA-TTCCTCACATGAGAC
65 TCGCAAGAAAGC-TTTT-TTCCCACC-AATTTTTGTAAAATAAAGTTCACTT-CTCAAATGAGAC
* * *
172747 AAACATGGATTCTAG-AAAGGATCTTC-TTGCA
126 AAACATAGATTCTAGTAAA--ATCTCCATT-CG
* * * ** * * * * **
172778 TTTCGTGTTTAGACATTATAAACACTTTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * *
172843 TGCATGGAAATCTTTTCTTTGCCA-C-ATTTTCCT-TAAAATCAAAGTTTGTACTT-T-AAATGA
66 CGCA-AGAAAGC-TTT-TTTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
** *
172903 GACATGCATTGATTCTCA-TAAAAGTCTCCATTC-
123 GACAAACATAGATTCT-AGTAAAA-TCTCCATTCG
* * *
172936 TTTCCAAGATT-GGGATCCAAAAACACATTC-CCTTCATTAGGATACATGATATTGATGCTTTGG
1 TTT-CATGATTAGGCA-CCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGG
* * * ** ** * *
172999 TGTCGCAAGAGAAGCTTTTCTTTCCACC-GTTAATGATAAAATCAAAGTT-TGTCTCTTAAATTA
63 TTTCGCAAGA-AAGCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGA
* * * * *
173062 AACAAAAAT-GAATACTCA--AACTAATC-CCCTTCT
123 GACAAACATAG-ATTCT-AGTAA--AATCTCCATTCG
* * * * * * *
173095 TTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * * *
173160 CGCAAGAAACGCTTTTCTCCCACCAGTTTTTGTAAATTCTAAGTTC-GTGCCTCAAATGAGACAA
66 CGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGACAA
* * * * *
173224 ACATGGACTCTAGTAAGGATCTGCATTCA
128 ACATAGATTCTAGTAA-AATCTCCATTCG
* * * * * * * *
173253 TTTCGTGATTAGGCACTATAAACAAATTCTCCTTAATAGGATAAATGATATTGATGGATTT-CTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGAT-GCTTTGGTT
* * * ** *** * *
173317 TTGCATGGAAATCTTTTCTTTGC-CTTGTTTTCCT-TAAAATCAAAGTTTGTA-TT-TTAAATGA
65 TCGCA-AGAAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
** * * *
173378 GACATGCATTA-ATTGTCGTAAAAGTCTCCATTCT
123 GACAAACA-TAGATTCTAGTAAAA-TCTCCATTCG
* * * * * * *
173412 TTTCAAGAAT-GAGAACCAAAAACACATT-TCTTTCATTAGGATACATGACATTGATACTTTGGT
1 TTTCATGATTAG-GCACCATAAACACATTCTC-CTCATTAGGATACATGATATTGATGCTTTGGT
* * ** * * *
173475 CTT-GCAAGAGAAGCTTTTCTTTCCACC-GTTATTAATAGAATCAAAGTTCA-TCTCTTAAATAA
64 -TTCGCAAGA-AAGCTTTT-TTCCCACCAATT-TTTGTAAAAT-AAAGTTCACT-TCTCAAATGA
* * *
173537 GACAAAC-TTGAATACTCA-TACTAATC-CACATTC-
123 GACAAACATAG-ATTCT-AGTA-AAATCTC-CATTCG
** * * * * * * *
173570 TTTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATATATGATAATGATGCTTTGGAT
1 TTTCAT-GATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTT
*
173635 TCGCAAGAAA-CATTTTCTTCCC-CCTAATTTTTG--------AGTTCA-TTCCTCACATGAGAC
65 TCGCAAGAAAGC-TTTT-TTCCCACC-AATTTTTGTAAAATAAAGTTCACTT-CTCAAATGAGAC
* * *
173689 AAACATGGATTCTAG-AAAGGATCTTC-TTGCA
126 AAACATAGATTCTAGTAAA--ATCTCCATT-CG
* * * ** * * * * **
173720 TTTCGTGTTTAGACATTATAAACACTTTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * * * *
173785 TGCATGGACATCTTTTCTTTGCC-TC-ATTTTCCT-TAAAATCAAAGTTTGTACTT-T-AAATGA
66 CGCA-AGAAAGC-TTT-TTTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
** * * *
173845 GACATGCATTGATTCTCA-TAAAAGTCTCCACT-A
123 GACAAACATAGATTCT-AGTAAAA-TCTCCATTCG
* * * * * * * * *
173878 TTTCCAAGTTTCGG-ATCCAAAAACACTTTCTCTTCATTAGGATACATGACATTGACGGTTTGGT
1 TTT-CATGATTAGGCA-CCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGT
* * * * ** * * *
173942 GTCACAAGAGAAGCTTTTCTTTCCACC-GTTAATGATAAAATCAAAGTTTA-TCTCTTAAATAAG
64 TTCGCAAGA-AAGCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGAG
* * * *
174005 ACAAACAT-GAATACTCA-TACTAATCCCCATTCT
124 ACAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* * * * * * * *
174038 TTTCAAGATTAGACACCATAAACATAGTCTTCTCATAAGGATGCATGATATTGATGCTTTGGATT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * * *
174103 CACAAGATACGCTTTCTT-CCACCAATTTGTGTAAAGTATGAGTTCA-TTGCTCAAATGAGACAA
66 CGCAAGA-AAGCTTTTTTCCCACCAATTTTTGTAAAATA-AAGTTCACTT-CTCAAATGAGACAA
* ** * *
174166 ACATGGATTCTTA-TAGGGATCTTCATTCA
128 ACATAGATTC-TAGTA-AAATCTCCATTCG
* * * * * * * *
174195 TTTCGTATGAGTA--TA-CAT---GACATTGATGCT--TT-GGTGTCACA--AGAGT-A-GCTTT
1 TTTC--ATGATTAGGCACCATAAACACATT-CTCCTCATTAGG-AT-ACATGATATTGATGCTTT
** * * **** * * *
174247 TTTTTC-CACCGTTAAAGATAAAAT--CA--AAGTTTGTCTCTTAAAT-AAG---A---C-AAAC
61 GGTTTCGCA-AG--AAAGCTTTTTTCCCACCAA-TTT-T-TGTAAAATAAAGTTCACTTCTCAA-
* * * *
174299 ATG-GATAATCAT--A--C---T--AATCCCCATTCT
119 ATGAGACAAACATAGATTCTAGTAAAATCTCCATTCG
* * * * * * * *
174326 TTTTAGGATTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATAGTGATGCTTTGGTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * *
174391 CGCAAGAAACACTTTCTTCCCACCAATTTTTG-AAAATTCTAAA-TTC-GTGCCTCAAATGAGAC
66 CGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAA---TAAAGTTCACT-TCTCAAATGAGAC
* * ** * *
174453 AAACATGGATTCTTGTAGGGATCTTCATTCA
126 AAACATAGATTCTAGTA-AAATCTCCATTCG
* * * * * *
174484 TTTCGTGATTAGGCACTATAAACACATTCTGCTCTTTAGGATAAATGATATTGATGGCTTT-CTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGAT-GCTTTGGTT
* * * *
174548 TTGCATGGAAATCTTTTCATT---ACCTTATTTTCCT-TAAAATCAAAGTTCGTACTT-T-AAAT
65 TCGCA-AGAAAGCTTTT--TTCCCACC-AATTTT--TGTAAAAT-AAAGTTC--ACTTCTCAAAT
* ** * * * **
174607 AAGACATGCATTGATTCTCGTAAAAGCCTCCATTTT
121 GAGACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * ** * * **
174643 TTTCAAGATTGGGAACCAAAAACACATT-TCCTTCATTAGGATACATGGCATTCAAGCTTTGGCG
1 TTTCATGATTAGGCACCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGGTT
* * * * * * ** * *
174707 TCGCAAGAGAGGCGTTTCTTT-TCAAC-GTTATTGATAAAATCAAAATTTGTCTCCT-AAATAAG
65 TCGCAAGA-AAGC-TTT-TTTCCCACCAATTTTTG-TAAAAT--AAAGTTCACTTCTCAAATGAG
* * * * *
174769 ATAAAC-TTGAATACTCA-TACTAA--TCCATTCT
124 ACAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* * * ** * * * *
174800 TTTCAGGATCAGGCACCAT-AA-ACATTGTTTTCTTATACGGATATAGGATATTGATGATTTGGT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCAT-TA-GGATACATGATATTGATGCTTTGGT
* * * * * * * * *
174863 TTGGCGAGAAATGCTTTTTTCCCA-AAATTTTTCTAAATTCTAAGTTC-GTGCCTCAAATGAGAT
64 TTCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGAC
* * **
174926 AAACATGGATTCTAGTAAAGATCTTCATTTA
126 AAACATAGATTCTAGTAAA-ATCTCCATTCG
* ** * * **
174957 TTTCGTGATTAGGCACTTTAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTATTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* ** * * ** * * *
175022 TGCTTGGAAATCTATTCTTT---GCCTTTTTTTCCTTAAAATCAAAGTTTGTAC-T-TCAAATAA
66 CGC-AAGAAAGCT-TT-TTTCCCACCAATTTTT--GTAAAAT-AAAG-TT-CACTTCTCAAATGA
** * * *
175082 GACATGCATTGATTCTCGTAAAAGTCTCCATTCT
123 GACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * *
175116 TTTCAAGA-TAGGAACCA-AAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTG
1 TTTCATGATTAGGCACCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGGTT
* * * * * * ** * *
175178 TCGCAAGAGAGGCTTTTCTTTCCACC-GTTATCGATAAAATCAAAATT-TGTCTCTTAAATAAGA
65 TCGCAAGA-AAGCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGAGA
* * * *
175241 CAAAC-TTGAATACTCA-TACTAATC-CCATTCT
125 CAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* * * * * * * * *
175272 TTTCAGGATTAGGCTCCATAAACAAAGTCTTCTTA-TACGGATGCAGGATATTGATGATTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTA-GGATACATGATATTGATGCTTTGGTT
* * * ** *
175336 TCGCAAG-AAGCACTTTTTCCC-CACAATTTTTGTAAATTCTAAGTT-TGTGCCTCAAAT--GAC
65 TCGCAAGAAAGC-TTTTTTCCCAC-CAATTTTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGAC
* ** *
175396 AAACATGGATTCTAGTAAAGATCTTAATTCA
126 AAACATAGATTCTAGTAAA-ATCTCCATTCG
* * * * * * *
175427 TTTCGTTATTAGGCACTATAAACACATTCTCCCCACTACGATACATGATATTGATGGCTTT-CTC
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGAT-GCTTTGGT-
* * *** ** *
175491 TT-GCATGGAAATCTTTTCTT-TGTCTTATTTTCCT-TAAAATCAAAGTTTGTACTT-T-AAATG
64 TTCGCA-AGAAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATG
** * * * *
175551 AGACATGCATTGATTATCGTAAAAGTCTCCATTCT
122 AGACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * * * * *
175586 TTTCAAGATTCGGAACCAAAAACACAATC-CCTGTATTAGGATACATGACATTCATGCTTTGGTG
1 TTTCATGATTAGGCACCATAAACACATTCTCCT-CATTAGGATACATGATATTGATGCTTTGGTT
* * * * ** * * * * *
175650 TCGCAAGAGAGGCTTTTCTTTCCAAC-GTTATCAGTAAAATCAAAATTTA-TCTCTTAAATAAAA
65 TCGCAAGA-AAGCTTTT-TTCCCACCAATT-TTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGA
* ** * *
175713 CAAACTTCA-ACACTCA-TACTAATC-CCGTTC-
125 CAAACAT-AGATTCT-AGTA-AAATCTCCATTCG
* * * * * * * * **
175743 TTTTAGGATTAGGCACCATAAACAAAGTCTTCT-TTTACGGATGCAGGATATTGATAATTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTA-GGATACATGATATTGATGCTTTGGTT
* * * *
175807 TCACAAGAAATGCTTTTTTTCCA-CAATTTTTGTAAATTCTAAGTTCGTAC--CTCAAATGAGAC
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTC--ACTTCTCAAATGAGAC
* * *
175869 AAACATGGATTCTAGTAAAGATCTTCATTCAT
126 AAACATAGATTCTAGTAAA-ATCTCCATTC-G
* * * * * * * **
175901 TTTGA-GATTAGGCACTATAAACACATTCTCCTCATTAGGTTAAATGGTATTAATTGTTTTCCTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGA-TGCTTTGGTT
** * ** ** ** ** * *
175965 T-GCTCGAAAATCTTTTCTTTGC-CTTATTTTCAATAAAATCAAAGTT-TGTTCTTTAAATAAGA
65 TCGCAAG-AAAGCTTTT-TTCCCACCAATTTT-TGTAAAAT-AAAGTTCACTTC-TCAAATGAGA
** ** *
176027 CATGCA-ATGATTCTCTTAAAAGTCCCCATTC-
125 CAAACATA-GATTCTAGTAAAA-TCTCCATTCG
* * * * * * *
176058 TTTCCTAAATTAGG-ATCCAAAAACTCATT-TCCTTCAATAGGATACATGACATTGATTCTTTGG
1 TTTCAT-GATTAGGCA-CCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGG
** * * *** * ** *
176121 TGCCGCAAGAGAAGCTTTTTTTCCACC-GTTAAGGATAAAACCAAAGTTTGTCTAT-T-AAATAA
63 TTTCGCAAGA-AAGCTTTTTTCCCACCAATTTTTG-TAAAA-TAAAG-TTCACT-TCTCAAATGA
* * * *
176183 GACAAACAT-GAATACTCA-TACTAATCCCCATTCT
123 GACAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* * * * * * * *
176217 TTTTAGGATTAGGCACCATAAACATAGTCTTCTCATAAAGATACATGATAATGATGCTTTGGTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * *
176282 CGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAA-TTC-GTGCCTCAAATGAGACA
66 CGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAA--ATAAAGTTCACT-TCTCAAATGAGACA
* * * * *
176345 AACATGGATTCAAGTAAGGATCTTCATTCA
127 AACATAGATTCTAGTAA-AATCTCCATTCG
* * * * * * * **
176375 TTTCGTGATTAGGCACTATAAACGCATTCTGCTCTTTAGGATAAACGATATTGATTG-TTTTCTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGA-TGCTTTGGTT
* * * ** ** *
176439 TTGCATGAAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGTTTGTACTT-T-AAATGA
65 TCGCAAG-AAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGA
* * * *
176500 GACAAGCATTGATTCTCA-TAAAAGTCCCCATTCT
123 GACAAACATAGATTCT-AGTAAAA-TCTCCATTCG
* * * * * * * * *
176534 TTTCAAGATTGGGAACCAAAAAAACATTC-ACTGCATTAGGATACATGACATTGATGCTTTAGTG
1 TTTCATGATTAGGCACCATAAACACATTCTCCT-CATTAGGATACATGATATTGATGCTTTGGTT
* * * * ** * *
176598 TCGCAAGAGAGGCTTTTCTT---TCCAATGTTATCGATAAAATCAAAATT-TGTCTCTAAAATAA
65 TCGCAAGA-AAGCTTTT-TTCCCACCAAT-TT-TTG-TAAAAT-AAAGTTCACT-TCTCAAATGA
* * * *
176659 GACAAAC-TTGAATACTCA-TACTAATC-CCATTCC
123 GACAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* * * * * * *
176692 TTTC-TGGTTTAGGTACCATAAACAAAGTCT--T-A-TACGGATGCAAGATATTGATGATTTGGT
1 TTTCAT-GATTAGGCACCATAAACACATTCTCCTCATTA-GGATACATGATATTGATGCTTTGGT
* * ** * *
176752 TTCGCAAGAAACGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTT-TGTGCCTCAAATGAAAC
64 TTCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGAC
* * **
176815 AAACATGGATTCTAGTAAAGATCTTCATTTA
126 AAACATAGATTCTAGTAAA-ATCTCCATTCG
* * * * * * * **
176846 TTTCATGATTTGGCACTATAAACACATTCTCCTCAATAAGATAAATGATATTGACGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* ** * ** ** *
176911 TGCTTGGAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGTTTGTACTT-T-AAATGAG
66 CGC-AAGAAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGAG
** * * **
176972 ACATGCATTGATTCTCGTAAAAGTCTCCATTAT
124 ACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * *
177005 TTTCAAGATTGGGAATCGA-AAACACATT-TCCTTCATTAGGATACATGACATTCATGCTTTGGT
1 TTTCATGATTAGGCA-CCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGGT
* * * ** *
177068 GTT-GCAAGAGAGGCTTTTCTT---TCCAATGTTATTGATAAAATCAAAATT-TGTCTCTTAAAT
64 -TTCGCAAGA-AAGCTTTT-TTCCCACCAAT-TT-TTG-TAAAAT-AAAGTTCACT-TCTCAAAT
* * * * * *
177128 AAGATAAACTTTA-ATACTCA-TACTAATC-CCATTCT
121 GAGACAAAC-ATAGATTCT-AGTA-AAATCTCCATTCG
* * ** * * * *
177163 TTTCAGGATTAGGCACCAT-AA-ACATTGTTTTCTTATACGGATATAGGATATTGATGATTTGGT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCAT-TA-GGATACATGATATTGATGCTTTGGT
* * * * * * * * *
177226 TTTGCGAGAAATGTTTTTTTCCCA-AAATTTTTCTAAATTTTAAGTTC-GTGCCTCAAATGAGAC
64 TTCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAA-ATAAAGTTCACT-TCTCAAATGAGAC
* * *
177289 AAACATGGATTCTAGTAAAGATCTTCATTCA
126 AAACATAGATTCTAGTAAA-ATCTCCATTCG
* ** * * **
177320 TTTCGTGATTAGGCACTTTAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* ** ** * ** *
177385 TGCTTGGAAATATATTCTTT-GC-CTTATTTTCT-TCAAAATCAAAGTTTGTAC-T-TCAAATGA
66 CGC-AAGAAAGCT-TT-TTTCCCACCAATTTT-TGT-AAAAT-AAAG-TT-CACTTCTCAAATGA
** * * *
177445 GACATGCATTGATTCTCGTAAAAGTCTCCATTCT
123 GACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * *
177479 TTTCAAGATTGGGAACCA-AATACACATTCCCCGCATTAGGATACATGACATTGATGCTTTGGTG
1 TTTCATGATTAGGCACCATAA-ACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGT-
* * * * * * * *
177543 TT-GCATG-CA-CTTTTTCCCCA-TAATTTTTGTAAATTCTAAGTT-AGTGCCTCAAATGAGACA
64 TTCGCAAGAAAGCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGACA
* * * * *
177603 AACATGGATTCAAGTAATGATCTTCATTCA
127 AACATAGATTCTAGTAA-AATCTCCATTCG
* * * *
177633 TTTCGTGATTAGGCACTATAAACACATTCTCCTCACTAAGATACATGATATTGATGGCTTT--TT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGAT-GCTTTGGTT
* * ** *** ** ** * *
177696 CTTGCATGGAATTCTTTTCTT-TGTCTTATTTTCCTTAAATCAAAGTTTGTACTT-T-AAATGAG
65 -TCGCA-AGAAAGCTTTT-TTCCCACCAATTTTTGTAAAAT-AAAG-TT-CACTTCTCAAATGAG
* * * *
177758 ACAAGCATTGATTCTCGTAAAAGTCTCCATTCT
124 ACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * * * * *
177791 TTTCAAGATTGGGAACCAAAAAAACATTC-ACTACATTACGATACATGACATTGATGCTTTGGTG
1 TTTCATGATTAGGCACCATAAACACATTCTCCT-CATTAGGATACATGATATTGATGCTTTGGTT
* * * * ** * *
177855 TCGCAAGAGAGGCTTTTCTT---TCCAATGTTATCGATAAAATCAAAATT-TGTCTCTTAAATAA
65 TCGCAAGA-AAGCTTTT-TTCCCACCAAT-TT-TTG-TAAAAT-AAAGTTCACT-TCTCAAATGA
* * * *
177916 GACAAAC-TTGAATACTCA-TACTAATC-CCATTCC
123 GACAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* * * * * * * * * *
177949 TTTCAGGTTTAGGTACCATAAACAAAGTCTTCTTA-TACGGATGCAGGATATTGATGATTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTA-GGATACATGATATTGATGCTTTGGTT
* * * * *
178013 TAC-CAAGAAA-CGTTTTTTCCCA-CAATTTTTATAAATTCTAAA-TTC-GTGCCTTAAATGAGA
65 T-CGCAAGAAAGC-TTTTTTCCCACCAATTTTTGTAAA--ATAAAGTTCACT-TCTCAAATGAGA
* * *
178073 CAAACATTGATTCTAGTAAAGATCTTCATTCA
125 CAAACATAGATTCTAGTAAA-ATCTCCATTCG
* * * *
178105 TTTCGTAATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGCTTT--CT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGAT-GCTTTGGTT
* * * ** ** * *
178168 CCTGCATGGAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATGAAAGTTTGTACAT-T-AAATG
65 TC-GCA-AGAAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATG
** * * *
178229 AGACATGCATTGATTCTTGTAAAAGTCTCCATTCT
122 AGACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * *
178264 TTTAATGATTGGGAACCA-AAAGCACATT-TCCTTTATTAGGATACATGACATTGATGCTTTGGT
1 TTTCATGATTAGGCACCATAAA-CACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGGT
* * * * ** ** * *
178327 GTCACAAGAAAAGCTTTTGTTTCCACC-GTTAATGATAAAATCAAAGTT-TGTCTCTTAAATAAG
64 TTCGCAAG-AAAGCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGAG
* * * *
178390 ACAAACAT-GAATACTCAG-ACTAATCCCCATTCT
124 ACAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* * * * * * *
178423 TTTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * * * * * * *
178488 TGCAAGAAAGGCTTTTTTCCCACTAGTTTTTCTAAATTCTAAGTTC-GTGCCTTAAATGAGATAA
66 CGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGACAA
* * * * *
178552 AGATGGATTCTAGTAAGGATCTACATTCA
128 ACATAGATTCTAGTAA-AATCTCCATTCG
* * * * *
178581 TTTCATGATTAGGCACTATAAACACAATCTCTTCAATAGGATAAATGATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGAT-G----CTTT
** * * * ** ** *
178646 CCCACAATTTTGCATGGAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGTTTGTA-TT
61 -----GGTTTCGCA-AGAAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTT
* * ** * * *
178708 -TTAAATGTGACATGCATAGATTCTCGTAAAAGTCTCTATTCT
114 CTCAAATGAGACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * **
178750 TTTCATGATT-GAGAACCAAAAACACATTC-CTTTCATTAGGATACATGACATTGACACTTTGGT
1 TTTCATGATTAG-GCACCATAAACACATTCTC-CTCATTAGGATACATGATATTGATGCTTTGGT
* * ** * ** * *
178813 CTT-GCAAGAGAAGCTTTTGTTTCCACC-GTTATTAATAGAATCAAAGTTTGTCTCCT-AAATAA
64 -TTCGCAAGA-AAGCTTTT-TTCCCACCAATT-TTTGTAAAAT-AAAG-TTCACTTCTCAAATGA
* ** * *
178875 GACAAACAT-GAATACTCTTACTAATC-CACATTCT
123 GACAAACATAG-ATTCTAGTA-AAATCTC-CATTCG
* *** * * *
178909 TTTCAGGATTAGGCACCATAAACATGGTCTTCTCATAAGGATACATGATATTGATGCTATGGTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * * * * *
178974 CGCGAGATATGCTTTCCTTCCAACCAATTTGTGTAAAGTATGAGTTCA-TTGCTCAAATAAGACA
66 CGCAAGA-AAGCTTT-TTTCCCACCAATTTTTGTAAAATA-AAGTTCACTT-CTCAAATGAGACA
* * ** * * *
179038 AACATGGATTCTTGTAGGGATCTTCACTCA
127 AACATAGATTCTAGTA-AAATCTCCATTCG
* * * * * **
179068 TTTCGTCATTAGGCACTATAAACACATTCTGCC-CTTTAGGATAAATGATATTGATAG-TTTTCT
1 TTTCATGATTAGGCACCATAAACACATTCT-CCTCATTAGGATACATGATATTGAT-GCTTTGGT
* * * * ** * * *
179131 TTTGCATGGAAATCTTTTCCTT-GC-CTTATTTTCCT-TAAAAGCAAAGTTTGTACTT-T-ATAT
64 TTCGCA-AGAAAGCTTTT--TTCCCACCAATTTT--TGTAAAA-TAAAG-TT-CACTTCTCAAAT
* ** * * * *
179191 GATACATGCATTGATTCTCGTAAAAGTCTCCGTT-T
121 GAGACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * * * * *
179226 TTTTAAGATTGGGAACCAAAAACACATTC-CCTTCTTTAGGATTCATGACATTGATGCTTTGGTG
1 TTTCATGATTAGGCACCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGGTT
* * * * ** * * *
179290 TCGCAAGAGAGGCTTTTATT---TCCAATGTTATCGATAAAATCAAAATTTGCCTCTTAAATAAG
65 TCGCAAGA-AAGCTTTT-TTCCCACCAAT-TT-TTG-TAAAAT-AAAGTTCACTTCTCAAATGAG
* * * * *
179352 ATAAACAT-GAATACTCA-TACTAATCCCCATTCT
124 ACAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* * * * * * *
179385 TTTCAGGATAAGGCACCATAAACA-TTGTCTTCTCATAAGGATGCATGATATTGATGCTTTGGAT
1 TTTCATGATTAGGCACCATAAACACAT-TCTCCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * * * * *
179449 GCGCAAGATACGCTTTCTTCCAACCAATTTGTGTAAAGTATGAGTTCA-TTGCTCAAATGAGACA
65 TCGCAAGA-AAGCTTTTTTCCCACCAATTTTTGTAAAATA-AAGTTCACTT-CTCAAATGAGACA
* * * ** * *
179513 AACTTGGATTCTTGTAGGGATCTTCATTCA
127 AACATAGATTCTAGTA-AAATCTCCATTCG
** * * **
179543 TTTCATGATTAGGCATTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* ** * ** ** *
179608 TGCTTGGAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGTTTTTACTT-T-AAATGAG
66 CGC-AAGAAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG--TTCACTTCTCAAATGAG
** * *
179669 ACATGCATTGATTCTCA-TAAAAGTCTCCATTCT
124 ACAAACATAGATTCT-AGTAAAA-TCTCCATTCG
* * * * * * *
179702 TTTCAAGATTAGGAACCAAAAACACAATC-CCTGCATTAGGATGCATGACATTGATGCTTTGGTG
1 TTTCATGATTAGGCACCATAAACACATTCTCCT-CATTAGGATACATGATATTGATGCTTTGGTT
* * * * * * * * * * *
179766 TCGTAA-AAGAGGCTTTTCTTTCCAAC-GTTATCGATAAAATCAAAATTTA-TCTCTTAAATAAA
65 TCGCAAGAA-A-GCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGAG
* * *
179828 ACAAACTTTA-ATACTCA--AACTAATC-CCGTTC-
124 ACAAAC-ATAGATTCT-AGTAA--AATCTCCATTCG
* * * * * * * * *
179859 TTTTAGGATTAGGCACCATAAACAAAGTCTTCT-TTTACGGATGCAGGATATTGATGATTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTA-GGATACATGATATTGATGCTTTGGTT
* * * * * *
179923 TTGCAAGAAACGTTTTTTTCCCA-TAATTTTTGTAAATTCTAAGTTTGTAC--CTCAAATGAGAC
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAG-TT-CACTTCTCAAATGAGAC
* * *
179985 AAACATGGATTCTAGTAAAGATCTTCATTCAT
126 AAACATAGATTCTAGTAAA-ATCTCCATTC-G
* * * * **
180017 TTTGA-GATTAGGCACTATAAACACATTCTCTTCATTAGGATAAATGATATTGATTG-TTTTCTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGA-TGCTTTGGTT
* ** * * * ** *
180080 TTGCTCGAAAATCTTTTCTT--TACCTTATTTTCCT-TAAAATCTTAGTTTGTACTT-T-AAATG
65 TCGCAAG-AAAGCTTTT-TTCCCACC-AATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATG
** * * *
180140 AGACATTCATTGATTTTAGTAAAACTCCCCATTC-
122 AGACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * ** *
180174 TTTCCAAGATTAGG-ATCCAAAAACTCATT-TCCTTCAAAAGGATACATGACATTGATGCTTTGG
1 TTT-CATGATTAGGCA-CCATAAACACATTCTCC-TCATTAGGATACATGATATTGATGCTTTGG
* * * * *** ** * *
180237 TGTCACAAGAGAAGCTTTTTTTTCCACC-GTTAAAGATAAAATCAAAGTT-TGTCTCTTAAATAA
63 TTTCGCAAGA-AAGC-TTTTTTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGA
* * * *
180300 GACAAACATGGATAATC-A-TACTAATCCCCATTCT
123 GACAAACATAGAT--TCTAGTA-AAATCTCCATTCG
* * * * * * * *
180334 TTTTAGGATTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATAGTGATGCTTTGGTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * *
180399 CGCAAGAAACACTTTCTTCCCACCAATTTTTG-AAAATTCTAAA-TTC-GTGCCTCAAATGAGAC
66 CGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAA---TAAAGTTCACT-TCTCAAATGAGAC
* * ** *
180461 AAACATGGATTCTAGTAAGGATCTTAATTCA
126 AAACATAGATTCTAGTAA-AATCTCCATTCG
* * * * * * * **
180492 TTTCGTGATTAGGCACTATAAACACATTCTACTCTTTAGGATAAACGATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * ** ** *
180557 CGCATGAAAATCTTTTCTTTGCC-TTATATTCCT-TAAAATCAAAGTTTGTACTT-T-AAATGAG
66 CGCAAG-AAAGC-TTT-TTTCCCACCA-ATTTTTGTAAAAT-AAAG-TT-CACTTCTCAAATGAG
** * * * *
180618 ACATGCATTGATTCTCGTAAAAGTATCCATTCT
124 ACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * *
180651 TTTCAAGATTGGGAACCAAAAACACATTC-CCTCCATTAGGATACAAT-ATATTGATGCTTTGGT
1 TTTCATGATTAGGCACCATAAACACATTCTCCT-CATTAGGATAC-ATGATATTGATGCTTTGGT
* * * * * * * ** * **
180714 GTT-GCAA-AAGAGGCTTTTCTTTCAAAC-GTTATCGATAAAATCAAAATT-TGTCTCTTAAACA
64 -TTCGCAAGAA-A-GCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATG
* * * *
180775 AGATAAAC-TTGAATACTCA-TAATAATC-CCATTCTT
122 AGACAAACATAG-ATTCT-AGTAA-AATCTCCATTC-G
* *** * *
180810 TTTCAAGATTAGGCACCATAAA-TGTTGTCTTCCT-A-TATGGATACAGGATATTGATGATTTGG
1 TTTCATGATTAGGCACCATAAACACAT-TC-TCCTCATTA-GGATACATGATATTGATGCTTTGG
* * * * ** ** *
180872 TTTCACGAGAAACGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTTGCGCCTCAAATAAGAC
63 TTTCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCACTTCTCAAATGAGAC
* * * * *
180936 AAGCATGGATTCTAGTAAAGATCTTCGTTCA
126 AAACATAGATTCTAGTAAA-ATCTCCATTCG
* * * * * * **
180967 TTTCGTGATTAGGCACTATAAACGCATTCTCCTAATTAGGATAAATGATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* ** * ** ** * *
181032 TGCTTGGAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGTTTGTACTT-T-AAATGAA
66 CGC-AAGAAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGAG
** * * *
181093 ACATGCATTGATGCTCA-TAAAAGTCTCCATTCT
124 ACAAACATAGATTCT-AGTAAAA-TCTCCATTCG
* * * * * * *
181126 TTTCAAGATTAGGAACCAAAAACACAATCT-CTACATTAGGATACATGACATTGATGTTTTGGTG
1 TTTCATGATTAGGCACCATAAACACATTCTCCT-CATTAGGATACATGATATTGATGCTTTGGTT
* * * ** * ** * ** * *
181190 TCGGAAGAGAGGCTTTCCTTT-CCAACGGTATCGGTAAAATCAAAAATTGTC-TCTTAAATAAGA
65 TCGCAAGA-AAGCTTT--TTTCCCACCAATTTTTGTAAAAT--AAAGTTCACTTCTCAAATGAGA
* * * * *
181253 CAAAC-TTGAATACTCA-TACTAATCCCCATTCT
125 CAAACATAG-ATTCT-AGTA-AAATCTCCATTCG
* ** * * * *
181285 TTTCAGGATTAGGCACCATAAACGTAGTCAT-CTCATAAGGATACAAGATAGTGATGCTTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTC-TCCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * * * *
181349 TCACAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTC-CTGCCTCAAATGAGACA
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGACA
* * * *
181413 AACTTGGATTCTAGTAAGGATCT-CATTCA
127 AACATAGATTCTAGTAA-AATCTCCATTCG
* * * * * * * **
181442 TTTCATGATTAGGCACTATAAATACAATCTCCTCCTTAGGATAAATGATATTAATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * * * ** * * *
181507 TGCATGAAAATCTTTTCTTTGCCA--TATTTTCCCTAAAATCAATGTTTGTACTT-T-AAATGAA
66 CGCAAG-AAAGC-TTT-TTTCCCACCAATTTT-TGTAAAAT-AAAG-TT-CACTTCTCAAATGAG
** * * *
181568 ACATGCATTGATTCTCGTAAAAGTCTCCATTCT
124 ACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * *
181601 TTTCAAGATTGGGAACCATAAACACATTC-CCTCCATTAGGATACAAT-ACATTGATGCTTTGGT
1 TTTCATGATTAGGCACCATAAACACATTCTCCT-CATTAGGATAC-ATGATATTGATGCTTTGGT
* * * * * * * ** * *
181664 GTCGCAA-AAGAGGCTTTTCTTTCCAAC-GTTATCGATAAAATCAAAATT-TGTCTCTTAAATAA
64 TTCGCAAGAA-A-GCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTCACT-TCTCAAATGA
* * * *
181726 GATAAAC-TTGAATACTCA-TAATAATC-CCATTCTT
123 GACAAACATAG-ATTCT-AGTAA-AATCTCCATTC-G
* * * * * * *
181760 TTTCAGGATTAGGCACCAT-AA-ACGTTGTCTTCTTATATGGATACAGGATATTGATGATTTGGT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCAT-TA-GGATACATGATATTGATGCTTTGGT
* * * * * * ** ** *
181823 TTCACGAGAAACGCTTTTTTCTCA-TAATTTTTTGTAAATTCTAAGTTTGCGCCTCAAATAAGAC
64 TTCGCAAGAAA-GCTTTTTTCCCACCAA-TTTTTGTAAAAT-AAAGTTCACTTCTCAAATGAGAC
* * * * *
181887 AAGCATGGATTCTAGTAAAGATCTTCGTTCA
126 AAACATAGATTCTAGTAAA-ATCTCCATTCG
* ** * * * * * **
181918 TTTCGTGATTAGGTTCTATAAACGCATTCTCCTTATTAGGATAAATGATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* ** * ** ** * *
181983 TGCTTGAAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGATTGTACTT-T-AAATGAA
66 CGCAAG-AAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGAG
*** * *
182044 ACTTGCATTGATTCTCA-TAAAAGTCTCCATTCT
124 ACAAACATAGATTCT-AGTAAAA-TCTCCATTCG
* * * * * ** * *
182077 TTTCAAGAGTAGGAACCAAAAACACAATC-CCTACATTAGGATACATGGCATTGATGTTTTGGTG
1 TTTCATGATTAGGCACCATAAACACATTCTCCT-CATTAGGATACATGATATTGATGCTTTGGTT
* * * * * * * ** *
182141 TCGGAAGAGAGGCTTTCCTTT-CCAACGA-TATCGCTAAAATCAAAAATTGTC-TCTTAAAT-AG
65 TCGCAAGA-AAGCTTT--TTTCCCACCAATTTTTG-TAAAAT--AAAGTTCACTTCTCAAATGA-
* * * * *
182202 GATAAAC-TTGAATACTCA-TACTAATC-CTCATTCT
123 GACAAACATAG-ATTCT-AGTA-AAATCTC-CATTCG
* * * * *
182236 TTTCATGATTAGGCACCATAAACATAGTCAT-CTCATAAGGATACAAGATAGTGATGCTTTGGTT
1 TTTCATGATTAGGCACCATAAACACATTC-TCCTCATTAGGATACATGATATTGATGCTTTGGTT
* * * * * * *
182300 TCGCAAGAAACACTTTCTTCCAACCAATTTTTGTAAATTCTAAGTTC-CTGCCTCAAGTGAGACA
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCACT-TCTCAAATGAGACA
* * * * *
182364 AACTTGGATTCTAGTAAGGATCTTCATTCA
127 AACATAGATTCTAGTAA-AATCTCCATTCG
* * * * * * **
182394 TTTCGTGATTAGGCACTATAAACACATTCTCCTCCTTAGGATAAATGATATTCATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * * ** **
182459 TGCATGAAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGTTTGCACTT-T-AAATGAG
66 CGCAAG-AAAGCTTTT-TTCCCACCAATTTT--TGTAAAAT-AAAG-TT-CACTTCTCAAATGAG
** * * * *
182520 ACATGCATTGATTCTCGTAAAAGTCTCCTTTCT
124 ACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * * * **
182553 TTTCAAGATTGGGAACCAAAAAAAACACATTCTCTTCGTTAGGATGCATGACGTTGATGCTTTGG
1 TTTCATGATTAGGCACC---ATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGG
** * * * ** * *
182618 AGTCGCAAGAGAAGATGTTCTTT-CCACC-ATTATTTATAGAATCAAAGGTTGTC-TCTTAAATA
63 TTTCGCAAGA-AAGCT-TT-TTTCCCACCAATT-TTTGTAAAAT-AAA-GTTCACTTCTCAAATG
* * * *
182680 AAACAAAC-TTGAATAGTC-A-TATTAATC-CACATTCT
122 AGACAAACATAG-AT--TCTAGTA-AAATCTC-CATTCG
* * * ** * * * *
182715 TTTC-TAGATTAGGCACCAGAAACATAGTCTTATCATAAGGATGCAGGATATTGATTCTTTGGTT
1 TTTCAT-GATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTT
*** * * * * *
182779 TCGTGGGAAACGCTCTCTTCCCACTAATTTTTGTAAAGTATAAGTTC-TTTCCTCAAATGAGACA
65 TCGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAATA-AAGTTCACTT-CTCAAATGAGACA
* * ** *
182843 AACATGGATTCTAGTAAGGATCTTTATTCA
127 AACATAGATTCTAGTAA-AATCTCCATTCG
* * * * * **
182873 TTTCGTGATTAGGCACC-TAAACACATTCTCCCCATTGGGATAAATGATATTGATGGTTTTCTTT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
** ** * * * * * *
182937 TACTTGGAAATCTTTTATTTGCC-TCACTTTCCT-TAAAATCAAAGTTTGTACTT-T-AAATGAG
66 CGC-AAGAAAGC-TTT-TTTCCCACCAATTT-TTGTAAAAT-AAAG-TT-CACTTCTCAAATGAG
* * * * *
182998 ACAAGCATTGATTCTCGTAAAAGTCTCCCTT-T
124 ACAAACATAGATTCTAGTAAAA-TCTCCATTCG
* * * * * * * * *
183030 TTTCCAAGATTGGGAACCAAAAACACTTTCTCTTCATTAGGATATATGACATTGATGCTTTGGTG
1 TTT-CATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTT
* * ** * *
183095 TCGCAAGAGAAGCTTTTCTTTCCACC-GTTAATGATAAAATCAAAG-TCTA-TCTCTTAAATAAG
65 TCGCAAGA-AAGCTTTT-TTCCCACCAATTTTTG-TAAAAT-AAAGTTC-ACT-TCTCAAATGAG
* * * * *
183157 ATAAACAT-GAATACTCA-CACTAATAC-CCATTCT
124 ACAAACATAG-ATTCT-AGTA-AAAT-CTCCATTCG
* * * * * * ** * *
183190 TTTCAGGATTAGGCACTATAAACATAGTCTTCTCATAAGGATACGGGATATTGATGATTTGGTCT
1 TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
* * *
183255 AGCAAGAAATGGTTTTTTCCCACCAATTTTTGTAAATTCAAAGTTCA
66 CGCAAGAAA-GCTTTTTTCCCACCAATTTTTGTAAAAT-AAAGTTCA
183302 TGCTTAAAAG
Statistics
Matches: 11458, Mismatches: 3388, Indels: 2709
0.65 0.19 0.15
Matches are distributed among these distances:
129 5 0.00
131 12 0.00
132 3 0.00
134 4 0.00
135 6 0.00
136 2 0.00
137 10 0.00
138 6 0.00
139 12 0.00
140 5 0.00
141 13 0.00
142 8 0.00
145 2 0.00
146 2 0.00
147 10 0.00
148 55 0.00
149 277 0.02
150 62 0.01
151 41 0.00
152 18 0.00
153 48 0.00
154 160 0.01
155 332 0.03
156 480 0.04
157 1371 0.12
158 3057 0.27
159 4437 0.39
160 582 0.05
161 90 0.01
162 157 0.01
163 65 0.01
164 12 0.00
166 1 0.00
168 21 0.00
169 88 0.01
170 3 0.00
171 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (155 bp):
TTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATACATGATATTGATGCTTTGGTTT
CGCAAGAAAGCTTTTTTCCCACCAATTTTTGTAAAATAAAGTTCACTTCTCAAATGAGACAAACA
TAGATTCTAGTAAAATCTCCATTCG
Found at i:170669 original size:159 final size:158
Alignment explanation
Indices: 166624--174109 Score: 2373
Period size: 159 Copynumber: 47.5 Consensus size: 158
166614 CCAGTAAGGA
* * * * * * *
166624 TCTTTTCATGGTTAGGTACTATAAACACATTCTCC-TCATCAGAATACATGATATTGATGGTTTT
1 TCTTTTCATGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATGATATTGATGCTTTG
* * ** * *
166688 CTTTTGCGTG-GAAATCTTTTCTTTGCCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA
65 GTTTCGCAAGAG-AAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGA
*
166752 GACATGCATTGATTCTCGTAAAAGTCTCCAT
128 GACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * *
166783 TCTTTTCATGATTGGGAACCA-AAAGCACATTTCCTTCAATAGGATACATGACATTAATGCTTTG
1 TCTTTTCATGATTAGGCACCATAAA-CACATTTCCTTCATTAGGATACATGATATTGATGCTTTG
* * * * * *
166847 GTGTCACAACAGAGGCTTTTCTTT-CC-AATGTTATCGATAAAATCAAAATTTGT-CTCTTAAAT
65 GTTTCGCAAGAGAAGCTTTTCTTTGCCAAAT-TT-TC-TTAAAATCAAAGTTTGTACT-TTAAAT
* * * * * *
166909 AAGATAAAC-TTGAATACTCATACTAA-TC-CCAT
126 GAGACAAGCATTG-ATTCTCGTA-AAAGTCTCCAT
* * * * * *
166941 TGTTTTCAGGATTAGGCACCATAAACATAGTCTT-CTT-A-TACGGATATAGGATATTGATGATT
1 TCTTTTCATGATTAGGCACCATAAACACA-T-TTCCTTCATTA-GGATACATGATATTGATGCTT
* * * * * * * * **
167003 TGGTTTTGC--GAGAAGCGCTTT-TTTCCCACAATTTT-TGTAAATTCTAAGTTCGTGCCTCGAA
63 TGGTTTCGCAAGAGAAGC-TTTTCTTTGCCA-AATTTTCT-TAAAATCAAAGTTTGTACTTTAAA
** * *
167064 TGAGACAAAG-ACGGATTCTAGT-AAAGATCTTCAT
125 TGAGAC-AAGCATTGATTCTCGTAAAAG-TCTCCAT
* * * * *
167098 TCATTTCATGATTAGGCACTATAAACACATTCTCCTT-ATTAGGATAAATGATATTGATGGTTTT
1 TCTTTTCATGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATGATATTGATGCTTTG
* * ** * * ** *
167162 CTTTTGCTTGCA-AATCTTTTTTTTTTTTGCCTTATTTTCCTTAAAATCAGAGTTTGTACTTTAA
65 GTTTCGCAAG-AGAAGC----TTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAA
* *
167226 ATGAGACATGCATTGATTCTCATAAAAGTCTCCAT
124 ATGAGACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * * * *
167261 TCTTTTCAAGATTGGGAACCA-AAACACATTCCCTGCATTAGCATACATGACATTGATGCTTTGG
1 TCTTTTCATGATTAGGCACCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTGG
* * * * * * * *
167325 TGTCGCAAGAGAGGCTTTTCTTT-CCAACGTTATCGATATAATCAAAATTTGT-CTCTTAAATAA
66 TTTCGCAAGAGAAGCTTTTCTTTGCCAA-ATTTTC-TTAAAATCAAAGTTTGTACT-TTAAATGA
* * * *
167388 GACAAAC-TTGAATACTCATACTAA-TC-CCAT
128 GACAAGCATTG-ATTCTCGTA-AAAGTCTCCAT
* * * *
167418 TCTTTTCAGGATTAGGCACCATAAACAAAGTCTT-CTT-A-TACGGATGCATGATATTGATGATT
1 TCTTTTCATGATTAGGCACCATAAACACA-T-TTCCTTCATTA-GGATACATGATATTGATGCTT
* * * ** * * *
167480 TGGTTTCGCAAGA-AATGC-TTT-TTTCCCAAAATTTT-TGTAAATTCTAAGTTCATGCCTCAAA
63 TGGTTTCGCAAGAGAA-GCTTTTCTTTGCC-AAATTTTCT-TAAAATCAAAGTTTGTACTTTAAA
* * * * *
167541 AGAGACAAACATGGATTCTAGT-AAAGATCTTCAT
125 TGAGACAAGCATTGATTCTCGTAAAAG-TCTCCAT
* * *
167575 TCATTTCGTGATTAGGCACTATAAACACATTCTCC-TCATTAGGATACATGATATTGATTG-TTT
1 TCTTTTCATGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATGATATTGA-TGCTTT
** * * * **
167638 TCTTTTGCATG-GAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
64 GGTTTCGCAAGAG-AAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATG
* * *
167702 AGACATGCATTCATTCTTGTAAAAGTCTCCAT
127 AGACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * * *
167734 TCTATTT-AAGATTGGGAACCA-AAATCCCA-TTCTTTCATTAGGATACATGACATTGATGCTTT
1 TCT-TTTCATGATTAGGCACCATAAA-CACATTTCCTTCATTAGGATACATGATATTGATGCTTT
* * * ** * * * *
167796 GGTGTCGTAAGAGAAGCTTGTCTTT-CCACCGTTATCGATAGAATCAAAATTTGT-CTCTTAAAT
64 GGTTTCGCAAGAGAAGCTTTTCTTTGCCA-AATTTTC-TTAAAATCAAAGTTTGTACT-TTAAAT
* * * ** *
167859 AAGACAAACA-TGAATACTCACACTAA-TC-CACAT
126 GAGACAAGCATTG-ATTCTCGTA-AAAGTCTC-CAT
* * * * *
167892 TCTTTAC-TGGATTAGGCACCATAAACATCATCTT-C-TCATAAAGATAAATGATATTCATGCTT
1 TCTTTTCAT-GATTAGGCACCATAAACA-CAT-TTCCTTCATTAGGATACATGATATTGATGCTT
* ** * * *
167954 TGGTTTCGCAAGA-AACGC-TTTCTTT-CCACCAATTTT-TGTAAAGT-ATAAGTTCATTCCTCA
63 TGGTTTCGCAAGAGAA-GCTTTTCTTTGCCA--AATTTTCT-TAAAATCA-AAGTTTGTACTTTA
* * * * * * * *
168014 AATTAGACAAACATGGATTATAG-CAAGGATCTTCAT
123 AATGAGACAAGCATTGATTCTCGTAAAAG-TCTCCAT
* * * * * *
168050 TCATTTT-GTGATTAGACACTATAAACACATTCTCCTT-ATTAGGATAAATTATATTGATGGTTT
1 TC-TTTTCATGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATGATATTGATGCTTT
** * * * * * *
168113 TCTTTTGCATG-GAAATCTTTTCTTTGCGATATTTTCCTTAAAATCAAAGTTTGCACTTTAAATG
64 GGTTTCGCAAGAG-AAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATG
* * *
168177 ATA-ATGCATTGATTCTCGTAAAAGTCTCCAC
127 AGACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * * * * * *
168208 TCTTTTCAAGATTGGGAACCAAAAACTCATTCCCTTCATTAGGATACATGACATTGAAGCTTCGG
1 TCTTTTCATGATTAGGCACCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTGG
* * ** ** * * *
168273 TGTCGCAAGAGAAGCTGTTCTTT-CCACGGTTATTGATAGAATCAAAGTTTGT-TTCTTAAATAA
66 TTTCGCAAGAGAAGCTTTTCTTTGCCA-AATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGA
* ** * *
168336 GACAAACA-TGAATAGTCATACTAA-TC-CACAT
128 GACAAGCATTG-ATTCTCGTA-AAAGTCTC-CAT
* * *
168367 TCTTTTC-TGGATTAGGGACCAT-AA-AC-TTGGTCTTCTCATAAGGATACATGATATTGATGCT
1 TCTTTTCAT-GATTAGGCACCATAAACACATT--TCCT-TCATTAGGATACATGATATTGATGCT
* * * *
168428 TTTGTTTCGTAAGA-AACGC--TT-TTTGCCCACCAATTTT-TGTAAAGT-ATAAG-TT-CACTT
62 TTGGTTTCGCAAGAGAA-GCTTTTCTTTG-CCA--AATTTTCT-TAAAATCA-AAGTTTGTACTT
* * * *
168485 CTCAAATGAGACAAACATAGATTCTAGT-AAAGATCTTCAT
121 -T-AAATGAGACAAGCATTGATTCTCGTAAAAG-TCTCCAT
* * * * * * *
168525 TCGTTTCCTGATTAGGCTCTATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTT
1 TCTTTTCATGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATGATATTGATGCTTTG
* * * * * * * *
168589 CTTTTGCATG-GAAATCTTTTCCTTGCCTAATTTTCCTTAAAACCAAAGTTTGTACTTTAAAAGA
65 GTTTCGCAAGAG-AAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGA
*
168653 GACATGCATTGATTCTCGTAAAAGTCTCCAT
128 GACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * *** *
168684 TCTTTCCAAGATTAGG-ATCCA-AGAACTTGTTTCCTTCATTAGGATACATGACATTGATGCTTT
1 TCTTTTCATGATTAGGCA-CCATA-AACACATTTCCTTCATTAGGATACATGATATTGATGCTTT
* * ** * **
168747 GGTGTCGCAAGACAAGCTTTTCTTT-CCACCGTTAGTGATAAAATCAAAGTTTTGT-CTCTTAAA
64 GGTTTCGCAAGAGAAGCTTTTCTTTGCCA-AATT-TTCTTAAAATCAAAG-TTTGTACT-TTAAA
* * * * * * *
168810 TAAGACAAACATGGATACTCATACTAA-TCCCCAT
125 TGAGACAAGCATTGATTCTCGTA-AAAGTCTCCAT
* * * * *
168844 TCTTTTCAGGATTAGGCACCATAAACATAGTCTT-C-TCGTAAGGATAC-TAGATATTGATGATT
1 TCTTTTCATGATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACAT-GATATTGATGCTT
* * ** * * * * * *
168906 TGGTTTAGCAAGA-AACGATTTT-TTCCCTCCAATTTT-TGTAAATTCTAAGTTCGTACCTCAAA
63 TGGTTTCGCAAGAGAA-GCTTTTCTTTGC-CAAATTTTCT-TAAAATCAAAGTTTGTACTTTAAA
* * * *
168968 TGAGACAAACATAGATTCTAGT-AAAGATCTTCAT
125 TGAGACAAGCATTGATTCTCGTAAAAG-TCTCCAT
* * *
169002 TCGTTTCATGATTAGGCACCATAAACGCATTCTCC-TCATTAGGATAAATGATATTGATTG-TTT
1 TCTTTTCATGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATGATATTGA-TGCTTT
** * * * ** * *
169065 TCTTTTGCATG-GAAATCTTTTCTTTGCCTTATTTTCCTTAAAACCAAAGTTTATACTTTAAATG
64 GGTTTCGCAAGAG-AAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATG
* * *
169129 AGACATGCATTGATTCTCATAAAAGTCCCCAT
127 AGACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * *
169161 TCTTTCCAAGATTAGG-ATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGATGCTTTG
1 TCTTTTCATGATTAGGCA-CCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTG
* * ** ** **
169225 GTGTCGCAAGAGAAGCTTTT-TTTTCCACCGTTATTGATAAAATCAAAGTTTGT-CTCTTAAACA
65 GTTTCGCAAGAGAAGCTTTTCTTTGCCA-AATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATG
* * * * * *
169288 AGACAAACATGGATACTCATACTAA-TCCCCAT
127 AGACAAGCATTGATTCTCGTA-AAAGTCTCCAT
* * * *
169320 TCTTTTTCAGGATTAGGCACCATAAACATAGTGTT-C-TCATAAGGATAC-TGGATATTGATGAT
1 TC-TTTTCATGATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACAT-GATATTGATGCT
* * ** * * * ** * * *
169382 TTGGTTTAGCAAGA-AACGGTTTT-TTCCCTCCAATTTT-TGTAAATTCTAAGTTCATGCCTCAA
62 TTGGTTTCGCAAGAGAA-GCTTTTCTTTGC-CAAATTTTCT-TAAAATCAAAGTTTGTACTTTAA
* * * * *
169444 ATGAG---ATCATGGATTCTAGTAAGTA-TCTTCAT
124 ATGAGACAAGCATTGATTCTCGTAA-AAGTCTCCAT
* * * * * * * *
169476 TCATTTCGTGATTAGGCACTATAAACACAATCTCC-TCATCACGATACATGATATTGATGGTTTC
1 TCTTTTCATGATTAGGCACCATAAACAC-ATTTCCTTCATTAGGATACATGATATTGATGCTTTG
* * * * * * ** *
169540 CTTTTGCATG-GAAACCTTTTCCTTCCCTTATTTTCCTTAAAATCAAAGTTTGCACTTTAAATGA
65 GTTTCGCAAGAG-AAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGA
** * *
169604 GACATCCATTGATTCTTGCAAAAGTCTCCAT
128 GACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * * * * **
169635 TCGTTTT-AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACACGATGTTGACACTTTG
1 TC-TTTTCATGATTAGGCACCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTG
* * * ** * ** * *
169699 GTGTCACAAGAGAAGCTTGTCCAT-CCACCATTATTGATAGAATCAAAGTTTGT-CTCTTAAATA
65 GTTTCGCAAGAGAAGCTTTTCTTTGCCA-AATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATG
* * * *
169762 AGACAAACA-TGAATACTCAATACTAA-TC-CACAT
127 AGACAAGCATTG-ATTCTC-GTA-AAAGTCTC-CAT
* * * * *
169795 TCTTTTC-TAGATTAGGCACCGTAAACATAGTCTT-CTT-GTAAGGATAAATGATATTGATGCTT
1 TCTTTTCAT-GATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACATGATATTGATGCTT
* ** * * ** * ***
169857 TGGTTTGGCAAGA-AACGC-TTTCTTCCCCCCAATTTT-TGTAAAGT-ACAAGTTCATTCCGCAA
63 TGGTTTCGCAAGAGAA-GCTTTTCTT-TGCCAAATTTTCT-TAAAATCA-AAGTTTGTACTTTAA
* * ** * * *
169918 ATTAGACAAACAGGGATTCTAGT-AAGGATCTTCAT
124 ATGAGACAAGCATTGATTCTCGTAAAAG-TCTCCAT
* * * ** * * * *
169953 ACATTTCGTGATTAGGCACTTTAAACACATTCTCC-TCATTAGGATAAATAATATTGATGGTTTT
1 TCTTTTCATGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATGATATTGATGCTTTG
* * * * ** *
170017 CTTTTGCATGA-ATATCTTTTCTTTGCCCCATTTTCCTTAAAATCAAAGTTTGTACATTAAATGA
65 GTTTCGCAAGAGA-AGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGA
* * *
170081 GACATGCATTGATTCTCATGAAAGTCTCCAT
128 GACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * * * *
170112 TCTTTCCAAGATT-GGGATCCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTG
1 TCTTTTCATGATTAGGCA-CCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTG
* * * * * * * * *
170176 GTGTCACAAGAGAGGCTTTTCTTT-CCAACGTTATCGATAAAATTAAAATTTGT-CTCTTAAATA
65 GTTTCGCAAGAGAAGCTTTTCTTTGCCAA-ATTTTC-TTAAAATCAAAGTTTGTACT-TTAAATG
* * * * * *
170239 AGATAAAC-TTGAATACTCATACTAA-TC-CTAT
127 AGACAAGCATTG-ATTCTCGTA-AAAGTCTCCAT
* * * * * *
170270 TCTTTTCAGGATTAGGTACCATAAACATAGTCTT-CTT-A-TACGGATATAGGATATTGATGATT
1 TCTTTTCATGATTAGGCACCATAAACACA-T-TTCCTTCATTA-GGATACATGATATTGATGCTT
* * * * * *
170332 TGGTTTCGCAGGA-AACGC-TTT-TTTCCCACAATTTT-TGTAAATTCTAAGTTCGTACCTTAAA
63 TGGTTTCGCAAGAGAA-GCTTTTCTTTGCCA-AATTTTCT-TAAAATCAAAGTTTGTACTTTAAA
* * *
170393 TGAGACAAGCATGGATTC-CAGT-AAGGATCTTCAT
125 TGAGACAAGCATTGATTCTC-GTAAAAG-TCTCCAT
* * * * *
170427 TCATTTCATGATTAGGCACTATAAACACATTCTCC-TCATTAAGATACATGATATTGATGGTTTT
1 TCTTTTCATGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATGATATTGATGCTTTG
* * ** * *
170491 CTTTTGCGTGAAAATCTTTTCTTTGCCAAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
65 GTTTCGCAAGAGAAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAG
*
170556 ACATGCATTGATTCTCGTAAAAGTCTCCAT
129 ACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * *
170586 TCTTTTCATGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTGATGCTTTAG
1 TCTTTTCATGATTAGGCACCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTGG
* * ** ** * * * *
170651 TCTCGCAAGAGAAGCTTTTCTTT-ACACCGTTATTAATAGAACCAAACTTTGT-CTCTTAAATAA
66 TTTCGCAAGAGAAGCTTTTCTTTGCCA-AATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATGA
* * * *
170714 GAC-AG-AGTTGAATACTCATACTAA-TC-CATAT
128 GACAAGCA-TTG-ATTCTCGTA-AAAGTCTC-CAT
* * * * * *
170745 TCGTTTT--TGGATTAGGCACCATAAACATAGTCTT-C-TAATAACGATACATGATAATGATGCA
1 TC-TTTTCAT-GATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACATGATATTGATGCT
* * * * ** * * ** * * *
170806 TTGGATTCAC-AG-GAAACATTTTGTTCCCCCCAA-TTT-TTGAGTTC--A---T-T-CCTCATA
62 TTGGTTTCGCAAGAGAAGC-TTTTCTT-TGCCAAATTTTCTTAAAATCAAAGTTTGTACTTTAAA
* * * * *
170860 TGAGAC-AGACATGGATTCTAGT-AAGGATCTTCTT
125 TGAGACAAG-CATTGATTCTCGTAAAAG-TCTCCAT
* ** * * * * *
170894 TCATTTCATGATTAGGCATTATAAACAC-TTTCTCCTCATTAGGATAAATGATATTAATGGTTTT
1 TCTTTTCATGATTAGGCACCATAAACACATTTC-CTTCATTAGGATACATGATATTGATGCTTTG
* * * **
170958 CTTTTGCAAG-GAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA
65 GTTTCGCAAGAG-AAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGA
* * *
171022 GACATGCATTGATTCTCATGAAAGTCTCCAT
128 GACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * * * * *
171053 TCCTTCCAAGATT-GGGATCCAAAAACACATTCCCTTCATTAGGATACACGACATTGATGCTTTG
1 TCTTTTCATGATTAGGCA-CCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTG
* * * * * * * * *
171117 GTGTCACAAGAGAGGCTTTTCTTT-CCAACGTTATCGATAAAATCAAAATTTGT-CTCTAAAATA
65 GTTTCGCAAGAGAAGCTTTTCTTTGCCAA-ATTTTC-TTAAAATCAAAGTTTGTACT-TTAAATG
* * * * *
171180 AGATAAAC-TTGAATACTCATACTAA-TC-CCAT
127 AGACAAGCATTG-ATTCTCGTA-AAAGTCTCCAT
* * ** * * * *
171211 TCTTTTCAAGATTAGGTACCAT-AA-ACATAGCCTTCTTATACGGATATAGGATATTGATGATTT
1 TCTTTTCATGATTAGGCACCATAAACACATTTCCTTCAT-TA-GGATACATGATATTGATGCTTT
** * * * * * *
171274 GGTTTTACAGGA-AACGC-TTT-TTTCCCACAATTTT-TGTAAATTCTAAGTTCGTACCTTAAAT
64 GGTTTCGCAAGAGAA-GCTTTTCTTTGCCA-AATTTTCT-TAAAATCAAAGTTTGTACTTTAAAT
* ** *
171335 GAGACAAGCATGGATTC-CAGT-ATGGATCTTCAT
126 GAGACAAGCATTGATTCTC-GTAAAAG-TCTCCAT
* * * * *
171368 TCATTTCATGATTAGGCACTATAAACACATTCTCC-TCATTAAGATACATGATATTGATGGTTTT
1 TCTTTTCATGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATGATATTGATGCTTTG
* * ** * * *
171432 CTTTTGCGTGAAAATCTTTTCTTTGCCAAATTTTCCTTAAAATCAAAGTTTGCACTTTAAATGAG
65 GTTTCGCAAGAGAAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATGAG
*
171497 ACATGCATTGATTCTCGTAAAAGTCTCCAT
129 ACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * *
171527 TCTTTTCATGATTGGGAACCA-AAAGCACATTTCCTTCATTAGGATACATGATAATGATGCTTTA
1 TCTTTTCATGATTAGGCACCATAAA-CACATTTCCTTCATTAGGATACATGATATTGATGCTTTG
* ** ** * * * *
171591 GTGTCGCAAGAGAAGCTTTTCTTT-CCACCGTTATTAATAGAACCAAA--CTGT-CTCTTAAATA
65 GTTTCGCAAGAGAAGCTTTTCTTTGCCA-AATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATG
* * * *
171652 AGAC-AG-AGTTGAATACTCATACTAA-TC-CATAT
127 AGACAAGCA-TTG-ATTCTCGTA-AAAGTCTC-CAT
* * * * *
171684 TCGTTTT--GGATTAGGCACCATAAACATAGTCTT-C-TAATAAGGATACATGATAATGATGCTT
1 TC-TTTTCATGATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACATGATATTGATGCTT
* ** * * ** * * *
171745 TGGATTCGCAAGA-AA-CATTTTCTTCCCCCCAA-TTT-TTGAGTTC--A---T-T-CCTCATAT
63 TGGTTTCGCAAGAGAAGC-TTTTCTT-TGCCAAATTTTCTTAAAATCAAAGTTTGTACTTTAAAT
* * * * *
171799 GAGAC-AGACATGGATTCTAGT-AAGGATCTTCTT
126 GAGACAAG-CATTGATTCTCGTAAAAG-TCTCCAT
* * ** * **** * * *
171832 TCATTTCATGATTACGCATTATAAACAC-TTTCTCCTCATTTCTTTCCAATGATATTAATGGTTT
1 TCTTTTCATGATTAGGCACCATAAACACATTTC-CTTCATTAGGATAC-ATGATATTGATGCTTT
** * * * *
171896 TCTTTTGCATG-GAAATCTTTTCTTTGCCACATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
64 GGTTTCGCAAGAG-AAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATG
* *
171960 AGACATGCATTGATTCTCATAAAAGTCTCCAT
127 AGACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * *
171992 TCTTTCCAAGATT-GGGATCCAAAAACACATTCCCTTCATTAGGATACATGATATTGATGCTTTG
1 TCTTTTCATGATTAGGCA-CCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTG
* ** * ** *
172056 GTGTCGCAAGAGAAGCTTTTCTTT-CCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAATT
65 GTTTCGCAAGAGAAGCTTTTCTTTGCCA-AATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATG
* * * * * *
172119 AAACAA-AAATGAATACTC--AAACTAATC-CCCT
127 AGACAAGCATTG-ATTCTCGTAAA--AGTCTCCAT
* * * * *
172150 TCTTTTCAGGATTAGGCACCATAAACATAGTCTT-C-TCATAAGGATACAGGATATTGATGATTT
1 TCTTTTCATGATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACATGATATTGATGCTTT
* * * * * * *
172213 GGTTTCGCAAGA-AACGCTTTTC--TCCCACCAGTTTT-TGTAAATTCTAAA-TTCGTGCCTCAA
64 GGTTTCGCAAGAGAA-GCTTTTCTTTGCCA--AATTTTCT-TAAAATC-AAAGTTTGTACTTTAA
* * * * * *
172273 ATGAGACAAACATGGACTCTAGT-AAGGATCTGCAT
124 ATGAGACAAGCATTGATTCTCGTAAAAG-TCTCCAT
* * * * * * *
172308 TCATTTCGTGATTAGGCACTATAAACAAATTCTCCTT-AATAGGATAAATGATATTGATGGATTT
1 TCTTTTCATGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATGATATTGAT-GCTTT
* * * * *** *
172372 -CTTTTGCATG-GAAATCTTTTCTTTGCCTTGTTTTCCTTAAAATCAAAGTTTGTATTTTAAATG
64 GGTTTCGCAAGAG-AAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATG
* *
172435 AGACATGCATTGATTGTCGTAAAAGTCTCCAT
127 AGACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * * * * *
172467 TCTTTTCAAGAAT-GAGAACCAAAAACACGTTTCTTTCATTAGGATACATGACATTGATACTTTG
1 TCTTTTCATGATTAG-GCACCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTG
** ** * **
172531 GTCTT-GCAAGAGAAGCTTTTCTTT-CCACCGTTATTAATAGAATCAAAGTTCAT-CTCTTAAAT
65 GT-TTCGCAAGAGAAGCTTTTCTTTGCCA-AATT-TTCTTAAAATCAAAGTTTGTACT-TTAAAT
* * * * *
172593 AAGACAAAC-TTGAATACTCATACTAA-TC-CACAT
126 GAGACAAGCATTG-ATTCTCGTA-AAAGTCTC-CAT
* * * * *
172626 TCTTTT-TTGGATTAGGCACCATAAACATAGTCTT-C-TCATAAGGATATATGATAATGATGCTT
1 TCTTTTCAT-GATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACATGATATTGATGCTT
* ** * * ** * * *
172688 TGGATTCGCAAGA-AA-CATTTTCTTCCCCCTAA-TTT-TTGAGTTC--A---T-T-CCTCACAT
63 TGGTTTCGCAAGAGAAGC-TTTTCTT-TGCCAAATTTTCTTAAAATCAAAGTTTGTACTTTAAAT
* * * * *
172742 GAGACAAACATGGATTCTAG-AAAGGATCTTC-T
126 GAGACAAGCATTGATTCTCGTAAAAG-TCTCCAT
* * * * ** * * * *
172774 TGCATTTCGTGTTTAGACATTATAAACAC-TTTCTCCTCATTAGGATAAATGATATTAATGGTTT
1 T-CTTTTCATGATTAGGCACCATAAACACATTTC-CTTCATTAGGATACATGATATTGATGCTTT
** * * * *
172838 TCTTTTGCATG-GAAATCTTTTCTTTGCCACATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
64 GGTTTCGCAAGAG-AAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATG
* *
172902 AGACATGCATTGATTCTCATAAAAGTCTCCAT
127 AGACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * *
172934 TCTTTCCAAGATT-GGGATCCAAAAACACATTCCCTTCATTAGGATACATGATATTGATGCTTTG
1 TCTTTTCATGATTAGGCA-CCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTG
* ** * ** *
172998 GTGTCGCAAGAGAAGCTTTTCTTT-CCACCGTTAATGATAAAATCAAAGTTTGT-CTCTTAAATT
65 GTTTCGCAAGAGAAGCTTTTCTTTGCCA-AATT-TTCTTAAAATCAAAGTTTGTACT-TTAAATG
* * * * * *
173061 AAACAA-AAATGAATACTC--AAACTAATC-CCCT
127 AGACAAGCATTG-ATTCTCGTAAA--AGTCTCCAT
* * * * *
173092 TCTTTTCAGGATTAGGCACCATAAACATAGTCTT-C-TCATAAGGATACAGGATATTGATGATTT
1 TCTTTTCATGATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACATGATATTGATGCTTT
* * * * * * * *
173155 GGTTTCGCAAGA-AACGCTTTTC--TCCCACCAGTTTT-TGTAAATTCTAAGTTCGTGCCTCAAA
64 GGTTTCGCAAGAGAA-GCTTTTCTTTGCCA--AATTTTCT-TAAAATCAAAGTTTGTACTTTAAA
* * * * * *
173216 TGAGACAAACATGGACTCTAGT-AAGGATCTGCAT
125 TGAGACAAGCATTGATTCTCGTAAAAG-TCTCCAT
* * * * * * *
173250 TCATTTCGTGATTAGGCACTATAAACAAATTCTCCTT-AATAGGATAAATGATATTGATGGATTT
1 TCTTTTCATGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATGATATTGAT-GCTTT
* * * * *** *
173314 -CTTTTGCATG-GAAATCTTTTCTTTGCCTTGTTTTCCTTAAAATCAAAGTTTGTATTTTAAATG
64 GGTTTCGCAAGAG-AAGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATG
* * *
173377 AGACATGCATTAATTGTCGTAAAAGTCTCCAT
127 AGACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * * * *
173409 TCTTTTCAAGAAT-GAGAACCAAAAACACATTTCTTTCATTAGGATACATGACATTGATACTTTG
1 TCTTTTCATGATTAG-GCACCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTG
** ** * **
173473 GTCTT-GCAAGAGAAGCTTTTCTTT-CCACCGTTATTAATAGAATCAAAGTTCAT-CTCTTAAAT
65 GT-TTCGCAAGAGAAGCTTTTCTTTGCCA-AATT-TTCTTAAAATCAAAGTTTGTACT-TTAAAT
* * * * *
173535 AAGACAAAC-TTGAATACTCATACTAA-TC-CACAT
126 GAGACAAGCATTG-ATTCTCGTA-AAAGTCTC-CAT
* * * * *
173568 TCTTTT-TTGGATTAGGCACCATAAACATAGTCTT-C-TCATAAGGATATATGATAATGATGCTT
1 TCTTTTCAT-GATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACATGATATTGATGCTT
* ** * * ** * * *
173630 TGGATTCGCAAGA-AA-CATTTTCTTCCCCCTAA-TTT-TTGAGTTC--A---T-T-CCTCACAT
63 TGGTTTCGCAAGAGAAGC-TTTTCTT-TGCCAAATTTTCTTAAAATCAAAGTTTGTACTTTAAAT
* * * * *
173684 GAGACAAACATGGATTCTAG-AAAGGATCTTC-T
126 GAGACAAGCATTGATTCTCGTAAAAG-TCTCCAT
* * * * ** * * * *
173716 TGCATTTCGTGTTTAGACATTATAAACAC-TTTCTCCTCATTAGGATAAATGATATTAATGGTTT
1 T-CTTTTCATGATTAGGCACCATAAACACATTTC-CTTCATTAGGATACATGATATTGATGCTTT
** * * * **
173780 TCTTTTGCATG-GACATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
64 GGTTTCGCAAGAGA-AGCTTTTCTTTGCCAAATTTT-CTTAAAATCAAAGTTTGTACTTTAAATG
* * *
173844 AGACATGCATTGATTCTCATAAAAGTCTCCAC
127 AGACAAGCATTGATTCTCGTAAAAGTCTCCAT
* * * * * * * * *
173876 TATTTCCAAGTTTCGG-ATCCAAAAACAC-TTTCTCTTCATTAGGATACATGACATTGACGGTTT
1 TCTTTTCATGATTAGGCA-CCATAAACACATTTC-CTTCATTAGGATACATGATATTGATGCTTT
* * ** * ** *
173939 GGTGTCACAAGAGAAGCTTTTCTTT-CCACCGTTAATGATAAAATCAAAGTTTAT-CTCTTAAAT
64 GGTTTCGCAAGAGAAGCTTTTCTTTGCCA-AATT-TTCTTAAAATCAAAGTTTGTACT-TTAAAT
* * * * * *
174002 AAGACAAACA-TGAATACTCATACTAA-TCCCCAT
126 GAGACAAGCATTG-ATTCTCGTA-AAAGTCTCCAT
* * * * *
174035 TCTTTTCAAGATTAGACACCATAAACATAGTCTT-C-TCATAAGGATGCATGATATTGATGCTTT
1 TCTTTTCATGATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACATGATATTGATGCTTT
* *
174098 GGATTCACAAGA
64 GGTTTCGCAAGA
174110 TACGCTTTCT
Statistics
Matches: 5248, Mismatches: 1523, Indels: 1112
0.67 0.19 0.14
Matches are distributed among these distances:
146 9 0.00
147 10 0.00
148 33 0.01
149 226 0.04
150 74 0.01
151 20 0.00
152 16 0.00
153 7 0.00
154 15 0.00
155 80 0.02
156 277 0.05
157 468 0.09
158 1295 0.25
159 2127 0.41
160 426 0.08
161 48 0.01
162 55 0.01
163 57 0.01
164 5 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (158 bp):
TCTTTTCATGATTAGGCACCATAAACACATTTCCTTCATTAGGATACATGATATTGATGCTTTGG
TTTCGCAAGAGAAGCTTTTCTTTGCCAAATTTTCTTAAAATCAAAGTTTGTACTTTAAATGAGAC
AAGCATTGATTCTCGTAAAAGTCTCCAT
Found at i:173018 original size:942 final size:941
Alignment explanation
Indices: 166587--174200 Score: 10417
Period size: 942 Copynumber: 8.1 Consensus size: 941
166577 TATTAATGCT
* * *
166587 GTGCCTCAAATGAGACAAGCATGGATTCCAGTAAGGATCTT--TTCA--T-G-G-TTAGGTACTA
1 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* *
166645 TAAACACATTCTCCTC-ATCAGAATACATGATATTGATGGTTTTCTTTTGCGTGGAAATCTTTTC
66 TAAACACATTCTCCTCAAT-AGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
*
166709 TTTGCCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
130 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
* * * *
166774 AGTCTCCATTCTTTTCATGATTGGGAACCAAAAGCACATTTCCTTCAATAGGATACATGACATTA
195 AGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTG
* * * ** ** * *
166839 ATGCTTTGGTGTCACAACAGAGGCTTTTCTTTCCAATGTTATCGATAAAATCAAAATTTGTCTCT
260 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTTGTCTCT
* * *
166904 TAAATAAGATAAACTTGAATACTCATACTAATCC-CATTGTTTTCAGGATTAGGCACCATAAACA
325 TAAATAAGACAAACTTGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACA
* * * * * * * * * * *
166968 TAGTCTTCTTATACGGATATAGGATATTGATGATTTGGTTTTGCGAGAAGCGCTTTT-TTCCCAC
390 TAGTCTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAAC-ATTTTCTTCCCCC
* * * *
167032 AATTTTTGTAAATTCTAAGTTCGTGCCTCGAATGAGACAAAGACGGATTCTAGTAAA-GATCTTC
454 AATTTTTG-AAGTTC--A--T--T-CCTCAAATGAGACAAACATGGATTCTAG-AAAGGATCTTC
* * *
167096 ATTCATTTCATGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGGTTT
510 -TTCATTTCATGATTAGGCATTATAAACACATTCTCCTCATTAGGATAAATGATATTAATGGTTT
* * * * *
167161 TCTTTTGCTTGCAAATCTTTTTTTTTTTTGCCTTATTTTCCTTAAAATCAGAGTTTGTACTTTAA
574 TCTTTTGCATGGAAATC----TTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAA
* *
167226 ATGAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACAT
635 ATGAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAACACAT
* * * *
167290 TCCCTGCATTAGCATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGT
700 TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGT
* * *
167355 T-ATCGATATAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATT
765 TAAT-GATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCATT
* * * * *
167419 CTTTTCAGGATTAGGCACCATAAACAAAGTCTTCTTATACGGATGCATGATATTGATGATTTGGT
829 CTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGT
* *
167484 TTCGCAAGAAATGCTTTTTTCCCA-AAATTTTTGTAAATTCTAAGTTC
894 TTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
* * *
167531 ATGCCTCAAAAGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCACTA
1 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* *
167596 TAAACACATTCTCCTCATTAGGATACATGATATTGATTGTTTTCTTTTGCATGGAAATCTTTTCT
66 TAAACACATTCTCCTCAATAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* *
167661 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTCATTCTTGTAAAA
131 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
* * *
167726 GTCTCCATTCTATTT-AAGATTGGGAACCAAAATCCCA-TTCTTTCATTAGGATACATGACATTG
196 GTCTCCATTCT-TTTCAAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTG
* * ** *
167789 ATGCTTTGGTGTCGTAAGAGAAGCTTGTCTTTCCACCGTTATCGATAGAATCAAAATTTGTCTCT
260 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTTGTCTCT
* * *
167854 TAAATAAGACAAACATGAATACTCACACTAATCCACATTCTTTACTGGATTAGGCACCATAAACA
325 TAAATAAGACAAACTTGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACA
* * * * * ** *
167919 TCA-TCTTCTCATAAAGATAAATGATATTCATGCTTTGGTTTCGCAAGAAACGCTTTCTTTCCAC
390 T-AGTCTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAACATTTTC-TTCCCC
* * *
167983 CAATTTTTGTAAAGTATAAGTTCATTCCTCAAATTAGACAAACATGGATTATAGCAAGGATCTTC
453 CAA-TTTT-T---G---AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGAAAGGATCTTC
** * * * * *
168048 ATTCATTTTGTGATTAGACACTATAAACACATTCTCCTTATTAGGATAAATTATATTGATGGTTT
510 -TTCATTTCATGATTAGGCATTATAAACACATTCTCCTCATTAGGATAAATGATATTAATGGTTT
* *
168113 TCTTTTGCATGGAAATCTTTTCTTTGCGAT-ATTTTCCTTAAAATCAAAGTTTGCACTTTAAATG
574 TCTTTTGCATGGAAATCTTTTCTTTGC-CTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
* * * * * *
168177 ATA-ATGCATTGATTCTCGTAAAAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACTCATTCC
638 AGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAACACATTCC
* * * * *
168241 CTTCATTAGGATACATGACATTGAAGCTTCGGTGTCGCAAGAGAAGCTGTTCTTTCCACGGTTAT
703 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAA
* * *
168306 TGATAGAATCAAAGTTTGTTTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTCTT
768 TGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCC-CATTCTT
* * * * * * *
168371 TTCTGGATTAGGGACCATAAACTTGGTCTTCTCATAAGGATACATGATATTGATGCTTTTGTTTC
832 TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * *
168436 GTAAGAAACGCTTTTTGCCCACCAATTTTTGTAAAGTATAAGTTC
897 GCAAGAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
* * * * * * *
168481 ACT-TCTCAAATGAGACAAACATAGATTCTAGTAAAGATCTTCATTCGTTTCCTGATTAGGCTCT
1 -GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT
* *
168545 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
65 ATAAACACATTCTCCTCAATAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* * * *
168610 CTTGCCTAATTTTCCTTAAAACCAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCTCGTAAA
130 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
* * * * ***
168675 AGTCTCCATTCTTTCCAAGATTAGGATCCAAGAACTTGTTTCCTTCATTAGGATACATGACATTG
195 AGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTG
* * * *
168740 ATGCTTTGGTGTCGCAAGACAAGCTTTTCTTTCCACCGTTAGTGATAAAATCAAAGTTTTGTCTC
260 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAG-TTTGTCTC
* * * *
168805 TTAAATAAGACAAACATGGATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAAC
324 TTAAATAAGACAAACTTGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAAC
* * * * *
168870 ATAGTCTTCTCGTAAGGATACTA-GATATTGATGATTTGGTTTAGCAAGAAACGATTTT-TTCCC
389 ATAGTCTTCTCATAAGGATA-TATGATAATGATGCTTTGGATTCGCAAGAAAC-ATTTTCTTCCC
* *
168933 TCCAATTTTTGTAAATTCTAAGTTCGTACCTCAAATGAGACAAACATAGATTCTAGTAAA-GATC
452 -CCAATTTTTG-AAGTTC--A--T--T-CCTCAAATGAGACAAACATGGATTCTAG-AAAGGATC
* ** * * *
168997 TTCATTCGTTTCATGATTAGGCACCATAAACGCATTCTCCTCATTAGGATAAATGATATTGATTG
507 TTC-TTCATTTCATGATTAGGCATTATAAACACATTCTCCTCATTAGGATAAATGATATTAATGG
* * *
169062 TTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAACCAAAGTTTATACTTTAAA
571 TTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAA
* * *
169127 TGAGACATGCATTGATTCTCATAAAAGTCCCCATTCTTTCCAAGATTAGGATCCAAAAACTCATT
636 TGAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAACACATT
* *
169192 TCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTTTTTCCACCGTT
701 CCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTT
* * *
169257 ATTGATAAAATCAAAGTTTGTCTCTTAAACAAGACAAACATGGATACTCATACTAATCCCCATTC
766 AATGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT-CCCATTC
* *
169322 TTTTTCAGGATTAGGCACCATAAACATAGTGTTCTCATAAGGATACTGGATATTGATGATTTGGT
830 -TTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGT
* * *
169387 TTAGCAAGAAACGGTTTTTTCCCTCCAATTTTTGTAAATTCTAAGTTC
894 TTCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
* * *
169435 ATGCCTCAAATGAG---ATCATGGATTCTAGTAAGTATCTTCATTCATTTCGTGATTAGGCACTA
1 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * * *
169497 TAAACACAATCTCCTC-ATCACGATACATGATATTGATGGTTTCCTTTTGCATGGAAACCTTTTC
66 TAAACACATTCTCCTCAAT-AGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* * * * * *
169561 CTTCCCTTATTTTCCTTAAAATCAAAGTTTGCACTTTAAATGAGACATCCATTGATTCTTGCAAA
130 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
* * **
169626 AGTCTCCATTCGTTTT-AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACACGATGTT
195 AGTCTCCATTC-TTTTCAAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATT
** * * ** * *
169690 GACACTTTGGTGTCACAAGAGAAGCTTGTCCATCCACCATTATTGATAGAATCAAAGTTTGTCTC
259 GATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTTGTCTC
* * *
169755 TTAAATAAGACAAACATGAATACTCAATACTAATCCACATTCTTTTCTAGATTAGGCACCGTAAA
324 TTAAATAAGACAAACTTGAATACTC-ATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAA
** * * * * **
169820 CATAGTCTTCTTGTAAGGATAAATGATATTGATGCTTTGGTTTGGCAAGAAACGCTTTCTTCCCC
388 CATAGTCTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAACATTTTCTT-CCC
* * * *
169885 CCAATTTTTGTAAAGTACAAGTTCATTCCGCAAATTAGACAAACAGGGATTCTAGTAAGGATCTT
452 CCAA-TTTT-T---G---AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGAAAGGATCTT
* * * *
169950 CATACATTTCGTGATTAGGCACTT-TAAACACATTCTCCTCATTAGGATAAATAATATTGATGGT
509 C-TTCATTTCATGATTAGGCA-TTATAAACACATTCTCCTCATTAGGATAAATGATATTAATGGT
* *
170014 TTTCTTTTGCAT-GAATATCTTTTCTTTGCCCCATTTTCCTTAAAATCAAAGTTTGTACATTAAA
572 TTTCTTTTGCATGGAA-ATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAA
* *
170078 TGAGACATGCATTGATTCTCATGAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAATACATT
636 TGAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAACACATT
* * *
170143 CCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAGGCTTTTCTTTCCAACGTT
701 CCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTT
* * * * *
170208 -ATCGATAAAATTAAAATTTGTCTCTTAAATAAGATAAACTTGAATACTCATACTAATCCTATTC
766 AAT-GATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCATTC
* * * *
170272 TTTTCAGGATTAGGTACCATAAACATAGTCTTCTTATACGGATATAGGATATTGATGATTTGGTT
830 TTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
*
170337 TCGCAGGAAACGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTC
895 TCGCAAGAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
* * * * *
170383 GTACCTTAAATGAGACAAGCATGGATTCCAGTAAGGATCTTCATTCATTTCATGATTAGGCACTA
1 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * * *
170448 TAAACACATTCTCCTCATTAAGATACATGATATTGATGGTTTTCTTTTGCGTGAAAATCTTTTCT
66 TAAACACATTCTCCTCAATAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
**
170513 TTGCCAAATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
131 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
*
170578 GTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTGA
196 GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTGA
* * * * *
170643 TGCTTTAGTCTCGCAAGAGAAGCTTTTCTTTACACCGTTATTAATAGAACCAAACTTTGTCTCTT
261 TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTTGTCTCTT
* * *
170708 AAATAAGACAGAGTTGAATACTCATACTAATCCATATTCGTTTT-TGGATTAGGCACCATAAACA
326 AAATAAGACAAACTTGAATACTCATACTAATCCACATTC-TTTTCTGGATTAGGCACCATAAACA
* * * * * * *
170772 TAGTCTTCTAATAACGATACATGATAATGATGCATTGGATTCACAGGAAACATTTTGTTCCCCCC
390 TAGTCTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAACATTTTCTT-CCCCC
* * *
170837 AATTTTTG-AGTTCATTCCTCATATGAGACAGACATGGATTCTAGTAAGGATCTTCTTTCATTTC
454 AATTTTTGAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGAAAGGATCTTC-TTCATTTC
*
170901 ATGATTAGGCATTATAAACACTTTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCA
518 ATGATTAGGCATTATAAACACATTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCA
*
170966 AGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
583 TGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
* *
171031 TGATTCTCATGAAAGTCTCCATTCCTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGG
648 TGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGG
* * * *
171096 ATACACGACATTGATGCTTTGGTGTCACAAGAGAGGCTTTTCTTTCCAACGTT-ATCGATAAAAT
713 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAAT-GATAAAAT
* * * * *
171160 CAAAATTTGTCTCTAAAATAAGATAAACTTGAATACTCATACTAATCCCATTCTTTTCAAGATTA
777 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCATTCTTTTCAGGATTA
* * * * * ** *
171225 GGTACCATAAACATAGCCTTCTTATACGGATATAGGATATTGATGATTTGGTTTTACAGGAAACG
842 GGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACG
171290 CTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTC
907 CTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
* * * * * *
171324 GTACCTTAAATGAGACAAGCATGGATTCCAGTATGGATCTTCATTCATTTCATGATTAGGCACTA
1 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * * *
171389 TAAACACATTCTCCTCATTAAGATACATGATATTGATGGTTTTCTTTTGCGTGAAAATCTTTTCT
66 TAAACACATTCTCCTCAATAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
** *
171454 TTGCCAAATTTTCCTTAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCGTAAAA
131 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
* * * *
171519 GTCTCCATTCTTTTCATGATTGGGAACCAAAAGCACATTTCCTTCATTAGGATACATGATAATGA
196 GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTGA
* * *
171584 TGCTTTAGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAACCAAA--CTGTCTCTT
261 TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTTGTCTCTT
* * * *
171647 AAATAAGACAGAGTTGAATACTCATACTAATCCATATTCGTTT-TGGATTAGGCACCATAAACAT
326 AAATAAGACAAACTTGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACAT
* *
171711 AGTCTTCTAATAAGGATACATGATAATGATGCTTTGGATTCGCAAGAAACATTTTCTTCCCCCCA
391 AGTCTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAACATTTTCTT-CCCCCA
* * *
171776 ATTTTTG-AGTTCATTCCTCATATGAGACAGACATGGATTCTAGTAAGGATCTTCTTTCATTTCA
455 ATTTTTGAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGAAAGGATCTTC-TTCATTTCA
* * **** *
171840 TGATTACGCATTATAAACACTTTCTCCTCATTTCTTTCCAATGATATTAATGGTTTTCTTTTGCA
519 TGATTAGGCATTATAAACACATTCTCCTCATTAGGAT-AAATGATATTAATGGTTTTCTTTTGCA
*
171905 TGGAAATCTTTTCTTTGCCACATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
583 TGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCAT
171970 TGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGG
648 TGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGG
*
172035 ATACATGATATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATC
713 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATC
* * *
172100 AAAGTTTGTCTCTTAAATTAA-ACAAAAATGAATACTCAAACTAATCCCCTTCTTTTCAGGATTA
778 AAAGTTTGTCTCTTAAA-TAAGACAAACATGAATACTCATACTAATCCCATTCTTTTCAGGATTA
172164 GGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACG
842 GGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACG
* * *
172229 CTTTTCTCCCACCAGTTTTTGTAAATTCTAAATTC
907 CTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
* *
172264 GTGCCTCAAATGAGACAAACATGGACTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTA
1 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * * *
172329 TAAACAAATTCTCCTTAATAGGATAAATGATATTGATGGATTTCTTTTGCATGGAAATCTTTTCT
66 TAAACACATTCTCCTCAATAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * *
172394 TTGCCTTGTTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGACATGCATTGATTGTCGTAAAA
131 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
* * * *
172459 GTCTCCATTCTTTTCAAGAATGAGAACCAAAAACACGTTTCTTTCATTAGGATACATGACATTGA
196 GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTGA
* * * **
172524 TACTTTGGTCTTGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTCATCTCTT
261 TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTTGTCTCTT
*
172589 AAATAAGACAAACTTGAATACTCATACTAATCCACATTCTTTTTTGGATTAGGCACCATAAACAT
326 AAATAAGACAAACTTGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACAT
172654 AGTCTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAACATTTTCTTCCCCCTA
391 AGTCTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAACATTTTCTTCCCCC-A
* *
172719 ATTTTTG-AGTTCATTCCTCACATGAGACAAACATGGATTCTAGAAAGGATCTTCTTGCATTTCG
455 ATTTTTGAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGAAAGGATCTTCTT-CATTTCA
* * *
172783 TGTTTAGACATTATAAACACTTTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCAT
519 TGATTAGGCATTATAAACACATTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCAT
*
172848 GGAAATCTTTTCTTTGCCACATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
584 GGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
172913 GATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGGA
649 GATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGGA
*
172978 TACATGATATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCA
714 TACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCA
* * *
173043 AAGTTTGTCTCTTAAATTAA-ACAAAAATGAATACTCAAACTAATCCCCTTCTTTTCAGGATTAG
779 AAGTTTGTCTCTTAAA-TAAGACAAACATGAATACTCATACTAATCCCATTCTTTTCAGGATTAG
173107 GCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGC
843 GCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGC
* *
173172 TTTTCTCCCACCAGTTTTTGTAAATTCTAAGTTC
908 TTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
* *
173206 GTGCCTCAAATGAGACAAACATGGACTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTA
1 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * * *
173271 TAAACAAATTCTCCTTAATAGGATAAATGATATTGATGGATTTCTTTTGCATGGAAATCTTTTCT
66 TAAACACATTCTCCTCAATAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * * *
173336 TTGCCTTGTTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGACATGCATTAATTGTCGTAAAA
131 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
* * *
173401 GTCTCCATTCTTTTCAAGAATGAGAACCAAAAACACATTTCTTTCATTAGGATACATGACATTGA
196 GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTGA
* * * **
173466 TACTTTGGTCTTGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTCATCTCTT
261 TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTTGTCTCTT
*
173531 AAATAAGACAAACTTGAATACTCATACTAATCCACATTCTTTTTTGGATTAGGCACCATAAACAT
326 AAATAAGACAAACTTGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACAT
173596 AGTCTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAACATTTTCTTCCCCCTA
391 AGTCTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAACATTTTCTTCCCCC-A
* *
173661 ATTTTTG-AGTTCATTCCTCACATGAGACAAACATGGATTCTAGAAAGGATCTTCTTGCATTTCG
455 ATTTTTGAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGAAAGGATCTTCTT-CATTTCA
* * *
173725 TGTTTAGACATTATAAACACTTTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCAT
519 TGATTAGGCATTATAAACACATTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCAT
*
173790 GGACATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
584 GGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
* * * * * *
173855 GATTCTCATAAAAGTCTCCACTATTTCCAAGTTTCGGATCCAAAAACACTTTCTCTTCATTAGGA
649 GATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGGA
* * *
173920 TACATGACATTGACGGTTTGGTGTCACAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCA
714 TACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCA
* *
173985 AAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAGATTAG
779 AAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT-CCCATTCTTTTCAGGATTAG
* * * * * * *
174050 ACACCATAAACATAGTCTTCTCATAAGGATGCATGATATTGATGCTTTGGATTCACAAGATACGC
843 GCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGC
* * * * *
174115 TTTCTT-CCACCAATTTGTGTAAAGTATGAGTTC
908 TTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
* *
174148 ATTG-CTCAAATGAGACAAACATGGATTCTTA-TAGGGATCTTCATTCATTTCGT
1 -GTGCCTCAAATGAGACAAACATGGATTC-TAGTAAGGATCTTCATTCATTTCGT
174201 ATGAGTATAC
Statistics
Matches: 6062, Mismatches: 523, Indels: 172
0.90 0.08 0.03
Matches are distributed among these distances:
938 180 0.03
939 375 0.06
940 307 0.05
941 758 0.13
942 1306 0.22
943 249 0.04
944 36 0.01
945 7 0.00
946 4 0.00
947 48 0.01
948 196 0.03
949 168 0.03
950 480 0.08
951 1248 0.21
952 392 0.06
953 182 0.03
954 110 0.02
955 1 0.00
956 2 0.00
957 2 0.00
958 5 0.00
959 6 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (941 bp):
GTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
TAAACACATTCTCCTCAATAGGATACATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTGA
TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTAATAGAATCAAAGTTTGTCTCTT
AAATAAGACAAACTTGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCATAAACAT
AGTCTTCTCATAAGGATATATGATAATGATGCTTTGGATTCGCAAGAAACATTTTCTTCCCCCAA
TTTTTGAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGAAAGGATCTTCTTCATTTCATG
ATTAGGCATTATAAACACATTCTCCTCATTAGGATAAATGATATTAATGGTTTTCTTTTGCATGG
AAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGA
TTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGATCCAAAAACACATTCCCTTCATTAGGATA
CATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAA
GTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCATTCTTTTCAGGATTAGGCA
CCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGCTTT
TTTCCCACCAATTTTTGTAAATTCTAAGTTC
Found at i:176945 original size:471 final size:471
Alignment explanation
Indices: 174207--187906 Score: 5058
Period size: 475 Copynumber: 29.0 Consensus size: 471
174197 TCGTATGAGT
* * * **
174207 ATACATGACATTGATGCTTTGGTGTCACAAGAGTA-GCTTTTTTTTCCACCGTTAAAGATAAAAT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAG-AGGCTTTTCTTTCCAACGTTATCGATAAAAT
* * * * *
174271 CAAAGTTTGTCTCTTAAATAAGACAAACATGGATAATCATACTAATCCCCATT-CTTTTTAGGAT
65 CAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAAT-CCCATTCCTTTCT-GGAT
* * * * * *
174335 TAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATAGTGATGCTTTGGTTTCGCAAGAAA
128 TAGGCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAA
* * * *
174400 CACTTTCTTCCCACCAATTTTTGAAAATTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTC
191 CGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTC
* ** * *
174465 TTGTAGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTGCTCTTTAGGATAAAT
255 TAGTAAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAAT
* * * *
174530 GATATTGATGGCTTTCTTTTGCATGGAAATCTTTTCATTACCTTATTTTCCTTAAAATCAAAGTT
320 GATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
* * * *
174595 CGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGCCTCCATTTTTTTCAAGATTGGGAACC
385 TGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACC
174660 AAAAACACATTTCCTTCATTAGG
450 AAAAACACA-TTCCTTCATTAGG
* * * * * * *
174683 ATACATGGCATTCAAGCTTTGGCGTCGCAAGAGAGGCGTTTCTTTTCAACGTTATTGATAAAATC
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
* * * * *
174748 AAAATTTGTCTCCTAAATAAGATAAACTTGAATACTCATACTAAT-CCATTCTTTTCAGGATCAG
66 AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATTCCTTTCTGGATTAG
* * * * *
174812 GCACCATAAACATTGTTTTCTTATACGGATATAGGATATTGATGATTTGGTTTGGCGAGAAATGC
131 GCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGC
* * *
174877 TTTTTTCCCAAAATTTTTCTAAATTCTAAGTTCGTGCCTCAAATGAGATAAACATGGATTCTAGT
194 TTTTTTCCCACAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* *
174942 AAAGATCTTCATTTATTTCGTGATTAGGCACTTTAAACACATTCTCCTCATTAGGATAAATGATA
259 AAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
* * *
175007 TTGATGGTTTTATTTTGCTTGGAAATCTATTCTTTGCCTTTTTTTCCTTAAAATCAAAGTTTGTA
324 TTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * *
175072 CTTCAAATAAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA-TAGGAACC-AAA
389 CTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
175135 ACACATTCCCTTCATTAGG
454 ACACATT-CCTTCATTAGG
*
175154 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCACCGTTATCGATAAAATC
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
* *
175219 AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATTCTTTTCAGGATTAG
66 AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATTCCTTTCTGGATTAG
* * * * *
175284 GCTCCATAAACAAAGTCTTCTTATACGGATGCAGGATATTGATGATTTGGTTTCGCAAGAAGCAC
131 GCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGC
* *
175349 TTTTTCCCCACAATTTTTGTAAATTCTAAGTTTGTGCCTCAAAT--GACAAACATGGATTCTAGT
194 TTTTTTCCCACAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * *
175412 AAAGATCTTAATTCATTTCGTTATTAGGCACTATAAACACATTCTCCCCACTACGATACATGATA
259 AAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
* * * *
175477 TTGATGGCTTTCTCTTGCATGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTA
324 TTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* *
175542 CTTTAAATGAGACATGCATTGATTATCGTAAAAGTCTCCATTCTTTTCAAGATTCGGAACCAAAA
389 CTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
*
175607 ACACAATCCCTGT-ATTAGG
454 ACAC-ATTCCT-TCATTAGG
*
175626 ATACATGACATTCATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATC-AGTAAAAT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGA-TAAAAT
* * * * *
175690 CAAAATTTATCTCTTAAATAAAACAAACTTCAACACTCATACTAATCCCGTT-CTTT-TAGGATT
65 CAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATTCCTTTCT-GGATT
* * * * * *
175753 AGGCACCATAAACAAAGTCTTCTTTTACGGATGCAGGATATTGATAATTTGGTTTCACAAGAAAT
129 AGGCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAAC
* *
175818 GCTTTTTTTCCACAATTTTTGTAAATTCTAAGTTCGTACCTCAAATGAGACAAACATGGATTCTA
192 GCTTTTTTCCCACAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
* * * *
175883 GTAAAGATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTCTCCTCATTAGGTTAAATGG
257 GTAAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGA
* * * * * **
175948 TATTAATTGTTTTCCTTTGCTCGAAAATCTTTTCTTTGCCTTATTTTCAATAAAATCAAAGTTTG
322 TATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTG
* * * * * * * *
176013 TTCTTTAAATAAGACATGCAATGATTCTCTTAAAAGTCCCCATTCTTTCCTAA-ATTAGGATCCA
387 TACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC-AAGATTGGGAACCA
* *
176077 AAAACTCATTTCCTTCAATAGG
451 AAAACACA-TTCCTTCATTAGG
* * * * ** *
176099 ATACATGACATTGATTCTTTGGTGCCGCAAGAGAAGCTTTT-TTTCCACCGTTAAGGATAAAACC
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
* * * *
176163 AAAGTTTGTCTATTAAATAAGACAAACATGAATACTCATACTAATCCCCATT-CTTTTTAGGATT
66 AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAAT-CCCATTCCTTTCT-GGATT
* ** * * *
176227 AGGCACCATAAACATAGTCTTCTCATAAAGATACATGATAATGATGCTTTGGTTTCGCAAGAAAC
129 AGGCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAAC
* * * *
176292 ACTTTCTTCCCACCAATTTTTGTAAATTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCA
192 GCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* * * * *
176357 AGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACGCATTCTGCTCTTTAGGATAAACG
256 AGTAAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* * *
176422 ATATTGATTGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
321 ATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
* * *
176487 GTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTCCCCATTCTTTTCAAGATTGGGAACCA
386 GTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCA
* *
176552 AAAAAACATTCACTGCATTAGG
451 AAAACACATTC-CTTCATTAGG
* *
176574 ATACATGACATTGATGCTTTAGTGTCGCAAGAGAGGCTTTTCTTTCCAATGTTATCGATAAAATC
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
* *
176639 AAAATTTGTCTCTAAAATAAGACAAACTTGAATACTCATACTAATCCCATTCCTTTCTGGTTTAG
66 AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATTCCTTTCTGGATTAG
* * * *
176704 GTACCATAAACAAAG-TCTTATACGGATGCAAGATATTGATGATTTGGTTTCGCAAGAAACGCTT
131 GCACCATAAACATAGTTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGCTT
* *
176768 TTTTCCCACAATTTTTGTAAATTCTAAGTTTGTGCCTCAAATGAAACAAACATGGATTCTAGTAA
196 TTTTCCCACAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * *
176833 AGATCTTCATTTATTTCATGATTTGGCACTATAAACACATTCTCCTCAATAAGATAAATGATATT
261 AGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATT
*
176898 GACGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
326 GATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * *
176963 TTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTATTTTCAAGATTGGGAATCGAAAAC
391 TTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
177028 ACATTTCCTTCATTAGG
456 ACA-TTCCTTCATTAGG
* * * *
177045 ATACATGACATTCATGCTTTGGTGTTGCAAGAGAGGCTTTTCTTTCCAATGTTATTGATAAAATC
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
* * * *
177110 AAAATTTGTCTCTTAAATAAGATAAACTTTAATACTCATACTAATCCCATTCTTTTCAGGATTAG
66 AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATTCCTTTCTGGATTAG
* * * * * *
177175 GCACCATAAACATTGTTTTCTTATACGGATATAGGATATTGATGATTTGGTTTTGCGAGAAATGT
131 GCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGC
* * *
177240 TTTTTTCCCAAAATTTTTCTAAATTTTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
194 TTTTTTCCCACAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
*
177305 AAAGATCTTCATTCATTTCGTGATTAGGCACTTTAAACACATTCTCCTCATTAGGATAAATGATA
259 AAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
* *
177370 TTGATGGTTTTCTTTTGCTTGGAAATATATTCTTTGCCTTATTTT-CTTCAAAATCAAAGTTTGT
324 TTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTT-AAAATCAAAGTTTGT
*
177434 ACTTCAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA
388 ACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA
* **
177499 TACACATTCCCCGCATTAGG
453 AACACATT-CCTTCATTAGG
* * * ** * * * *
177519 ATACATGACATTGATGCTTTGGTGTTGCATG-CA--CTTTT-TCCCCATA-ATTTTTG-TAAATT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCA-ACGTTATCGATAAAAT
* * * * * * * * * * *
177578 CTAAGTTAGTGC-CTCAAATGAGACAAACATGGAT--TCAAGTAATGATCTTCATTCATTTC-GT
65 CAAAATTTGT-CTCTTAAATAAGACAAACTTGAATACTC-A-TACTAATC-CCATTCCTTTCTG-
* * * * * *
177639 GATTAGGCACTATAAACACA-TTCTCCTCACTA-AGATACATGATATTGATGGCTTT--TTCTTG
125 GATTAGGCACCATAAACATAGTTCT--T-A-TACGGATACAGGATATTGAT-GATTTGGTT-TCG
* * ** ** ** * * * * *
177700 CATGGAATTCTTTTCTTTGTC-TTATTTTCCT-TAAA-TCAAAGTTTGTACTTTAAATGAGACAA
184 CAAGAAACGC-TTT-TTTCCCACAATTTT--TGTAAATTCTAAGTTCGTGCCTCAAATGAGACAA
* * * * * ** * * * * * *
177762 GCATTGATTCTCGTAAA-AGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAAACATTC-ACTAC
245 ACATGGATTCTAGTAAAGA-TCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-C
* * * * ** * * ** ** *
177825 ATTACGATACATGACATTGATGCTTTGGTGTCGC-AAGAGAGGCTTTTCTTT-CC-AATGTTATC
308 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGGA-AATCTTTTCTTTGCCTTAT-TT-TC
** * * ** * * *
177887 GATAAAATCAAAATTTGT-CTCTTAAATAAGACAAAC-TTGAATACTCATACTAA-TC-CCATTC
370 CTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATTC
* * * * * * * * *
177948 CTTTCAGGTTTAGGTACCATAAACAAAGT-CTTCTTATACGG
432 TTTTCAAGATTGGGAACCAAAAACACATTCCTTCAT-TA-GG
* * * * * * * * * ** *
177989 ATGCAGGATATTGATGATTTGGTTTAC-CAAGA-A-ACGTTT-TTTCCCACAATT-TTTATAAAT
1 ATACATGACATTGATGCTTTGGTGT-CGCAAGAGAGGCTTTTCTTTCCAAC-GTTATCGATAAAA
* * * * * * *
178049 TCTAAATTCGTGC-CTTAAATGAGACAAACATTG-ATTCT-AGTA-AAGATCTTCATTCATTTC-
64 TCAAAATTTGT-CTCTTAAATAAGACAAAC-TTGAATACTCA-TACTA-ATC-CCATTCCTTTCT
* * * * * * *
178109 GTAATTAGGCACTATAAACACA-TTCTCCTCATTA-GGATACATGATATTGATGGCTTT--CTCC
124 G-GATTAGGCACCATAAACATAGTTCT--T-A-TACGGATACAGGATATTGAT-GATTTGGTTTC
* * * ** * ** * * * *
178170 TGCATGGAAATC-TTTTCTTTGCC-TTATTTTCCT-TAAAATGAAAGTTTGTACATTAAATGAGA
183 -GCA-AGAAA-CGCTTT-TTTCCCACAATTTT--TGTAAATTCTAAGTTCGTGCCTCAAATGAGA
** * * * * ** * * *
178232 CATGCATTGATTCTTGTAAA-AGTCTCCATTCTTTTAATGATTGGGAACCA-AAAGCACATT-TC
242 CAAACATGGATTCTAGTAAAGA-TCTTCATTCATTTCGTGATTAGGCACTATAAA-CACATTCTC
* * * * ** * ** ** * * * *
178294 CTTTATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTGTTTCCACCGTTA-
305 C-TCATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTT--GCC-TTAT
* ** * ** * * *
178358 -AT-GATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATACTCAG-ACTAA-TCCC
366 TTTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTC-GTA-AAAGTCTC
* * * * * * * *
178417 CATTCTTTTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGG
427 CATTCTTTTCAAGATTGGGAACCAAAAACACATTCCT-TCATTAGG
* * * * * * * * *
178463 ATAAAGGATATTGATGATTTGGTTTTGCAAGAAAGGC-TTT-TTTCCCACTAGTTTTTC--TAAA
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAAC--G-TTATCGATAAA
* * * * * * ** * * *** * *
178524 TTCTAAGTTCGTGC-CTTAAATGAGATAAAGATGGATTCT-AGTAAGGATCTACATTCATTTCAT
63 ATCAAAATTTGT-CTCTTAAATAAGACAAACTTGAATACTCA-TACTAATC-CCATTCCTTTC-T
* * * * * * ** *
178587 -GATTAGGCACTATAAACACAATCTCTTCAATA-GGATAAATGATATTGATGGTTTTCTTTCCCA
124 GGATTAGGCACCATAAACATAGT-TCTT--ATACGGATACAGGATATTGATGATTTGGTTT--CG
** * ** * * * *** *
178650 CAATTTTGCATGGAAATCTTTTCTTTGCC-TTATTTTCCT-TAAAATCAAAGTTTGTATTTTAAA
184 CAA----G-A---AACGC-TTT-TTTCCCACAATTTT--TGTAAATTCTAAGTTCGTGCCTCAAA
* ** * * * * * * *
178713 TGTGACATGCATAGATTCTCGTAAA-AGTC-TCTATTCTTTTCATGATT-GAGAACCAAAAACAC
237 TGAGACAAACATGGATTCTAGTAAAGA-TCTTC-ATTCATTTCGTGATTAG-GCACTATAAACAC
* * * *** ** * ** * * *
178775 ATTC-CTTTCATTAGGATACATGACATTGACACTTTGGTCTTGC-AAGAGAAGCTTTTGTTTCCA
299 ATTCTC-CTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGGA-AATCTTTTCTTT--G
** * * * ** * * *
178838 CCGTTA--TT-AATAGAATCAAAGTTTGT-CTCCTAAATAAGACAAACA-TGAATACTCTTACTA
360 CC-TTATTTTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCGTA-AA
* * * * *** * *
178898 A-TC-CACATTCTTTTCAGGATTAGGCACCATAAACATGGTCTTCTCATAAGG
421 AGTCTC-CATTCTTTTCAAGATTGGGAACCAAAAACACATTCCT-TCATTAGG
* * * * * * * * *
178949 ATACATGATATTGATGCTATGGTTTCGCGAGATATGC-TTTCCTTCCAACCAATT-T-GTGTAAA
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAA-C-GTTATCG-ATAAA
* * * ** * * * * ** *** * * *
179011 GT-ATGAGTTCAT-TGCTCAAATAAGACAAACATGGATTCTTGTAGGGATCTTCACTCATTTC-G
63 ATCA-AAATTTGTCT-CTTAAATAAGACAAACTTGAATACTCATACTAATC-CCATTCCTTTCTG
* * * * * * ** *
179073 TCATTAGGCACTATAAACACA-TTCTGCCCTTTA-GGATAAATGATATTGAT-AGTTTTCTTTTG
125 -GATTAGGCACCATAAACATAGTTCT----TATACGGATACAGGATATTGATGA-TTTGGTTTCG
* * * ** ** * * * * * * *
179135 CATGGAAA-TCTTTTCCTTGCC-TTATTTTCCT-TAAAAGCAAAGTTTGTACTTTATATGATACA
184 CA-AGAAACGCTTTT--TTCCCACAATTTT--TGTAAATTCTAAGTTCGTGCCTCAAATGAGACA
** * * * * * *** * * * *
179197 TGCATTGATTCTCGTAAA-AGTCTCCGTT-TTTTTAAGATTGGGAACCAAAAACACATTC-CCTT
244 AACATGGATTCTAGTAAAGA-TCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC-T
* ** * * ** * * ** ** * *
179259 CTTTAGGATTCATGACATTGATGCTTTGGTGTCGC-AAGAGAGGCTTTTATTT-CC-AATGTTAT
307 CATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGGA-AATCTTTTCTTTGCCTTAT-TT-T
** * * * * ** * * * *
179321 CGATAAAATCAAAATTTG-CCTCTTAAATAAGATAAACA-TGAATACTCATACTAA-TCCCCATT
369 CCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCGTA-AAAGTCTCCATT
* ** * * * * *
179383 CTTTTCAGGATAAGGCACCATAAACA-TTGTCTTCTCATAAGG
431 CTTTTCAAGATTGGGAACCAAAAACACAT-TCCT-TCATTAGG
* * * * * *
179425 ATGCATGATATTGATGCTTTGGATG-CGCAAGATACGC-TTTC-TTCCAACCAATT-T-GTGTAA
1 ATACATGACATTGATGCTTTGG-TGTCGCAAGAGAGGCTTTTCTTTCCAA-C-GTTATCG-ATAA
* * * ** * * * * ** *** * *
179485 AGT-ATGAGTTCAT-TGCTCAAATGAGACAAACTTGGATTCTTGTAGGGATCTTCATTCATTTCA
62 AATCA-AAATTTGTCT-CTTAAATAAGACAAACTTGAATACTCATACTAATC-CCATTCCTTTC-
** * * * * ** *
179548 T-GATTAGGCATTATAAACACA-TTCTCCTCATTA-GGATAAATGATATTGATGGTTTTCTTTTG
123 TGGATTAGGCACCATAAACATAGTTCT--T-A-TACGGATACAGGATATTGATGATTTGGTTTCG
** * * ** * * ** * * *
179610 CTTGGAAATC-TTTTCTTTGCC-TTATTTTCCT-TAAAATCAAAGTTTTTACTTTAAATGAGACA
184 C-AAGAAA-CGCTTT-TTTCCCACAATTTT--TGTAAATTCTAAGTTCGTGCCTCAAATGAGACA
** * * * ** * * * *
179672 TGCATTGATTCTCA-TAAA-AGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAATC-CCT
244 AACATGGATTCT-AGTAAAGA-TCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
** * * ** * * ** * *
179734 GCATTAGGATGCATGACATTGAT-GCTTTGGTGT-CGTAAAAGAGGCTTTTCTTT-CC-AACGTT
307 -CATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGGAA-A-TCTTTTCTTTGCCTTA--TT
* ** * * * * ** * * * * *
179795 ATCGATAAAATCAAAATTTAT-CTCTTAAATAAAACAAACTTTAATACTC--AAACTAATC-CCG
367 TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGTAAA--AGTCTCCA
* * * * * * *
179856 TTCTTTT-AGGATTAGGCACCATAAACAAAGT-CTTCTTTTACGG
429 TTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTC-ATTA-GG
* * * * * * * * * * * *
179899 ATGCAGGATATTGATGATTTGGTTTTGCAAGAAACG-TTTT-TTTCCCATA-ATTTTTG-TAAAT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTT-CCA-ACGTTATCGATAAAA
* * * * * * * * * *
179960 TCTAAGTTTGTAC-CTCAAATGAGACAAACATGGATTCT-AGTA-AAGATCTTCATTCATTT-TG
64 TCAAAATTTGT-CTCTTAAATAAGACAAACTTGAATACTCA-TACTA-ATC-CCATTCCTTTCTG
* * * * * ** *
180021 AGATTAGGCACTATAAACACATTCTCTTCATTA-GGATAAATGATATTGATTG-TTTTCTTTTGC
125 -GATTAGGCACCATAAACATAGT-TCTT-A-TACGGATACAGGATATTGA-TGATTTGGTTTCGC
** ** * ** * * * * * * **
180084 TCGAAAATCTTTTCTTTACC-TTATTTTCCT-TAAAATCTTAGTTTGTACTTTAAATGAGACATT
185 AAGAAACGC-TTT-TTTCCCACAATTTT--TGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAA
* * ** ** * * *
180147 CATTGATTTTAGTAAA-ACTCCCCATTC-TTTCCAAGATTAGG-ATCCAAAAACTCATT-TCCTT
246 CATGGATTCTAGTAAAGA-TCTTCATTCATTT-CGTGATTAGGCA-CTATAAACACATTCTCC-T
** * * * ** * ** ** * * *** ***
180208 CAAAAGGATACATGACATTGATGCTTTGGTGTCAC-AAGAGAAGCTTTT-TTTTCCACCGTTAAA
307 CATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGGA-AATCTTTTCTTTGCC-TTATTTTC
** * ** * ** * * *
180271 GATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGGATAATCATACTAA-TCCCCATTCT
370 CTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGTA-AAAGTCTCCATTCT
* * * ** * * * * *
180334 TTTTAGGATTAGCCACCATAAACATAGTCTTCTCATAAGG
433 TTTCAAGATTGGGAACCAAAAACACATTCCT-TCATTAGG
* * * * ** * * * * * *
180374 ATACATGATAGTGATGCTTTGGTTTCGCAAGAAACAC-TTTCTTCCCACCAATTTTTGA-AAATT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAAC-GTTATCGATAAAAT
* * * * * * * *** ** *
180437 CTAAATTCGTGC-CTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTAATTCATTTC-GTG
65 CAAAATTTGT-CTCTTAAATAAGACAAACTTGAATACTCA-TACTAATC-CCATTCCTTTCTG-G
* * * * * * * ** *
180499 ATTAGGCACTATAAACACATTCTACTCTTTA-GGATAAACGATATTGATGGTTTTCTTTCGCATG
126 ATTAGGCACCATAAACATAGT-T-CT-TATACGGATACAGGATATTGATGATTTGGTTTCGCAAG
** * ** ** * * * * * * ** *
180563 AAAATCTTTTCTTTGCCTTATATTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATT
188 AAACGC-TTT-TTTCCCACA-ATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATG
* * ** * * * *
180627 GATTCTCGTAAAAGTATC--CATTCTTTTCAAGATTGGGAACCAAAAACACATTC-CCTCCATTA
250 GATTCTAGT-AAAG-ATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-CATTA
* ** * ** * ** * **
180689 GGATACAAT-ATATTGATGCTTTGGTGTTGC--AAAAGAGGCTTTTCTTT--CAAACGTTATCGA
312 GGATA-AATGATATTGATGGTTTTCTTTTGCTTGGAA-A-TCTTTTCTTTGCCTTA--TTTTCCT
* ** * ** * *
180749 TAAAATCAAAATTTGT-CTCTTAAACAAGATAAAC-TTGAATACTCATAATAA-TC-CCATTCTT
372 TAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCGTAA-AAGTCTCCATTC-T
* * * ** * *
180810 TTTCAAGATTAGGCACC-ATAA-ATGTTGTCTTCCTATATGG
433 TTTCAAGATTGGGAACCAAAAACACATT-CCTTCAT-TA-GG
* * * * * * * * * * * * *
180850 ATACAGGATATTGATGATTTGGTTTCACGAGAAACGC-TTT-TTTCCCACAATTTTTG-TAAATT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAAC-GTTATCGATAAAAT
* * * * * * * * * * * *
180912 CTAAGTTTG-CGCCTCAAATAAGACAAGCATGGATTCT-AGTA-AAGATCTTCGTTCATTTC-GT
65 CAAAATTTGTC-TCTTAAATAAGACAAACTTGAATACTCA-TACTA-ATC-CCATTCCTTTCTG-
* ** * * * ** *
180973 GATTAGGCACTATAAACGCA-TTCTCCTAATTA-GGATAAATGATATTGATGGTTTTCTTTTGCT
125 GATTAGGCACCATAAACATAGTTCT--T-A-TACGGATACAGGATATTGATGATTTGGTTTCGC-
** * * ** * * * * * * * **
181036 TGGAAATC-TTTTCTTTGCC-TTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAAACATG
185 AAGAAA-CGCTTT-TTTCCCACAATTTT--TGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAA
* * * * ** * * * *
181098 CATTGATGCTCA-TAAA-AGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAATCT-CTAC
246 CATGGATTCT-AGTAAAGA-TCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-C
* * ** * * * * *
181160 ATTAGGATACATGACATTGAT-G-TTT-TGGTG-TCGGAAGAGAGGCTTTCCTTT-CC-AACGGT
308 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGG-A-A-A-TCTTTTCTTTGCCTTA--TT
* ** ** * ** * * * *
181219 ATCGGTAAAATCAAAAATTGT-CTCTTAAATAAGACAAAC-TTGAATACTCATACTAA-TCCCCA
367 TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCGTA-AAAGTCTCCA
* * * * ** * * *
181281 TTCTTTTCAGGATTAGGCACCATAAACGTAGTCATCTCATAAGG
429 TTCTTTTCAAGATTGGGAACCAAAAACACATTCCT-TCATTAGG
* * * * * * ** * * * * * *
181325 ATACAAGATAGTGATGCTTTGGTTTCACAAGAAACAC-TTTCTTCCCACCAATTTTTG-TAAATT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAAC-GTTATCGATAAAAT
* * * * * * *** * *
181388 CTAAGTTCCTG-C-CTCAAATGAGACAAACTTGGATTCT-AGTAAGGATCTCATTCATTTCAT-G
65 CAAAATT--TGTCTCTTAAATAAGACAAACTTGAATACTCA-TACTAATCCCATTCCTTTC-TGG
* * * * * * * * ** * *
181449 ATTAGGCACTATAAATACAATCTCCTCCT-TA-GGATAAATGATATTAATGGTTTTCTTTTGCAT
126 ATTAGGCACCATAAACATAGT-T-CT--TATACGGATACAGGATATTGATGATTTGGTTTCGCAA
** * * ** * * * * * * **
181512 GAAAATCTTTTCTTTGCCA-TATTTTCCCTAAAATC-AATGTTTGTACTTTAAATGAAACATGCA
187 GAAACGC-TTT-TTTCCCACAATTTT-TGTAAATTCTAA-GTTCGTGCCTCAAATGAGACAAACA
* * * * ** * * *
181575 TTGATTCTCGTAAA-AGTCTCCATTCTTTTCAAGATTGGGAACCATAAACACATTC-CCTCCATT
248 TGGATTCTAGTAAAGA-TCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-CATT
* * ** * * ** * * * *
181638 AGGATACAAT-ACATTGATGCTTTGGTGTCGC--AAAAGAGGCTTTTCTTT-CC-AACGTTATCG
311 AGGATA-AATGATATTGATGGTTTTCTTTTGCTTGGAA-A-TCTTTTCTTTGCCTTA--TTTTCC
* * * * ** * *
181698 ATAAAATCAAAATTTGT-CTCTTAAATAAGATAAAC-TTGAATACTCATAATAA-TC-CCATTCT
371 TTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCGTAA-AAGTCTCCATTC-
* * * * * * *
181759 TTTTCAGGATTAGGCACC-ATAA-ACGTTGTCTTCTTATATGG
432 TTTTCAAGATTGGGAACCAAAAACACATT-CCTTCAT-TA-GG
* * * * * * * * ** * * *
181800 ATACAGGATATTGATGATTTGGTTTCACGAGAAACGC-TTT-TTTCTCATAATTTTTTG-TAAAT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTC-CA-ACGTTATCGATAAAA
* * * * * * * * * * * *
181862 TCTAAGTTTG-CGCCTCAAATAAGACAAGCATGGATTCT-AGTA-AAGATCTTCGTTCATTTC-G
64 TCAAAATTTGTC-TCTTAAATAAGACAAACTTGAATACTCA-TACTA-ATC-CCATTCCTTTCTG
** * ** * * * * ** * *
181923 TGATTAGGTTCTATAAACGCATTCTCCTTATTA-GGATAAATGATATTGATGGTTTTCTTTTGCT
125 -GATTAGGCACCATAAA--CATAGTTCTTA-TACGGATACAGGATATTGATGATTTGGTTTCGCA
* ** * ** * * * * * * ***
181987 TGAAAATCTTTTCTTTGCC-TTATTTTCCT-TAAAATCAAAGATT-GTACTTTAAATGAAACTTG
186 AGAAACGC-TTT-TTTCCCACAATTTT--TGTAAATTCTAAG-TTCGTGCCTCAAATGAGACAAA
* * * ** * * * * *
182049 CATTGATTCTCA-TAAA-AGTCTCCATTCTTTTCAAGAGTAGGAACCAAAAACACAATC-CCTAC
246 CATGGATTCT-AGTAAAGA-TCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-C
* ** ** * * * * *
182111 ATTAGGATACATGGCATTGAT-G-TTT-TGGTG-TCGGAAGAGAGGCTTTCCTTT-CC-AACGAT
308 ATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGG-A-A-A-TCTTTTCTTTGCCTTA--TT
* ** * ** * * *
182170 ATCGC-TAAAATCAAAAATTGT-CTCTTAAAT-AG-GATAAACTTGAATACTCATACTAA-TC-C
367 TTC-CTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCA-TTG-ATTCTCGTA-AAAGTCTC
* * * * * * * *
182229 TCATTCTTTTCATGATTAGGCACCATAAACATAGTCATCTCATAAGG
427 -CATTCTTTTCAAGATTGGGAACCAAAAACACATTCCT-TCATTAGG
* * * * * ** * * * *
182276 ATACAAGATAGTGATGCTTTGGTTTCGCAAGAAACAC-TTTC-TTCCAACCAATTTTTG-TAAAT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAA-C-GTTATCGATAAAA
* * * * * * * *** * *
182338 TCTAAGTTCCTG-C-CTCAAGTGAGACAAACTTGGATTCT-AGTAAGGATCTTCATTCATTTC-G
64 TCAAAATT--TGTCTCTTAAATAAGACAAACTTGAATACTCA-TACTAATC-CCATTCCTTTCTG
* * * * * * * ** *
182399 TGATTAGGCACTATAAACACA-TTCTCCTCCTTA-GGATAAATGATATTCATGGTTTTCTTTTGC
125 -GATTAGGCACCATAAACATAGTTCT--T--ATACGGATACAGGATATTGATGATTTGGTTTCGC
* ** * ** * * *
182462 ATGAAAATCTTTTCTTTGCC-TTATTTTCCT-TAAAATCAAAGTT--TGCACTTTAAATGAGACA
185 AAGAAACGC-TTT-TTTCCCACAATTTT--TGTAAATTCTAAGTTCGTGC-C-TCAAATGAGACA
** * * * * * ** * ** *
182523 TGCATTGATTCTCGTAAA-AGTCTCCTTTCTTTTCAAGATTGGGAACCAAAAAAAACACATTCTC
244 AACATGGATTCTAGTAAAGA-TCTTCATTCATTTCGTGATTAGG---CACTATAAACACATTCTC
* * ** ** * **** * ** * *
182587 TTCGTTAGGATGCATGACGTTGATGCTTTGGAGTCGCAAGAGAAGA--TGTTCTTTCCACCATTA
305 CTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTG-GAA-ATCTTTTCTTT--GCC-TTA
* * * * * ** ** * *
182650 -TTT--ATAGAATCAAAGGTTGT-CTCTTAAATAAAACAAAC-TTGAATAGTCATATTAA-TC-C
365 TTTTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCGTA-AAAGTCTC
* * * * * * * *
182708 ACATTCTTTTCTAGATTAGGCACCAGAAACATAGTCTTATCATAAGG
427 -CATTCTTTTCAAGATTGGGAACCAAAAACACATTCCT-TCATTAGG
* * * * * *** * * * * * * * *
182755 ATGCAGGATATTGATTCTTTGGTTTCGTGGGAAACGC-TCTC-TTCCCACTAATTTTTG-TAAAG
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAAC--GTTATCGATAAAA
* * * * * * * *** ** *
182817 T-ATAAGTTCTTTC-CTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTTATTCATTTC-G
64 TCA-AAATT-TGTCTCTTAAATAAGACAAACTTGAATACTCA-TACTAATC-CCATTCCTTTCTG
* * ** * * * ** **
182878 TGATTAGGCACC-TAAACACA-TTCTCCCCATTGGGATAAATGATATTGATGGTTTTCTTTTACT
125 -GATTAGGCACCATAAACATAGTTCT---TATACGGATACAGGATATTGATGATTTGGTTTCGC-
** * * * * * * * * * * * *
182941 TGGAAATC-TTTTATTTGCCTCACTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACAAGC
185 AAGAAA-CGCTTT-TTTCCCACAATTT-TTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAAC
* * * * * ** * * * * * *
183004 ATTGATTCTCGTAAA-AGTCTCCCTT-TTTTCCAAGATTGGGAACCAAAAACACTTTCTCTTCAT
247 ATGGATTCTAGTAAAGA-TCTTCATTCATTT-CGTGATTAGGCACTATAAACACATTCTCCTCAT
* * * ** * * ** * * * *
183067 TAGGATATATGACATTGATGCTTTGGTGTCGC-AAGAGAAGCTTTTCTTTCCACCGTTA--AT-G
310 TAGGATAAATGATATTGATGGTTTTCTTTTGCTTGGA-AATCTTTTCTTT--GCC-TTATTTTCC
* * * * * ** * ** *
183128 ATAAAATCAAAGTCTAT-CTCTTAAATAAGATAAACA-TGAATACTCACACTAA-TAC-CCATTC
371 TTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTCGTA-AAAGT-CTCCATTC
* * * * * * * * *
183189 TTTTCAGGATTAGGCACTATAAACATAGTCTTCTCATAAGG
432 TTTTCAAGATTGGGAACCAAAAACACATTCCT-TCATTAGG
** * * * * *
183230 ATACGGGATATTGATGATTTGGTCTAGCAAGAAATGG--TTT-TTTCC--C---A-C--------
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGA-GGCTTTTCTTTCCAACGTTATCGATAAAAT
* * * * * * * **
183278 C--AATTT-T-T-GTAAAT---TCAAAGTT-CATGCT--TA-AAAGTCTCCATTCTTTTCAAGAT
65 CAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAA-TC-CCATTCCTTTCTGGAT
* * * * ** * *
183331 TGGGAACCAAAAACACA-TTCCCTTCATTA-GGATACTTGACATTGATGCTTTGGTGTT-GCAAG
128 TAGGCACCATAAACATAGTT--CTT-A-TACGGATACAGGATATTGATGATTTGGT-TTCGCAAG
* * * * * * ** * * * *
183393 AGAGGCTTTTCTT-CC-CAATGTTATCAGTAAAATCAAAATTTAT-CTCTAAAATAATACAAACT
188 AAACGCTTTT-TTCCCACAAT-TT-T-TGTAAATTCTAAGTTCGTGC-CTCAAATGAGACAAACA
* * * * * * * ** ** *
183455 TGAATACTCA-TACTA-ATC-CCGTTCTTTTCAG-GATTAGGCACCATAAACACGGTCTTTTTA-
248 TGGATTCT-AGTA-AAGATCTTCATTCATTTC-GTGATTAGGCACTATAAACACATTCTCCTCAT
* * * ** ** *** * * * *
183515 TACGGATACAGGATATTGATGATTTGGTTTCAC-AACAAACGCTTTT-TTTCCCATAATTT-CTG
310 TA-GGATAAATGATATTGATGGTTTTCTTTTGCTTGGAAA-TCTTTTCTTTGCCTTATTTTCCT-
* * * * * * ** * * * * * *
183577 TAAATTCTAAGTTCGTCCCTCAAATGAGACAAACATGGTTTCTAGT-AAGGATCTTCATTCATTT
372 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG-TCTCCATTCTTTT
** * * * * * * **
183641 CGCGATTAGGCACTATAAACATATTCTCCTCGCTAGG
436 CAAGATTGGGAACCAAAAACACATTC-CTTCATTAGG
* * * * ** * * ** * * **
183678 ATAAATGATATTGACGGTTTTCTTTTGCATAGA-AATCTTTTCTTTGCCTTA--TTTTCCTTAAA
1 ATACATGACATTGATGCTTTGGTGTCGCA-AGAGAGGCTTTTCTTT-CC-AACGTTATCGATAAA
* * * * ** * * *
183740 ACCAAAGTTTATACT-TTAAATGAGACATGCATTG-ATTCTCATA-AAAGTCTCCATT-TTTTCC
63 ATCAAAATTTGT-CTCTTAAATAAGACAAAC-TTGAATACTCATACTAA-TC-CCATTCCTTT-C
** * * * * * * * *
183801 AAGATTGGGAACCAAAAACACT-TTCTCTTCATTAC-GATACATGACATTGATGCTTTGGTGTCG
123 TGGATTAGGCACCATAAACA-TAGT-TCTT-A-TACGGATACAGGATATTGATGATTTGGTTTCG
* * ** * * * * *
183864 CAAGAGAA-GCTTTTCTTTCCACCATTAATGATAAA-TCAAAG-TC-TATCTCTTAAATAAGATA
184 CAAGA-AACGCTTTT-TTCCCACAATTTTTG-TAAATTCTAAGTTCGT-GC-CTCAAATGAGACA
* * * * * * * * * *
183925 AACATGAATACTCA-TACTA-ATAC-CCATTCTTTTCAG-GATTAGGC-CCAAAAACATAGTCTT
244 AACATGGATTCT-AGTA-AAGAT-CTTCATTCATTTC-GTGATTAGGCACTATAAACACATTCTC
* * * * ** * * ** * *
183985 CTTATAAGGATACGA-GATATTGATGATTTGGTCTAGC-AAGAAA------C---G-GTT-TGTT
305 CTCATTAGGATA-AATGATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTT
* * * *** * * *
184037 CC----CA-CCAA-TTT-T--TGTAAATTCTA-A-G--TTCA-T-GCGTAAAAGTCTCCATTCAT
369 CCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTT
184087 TTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGG
434 TTCAAGATTGGGAACCAAAAACACATTCC-TTCATTAGG
* * *
184126 ATACTTGACATTGATGCTTTGTTGTCGCAAGAGAGGGCTTTTCTTTCCAACGTTATCGGTAAAAT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGA-GGCTTTTCTTTCCAACGTTATCGATAAAAT
* * *
184191 CAAAATTTGTCTCTTAAATAATACAAACTTGAATACTCATACTAATCCCATTCTTTTCGGGATTA
65 CAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATTCCTTTCTGGATTA
* * * *
184256 GGCACCATAAACATAGTCTTCTTATACGGATATAGGATATTGATGATTTAGTTTCTCAGGAAACG
130 GGCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACG
** * *
184321 CTTTTTTCCCTTAATTTTTGTAAATTCTAAGTCCGTGCCTCAAATGAGACAAACATGGATCCTAG
193 CTTTTTTCCCACAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAG
* * *
184386 TAAGGATCTTCATTCATTTCGTGATTAGACACTATAAACATATTCTCCTCATTAGGATAAATGAT
258 TAAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGAT
* * * * *
184451 ATTGATAGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCATTAAAACCAAAGTTTGT
323 ATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
**
184516 ACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCTTTTCTTTTCAAGATTGGGAACCAAA
388 ACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACC--A
184581 AAAACACATTCTCTTCATTAGG
451 AAAACACATTC-CTTCATTAGG
* * * * * * * ** * *
184603 ATGCATGACGTTGATGCTTTGGTGTCCCAAGAGAAGCTGTTCTTTCTACCGTTATTTATAGAATT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
* * * * * * *
184668 AAAGTTTGTCTCTTAAATAAAACAAACTTGAATAGTCATATTAATCTACATTCTTTTCTAGATTA
66 AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATC-CCATTCCTTTCTGGATTA
* * * * * * ** ***
184733 GGCACTAGAAACATAGTCTTCTAATAAGGATAAATGATATTGATTCTTTGGTTTCGTGGGAAACG
130 GGCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACG
* * * * * * *
184798 CTCTCTTCCCAGCAATTTTTGTAAAGTATAAGTTCATTCCTTAAATGAGACAAACATGGATTCTA
193 CTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
* * * *
184863 GTAAGGATCTTTTATTCATTTCGTGATTAGGCACCATAAACACATTCTCCACATTAGGATAAATG
257 GTAAAGATC-TTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* *
184928 ATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTTCTTAAAATCAAAGTTT
321 ATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
* * * *
184993 GTACTTTAAATAAGACATGCATTGATTCTCATAAAAGTCTCCGTTCTTTTCAAGATTAGGAACCA
386 GTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCA
185058 AAAACACATTTCCTTCATTAGG
451 AAAACACA-TTCCTTCATTAGG
* ** *
185080 ATACATGAAATTGATGCTTTGGTGTCATAGGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
* * * * * *
185145 AAAGTTTGTCTCTTAAATAAGACAAGCATGAATACTTATACTAATCCCCATTCTTTTCAGGATTA
66 AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAAT-CCCATTCCTTTCTGGATTA
* * * * * * * *
185210 GGCGCCATAAACATAATCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCACAAGATACG
130 GGCACCATAAACAT-A-GTTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACG
* ** * * * *
185275 CTTTCTTCCCACCAATTTGGGTAAATTATGAGTTCATTG-CTCAATTGAGACAAACATGGATTCT
193 CTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTC-GTGCCTCAAATGAGACAAACATGGATTCT
* ** *
185339 TGTAGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATG
256 AGTAAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* *
185404 ATATTGATGGTTTTCTTTTGCATGGAAATGTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
321 ATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
* * *
185469 GTACTTTAAATGAGACATGCATTGATTCTCGTAAACGTCTTCATTCCTTTCAAGATTGGGAACCA
386 GTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCA
*
185534 AAAACACATTCCCTTTATTAGG
451 AAAACACATT-CCTTCATTAGG
* * *
185556 ATACATGACTTTGATACTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
* * * ***
185621 AAAATTTGTCTCTTAAATAAGATAAACTTGAATACTCGTACTAATCCCATTCTTTTAAAGATTAG
66 AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATTCCTTTCTGGATTAG
* * * *
185686 GCACCCTAAACATAGTCTTCTTATATGGATACAGGATATTGATGATTTGGTTTCGCGAGGAACGC
131 GCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGC
* *
185751 TTTTTTCCCACAATTTTTGTAAATTCTAAATTTGTGCCTCAAATGAGACAAACATGGATTCTAGT
194 TTTTTTCCCACAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* * *
185816 AAAGACCTTCGTTCATTTCATGATTAGGCACTATAAACACATTCTCGC-CATTAGGATAAATGAT
259 AAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTC-CTCATTAGGATAAATGAT
*
185880 ATTGATGGTTTTCTTTTTC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
323 ATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * *
185944 ACTTTATATGAGATATGCATTGATTCTCGTAAAAGTCTCCATTCCTTTCAAGAATGGGAACCAAA
388 ACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA
* *
186009 AACACATTCCCTTTATTGGG
453 AACACATT-CCTTCATTAGG
186029 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCC-A----A-CG-TAAAATC
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
* * * ** *
186087 AAAATTTATCTCTTAAATAAGATAAACTTGAATACTCATACTAATCCCTTTTTTTTCAGGATTAG
66 AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATTCCTTTCTGGATTAG
* *
186152 GCACCATAAACATAGTCTTCTTATACGGATACAAGATATTGATGATTTGGTTTCGCAAGAAACTC
131 GCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGC
* *
186217 TTTTTTCCCACAAGTTTTGTAAATTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGT
194 TTTTTTCCCACAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* * *
186282 AAAGATCTTCGTTCATTTCATGATTAGGCACTATAATCACATTCTCCTCATTAGGATAAATGATA
259 AAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
* * * *
186347 ATGATGGTTTTCTTTTACTTGAAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTA
324 TTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * *
186412 CTTTAAATGAAACATGCTTTGATTGTCGTAAAAGTCTTCATTCTTTTCAAGATTCGGAACCAAAA
389 CTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
* *
186477 ACACAATCCCTGCATTAGG
454 ACAC-ATTCCTTCATTAGG
* * * * *
186496 ATACATGACATTCATGCTTTGGTGTGGCAAGAAAGGTTTTTCTTTCCAACGTTATCGGTAAAATC
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
* * * **
186561 AAAATTTATCTCTTAAATAAAACAAACTTCAATACTCATACTAATCCTGTT-CTTT-TAGGATTA
66 AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATTCCTTTCT-GGATTA
* * ** * *
186624 GGCACCATAAACAAAGTCTTCTTTTACGGATGTAGGATATTGATGATTTGGTTTCACAAGAAATG
130 GGCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACG
* *
186689 CTTTTTTCCCACAATTTTTGTAAATTCTAAGTTCGTACCTCAAATTAGACAAACATGGATTCTAG
193 CTTTTTTCCCACAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAG
* *
186754 TAAAGATCTTCATTCATTTTGAGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGAT
258 TAAAGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGAT
* * * *
186819 -TATGATGGTTTTCTTTTACTTGAAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTGTG
323 AT-TGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTG
* * *
186883 CACTTTAAATGAGATATGCATTGATTCTCGTAAAAGTCTCCTTTCTTTTCAAGATTGGGAACCAA
387 TACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-A
186948 CAAAACACATTCTCTTCATTAGG
451 -AAAACACATTC-CTTCATTAGG
* ** * * * ** *
186971 ATGCATGAGGTTGATGCTTTGGTGTCGCAAGAGAAGCTATTT-TTTCCACCATTATTTATAGAAT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCT-TTTCTTTCCAACGTTATCGATAAAAT
* * * * * * *
187035 CAAAGTTTGTCTCTTAAATAAAACAAACCTGAATAGTCATATTAATCCACATTCTTTTCTAGATT
65 CAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCC-CATTCCTTTCTGGATT
* * * * ** ***
187100 AGGCACCAGAAACATAGTCTTCTCATAAGGATACATGATATTGATTCTTTGGTTTCGTGGGAAAC
129 AGGCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAAC
* * * * * *
187165 GCTCTCTTCCCACCAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGATTCT
192 GCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* * * * * *
187230 AGTAAGGATATTTTATTCATTTCATGATTAGGCACCATAAACACATTCTCCTCGTTAGGATAAAT
256 AGTAAAGAT-CTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAAT
* * *
187295 GATATTGATAGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
320 GATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
* * * * *
187360 TGCACTTTAAATGAGATATGCATTGATTCTCGTATAAGTCTCCTTTCTTTTCAAGATTGGGAGCC
385 TGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACC
187425 AAAAAAACACATTCTCTTCATTAGG
450 --AAAAACACATTC-CTTCATTAGG
* * * * * * * * ** *
187450 ATGCATCACGTTGATGTTTTGGTGTTGCAAGAGAAG-TTGTTCTTTCCACCATTATTTATAGAAT
1 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTT-TTCTTTCCAACGTTATCGATAAAAT
* * * * * * *
187514 CGAAGTTTGTCTCTTAAATAAAACAAACTTGAATAGTCATATTAATCCACATTCTTTTCTAGATT
65 CAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCC-CATTCCTTTCTGGATT
* * * * * * ** *** *
187579 TGGCACCACAAACATAGTCTTCTCATAAGGATACATGACATTGATTCTTTGGTTTCGTGGGAAAT
129 AGGCACCATAAACATAG--TTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAAC
* * * * * * *
187644 GCTCTCTTCCCACCAATTTTTGTAAAGTATATGTTCATTCCTCAAATGAGACAAACATGGATTCT
192 GCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* * * * *
187709 AGTAAGGATCTTTTATTCATTTCATGATTAGGCACCATAAACACATTCTCCTTATTAGGATAAAT
256 AGTAAAGATC-TTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAAT
* * *
187774 GATATTGATAGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
320 GATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
* * * * *
187839 TGCACTTTAAATGAGATATGTATTGATTCTCGTAAAAGTCTCCTTTCTTTTCAAGATTGGGAGCC
385 TGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACC
187904 AAA
450 AAA
187907 GAAAACACAT
Statistics
Matches: 11049, Mismatches: 1627, Indels: 1095
0.80 0.12 0.08
Matches are distributed among these distances:
445 2 0.00
446 10 0.00
447 71 0.01
448 258 0.02
449 162 0.01
450 75 0.01
451 11 0.00
452 7 0.00
453 1 0.00
454 5 0.00
455 5 0.00
456 3 0.00
457 3 0.00
458 7 0.00
459 2 0.00
460 4 0.00
463 2 0.00
464 4 0.00
465 4 0.00
466 271 0.02
467 165 0.01
468 8 0.00
469 55 0.00
470 311 0.03
471 772 0.07
472 527 0.05
473 1428 0.13
474 926 0.08
475 1837 0.17
476 1831 0.17
477 556 0.05
478 272 0.02
479 1031 0.09
480 8 0.00
481 8 0.00
482 9 0.00
483 2 0.00
484 2 0.00
485 13 0.00
486 275 0.02
487 104 0.01
488 1 0.00
489 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (471 bp):
ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATC
AAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCATTCCTTTCTGGATTAG
GCACCATAAACATAGTTCTTATACGGATACAGGATATTGATGATTTGGTTTCGCAAGAAACGCTT
TTTTCCCACAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAA
AGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATT
GATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
TTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
ACATTCCTTCATTAGG
Found at i:178464 original size:159 final size:160
Alignment explanation
Indices: 174207--183263 Score: 2952
Period size: 159 Copynumber: 57.2 Consensus size: 160
174197 TCGTATGAGT
* * * ** * **
174207 ATACATGACATTGATGCTTTGGTGTCACAAGAGTAGCTTTTTTTTCCACCGTTA-AAGATAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* ** * * * *
174271 CAAAGTTTGTCTCTTAAATAAGACAAACATGGATAATCA-TACTAATCCCCATTCTTTTTAGGAT
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCATGAT
* * * *
174335 TAGCCACCATAAACATAGTCTTCTCATAAGG
130 TAGGCACCATAAACACATTCTTCTCATTAGG
* * * *
174366 ATACATGATAGTGATGCTTTGGTTTCGCAAGAAACA-C-TTTCTTCCCACCAATT-TTTGA-AAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAA-AGCTTTTCTTTCCACC-GTTATTCGATAAA
* * * * * * ** * * *
174427 TTCTAAA-TTCGTGC-CTCAAATGAGACAAACATGGATTCT-TGTAGGGATCTTCATTCATTTCG
64 ATC-AAAGTTTGT-CTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCA
* * *
174489 TGATTAGGCACTATAAACACATTCTGCTCTTTAGG
126 TGATTAGGCACCATAAACACATTCTTCTCATTAGG
* * * * * * * **
174524 ATAAATGATATTGATGGCTTT-CTTTTGCATGGAAATCTTTTCATT--ACC-TTATTTTCCTTAA
1 ATACATGATATTGAT-GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATAA
* ** * *
174585 AATCAAAGTTCGTACT-TTAAATAAGACATGCATTG-ATTCTC-GTAAAAGCCTCCATTTTTTTC
63 AATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTC
* * * * *
174647 AAGATTGGGAACCAAAAACACATT-TCCTTCATTAGG
125 ATGATTAGGCACCATAAACACATTCTTC-TCATTAGG
** * * ** * * * * *
174683 ATACATGGCATTCAAGCTTTGGCGTCGCAAGAGAGGCGTTTCTTTTCAACGTTATT-GATAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * * * * *
174747 CAAAATTTGTCTCCTAAATAAGATAAACTTGAATACTCA-TACTAA--TCCATTCTTTTCAGGAT
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCATGAT
* * * *
174809 CAGGCACCAT-AA-ACATTGTTTTCTTATACGG
130 TAGGCACCATAAACACATTCTTCTCAT-TA-GG
* * * * * * * *** * *
174840 ATATAGGATATTGATGATTTGGTTTGGCGAGAAATGCTTTT-TTCCCAAAATTTTTC--TAAATT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * * * * * *
174902 CTAAGTTCGTGC-CTCAAATGAGATAAACATGGATTCT-AGTAAAGATCTTCATT-TATTTCGTG
66 CAAAGTTTGT-CTCTTAAATAAGACAAACATGAATTCTCAGTAAA-ATCTCCATTCT-TTTCATG
** *
174964 ATTAGGCACTTTAAACACATTCTCCTCATTAGG
128 ATTAGGCACCATAAACACATTCTTCTCATTAGG
* * ** * ** * * * * ** * **
174997 ATAAATGATATTGATGGTTTTATTTTGCTTGGAAATCTATTCTTTGC-CTTTTTTTCCTTAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* ** *
175061 CAAAGTTTGTACT-TCAAATAAGACATGCATTG-ATTCTC-GTAAAAGTCTCCATTCTTTTCAAG
66 CAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTCATG
* *
175123 A-TAGGAACCA-AAACACATTC-CCTTCATTAGG
128 ATTAGGCACCATAAACACATTCTTC-TCATTAGG
* * * *
175154 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCACCGTTA-TCGATAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * * *
175218 CAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCA-TACTAATC-CCATTCTTTTCAGGAT
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCATGAT
* * * *
175281 TAGGCTCCATAAACAAAGTCTTCTTA-TACGG
130 TAGGCACCATAAACACATTCTTCTCATTA-GG
* * * * ** ** * *
175312 ATGCAGGATATTGATGATTTGGTTTCGCAAGAAGCA-CTTTT-TCCCCACAATT-TTTG-TAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAA-AAGCTTTTCTTTCCACCGTTATTCGATAAAA
* * * ** * * *
175373 TCTAAGTTTGTGC-CTCAAAT--GACAAACATGGATTCT-AGTAAAGATCTTAATTCATTTCGTT
65 TCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATTCTCAGTAAA-ATCTCCATTCTTTTCATG
* * * * *
175434 ATTAGGCACTATAAACACATTCTCCCCACTACG
128 ATTAGGCACCATAAACACATTCTTCTCATTAGG
* * * * ** **
175467 ATACATGATATTGATGGCTTT-CTCTT-GCATGGAAATCTTTTCTTT--GTC-TTATTTTCCTTA
1 ATACATGATATTGAT-GCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATA
* ** *
175527 AAATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTATC-GTAAAAGTCTCCATTCTTTT
62 AAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTT
* * * * * * *
175589 CAAGATTCGGAACCAAAAACACAATC-CCTGTATTAGG
124 CATGATTAGGCACCATAAACACATTCTTCT-CATTAGG
* * * * * *
175626 ATACATGACATTCATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTA-TC-AGTAAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGA-TAAAA
* * * * * ** * * *
175689 TCAAAATTTATCTCTTAAATAAAACAAACTTCAACACTCA-TACTAATC-CCGTTCTTTT-AGGA
65 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCATGA
* * *
175751 TTAGGCACCATAAACAAAGTCTTCT-TTTACGG
129 TTAGGCACCATAAACACATTCTTCTCATTA-GG
* * ** * * ** * *
175783 ATGCAGGATATTGATAATTTGGTTTCACAAGAAATGCTTTT-TTTCCACAATT-TTTG-TAAATT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * * * * *
175845 CTAAGTTCGTAC-CTCAAATGAGACAAACATGGATTCT-AGTAAAGATCTTCATTCATTTTGA-G
66 CAAAGTTTGT-CTCTTAAATAAGACAAACATGAATTCTCAGTAAA-ATCTCCATTC-TTTTCATG
* *
175907 ATTAGGCACTATAAACACATTCTCCTCATTAGG
128 ATTAGGCACCATAAACACATTCTTCTCATTAGG
* * * * * ** ** * * *
175940 TTAAATGGTATTAATTGTTTTCCTTT-GCTCGAAAATCTTTTCTTT--GCC-TTATTTTCAATAA
1 ATACATGATATTGA-TGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATAA
** * *
176001 AATCAAAGTTTGT-TCTTTAAATAAGACATGCAATG-ATTCTC-TTAAAAGTCCCCATTC-TTTC
63 AATCAAAGTTTGTCTC-TTAAATAAGACAAAC-ATGAATTCTCAGTAAAA-TCTCCATTCTTTTC
* * * * * *
176062 CTAAATTAGG-ATCCAAAAACTCATT-TCCTTCAATAGG
125 AT-GATTAGGCA-CCATAAACACATTCTTC-TCATTAGG
* * ** * ** *
176099 ATACATGACATTGATTCTTTGGTGCCGCAAGAGAAGCTTTT-TTTCCACCGTTA-AGGATAAAAC
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * * * *
176162 CAAAGTTTGTCTATTAAATAAGACAAACATGAATACTCA-TACTAATCCCCATTCTTTTTAGGAT
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCATGAT
* * * *
176226 TAGGCACCATAAACATAGTCTTCTCATAAAG
130 TAGGCACCATAAACACATTCTTCTCATTAGG
* * * *
176257 ATACATGATAATGATGCTTTGGTTTCGCAAGAAACA-C-TTTCTTCCCACCAATT-TTTG-TAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAA-AGCTTTTCTTTCCACC-GTTATTCGATAAA
* * * * * * * * * *
176318 TTCTAAA-TTCGTGC-CTCAAATGAGACAAACATGGATTC-AAGTAAGGATCTTCATTCATTTCG
64 ATC-AAAGTTTGT-CTCTTAAATAAGACAAACATGAATTCTCAGTAA-AATCTCCATTCTTTTCA
* * * *
176380 TGATTAGGCACTATAAACGCATTCTGCTCTTTAGG
126 TGATTAGGCACCATAAACACATTCTTCTCATTAGG
* * ** * * * * **
176415 ATAAACGATATTGATTG-TTTTCTTTTGCATGAAAATCTTTTCTTT--GCC-TTATTTTCCTTAA
1 ATACATGATATTGA-TGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATAA
* * *
176476 AATCAAAGTTTGTACT-TTAAATGAGACAAGCATTG-ATTCTCA-TAAAAGTCCCCATTCTTTTC
63 AATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTC
* * * * * *
176538 AAGATTGGGAACCAAAAAAACATTC-ACTGCATTAGG
125 ATGATTAGGCACCATAAACACATTCTTCT-CATTAGG
* * * * * **
176574 ATACATGACATTGATGCTTTAGTGTCGCAAGAGAGGCTTTTCTTTCCAATGTTA-TCGATAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * * * * *
176638 CAAAATTTGTCTCTAAAATAAGACAAACTTGAATACTCA-TACTAATC-CCATTCCTTTC-TGGT
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCAT-GA
* * *
176700 TTAGGTACCATAAACAAAGTC-T-T-A-TACGG
129 TTAGGCACCATAAACACATTCTTCTCATTA-GG
* * * * * ** * *
176729 ATGCAAGATATTGATGATTTGGTTTCGCAAGAAACGCTTTT-TTCCCACAATT-TTTG-TAAATT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * *
176791 CTAAGTTTGTGC-CTCAAATGAA-ACAAACATGGATTCT-AGTAAAGATCTTCATT-TATTTCAT
66 CAAAGTTTGT-CTCTTAAAT-AAGACAAACATGAATTCTCAGTAAA-ATCTCCATTCT-TTTCAT
* * * * *
176852 GATTTGGCACTATAAACACATTCTCCTCAATAAG
127 GATTAGGCACCATAAACACATTCTTCTCATTAGG
* * * ** * ** * * * **
176886 ATAAATGATATTGACGGTTTTCTTTTGCTTGGAAATCTTTTCTTT--GCC-TTATTTTCCTTAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATAAA
* ** *
176948 ATCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTC-GTAAAAGTCTCCATTATTTTCA
64 ATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTCA
* * * * *
177010 AGATTGGGAATCGA-AAACACATT-TCCTTCATTAGG
126 TGATTAGGCA-CCATAAACACATTCTTC-TCATTAGG
* * * * **
177045 ATACATGACATTCATGCTTTGGTGTT-GCAAGAGAGGCTTTTCTTTCCAATGTTATT-GATAAAA
1 ATACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAA
* * * * * * *
177108 TCAAAATTTGTCTCTTAAATAAGATAAACTTTAATACTCA-TACTAATC-CCATTCTTTTCAGGA
65 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCATGA
* * *
177171 TTAGGCACCAT-AA-ACATTGTTTTCTTATACGG
129 TTAGGCACCATAAACACATTCTTCTCAT-TA-GG
* * * * * * *** * *
177203 ATATAGGATATTGATGATTTGGTTTTGCGAGAAATG-TTTT-TTTCCCAAAATTTTTC--TAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCGTTATTCGATAAAA
** * * * * * * *
177264 TTTAAGTTCGTGC-CTCAAATGAGACAAACATGGATTCT-AGTAAAGATCTTCATTCATTTCGTG
65 TCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATTCTCAGTAAA-ATCTCCATTCTTTTCATG
** *
177327 ATTAGGCACTTTAAACACATTCTCCTCATTAGG
128 ATTAGGCACCATAAACACATTCTTCTCATTAGG
* * ** * ** * ** * * *
177360 ATAAATGATATTGATGGTTTTCTTTTGCTTGGAAATATATTCTTT--GCC-TTATTTTC-TTCAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGAT-AA
* * **
177421 AATCAAAGTTTGTACT-TCAAATGAGACATGCATTG-ATTCTC-GTAAAAGTCTCCATTCTTTTC
63 AATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTC
* * * ** *
177483 AAGATTGGGAACCA-AATACACATTCCCCGCATTAGG
125 ATGATTAGGCACCATAA-ACACATTCTTCTCATTAGG
* * * ** *** * *
177519 ATACATGACATTGATGCTTTGGTGTT-GCATG--CA-CTTTT-TCCCCATAATT-TTTG-TAAAT
1 ATACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAA
* * * * * * * * * *
177577 TCTAAGTTAGTGC-CTCAAATGAGACAAACATGGATTC-AAGTAATGATCTTCATTCATTTCGTG
65 TCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATTCTCAGTAA-AATCTCCATTCTTTTCATG
* * * *
177640 ATTAGGCACTATAAACACATTCTCCTCACTAAG
128 ATTAGGCACCATAAACACATTCTTCTCATTAGG
* * * ** ** * *
177673 ATACATGATATTGATGGCTTT--TTCTTGCATGGAATTCTTTTCTTT--GTC-TTATTTTC-CTT
1 ATACATGATATTGAT-GCTTTGGTT-TCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATA
* *
177732 AAATCAAAGTTTGTACT-TTAAATGAGACAAGCATTG-ATTCTC-GTAAAAGTCTCCATTCTTTT
62 AAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTT
* * * * * * *
177794 CAAGATTGGGAACCAAAAAAACATTC-ACTACATTACG
124 CATGATTAGGCACCATAAACACATTCTTCT-CATTAGG
* * * * **
177831 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAATGTTA-TCGATAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * * * * *
177895 CAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCA-TACTAATC-CCATTCCTTTCAGGTT
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCATGAT
* * * *
177958 TAGGTACCATAAACAAAGTCTTCTTA-TACGG
130 TAGGCACCATAAACACATTCTTCTCATTA-GG
* * * * * ** * *
177989 ATGCAGGATATTGATGATTTGGTTTAC-CAAGAAACG-TTTT-TTCCCACAATT-TT-TATAAAT
1 ATACATGATATTGATGCTTTGGTTT-CGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAA
* * * * *
178049 TCTAAA-TTCGTGC-CTTAAATGAGACAAACATTG-ATTCT-AGTAAAGATCTTCATTCATTTCG
65 TC-AAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAA-ATCTCCATTCTTTTCA
* * *
178110 TAATTAGGCACTATAAACACATTCTCCTCATTAGG
126 TGATTAGGCACCATAAACACATTCTTCTCATTAGG
* * * * * * **
178145 ATACATGATATTGATGGCTTT--CTCCTGCATGGAAATCTTTTCTTT--GCC-TTATTTTCCTTA
1 ATACATGATATTGAT-GCTTTGGTTTC-GCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATA
* * * ** *
178205 AAATGAAAGTTTGTAC-ATTAAATGAGACATGCATTG-ATTCT-TGTAAAAGTCTCCATTCTTTT
62 AAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTT
* * *
178267 AATGATTGGGAACCA-AAAGCACATTTCCTT-T-ATTAGG
124 CATGATTAGGCACCATAAA-CACA-TT-CTTCTCATTAGG
* * * * *
178304 ATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTGTTTCCACCGTTAAT-GATAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * *
178368 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAG-ACTAATCCCCATTCTTTTCATGAT
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCATGAT
* * *
178432 TAGGCACCATAAACATAGTCTTCTCATAAGG
130 TAGGCACCATAAACACATTCTTCTCATTAGG
* * * * * * * * *
178463 ATAAAGGATATTGATGATTTGGTTTTGCAAGAAAGGCTTTT-TTCCCACTAGTTTTTC--TAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCAC-CGTTATTCGATAAAA
* * * * * * * * *
178525 TCTAAGTTCGTGC-CTTAAATGAGATAAAGATGGATTCT-AGTAAGGATCTACATTCATTTCATG
65 TCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATTCTCAGTAA-AATCTCCATTCTTTTCATG
* * *
178588 ATTAGGCACTATAAACACAATC-TCTTCAATAGG
128 ATTAGGCACCATAAACACATTCTTC-TCATTAGG
* * ** * * *
178621 ATAAATGATATTGATGGTTTTCTTTCCCACAATTTTGCATGGAAATCTTTTCTTT--GCC-TTAT
1 ATACATGATATTGATGCTTTGGTTT--CGCAA----G-A---AAAGCTTTTCTTTCCACCGTTA-
** * * ** ** *
178683 TTTCCTTAAAATCAAAGTTTGTATTTTAAATGTGACATGCAT-AGATTCTC-GTAAAAGTCTCTA
55 -TTCGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGA-ATTCTCAGTAAAA-TCTCCA
* *
178746 TTCTTTTCATGATT-GAGAACCAAAAACACATTCCTT-TCATTAGG
117 TTCTTTTCATGATTAG-GCACCATAAACACATT-CTTCTCATTAGG
* ** * * * *
178790 ATACATGACATTGACACTTTGGTCTT-GCAAGAGAAGCTTTTGTTTCCACCGTTATT-AATAGAA
1 ATACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAA
* * * * *
178853 TCAAAGTTTGTCTCCTAAATAAGACAAACATGAATACTC-TTACTAATC-CACATTCTTTTCAGG
65 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTC-CATTCTTTTCATG
*** *
178916 ATTAGGCACCATAAACATGGTCTTCTCATAAGG
128 ATTAGGCACCATAAACACATTCTTCTCATTAGG
* * * * * *
178949 ATACATGATATTGATGCTATGGTTTCGCGAGATATGC-TTTCCTTCCAACCAATT-TGT-G-TAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-GTTAT-TCGATAA
* * ** * * * ** * * *
179010 AGT-ATGAGTTCAT-TGCTCAAATAAGACAAACATGGATTCT-TGTAGGGATCTTCACTCATTTC
63 AATCA-AAGTTTGTCT-CTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTC
* * * * * *
179072 GTCATTAGGCACTATAAACACATTCTGCCCTTTAGG
125 ATGATTAGGCACCATAAACACATTCTTCTCATTAGG
* ** * * * * * * **
179108 ATAAATGATATTGATAG-TTTTCTTTTGCATGGAAATCTTTTCCTT--GCC-TTATTTTCCTTAA
1 ATACATGATATTGAT-GCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATAA
* * * * ** * *
179169 AAGCAAAGTTTGTACT-TTATATGATACATGCATTG-ATTCTC-GTAAAAGTCTCCGTT-TTTTT
63 AATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTC
* * * *
179230 AAGATTGGGAACCAAAAACACATTCCCTTCT--TTAGG
125 ATGATTAGGCACCATAAACACATT--CTTCTCATTAGG
* * * * * * **
179266 ATTCATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTATTTCCAATGTTA-TCGATAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * * * * *
179330 CAAAATTTGCCTCTTAAATAAGATAAACATGAATACTCA-TACTAATCCCCATTCTTTTCAGGAT
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCATGAT
* * *
179394 AAGGCACCATAAACA-TTGTCTTCTCATAAGG
130 TAGGCACCATAAACACAT-TCTTCTCATTAGG
* * * * * *
179425 ATGCATGATATTGATGCTTTGGATGCGCAAGATACGC-TTTC-TTCCAACCAATT-TGT-G-TAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-GTTAT-TCGATAA
* * ** * * * * * ** * *
179485 AGT-ATGAGTTCAT-TGCTCAAATGAGACAAACTTGGATTCT-TGTAGGGATCTTCATTCATTTC
63 AATCA-AAGTTTGTCT-CTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTC
** *
179547 ATGATTAGGCATTATAAACACATTCTCCTCATTAGG
125 ATGATTAGGCACCATAAACACATTCTTCTCATTAGG
* * ** * ** * * * **
179583 ATAAATGATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTT--GCC-TTATTTTCCTTAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATAAA
* * **
179645 ATCAAAGTTTTTACT-TTAAATGAGACATGCATTG-ATTCTCA-TAAAAGTCTCCATTCTTTTCA
64 ATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTCA
* * * * *
179707 AGATTAGGAACCAAAAACACAATC-CCTGCATTAGG
126 TGATTAGGCACCATAAACACATTCTTCT-CATTAGG
* * * * * *
179742 ATGCATGACATTGATGCTTTGGTGTCGTAA-AAGAGGCTTTTCTTTCCAACGTTA-TCGATAAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAA-AAGCTTTTCTTTCCACCGTTATTCGATAAAA
* * * * * * * *
179805 TCAAAATTTATCTCTTAAATAAAACAAACTTTAATACTCA--AACTAATC-CCGTTCTTTT-AGG
65 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTAA--AATCTCCATTCTTTTCATG
* * *
179866 ATTAGGCACCATAAACAAAGTCTTCT-TTTACGG
128 ATTAGGCACCATAAACACATTCTTCTCATTA-GG
* * * * * *** * *
179899 ATGCAGGATATTGATGATTTGGTTTTGCAAGAAACG-TTTT-TTTCCCATAATT-TTTG-TAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCGTTATTCGATAAAA
* * * * * *
179960 TCTAAGTTTGTAC-CTCAAATGAGACAAACATGGATTCT-AGTAAAGATCTTCATTCATTTTGA-
65 TCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATTCTCAGTAAA-ATCTCCATTC-TTTTCAT
*
180022 GATTAGGCACTATAAACACATTC-TCTTCATTAGG
127 GATTAGGCACCATAAACACATTCTTC-TCATTAGG
* ** * ** * **
180056 ATAAATGATATTGATTG-TTTTCTTTTGCTCGAAAATCTTTTCTTT--ACC-TTATTTTCCTTAA
1 ATACATGATATTGA-TGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATAA
** * ** * * *
180117 AATCTTAGTTTGTACT-TTAAATGAGACATTCATTG-ATT-TTAGTAAAACTCCCCATTCTTTCC
63 AATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTC
* * * * **
180179 AAGATTAGG-ATCCAAAAACTCATT-TCCTTCAAAAGG
125 ATGATTAGGCA-CCATAAACACATTCTTC-TCATTAGG
* * * * * **
180215 ATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTTTTTCCACCGTTA-AAGATAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* ** * * * *
180279 CAAAGTTTGTCTCTTAAATAAGACAAACATGGATAATCA-TACTAATCCCCATTCTTTTTAGGAT
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCATGAT
* * * *
180343 TAGCCACCATAAACATAGTCTTCTCATAAGG
130 TAGGCACCATAAACACATTCTTCTCATTAGG
* * * *
180374 ATACATGATAGTGATGCTTTGGTTTCGCAAGAAACA-C-TTTCTTCCCACCAATT-TTTGA-AAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAA-AGCTTTTCTTTCCACC-GTTATTCGATAAA
* * * * * * ** * *
180435 TTCTAAA-TTCGTGC-CTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTAATTCATTTCG
64 ATC-AAAGTTTGT-CTCTTAAATAAGACAAACATGAATTCTCAGTAA-AATCTCCATTCTTTTCA
* * *
180497 TGATTAGGCACTATAAACACATTCTACTCTTTAGG
126 TGATTAGGCACCATAAACACATTCTTCTCATTAGG
* * * ** * * * * **
180532 ATAAACGATATTGATGGTTTTCTTTCGCATGAAAATCTTTTCTTT--GCCTTATATTCCTTAAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGT-TATTCGATAAAA
* ** * *
180595 TCAAAGTTTGTACT-TTAAATGAGACATGCATTG-ATTCTC-GTAAAAGTATCCATTCTTTTCAA
65 TCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTCAT
* * * *
180657 GATTGGGAACCAAAAACACATTC-CCTCCATTAGG
127 GATTAGGCACCATAAACACATTCTTCT-CATTAGG
* * *
180691 ATACAAT-ATATTGATGCTTTGGTGTT-GCAA-AAGAGGCTTTTCTTTCAAACGTTA-TCGATAA
1 ATAC-ATGATATTGATGCTTTGGT-TTCGCAAGAA-AAGCTTTTCTTTCCACCGTTATTCGATAA
* * * * *
180752 AATCAAAATTTGTCTCTTAAACAAGATAAACTTGAATACTCA-TAATAATC-CCATTCTTTTTCA
63 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTAA-AATCTCCATTC-TTTTCA
* ***
180815 AGATTAGGCACCATAAA-TGTTGTCTTC-C-TATATGG
126 TGATTAGGCACCATAAACACAT-TCTTCTCAT-TA-GG
* * * * * * ** * *
180850 ATACAGGATATTGATGATTTGGTTTCACGAGAAACGCTTTT-TTCCCACAATT-TTTG-TAAATT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * * * * * * *
180912 CTAAGTTTG-CGCCTCAAATAAGACAAGCATGGATTCT-AGTAAAGATCTTCGTTCATTTCGTGA
66 CAAAGTTTGTC-TCTTAAATAAGACAAACATGAATTCTCAGTAAA-ATCTCCATTCTTTTCATGA
* * * *
180975 TTAGGCACTATAAACGCATTCTCCTAATTAGG
129 TTAGGCACCATAAACACATTCTTCTCATTAGG
* * ** * ** * * * **
181007 ATAAATGATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTT--GCC-TTATTTTCCTTAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATAAA
** *
181069 ATCAAAGTTTGTACT-TTAAATGAA-ACATGCATTG-ATGCTCA-TAAAAGTCTCCATTCTTTTC
64 ATCAAAGTTTGT-CTCTTAAAT-AAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTC
* * * *
181130 AAGATTAGGAACCAAAAACACAATC-TCTACATTAGG
125 ATGATTAGGCACCATAAACACATTCTTCT-CATTAGG
* * * * * * * * * *
181166 ATACATGACATTGATGTTTTGGTGTCGGAAGAGAGGCTTTCCTTTCCAACGGTA-TCGGTAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
** * * * * *
181230 CAAAAATTGTCTCTTAAATAAGACAAACTTGAATACTCA-TACTAATCCCCATTCTTTTCAGGAT
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTCCATTCTTTTCATGAT
** * * *
181294 TAGGCACCATAAACGTAGTCATCTCATAAGG
130 TAGGCACCATAAACACATTCTTCTCATTAGG
* * * * * *
181325 ATACAAGATAGTGATGCTTTGGTTTCACAAGAAACA-C-TTTCTTCCCACCAATT-TTTG-TAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAA-AGCTTTTCTTTCCACC-GTTATTCGATAAA
* * * * * * * *
181386 TTCTAAGTTCCTG-C-CTCAAATGAGACAAACTTGGATTCT-AGTAAGGATCT-CATTCATTTCA
64 ATCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATTCTCAGTAA-AATCTCCATTCTTTTCA
* * * * *
181447 TGATTAGGCACTATAAATACAATCTCCTCCTTAGG
126 TGATTAGGCACCATAAACACATTCTTCTCATTAGG
* * * ** * * * ** **
181482 ATAAATGATATTAATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCA-TATT-TTCCCTAAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCGTTATTCGATAAAA
* **
181545 TCAATGTTTGTACT-TTAAATGAA-ACATGCATTG-ATTCTC-GTAAAAGTCTCCATTCTTTTCA
65 TCAAAGTTTGT-CTCTTAAAT-AAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTCA
* * * *
181606 AGATTGGGAACCATAAACACATTC-CCTCCATTAGG
126 TGATTAGGCACCATAAACACATTCTTCT-CATTAGG
* * * *
181641 ATACAAT-ACATTGATGCTTTGGTGTCGCAA-AAGAGGCTTTTCTTTCCAACGTTA-TCGATAAA
1 ATAC-ATGATATTGATGCTTTGGTTTCGCAAGAA-AAGCTTTTCTTTCCACCGTTATTCGATAAA
* * * * *
181703 ATCAAAATTTGTCTCTTAAATAAGATAAACTTGAATACTCA-TAATAATC-CCATTCTTTTTCAG
64 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTAA-AATCTCCATTC-TTTTCAT
** *
181766 GATTAGGCACCATAAAC-GTTGTCTTCTTA-TATGG
127 GATTAGGCACCATAAACACAT-TCTTCTCATTA-GG
* * * * * *** * * *
181800 ATACAGGATATTGATGATTTGGTTTCACGAGAAACGC-TTT-TTTCTCATAATTTTTTG-TAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTC-CACCGTTATTCGATAAAA
* * * * * * * * *
181862 TCTAAGTTTG-CGCCTCAAATAAGACAAGCATGGATTCT-AGTAAAGATCTTCGTTCATTTCGTG
65 TCAAAGTTTGTC-TCTTAAATAAGACAAACATGAATTCTCAGTAAA-ATCTCCATTCTTTTCATG
** * * * *
181925 ATTAGGTTCTATAAACGCATTCTCCTTATTAGG
128 ATTAGGCACCATAAACACATTCTTCTCATTAGG
* * ** * ** * * **
181958 ATAAATGATATTGATGGTTTTCTTTTGCTTGAAAATCTTTTCTTT--GCC-TTATTTTCCTTAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATAAA
* ***
182020 ATCAAAGATTGTACT-TTAAATGAA-ACTTGCATTG-ATTCTCA-TAAAAGTCTCCATTCTTTTC
64 ATCAAAGTTTGT-CTCTTAAAT-AAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTC
* * * * * *
182081 AAGAGTAGGAACCAAAAACACAATC-CCTACATTAGG
125 ATGATTAGGCACCATAAACACATTCTTCT-CATTAGG
** * * * * * * * * *
182117 ATACATGGCATTGATGTTTTGGTGTCGGAAGAGAGGCTTTCCTTTCCAACGATA-TCGCTAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
** * * * * *
182181 CAAAAATTGTCTCTTAAATAGGATAAACTTGAATACTCA-TACTAATC-CTCATTCTTTTCATGA
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTC-CATTCTTTTCATGA
* * * *
182244 TTAGGCACCATAAACATAGTCATCTCATAAGG
129 TTAGGCACCATAAACACATTCTTCTCATTAGG
* * * *
182276 ATACAAGATAGTGATGCTTTGGTTTCGCAAGAAACA-C-TTTC-TTCCAACCAATT-TTTG-TAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAA-AGCTTTTCTTTCC-ACC-GTTATTCGATAA
* * * * * * * * * *
182336 ATTCTAAGTTCCTG-C-CTCAAGTGAGACAAACTTGGATTCT-AGTAAGGATCTTCATTCATTTC
63 AATCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATTCTCAGTAA-AATCTCCATTCTTTTC
* * * *
182398 GTGATTAGGCACTATAAACACATTCTCCTCCTTAGG
125 ATGATTAGGCACCATAAACACATTCTTCTCATTAGG
* * * ** * * * * **
182434 ATAAATGATATTCATGGTTTTCTTTTGCATGAAAATCTTTTCTTT--GCC-TTATTTTCCTTAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTA--TTCGATAAA
* * ** *
182496 ATCAAAGTTTG-CACTTTAAATGAGACATGCATTG-ATTCTC-GTAAAAGTCTCCTTTCTTTTCA
64 ATCAAAGTTTGTCTC-TTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTTCA
* * * * *
182558 AGATTGGGAACCAAAAAAAACACATTC-TCTTCGTTAGG
126 TGATTAGGCACC---ATAAACACATTCTTC-TCATTAGG
* ** ** * * * * * *
182596 ATGCATGACGTTGATGCTTTGGAGTCGCAAGAGAAGATGTTCTTTCCACCATTATT-TATAGAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * ** *
182660 CAAAGGTTGTCTCTTAAATAAAACAAACTTGAATAGTCA-TATTAATC-CACATTCTTTTC-TAG
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAATCTC-CATTCTTTTCAT-G
* * * * *
182722 ATTAGGCACCAGAAACATAGTCTTATCATAAGG
128 ATTAGGCACCATAAACACATTCTTCTCATTAGG
* * * *** * * * ** * *
182755 ATGCAGGATATTGATTCTTTGGTTTCGTGGGAAACGC-TCTCTTCCCACTAATT-TTTG-TAAAG
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCAC-CGTTATTCGATAAAA
* * * * * ** * *
182817 T-ATAAGTTCTTTC-CTCAAATGAGACAAACATGGATTCT-AGTAAGGATCTTTATTCATTTCGT
65 TCA-AAGTT-TGTCTCTTAAATAAGACAAACATGAATTCTCAGTAA-AATCTCCATTCTTTTCAT
* * *
182879 GATTAGGCACC-TAAACACATTCTCCCCATTGGG
127 GATTAGGCACCATAAACACATTCTTCTCATTAGG
* * ** ** ** * * * * **
182912 ATAAATGATATTGATGGTTTTCTTTTACTTGGAAATCTTTTATTTGCCTCAC--T-TTCCTTAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCAC-CGTTATTCGATAAA
* * *
182974 ATCAAAGTTTGTACT-TTAAATGAGACAAGCATTG-ATTCTC-GTAAAAGTCTCCCTT-TTTTCC
64 ATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATTCTCAGTAAAA-TCTCCATTCTTTT-C
* * * * *
183035 AAGATTGGGAACCAAAAACACTTTC-TCTTCATTAGG
125 ATGATTAGGCACCATAAACACATTCTTC-TCATTAGG
* * * * *
183071 ATATATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAAT-GATAAAAT
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
* * * * * * *
183135 CAAAGTCTATCTCTTAAATAAGATAAACATGAATACTCA-CACTAATAC-CCATTCTTTTCAGGA
66 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTA-AAAT-CTCCATTCTTTTCATGA
* * * *
183198 TTAGGCACTATAAACATAGTCTTCTCATAAGG
129 TTAGGCACCATAAACACATTCTTCTCATTAGG
** * * *
183230 ATACGGGATATTGATGATTTGGTCTAGCAAGAAA
1 ATACATGATATTGATGCTTTGGTTTCGCAAGAAA
183264 TGGTTTTTTC
Statistics
Matches: 6371, Mismatches: 1909, Indels: 1236
0.67 0.20 0.13
Matches are distributed among these distances:
152 3 0.00
153 44 0.01
154 157 0.02
155 276 0.04
156 234 0.04
157 840 0.13
158 1683 0.26
159 2693 0.42
160 157 0.02
161 34 0.01
162 126 0.02
163 7 0.00
164 3 0.00
165 6 0.00
167 7 0.00
168 9 0.00
169 88 0.01
170 3 0.00
171 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (160 bp):
ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCGTTATTCGATAAAAT
CAAAGTTTGTCTCTTAAATAAGACAAACATGAATTCTCAGTAAAATCTCCATTCTTTTCATGATT
AGGCACCATAAACACATTCTTCTCATTAGG
Found at i:179653 original size:475 final size:476
Alignment explanation
Indices: 177564--183300 Score: 7468
Period size: 476 Copynumber: 12.0 Consensus size: 476
177554 TTTTCCCCAT
** * *
177564 AATTTTTGTAAATTCTAAGTTAGTGCCTCAAATGAGACAAACATGGATTCAAGTAATGATCTTCA
1 AATTTTTGTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
* * *
177629 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCACTAAGATACATGATATTGATGGCTTT
66 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGG-TTT
* * *
177694 T-TCTTGCATGGAATTCTTTTCTTTGTCTTATTTTCCTT-AAATCAAAGTTTGTACTTTAAATGA
130 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA
* * *
177757 GACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAAACATTCAC
195 GACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCC
* * *
177822 TACATTACGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAATGTTATC
260 TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATC
*
177887 GATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAAT-CCCATTCCTT
325 GATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCTTT
* * * * * *
177951 TCAGGTTTAGGTACCATAAACAAAGTCTTCTTATACGGATGCAGGATATTGATGATTTGGTTTAC
390 TCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTT-C
*
178016 -CAAGAAACG-TTTTTTCCCA-C
454 GCAAGAAACGCTTTCTTCCCACC
* * * * * *
178036 AATTTTTATAAATTCTAAATTCGTGCCTTAAATGAGACAAACATTGATTCTAGTAAAGATCTTCA
1 AATTTTTGTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
* * *
178101 TTCATTTCGTAATTAGGCACTATAAACACATTCTCCTCATTAGGATACATGATATTGATGGCTTT
66 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
** * *
178166 CTCCTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATGAAAGTTTGTACATTAAATGAG
131 CTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
* * *
178231 ACATGCATTGATTCTTGTAAAAGTCTCCATTCTTTT-AATGATTGGGAACCAAAAGCACATTTCC
196 ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA-GATTGGGAACCAAAAACACATTCCC
* * * * * *
178295 TTTATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTGTTTCCACCGTTAAT
260 TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTT-AT
* * *
178360 -GATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAGACTAATCCCCATTCTT
324 CGATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCTT
* * *
178424 TTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAAAGGATATTGATGATTTGGTTTT
389 TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * *
178489 GCAAGAAAGGCTTTTTTCCCACT
454 GCAAGAAACGCTTTCTTCCCACC
* * * * * * *
178512 AGTTTTTCTAAATTCTAAGTTCGTGCCTTAAATGAGATAAAGATGGATTCTAGTAAGGATCTACA
1 AATTTTTGTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
* * * *
178577 TTCATTTCATGATTAGGCACTATAAACACAATCTCTTCAATAGGATAAATGATATTGATGGTTTT
66 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGG---T
*
178642 CTTTCCCACAATTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAT
128 -TTT----C--TTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * *
178707 TTTAAATGTGACATGCATAGATTCTCGTAAAAGTCTCTATTCTTTTCATGATTGAGAACCAAAAA
186 TTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
* ** * * * *
178772 CACATTCCTTTCATTAGGATACATGACATTGACACTTTGGTCTTGCAAGAGAAGCTTTTGTTTCC
251 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCC
* ** * * * * *
178837 ACCGTTATTAATAGAATCAAAGTTTGTCTCCTAAATAAGACAAACATGAATACTCTTACTAATCC
316 AACGTTATCGATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCC
* * * *
178902 ACATTCTTTTCAGGATTAGGCACCATAAACATGGTCTTCTCATAAGGATACATGATATTGATGCT
381 CCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGAT
* * * * *
178967 ATGGTTTCGCGAGATATGCTTTCCTTCCAACC
446 TTGGTTTCGCAAGAAACGCTTT-CTTCCCACC
* * * * * * *
178999 AATTTGTGTAAAGTATGAGTTCATTG-CTCAAATAAGACAAACATGGATTCTTGTAGGGATCTTC
1 AATTTTTGTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
* * * *
179063 ACTCATTTCGTCATTAGGCACTATAAACACATTCTGCC-CTTTAGGATAAATGATATTGATAGTT
65 ATTCATTTCGTGATTAGGCACTATAAACACATTCT-CCTCATTAGGATAAATGATATTGATGGTT
* * *
179127 TTCTTTTGCATGGAAATCTTTTCCTTGCCTTATTTTCCTTAAAAGCAAAGTTTGTACTTTATATG
129 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
* * *
179192 ATACATGCATTGATTCTCGTAAAAGTCTCCGTT-TTTTTAAGATTGGGAACCAAAAACACATTCC
194 AGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCC
* * * *
179256 CTTCTTTAGGATTCATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTATTTCCAATGTTAT
259 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTAT
* * *
179321 CGATAAAATCAAAATTTGCCTCTTAAATAAGATAAACATGAATACTCATACTAATCCCCATTCTT
324 CGATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCTT
* * * * * * *
179386 TTCAGGATAAGGCACCATAAACATTGTCTTCTCATAAGGATGCATGATATTGATGCTTTGGATGC
389 TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* *
179451 GCAAGATACGCTTTCTTCCAACC
454 GCAAGAAACGCTTTCTTCCCACC
* * * * * * *
179474 AATTTGTGTAAAGTATGAGTTCATTG-CTCAAATGAGACAAACTTGGATTCTTGTAGGGATCTTC
1 AATTTTTGTAAATTCTAAGTTC-TTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
* *
179538 ATTCATTTCATGATTAGGCATTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTT
65 ATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTT
* *
179603 TCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTTTACTTTAAATGA
130 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA
* * *
179668 GACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAATCCC
195 GACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCC
* * * *
179733 TGCATTAGGATGCATGACATTGATGCTTTGGTGTCGTAAAAGAGGCTTTTCTTTCCAACGTTATC
260 TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATC
* * * * *
179798 GATAAAATCAAAATTTATCTCTTAAATAAAACAAACTTTAATACTCAAACTAAT-CCCGTTCTTT
325 GATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCTTT
* ** * * *
179862 T-AGGATTAGGCACCATAAACAAAGTCTTCTTTTACGGATGCAGGATATTGATGATTTGGTTTTG
390 TCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCG
* * *
179926 CAAGAAACGTTTTTTTCCCA-T
455 CAAGAAACGCTTTCTTCCCACC
* *
179947 AATTTTTGTAAATTCTAAGTT-TGTACCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTC
1 AATTTTTGTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
* * * *
180011 ATTCATTTTGAGATTAGGCACTATAAACACATTCTCTTCATTAGGATAAATGATATTGATTGTTT
65 ATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTT
* * **
180076 TCTTTTGC-TCGAAAATCTTTTCTTTACCTTATTTTCCTTAAAATCTTAGTTTGTACTTTAAATG
130 TCTTTTGCAT-GGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
* * * * * * * * * *
180140 AGACATTCATTGATTTTAGTAAAACTCCCCATTCTTTCCAAGATTAGGATCCAAAAACTCATTTC
194 AGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCC
** * * * * *
180205 CTTCAAAAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTTTTTCCACCGTTAA
259 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTAT
* * * * *
180270 AGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGGATAATCATACTAATCCCCATTCTT
324 CGATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCTT
* * * * *
180335 TTTAGGATTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATAGTGATGCTTTGGTTTC
389 TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
*
180400 GCAAGAAACACTTTCTTCCCACC
454 GCAAGAAACGCTTTCTTCCCACC
* * * *
180423 AATTTTTGAAAATTCTAAATTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTAA
1 AATTTTTGTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
* * *
180488 TTCATTTCGTGATTAGGCACTATAAACACATTCTACTCTTTAGGATAAACGATATTGATGGTTTT
66 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
* * *
180553 CTTTCGCATGAAAATCTTTTCTTTGCCTTATATTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
131 CTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
*
180618 ACATGCATTGATTCTCGTAAAAGTATCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
196 ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
* * * * *
180683 CCATTAGGATACAAT-ATATTGATGCTTTGGTGTTGCAAAAGAGGCTTTTCTTTCAAACGTTATC
261 TCATTAGGATAC-ATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATC
* * *
180747 GATAAAATCAAAATTTGTCTCTTAAACAAGATAAACTTGAATACTCATAATAAT-CCCATTCTTT
325 GATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTC-TT
* ** * *
180811 TTCAAGATTAGGCACCATAAATGTTGTCTTC-CTATATGGATACAGGATATTGATGATTTGGTTT
389 TTCAGGATTAGGCACCATAAACATAGTCTTCTC-ATAAGGATACAGGATATTGATGATTTGGTTT
* * *
180875 CACGAGAAACGCTTTTTTCCCA-C
453 CGCAAGAAACGCTTTCTTCCCACC
* * * *
180898 AATTTTTGTAAATTCTAAGTT-TGCGCCTCAAATAAGACAAGCATGGATTCTAGTAAAGATCTTC
1 AATTTTTGTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTC
* * *
180962 GTTCATTTCGTGATTAGGCACTATAAACGCATTCTCCTAATTAGGATAAATGATATTGATGGTTT
65 ATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTT
*
181027 TCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA
130 TCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA
* * * * * *
181092 AACATGCATTGATGCTCATAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAATCTC
195 GACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCC
* * * * *
181157 TACATTAGGATACATGACATTGATGTTTTGGTGTCGGAAGAGAGGCTTTCCTTTCCAACGGTATC
260 TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATC
* *
181222 GGTAAAATCAAAAATTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCTTT
325 GATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCTTT
* * * * * *
181287 TCAGGATTAGGCACCATAAACGTAGTCATCTCATAAGGATACAAGATAGTGATGCTTTGGTTTCA
390 TCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCG
*
181352 CAAGAAACACTTTCTTCCCACC
455 CAAGAAACGCTTTCTTCCCACC
* *
181374 AATTTTTGTAAATTCTAAGTTCCTGCCTCAAATGAGACAAACTTGGATTCTAGTAAGGATC-TCA
1 AATTTTTGTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
* * * * *
181438 TTCATTTCATGATTAGGCACTATAAATACAATCTCCTCCTTAGGATAAATGATATTAATGGTTTT
66 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
* * * * *
181503 CTTTTGCATGAAAATCTTTTCTTTGCCATATTTTCCCTAAAATCAATGTTTGTACTTTAAATGAA
131 CTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
*
181568 ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCATAAACACATTCCCT
196 ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
* *
181633 CCATTAGGATACAAT-ACATTGATGCTTTGGTGTCGCAAAAGAGGCTTTTCTTTCCAACGTTATC
261 TCATTAGGATAC-ATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATC
* *
181697 GATAAAATCAAAATTTGTCTCTTAAATAAGATAAACTTGAATACTCATAATAAT-CCCATTCTTT
325 GATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTC-TT
* * * *
181761 TTCAGGATTAGGCACCATAAACGTTGTCTTCTTATATGGATACAGGATATTGATGATTTGGTTTC
389 TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * * * *
181826 ACGAGAAACGCTTTTTTCTCA-T
454 GCAAGAAACGCTTTCTTCCCACC
* * * *
181848 AATTTTTTGTAAATTCTAAGTT-TGCGCCTCAAATAAGACAAGCATGGATTCTAGTAAAGATCTT
1 AA-TTTTTGTAAATTCTAAGTTCT-TGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTT
* ** * *
181912 CGTTCATTTCGTGATTAGGTTCTATAAACGCATTCTCCTTATTAGGATAAATGATATTGATGGTT
64 CATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTT
* * *
181977 TTCTTTTGCTTGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATG
129 TTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATG
* * * * * *
182042 AAACTTGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGAGTAGGAACCAAAAACACAATCC
194 AGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCC
* * * * * *
182107 CTACATTAGGATACATGGCATTGATGTTTTGGTGTCGGAAGAGAGGCTTTCCTTTCCAACGATAT
259 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTAT
* * * * *
182172 CGCTAAAATCAAAAATTGTCTCTTAAATAGGATAAACTTGAATACTCATACTAATCCTCATTCTT
324 CGATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCTT
* * * * *
182237 TTCATGATTAGGCACCATAAACATAGTCATCTCATAAGGATACAAGATAGTGATGCTTTGGTTTC
389 TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* *
182302 GCAAGAAACACTTTCTTCCAACC
454 GCAAGAAACGCTTTCTTCCCACC
* * *
182325 AATTTTTGTAAATTCTAAGTTCCTGCCTCAAGTGAGACAAACTTGGATTCTAGTAAGGATCTTCA
1 AATTTTTGTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
* *
182390 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCCTTAGGATAAATGATATTCATGGTTTT
66 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
* *
182455 CTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGCACTTTAAATGAG
131 CTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
*
182520 ACATGCATTGATTCTCGTAAAAGTCTCCTTTCTTTTCAAGATTGGGAACCAAAAAAAACACATTC
196 ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACC---AAAAACACATTC
* * * * * * * * * *
182585 TCTTCGTTAGGATGCATGACGTTGATGCTTTGGAGTCGCAAGAGAAGATGTTCTTTCCACCATTA
258 CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTA
** * ** * * * *
182650 TTTATAGAATCAAAGGTTGTCTCTTAAATAAAACAAACTTGAATAGTCATATTAATCCACATTCT
323 TCGATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCT
* * * **
182715 TTTCTA-GATTAGGCACCAGAAACATAGTCTTATCATAAGGATGCAGGATATTGATTCTTTGGTT
388 TTTC-AGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTT
*** * *
182779 TCGTGGGAAACGCTCTCTTCCCACT
452 TCGCAAGAAACGCTTTCTTCCCACC
* * * *
182804 AATTTTTGTAAAGTATAAGTTCTTTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTTA
1 AATTTTTGTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
* * *
182869 TTCATTTCGTGATTAGGCAC-CTAAACACATTCTCCCCATTGGGATAAATGATATTGATGGTTTT
66 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
* * * * *
182933 CTTTTACTTGGAAATCTTTTATTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
131 CTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
* * * *
182998 ACAAGCATTGATTCTCGTAAAAGTCTCCCTT-TTTTCCAAGATTGGGAACCAAAAACACTTTCTC
196 ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT-CAAGATTGGGAACCAAAAACACATTCCC
* * *
183062 TTCATTAGGATATATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTAAT
260 TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTT-AT
* * * * * * *
183127 -GATAAAATCAAAGTCTATCTCTTAAATAAGATAAACATGAATACTCACACTAATACCCATTCTT
324 CGATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCTT
* * * *
183191 TTCAGGATTAGGCACTATAAACATAGTCTTCTCATAAGGATACGGGATATTGATGATTTGGTCTA
389 TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTC
* * *
183256 GCAAGAAATGGTTTTTTCCCACC
454 GCAAGAAACGCTTTCTTCCCACC
*
183279 AATTTTTGTAAATTCAAAGTTC
1 AATTTTTGTAAATTCTAAGTTC
183301 ATGCTTAAAA
Statistics
Matches: 4584, Mismatches: 623, Indels: 113
0.86 0.12 0.02
Matches are distributed among these distances:
471 4 0.00
472 154 0.03
473 504 0.11
474 166 0.04
475 1346 0.29
476 1490 0.33
477 101 0.02
478 140 0.03
479 265 0.06
480 4 0.00
483 3 0.00
484 2 0.00
485 2 0.00
486 294 0.06
487 106 0.02
488 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (476 bp):
AATTTTTGTAAATTCTAAGTTCTTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCA
TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTT
CTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
ACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCG
ATAAAATCAAAATTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCCCATTCTTTT
CAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAGGATATTGATGATTTGGTTTCGC
AAGAAACGCTTTCTTCCCACC
Found at i:185093 original size:159 final size:158
Alignment explanation
Indices: 184070--187896 Score: 1037
Period size: 159 Copynumber: 24.2 Consensus size: 158
184060 AGTTCATGCG
* * * * *
184070 TAAAAGTCTCCATTCATTTCAAGATTGGGAACCAAAAACACA-TTCCTTTCATTAGGATACTTGA
1 TAAAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACATTTCC-TTCATTAGGATACATGA
* * ** * * *
184134 CATTGATGCTTT-GTTGTCGCAAGAGAGGGCTTTTCTTT-CC-AACGTTATCGGTAAAATCAAAA
65 TATTGATGGTTTGGTT-TCGC-AG-GAAAGCTTTTCTTTGCCTAA-TTTTTC-GTAAAATCAAAG
* *
184196 TTTGT-CTCTTAAATAATACAAAC-TTGAATACTCA
125 TTTGTACT-TTAAATAAGACAAACATTG-ATTCTCA
* ** * *
184230 TACTAA-TC-CCATTCTTTTCGGGATTAGGCACCATAAACATAGTCTT-CTT-A-TACGGATATA
1 TA-AAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACA-T-TTCCTTCATTA-GGATACA
* * * * * * *
184290 GGATATTGATGATTTAGTTTCTCAGGAAACGC-TTT-TTTCCCTTAATTTTT-GTAAATTCTAAG
62 TGATATTGATGGTTTGGTTTCGCAGGAAA-GCTTTTCTTTGCC-TAATTTTTCGTAAAATCAAAG
** * * * * * *
184352 TCCGTGCCTCAAATGAGACAAACATGGATCCT-A
125 TTTGTACTTTAAATAAGACAAACATTGATTCTCA
* * * ** * * * *
184385 GT-AAGGATCTTCATTCATTTCGTGATTAGACACTATAAACATATTCTCC-TCATTAGGATAAAT
1 -TAAAAG-TCTCCATTCTTTTCAAGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACAT
* ** * * * * * *
184448 GATATTGATAGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTA-TTTTCATTAAAACCAAAGT
63 GATATTGATGGTTTGGTTTCGCA-GGAAAGCTTTTCTTTGCCTAATTTTTC-GTAAAATCAAAGT
* ** *
184512 TTGTACTTTAAATGAGACATGCATTGATTCTCG
126 TTGTACTTTAAATAAGACAAACATTGATTCTCA
** * * * *
184545 TAAAAGTCTCTTTTCTTTTCAAGATTGGGAACCAAAAAAACACA-TTCTCTTCATTAGGATGCAT
1 TAAAAGTCTCCATTCTTTTCAAGATTAGGCACC--ATAAACACATTTC-CTTCATTAGGATACAT
** * * * * * * * * *
184609 GACGTTGATGCTTTGGTGTCCCAAGAGAAGCTGTTCTTT--CTACCGTTATTT-ATAGAATTAAA
63 GATATTGATGGTTTGGTTTCGCAGGA-AAGCTTTTCTTTGCCTA--ATT-TTTCGTAAAATCAAA
* **
184671 GTTTGT-CTCTTAAATAAAACAAAC-TTGAATAGTCA
124 GTTTGTACT-TTAAATAAGACAAACATTG-ATTCTCA
* * * * * * * * *
184706 TATTAA-TCTACATTCTTTTCTAGATTAGGCACTAGAAACATAGTCTT-C-TAATAAGGATAAAT
1 TA-AAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACAT
** ** * * * *
184768 GATATTGATTCTTTGGTTTCGTGGGAAACGC-TCTC-TTCCCAGCAATTTTT-GTAAAGT-ATAA
63 GATATTGATGGTTTGGTTTCGCAGGAAA-GCTTTTCTTTGCC--TAATTTTTCGTAAAATCA-AA
** * * * *
184829 GTTCATTCCTTAAATGAGACAAACATGGATTCT-A
124 GTTTGTACTTTAAATAAGACAAACATTGATTCTCA
* ** * ** * *
184863 GT-AAGGATCTTTTATTCATTTCGTGATTAGGCACCATAAACACATTCTCC-ACATTAGGATAAA
1 -TAAAAG-TC-TCCATTCTTTTCAAGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACA
** * * * *
184926 TGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTTCTTAAAATCAAAGT
62 TGATATTGATGGTTTGGTTTCGCA-GGAAAGCTTTTCTTTGCCTAATTTTTCGTAAAATCAAAGT
**
184991 TTGTACTTTAAATAAGACATGCATTGATTCTCA
126 TTGTACTTTAAATAAGACAAACATTGATTCTCA
* * * *
185024 TAAAAGTCTCCGTTCTTTTCAAGATTAGGAACCAAAAACACATTTCCTTCATTAGGATACATGAA
1 TAAAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACATTTCCTTCATTAGGATACATGAT
* * ** * * *
185089 ATTGATGCTTTGGTGTCATAGGAGAGGCTTTTCTTT-CC-AACGTTATCGATAAAATCAAAGTTT
66 ATTGATGGTTTGGTTTCGCAGGA-AAGCTTTTCTTTGCCTAA-TTTTTCG-TAAAATCAAAGTTT
* * *
185152 GT-CTCTTAAATAAGACAAGCA-TGAATACTTA
128 GTACT-TTAAATAAGACAAACATTG-ATTCTCA
* * * * * *
185183 TACTAA-TCCCCATTCTTTTCAGGATTAGGCGCCATAAACATAATCTT-C-TCATAAGGATACAT
1 TA-AAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACA-CAT-TTCCTTCATTAGGATACAT
* * * * ** * ** * *
185245 GATATTGATGCTTTGGTTTCACAAGATACGC-TTTCTTCCCACCAA-TTTGGGT-AAATTATGAG
63 GATATTGATGGTTTGGTTTCGCAGGA-AAGCTTTTCTTTGC-CTAATTTTTCGTAAAATCA-AAG
* * * * * **
185307 TTCAT-TGC-TCAATTGAGACAAACATGGATTCTTG
125 TT--TGTACTTTAAATAAGACAAACATTGATTCTCA
** * * ** * * *
185341 T-AGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC-TCTTTAGGATAAATG
1 TAAAAG-TCTCCATTCTTTTCAAGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACATG
** * * * *
185404 ATATTGATGGTTTTCTTTTGCATGGAAATG-TTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
64 ATATTGATGGTTTGGTTTCGCA-GGAAA-GCTTTTCTTTGCCTAATTTTTCGTAAAATCAAAGTT
* ** *
185468 TGTACTTTAAATGAGACATGCATTGATTCTCG
127 TGTACTTTAAATAAGACAAACATTGATTCTCA
* * * * * * * *
185500 TAAACGTCTTCATTCCTTTCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGAC
1 TAAAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACATTTCCTTCATTAGGATACATGA-
** * * * * * * *
185565 T-TTGATACTTTGGTGTCGCAAGAGAGGCTTTTCTTT-CC-AACGTTATCGATAAAATTAAAATT
65 TATTGATGGTTTGGTTTCGCAGGA-AAGCTTTTCTTTGCCTAA-TTTTTCG-TAAAATCAAAGTT
* * *
185627 TGT-CTCTTAAATAAGATAAAC-TTGAATACTCG
127 TGTACT-TTAAATAAGACAAACATTG-ATTCTCA
* * * *
185659 TACTAA-TC-CCATTCTTTTAAAGATTAGGCACCCTAAACATAGTCTT-CTT-A-TATGGATACA
1 TA-AAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACA-T-TTCCTTCATTA-GGATACA
* * * * * *
185719 GGATATTGATGATTTGGTTTCGCGAGGAACGC-TTT-TTTCCCACAATTTTT-GTAAATTCTAAA
62 TGATATTGATGGTTTGGTTTCGC-AGGAAAGCTTTTCTTTGCC-TAATTTTTCGTAAAATC-AAA
* * * * *
185781 -TTTGTGCCTCAAATGAGACAAACATGGATTCT-A
124 GTTTGTACTTTAAATAAGACAAACATTGATTCTCA
* * * * * * *
185814 GT-AAAGACCTTCGTTCATTTCATGATTAGGCACTATAAACACATTCTCGC--CATTAGGATAAA
1 -TAAAAG-TCTCCATTCTTTTCAAGATTAGGCACCATAAACACATT-TC-CTTCATTAGGATACA
** ** * * * * *
185876 TGATATTGATGGTTTTCTTTTTCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
62 TGATATTGATGGTTTGGTTTCGCAGGAAAGCTTTTCTTTGCCTAATTTTTCGTAAAATCAAAGTT
* * * ** *
185941 TGTACTTTATATGAGATATGCATTGATTCTCG
127 TGTACTTTAAATAAGACAAACATTGATTCTCA
* * * * * * * * *
185973 TAAAAGTCTCCATTCCTTTCAAGAATGGGAACCAAAAACACATTCCCTTTATTGGGATACATGAC
1 TAAAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACATTTCCTTCATTAGGATACATGAT
* * * * * *
186038 ATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTT-CC-AA-----CGTAAAATCAAAATTTAT
66 ATTGATGGTTTGGTTTCGCAGGA-AAGCTTTTCTTTGCCTAATTTTTCGTAAAATCAAAGTTTGT
* *
186096 -CTCTTAAATAAGATAAAC-TTGAATACTCA
130 ACT-TTAAATAAGACAAACATTG-ATTCTCA
* * * * *
186125 TACTAA-TC-CCTTTTTTTTCAGGATTAGGCACCATAAACATAGTCTT-CTT-A-TACGGATACA
1 TA-AAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACA-T-TTCCTTCATTA-GGATACA
* * * * * * * *
186185 AGATATTGATGATTTGGTTTCGCAAGAAA-CTCTTT-TTTCCCACAAGTTTT-GTAAATTCTAAG
62 TGATATTGATGGTTTGGTTTCGCAGGAAAGCT-TTTCTTTGCC-TAATTTTTCGTAAAATCAAAG
* * * * *
186247 TTTGTGCCTCAAATGAGACAAACATGGATTCT-A
125 TTTGTACTTTAAATAAGACAAACATTGATTCTCA
* * * * * * *
186280 GT-AAAGATCTTCGTTCATTTCATGATTAGGCACTATAATCACATTCTCC-TCATTAGGATAAAT
1 -TAAAAG-TCTCCATTCTTTTCAAGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACAT
* ** ** * * * * * * *
186343 GATAATGATGGTTTTCTTTTACTTGAAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTT
63 GATATTGATGGTTTGGTTTCGC-AGGAAAGCTTTTCTTTGCCTAATTTTTCGTAAAATCAAAGTT
** * * *
186408 TGTACTTTAAATGAA-ACATGCTTTGATTGTCG
127 TGTACTTTAAAT-AAGACAAACATTGATTCTCA
* * * * * * * *
186440 TAAAAGTCTTCATTCTTTTCAAGATTCGGAACCAAAAACACAATCCCTGCATTAGGATACATGAC
1 TAAAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACATTTCCTTCATTAGGATACATGAT
* * * * * * * * *
186505 ATTCATGCTTTGGTGTGGCAAGAAAGGTTTTTCTTT-CC-AACGTTATCGGTAAAATCAAAATTT
66 ATTGATGGTTTGGTTTCGCAGGAAA-GCTTTTCTTTGCCTAA-TTTTTC-GTAAAATCAAAGTTT
* * * *
186568 AT-CTCTTAAATAAAACAAAC-TTCAATACTCA
128 GTACT-TTAAATAAGACAAACATT-GATTCTCA
* ** * * **
186599 TACTAA-TC-CTGTTCTTTT-AGGATTAGGCACCATAAACAAAGTCTT-CTT--TTACGGATGTA
1 TA-AAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACA-T-TTCCTTCATTA-GGATACA
* * * * * * * *
186658 GGATATTGATGATTTGGTTTCACAAGAAATGC-TTT-TTTCCCACAATTTTT-GTAAATTCTAAG
62 TGATATTGATGGTTTGGTTTCGCAGGAAA-GCTTTTCTTTGCC-TAATTTTTCGTAAAATCAAAG
* * * * *
186720 TTCGTACCTCAAATTAGACAAACATGGATTCT-A
125 TTTGTACTTTAAATAAGACAAACATTGATTCTCA
* * * *
186753 GT-AAAGATCTTCATTCATTTT-GAGATTAGGCACTATAAACACATTCTCC-TCATTAGGATAAA
1 -TAAAAG-TCTCCATTC-TTTTCAAGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACA
** ** * * * * * * *
186815 TGAT-TATGATGGTTTTCTTTTACTTGAAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAG
62 TGATAT-TGATGGTTTGGTTTCGC-AGGAAAGCTTTTCTTTGCCTAATTTTTCGTAAAATCAAAG
* * * * ** *
186879 TGTGCACTTTAAATGAGATATGCATTGATTCTCG
125 TTTGTACTTTAAATAAGACAAACATTGATTCTCA
* * * * *
186913 TAAAAGTCTCCTTTCTTTTCAAGATTGGGAACCAACAAAACACA-TTCTCTTCATTAGGATGCAT
1 TAAAAGTCTCCATTCTTTTCAAGATTAGGCACC-A-TAAACACATTTC-CTTCATTAGGATACAT
** * * * * *
186977 GAGGTTGATGCTTTGGTGTCGCAAGAGAAGCTATTT-TTT-CC-ACCATTATTT-ATAGAATCAA
63 GATATTGATGGTTTGGTTTCGCAGGA-AAGCT-TTTCTTTGCCTA--ATT-TTTCGTAAAATCAA
* * **
187038 AGTTTGT-CTCTTAAATAAAACAAAC-CTGAATAGTCA
123 AGTTTGTACT-TTAAATAAGACAAACATTG-ATTCTCA
* * * * *
187074 TATTAA-TC-CACATTCTTTTCTAGATTAGGCACCAGAAACATAGTCTT-C-TCATAAGGATACA
1 TA-AAAGTCTC-CATTCTTTTCAAGATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACA
** ** * ** * *
187135 TGATATTGATTCTTTGGTTTCGTGGGAAACGC-TCTCTTCCCACCAATTTTT-GTAAAGT-ATAA
62 TGATATTGATGGTTTGGTTTCGCAGGAAA-GCTTTTCTTTGC-CTAATTTTTCGTAAAATCA-AA
** * * * * *
187197 GTTCATTCCTCAAATGAGACAAACATGGATTCT-A
124 GTTTGTACTTTAAATAAGACAAACATTGATTCTCA
** * * * *
187231 GTAAGGATA-T-TTTATTCATTTCATGATTAGGCACCATAAACACATTCTCC-TCGTTAGGATAA
1 -TAA--A-AGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACATT-TCCTTCATTAGGATAC
* ** * * * * * *
187293 ATGATATTGATAGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAG
61 ATGATATTGATGGTTTGGTTTCGCA-GGAAAGCTTTTCTTTGCCTAATTTTTCGTAAAATCAAAG
* * * ** *
187358 TTTGCACTTTAAATGAGATATGCATTGATTCTCG
125 TTTGTACTTTAAATAAGACAAACATTGATTCTCA
* * * * *
187392 TATAAGTCTCCTTTCTTTTCAAGATT-GGGAGCCAAAAAAACACA-TTCTCTTCATTAGGATGCA
1 TAAAAGTCTCCATTCTTTTCAAGATTAGGCA-CC--ATAAACACATTTC-CTTCATTAGGATACA
* ** * * * *
187455 TCACGTTGATGTTTTGGTGTT-GCAAGAGAAG-TTGTTCTTT-CC-ACCATTATTT-ATAGAATC
62 TGATATTGATGGTTTGGT-TTCGCAGGA-AAGCTT-TTCTTTGCCTA--ATT-TTTCGTAAAATC
* * **
187515 GAAGTTTGT-CTCTTAAATAAAACAAAC-TTGAATAGTCA
121 AAAGTTTGTACT-TTAAATAAGACAAACATTG-ATTCTCA
* * * * * *
187553 TATTAA-TC-CACATTCTTTTCTAGATTTGGCACCACAAACATAGTCTT-C-TCATAAGGATACA
1 TA-AAAGTCTC-CATTCTTTTCAAGATTAGGCACCATAAACACA-T-TTCCTTCATTAGGATACA
* ** ** * ** * * *
187614 TGACATTGATTCTTTGGTTTCGTGGGAAATGC-TCTCTTCCCACCAATTTTT-GTAAAGT-ATAT
62 TGATATTGATGGTTTGGTTTCGCAGGAAA-GCTTTTCTTTGC-CTAATTTTTCGTAAAATCA-AA
** * * * * *
187676 GTTCATTCCTCAAATGAGACAAACATGGATTCT-A
124 GTTTGTACTTTAAATAAGACAAACATTGATTCTCA
* ** * * *
187710 GT-AAGGATCTTTTATTCATTTCATGATTAGGCACCATAAACACATTCTCCTT-ATTAGGATAAA
1 -TAAAAG-TC-TCCATTCTTTTCAAGATTAGGCACCATAAACACATT-TCCTTCATTAGGATACA
* ** * * * * * *
187773 TGATATTGATAGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGT
62 TGATATTGATGGTTTGGTTTCGCA-GGAAAGCTTTTCTTTGCCTAATTTTTCGTAAAATCAAAGT
* * * *** *
187838 TTGCACTTTAAATGAGATATGTATTGATTCTCG
126 TTGTACTTTAAATAAGACAAACATTGATTCTCA
*
187871 TAAAAGTCTCCTTTCTTTTCAAGATT
1 TAAAAGTCTCCATTCTTTTCAAGATT
187897 GGGAGCCAAA
Statistics
Matches: 2591, Mismatches: 800, Indels: 553
0.66 0.20 0.14
Matches are distributed among these distances:
149 5 0.00
150 7 0.00
151 60 0.02
152 41 0.02
153 5 0.00
154 6 0.00
155 40 0.02
156 131 0.05
157 315 0.12
158 469 0.18
159 974 0.38
160 207 0.08
161 299 0.12
162 29 0.01
163 3 0.00
ACGTcount: A:0.31, C:0.17, G:0.15, T:0.37
Consensus pattern (158 bp):
TAAAAGTCTCCATTCTTTTCAAGATTAGGCACCATAAACACATTTCCTTCATTAGGATACATGAT
ATTGATGGTTTGGTTTCGCAGGAAAGCTTTTCTTTGCCTAATTTTTCGTAAAATCAAAGTTTGTA
CTTTAAATAAGACAAACATTGATTCTCA
Found at i:186019 original size:473 final size:476
Alignment explanation
Indices: 184068--187906 Score: 4987
Period size: 479 Copynumber: 8.1 Consensus size: 476
184058 TAAGTTCATG
* * *
184068 CGTAAAAGTCTCCATTCATTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACTTG
1 CGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATG
* *
184133 ACATTGATGCTTTGTTGTCGCAAGAGAGGGCTTTTCTTTCCAACGTTATCGGTAAAATCAAAATT
66 ACATTGATGCTTTGGTGTCGCAAGAGA-GGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATT
* **
184198 TGTCTCTTAAATAATACAAACTTGAATACTCATACTAATCCCATTCTTTTCGGGATTAGGCACCA
130 TGTCTCTTAAATAAAACAAACTTGAATACTCATACTAATCCCATTCTTTTCAAGATTAGGCACCA
* * * * * *
184263 TAAACATAGTCTTCTTATACGGATATAGGATATTGATGATTTAGTTTCTC-AGGAAACGCTTTTT
195 TAAACATAGTCTTCTTATAAGGATACATGATATTGATGATTTGGTTTCGCGAGGAAACGCTTTCT
** * * *
184327 TCCC-TTAATTTTTGTAAATTCTAAGTCCGTGCCTCAAATGAGACAAACATGGATCCTAGTAAGG
260 TCCCACCAATTTTTGTAAATTATAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGG
* * *
184391 ATCTTCATTCATTTCGTGATTAGACACTATAAACATATTCTCCTCATTAGGATAAATGATATTGA
325 ATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGA
* * *
184456 TAGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCATTAAAACCAAAGTTTGTACTTT
390 TGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTT
184521 AAATGAGACATGCATTGATTCT
455 AAATGAGACATGCATTGATTCT
** * *
184543 CGTAAAAGTCTCTTTTCTTTTCAAGATTGGGAACCAAAAAAACACATTCTCTTCATTAGGATGCA
1 CGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACC--AAAAACACATTCCCTTCATTAGGATACA
* * * * * * ** * * *
184608 TGACGTTGATGCTTTGGTGTCCCAAGAGAAGCTGTTCTTTCTACCGTTATTTATAGAATTAAAGT
64 TGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAAT
* * * *
184673 TTGTCTCTTAAATAAAACAAACTTGAATAGTCATATTAATCTACATTCTTTTCTAGATTAGGCAC
129 TTGTCTCTTAAATAAAACAAACTTGAATACTCATACTAATC-CCATTCTTTTCAAGATTAGGCAC
* * * * ** * *
184738 TAGAAACATAGTCTTCTAATAAGGATAAATGATATTGATTCTTTGGTTTCGTG-GGAAACGCTCT
193 CATAAACATAGTCTTCTTATAAGGATACATGATATTGATGATTTGGTTTCGCGAGGAAACGCTTT
* * * * *
184802 CTTCCCAGCAATTTTTGTAAAGTATAAGTTCATTCCTTAAATGAGACAAACATGGATTCTAGTAA
258 CTTCCCACCAATTTTTGTAAATTATAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * *
184867 GGATCTTTTATTCATTTCGTGATTAGGCACCATAAACACATTCTCCACATTAGGATAAATGATAT
323 GGATC-TTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATAT
* *
184932 TGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTTCTTAAAATCAAAGTTTGTAC
387 TGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
*
184997 TTTAAATAAGACATGCATTGATTCT
452 TTTAAATGAGACATGCATTGATTCT
* * * *
185022 CATAAAAGTCTCCGTTCTTTTCAAGATTAGGAACCAAAAACACATTTCCTTCATTAGGATACATG
1 CGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATG
* ** * *
185087 AAATTGATGCTTTGGTGTCATAGGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAGTTT
66 ACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTT
* * * * * *
185152 GTCTCTTAAATAAGACAAGCATGAATACTTATACTAATCCCCATTCTTTTCAGGATTAGGCGCCA
131 GTCTCTTAAATAAAACAAACTTGAATACTCATACTAAT-CCCATTCTTTTCAAGATTAGGCACCA
* * * * * *
185217 TAAACATAATCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCAC-AAGATACGCTTTCT
195 TAAACATAGTCTTCTTATAAGGATACATGATATTGATGATTTGGTTTCGCGAGGAAACGCTTTCT
** * * * * *
185281 TCCCACCAATTTGGGTAAATTATGAGTTCATTG-CTCAATTGAGACAAACATGGATTCTTGTAGG
260 TCCCACCAATTTTTGTAAATTATAAGTTC-GTGCCTCAAATGAGACAAACATGGATTCTAGTAAG
* *
185345 GATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTG
324 GATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTG
* *
185410 ATGGTTTTCTTTTGCATGGAAATGTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTT
389 ATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTT
185475 TAAATGAGACATGCATTGATTCT
454 TAAATGAGACATGCATTGATTCT
* * * *
185498 CGTAAACGTCTTCATTCCTTTCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATG
1 CGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATG
* * *
185563 ACTTTGATACTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATTAAAATTT
66 ACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTT
* * * * *
185628 GTCTCTTAAATAAGATAAACTTGAATACTCGTACTAATCCCATTCTTTTAAAGATTAGGCACCCT
131 GTCTCTTAAATAAAACAAACTTGAATACTCATACTAATCCCATTCTTTTCAAGATTAGGCACCAT
* * *
185693 AAACATAGTCTTCTTATATGGATACAGGATATTGATGATTTGGTTTCGCGAGG-AACGCTTTTTT
196 AAACATAGTCTTCTTATAAGGATACATGATATTGATGATTTGGTTTCGCGAGGAAACGCTTTCTT
* * * *
185757 CCCA-CAATTTTTGTAAATTCTAAATTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGA
261 CCCACCAATTTTTGTAAATTATAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA
* *
185821 CCTTCGTTCATTTCATGATTAGGCACTATAAACACATTCTCGC-CATTAGGATAAATGATATTGA
326 TCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTC-CTCATTAGGATAAATGATATTGA
* *
185885 TGGTTTTCTTTTTC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTT
390 TGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTT
* *
185949 ATATGAGATATGCATTGATTCT
455 AAATGAGACATGCATTGATTCT
* * * *
185971 CGTAAAAGTCTCCATTCCTTTCAAGAATGGGAACCAAAAACACATTCCCTTTATTGGGATACATG
1 CGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATG
186036 ACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCC-A----A-CG-TAAAATCAAAATTT
66 ACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTT
* * * * * *
186094 ATCTCTTAAATAAGATAAACTTGAATACTCATACTAATCCCTTTTTTTTCAGGATTAGGCACCAT
131 GTCTCTTAAATAAAACAAACTTGAATACTCATACTAATCCCATTCTTTTCAAGATTAGGCACCAT
* * * * *
186159 AAACATAGTCTTCTTATACGGATACAAGATATTGATGATTTGGTTTCGC-AAGAAACTCTTTTTT
196 AAACATAGTCTTCTTATAAGGATACATGATATTGATGATTTGGTTTCGCGAGGAAACGCTTTCTT
* * * *
186223 CCCA-CAAGTTTTGTAAATTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGA
261 CCCACCAATTTTTGTAAATTATAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA
* * *
186287 TCTTCGTTCATTTCATGATTAGGCACTATAATCACATTCTCCTCATTAGGATAAATGATAATGAT
326 TCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAT
* * *
186352 GGTTTTCTTTTACTTGAAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTA
391 GGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTA
* * *
186417 AATGAAACATGCTTTGATTGT
456 AATGAGACATGCATTGATTCT
* * * *
186438 CGTAAAAGTCTTCATTCTTTTCAAGATTCGGAACCAAAAACACAATCCCTGCATTAGGATACATG
1 CGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATG
* * * * *
186503 ACATTCATGCTTTGGTGTGGCAAGAAAGGTTTTTCTTTCCAACGTTATCGGTAAAATCAAAATTT
66 ACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTT
* * ** *
186568 ATCTCTTAAATAAAACAAACTTCAATACTCATACTAATCCTGTTCTTTT-AGGATTAGGCACCAT
131 GTCTCTTAAATAAAACAAACTTGAATACTCATACTAATCCCATTCTTTTCAAGATTAGGCACCAT
* * * ** * * * * *
186632 AAACAAAGTCTTCTTTTACGGATGTAGGATATTGATGATTTGGTTTCAC-AAGAAATGCTTTTTT
196 AAACATAGTCTTCTTATAAGGATACATGATATTGATGATTTGGTTTCGCGAGGAAACGCTTTCTT
* * * *
186696 CCCA-CAATTTTTGTAAATTCTAAGTTCGTACCTCAAATTAGACAAACATGGATTCTAGTAAAGA
261 CCCACCAATTTTTGTAAATTATAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA
*
186760 TCTTCATTCATTTTGA-GATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGAT-TATG
326 TCTTCATTCA-TTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATAT-TG
* * * * *
186823 ATGGTTTTCTTTTACTTGAAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTGTGCACTT
389 ATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTT
*
186888 TAAATGAGATATGCATTGATTCT
454 TAAATGAGACATGCATTGATTCT
* * *
186911 CGTAAAAGTCTCCTTTCTTTTCAAGATTGGGAACCAACAAAACACATTCTCTTCATTAGGATGCA
1 CGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-A-AAAACACATTCCCTTCATTAGGATACA
** * * * ** * *
186976 TGAGGTTGATGCTTTGGTGTCGCAAGAGAAGCTATTT-TTTCCACCATTATTTATAGAATCAAAG
64 TGACATTGATGCTTTGGTGTCGCAAGAGAGGCT-TTTCTTTCCAACGTTATCGATAAAATCAAAA
* * * *
187040 TTTGTCTCTTAAATAAAACAAACCTGAATAGTCATATTAATCCACATTCTTTTCTAGATTAGGCA
128 TTTGTCTCTTAAATAAAACAAACTTGAATACTCATACTAATCC-CATTCTTTTCAAGATTAGGCA
* * ** * *
187105 CCAGAAACATAGTCTTCTCATAAGGATACATGATATTGATTCTTTGGTTTCGTG-GGAAACGCTC
192 CCATAAACATAGTCTTCTTATAAGGATACATGATATTGATGATTTGGTTTCGCGAGGAAACGCTT
* * *
187169 TCTTCCCACCAATTTTTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
257 TCTTCCCACCAATTTTTGTAAATTATAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
* * * *
187234 AGGATATTTTATTCATTTCATGATTAGGCACCATAAACACATTCTCCTCGTTAGGATAAATGATA
322 AGGAT-CTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
* *
187299 TTGATAGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGCA
386 TTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
*
187364 CTTTAAATGAGATATGCATTGATTCT
451 CTTTAAATGAGACATGCATTGATTCT
* * * * *
187390 CGTATAAGTCTCCTTTCTTTTCAAGATTGGGAGCCAAAAAAACACATTCTCTTCATTAGGATGCA
1 CGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACC--AAAAACACATTCCCTTCATTAGGATACA
* * * * * * * ** * * *
187455 TCACGTTGATGTTTTGGTGTTGCAAGAGAAG-TTGTTCTTTCCACCATTATTTATAGAATCGAAG
64 TGACATTGATGCTTTGGTGTCGCAAGAGAGGCTT-TTCTTTCCAACGTTATCGATAAAATCAAAA
* * * *
187519 TTTGTCTCTTAAATAAAACAAACTTGAATAGTCATATTAATCCACATTCTTTTCTAGATTTGGCA
128 TTTGTCTCTTAAATAAAACAAACTTGAATACTCATACTAATCC-CATTCTTTTCAAGATTAGGCA
* * * ** * * *
187584 CCACAAACATAGTCTTCTCATAAGGATACATGACATTGATTCTTTGGTTTCGTG-GGAAATGCTC
192 CCATAAACATAGTCTTCTTATAAGGATACATGATATTGATGATTTGGTTTCGCGAGGAAACGCTT
* * * *
187648 TCTTCCCACCAATTTTTGTAAAGTATATGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
257 TCTTCCCACCAATTTTTGTAAATTATAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
* * *
187713 AGGATCTTTTATTCATTTCATGATTAGGCACCATAAACACATTCTCCTTATTAGGATAAATGATA
322 AGGATC-TTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
* *
187778 TTGATAGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGCA
386 TTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* *
187843 CTTTAAATGAGATATGTATTGATTCT
451 CTTTAAATGAGACATGCATTGATTCT
* *
187869 CGTAAAAGTCTCCTTTCTTTTCAAGATTGGGAGCCAAA
1 CGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA
187907 GAAAACACAT
Statistics
Matches: 3004, Mismatches: 322, Indels: 74
0.88 0.09 0.02
Matches are distributed among these distances:
465 3 0.00
466 262 0.09
467 160 0.05
468 2 0.00
472 2 0.00
473 470 0.16
474 179 0.06
475 219 0.07
476 365 0.12
477 433 0.14
478 118 0.04
479 788 0.26
480 3 0.00
ACGTcount: A:0.31, C:0.17, G:0.15, T:0.37
Consensus pattern (476 bp):
CGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATG
ACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTT
GTCTCTTAAATAAAACAAACTTGAATACTCATACTAATCCCATTCTTTTCAAGATTAGGCACCAT
AAACATAGTCTTCTTATAAGGATACATGATATTGATGATTTGGTTTCGCGAGGAAACGCTTTCTT
CCCACCAATTTTTGTAAATTATAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA
TCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAT
GGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTA
AATGAGACATGCATTGATTCT
Found at i:188335 original size:13 final size:13
Alignment explanation
Indices: 188317--188342 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
188307 TACACAAAGT
188317 ATGTATCGATACA
1 ATGTATCGATACA
188330 ATGTATCGATACA
1 ATGTATCGATACA
188343 CAAAAAAATT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:188361 original size:34 final size:32
Alignment explanation
Indices: 188299--188363 Score: 94
Period size: 32 Copynumber: 2.0 Consensus size: 32
188289 TAGCCAAACT
**
188299 TGTATCGATACACAAAGTATGTATCGATACAA
1 TGTATCGATACACAAAAAATGTATCGATACAA
188331 TGTATCGATACACAAAAAAATTGTATCGATACA
1 TGTATCGATACAC-AAAAAA-TGTATCGATACA
188364 TTGGCTTGTA
Statistics
Matches: 29, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
32 13 0.45
33 4 0.14
34 12 0.41
ACGTcount: A:0.43, C:0.15, G:0.14, T:0.28
Consensus pattern (32 bp):
TGTATCGATACACAAAAAATGTATCGATACAA
Found at i:194400 original size:20 final size:20
Alignment explanation
Indices: 194329--194406 Score: 68
Period size: 20 Copynumber: 3.6 Consensus size: 20
194319 AATGTCAAAA
194329 ATGTATCGATACATGTTTT-T
1 ATGTATCGATACAT-TTTTCT
* *
194349 GTGTATCGATACATTTGGAAATTCA
1 ATGTATCGATACATTT-----TTCT
194374 ATGTATCGATACATTTTTCT
1 ATGTATCGATACATTTTTCT
*
194394 TTGTATCGATACA
1 ATGTATCGATACA
194407 GGGGGATTAT
Statistics
Matches: 47, Mismatches: 5, Indels: 12
0.73 0.08 0.19
Matches are distributed among these distances:
19 2 0.04
20 28 0.60
24 2 0.04
25 15 0.32
ACGTcount: A:0.28, C:0.13, G:0.15, T:0.44
Consensus pattern (20 bp):
ATGTATCGATACATTTTTCT
Found at i:194561 original size:20 final size:19
Alignment explanation
Indices: 194513--194563 Score: 59
Period size: 21 Copynumber: 2.6 Consensus size: 19
194503 TTTTCAAATC
194513 TTTCA-CAAAATACTTGTT
1 TTTCATCAAAATACTTGTT
*
194531 TTTCACTTCAAATTACTTCGTT
1 TTTCA--TCAAAATACTT-GTT
194553 TTTCATCAAAA
1 TTTCATCAAAA
194564 CCAGCATCAA
Statistics
Matches: 27, Mismatches: 2, Indels: 6
0.77 0.06 0.17
Matches are distributed among these distances:
18 5 0.19
20 5 0.19
21 9 0.33
22 8 0.30
ACGTcount: A:0.31, C:0.20, G:0.04, T:0.45
Consensus pattern (19 bp):
TTTCATCAAAATACTTGTT
Found at i:196191 original size:20 final size:21
Alignment explanation
Indices: 196168--196224 Score: 71
Period size: 21 Copynumber: 2.8 Consensus size: 21
196158 ACAATTCAAA
**
196168 GTATCGATACATGTTGCA-AT
1 GTATCGATACATGTTAAAGAT
**
196188 GTATCGATACATGAAAAAGAT
1 GTATCGATACATGTTAAAGAT
196209 GTATCGATACATGTTA
1 GTATCGATACATGTTA
196225 TTGGGATTTC
Statistics
Matches: 30, Mismatches: 6, Indels: 1
0.81 0.16 0.03
Matches are distributed among these distances:
20 14 0.47
21 16 0.53
ACGTcount: A:0.37, C:0.12, G:0.19, T:0.32
Consensus pattern (21 bp):
GTATCGATACATGTTAAAGAT
Found at i:196288 original size:13 final size:13
Alignment explanation
Indices: 196270--196295 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
196260 TACACAAAGT
196270 ATGTATCGATACA
1 ATGTATCGATACA
196283 ATGTATCGATACA
1 ATGTATCGATACA
196296 CAAAAAAATT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:196314 original size:34 final size:32
Alignment explanation
Indices: 196252--196316 Score: 94
Period size: 32 Copynumber: 2.0 Consensus size: 32
196242 TAGCCAAACT
**
196252 TGTATCGATACACAAAGTATGTATCGATACAA
1 TGTATCGATACACAAAAAATGTATCGATACAA
196284 TGTATCGATACACAAAAAAATTGTATCGATACA
1 TGTATCGATACAC-AAAAAA-TGTATCGATACA
196317 TTGGCTTGTA
Statistics
Matches: 29, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
32 13 0.45
33 4 0.14
34 12 0.41
ACGTcount: A:0.43, C:0.15, G:0.14, T:0.28
Consensus pattern (32 bp):
TGTATCGATACACAAAAAATGTATCGATACAA
Found at i:200089 original size:475 final size:475
Alignment explanation
Indices: 198857--203122 Score: 5589
Period size: 475 Copynumber: 9.0 Consensus size: 475
198847 TAAAATAAGG
* * * * *
198857 CAAACATGGATTCTAGTAAGGGTCTTCATTCATTTTGTGATTAAGTACTATAAGCACATTCTCCT
1 CAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
*
198922 CAGTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
66 CATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
*
198987 TAAAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
131 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
*
199052 AAGATTGAGAACCAAAAACACATTCCCTT-ATTAGGATACATGACATTGATGCTTTGGTGTCGCA
196 AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* ** * *
199116 AAAGAGGCTTTTCTTTCCCCCATTTTCGATAAAATCAAAATTTGTCTCTTAAATAAGATAAACAT
261 AGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAAATAAGAT-AACAT
* *
199181 GAATACTCATACTAATCCCCATTTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAGGG
325 GAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGG
* ** * * *
199246 ATACATGATATTGGTGCTTTGAATTCACAAGATACGCTTTCTTCCAACCAATTTGTGTAAAGTAT
390 ATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTAT
*
199311 GAGTTCATTGCTCAAATGAGA
455 AAGTTCATTGCTCAAATGAGA
* * * *
199332 CAAACATGGATTCTTGTAGGGATTTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTGCT
1 CAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
*
199397 CTTTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAAAATCTTTTCTTTGCCTTATTTTC
66 CATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGG--AAATCTTTTCTTTGCCTTATTTTC
*
199462 CTTAAAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTT
129 CTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTT
*
199527 TCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTGATGCTTTGGTGTCG
194 TCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
* * *
199592 CAAAAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTTTTAAATAAGACTTAC
259 CAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAAATAAGA-TAAC
*
199657 ATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAAAATAGTCTTCTCATAA
323 ATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAA
* * * * *
199722 GGATGCATGATATTGATGCTTTGGATTCACAAGATACGCTTTCTTCCAACCAA-TTGTGTAAAGT
388 GGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGT
*
199786 ATGAGTTCATTGCTCAAATGAGA
453 ATAAGTTCATTGCTCAAATGAGA
* * *
199809 CAAACATGGATTCTTGCAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTGCT
1 CAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
* * *
199874 CTTTAGGATAATTGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTTCT
66 CATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
* * * *
199939 TAAAATCAAAGTTTGAACTTTAAATGAGACAGGCATTGATTCTCATAAAAGTCTCCGTTCTTTTC
131 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* * *
200004 AAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTTATGCTTTGGTGTTGCA
196 AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* * * * * *
200069 GGAGAGGCTTTTCTTTCCAACGTTATCGGTATAATCAAAGTTTGTCTCTTAAATAAGACAGGCAT
261 AGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAAATAAGATA-ACAT
* *
200134 GAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCGCCATAAACATAATCTTCTCATAAGG
325 GAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGG
* * ** *
200199 ATACATGATATTGATGCTTTGGTTTCACAAGATACGCTTTCATCCCACCAATTTGGGTAAATTAT
390 ATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTAT
* *
200264 GAGTTCATTGCTCAATTGAGA
455 AAGTTCATTGCTCAAATGAGA
* * *
200285 CAAACATGGATTCTTGTAGGGATCTTCATTCTTTTCGTGATTAGGCACTATAAACACATTCTCCT
1 CAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
* * *
200350 CTTTAGGATAAATGATATTAATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTTCT
66 CATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
* * *
200415 TAAAATCAAAGTTTGTACTTTCAATGGGACATGCATTGATTCTCGTAAAAGTCTTCATTCTTTTC
131 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
*
200480 AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACA-GACATTGATGCTTTGGTGTCGTA
196 AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* * *
200544 AGAGAGGCTTTTCCTTCCAACGTTATCGATAAAATTAAAATTTGTCTCTTAAATAAGATAAACTT
261 AGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAAATAAGAT-AACAT
* * * *
200609 GAATACTCATACTAAT-CCCATTCTTTTCACGATTAGGCACCCTAAACATAGTCTTCTTATATGG
325 GAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGG
* * * * * * * * * * *
200673 ATACAGGATACTGATGATTTGGTTTCGCGAGAAACGTTTTTTTCTCA-CAATTTTTGTTAATTCT
390 ATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTAT
*
200737 AAGTT--TGTGCCTCAAATAAGA
455 AAGTTCAT-TG-CTCAAATGAGA
* * *
200758 CAAACATGGATTCTAGTAAAGATCTTCGTTCATTTCATGATTAGGCACTATAAACACATTCTCCT
1 CAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
* *
200823 TATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCT
66 CATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
* * *
200888 TAAAATCAAAGTTTATACTTTAAATGAGACATGCATTGATTCTCGCAATAGTCTCCATTCTTTTC
131 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* * * * * * * * *
200953 AAGATTAGGAGCCAAAAATAGAATCCCTGCTTTAGGATACATGGCATTGATACTTTGGTGTCGCA
196 AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
*
201018 AGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAAATAAGATAAACTT
261 AGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAAATAAGAT-AACAT
** * * *
201083 GAATACTCGGACTAAT-CCCATTCTTTTCAGGATTAGGCACCCTAAACATAGTCTTCTTATACGG
325 GAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGG
* * * * * *
201147 ATATA-GAATATTGATGATTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTC
390 ATACATG-ATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTA
*
201211 TAAGTTC-CTGCTTCAAATGAGA
454 TAAGTTCATTGC-TCAAATGAGA
* * *
201233 CAAACAAGGATTCTAGAAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCTT
1 CAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
* * *
201298 CATTAAGATAAATGATGTTGATGGTTTTCTTTTGCATGGAAATCTTTTCCTTGCCTTATTTTCCT
66 CATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
* * ** * * *
201363 TAAAATTAAAGTTTGTACTTTAAATGAGACATGCTTTGATTCTTATAAAAGTTTCC-TAACTTTC
131 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCAT-TCTTTT
* * ***
201427 CAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGGCATTGATGCTTTTGTGTTTT
195 CAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
* * *
201492 AAGAGAAGCTTTTCTTTCCACCGTTAAT-GATAAAATCAAAATTTGTCCCTTAAATAATGGA-AA
260 AAGAGAGGCTTTTCTTTCCAACGTT-ATCGATAAAATCAAAATTTGTCTCTTAAATAA--GATAA
* ** *
201555 CATGAATACTCATACTAATCCCTATTCTTTTTGGGATTAGGCACCCTAAACATAGTCTTCTCATA
322 CATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATA
* * * * * * *
201620 TGGATACAAGATATTGATGATTTAGTTTCACAAGAAACACTTTTTTCCCACCAATTTTTGTAAAT
387 AGGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAG
* *
201685 TCTAAGTTC-GTGCCTCAAATGAGA
452 TATAAGTTCATTG-CTCAAATGAGA
*
201709 CAAACATGGATTCTAGTAAGTATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
1 CAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
* * *
201774 CATTAGGATAAGTGATAGTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCT
66 CATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
* * * *
201839 TAAAATCAAAGTCTGCACTTTAAATGAGATATGCATTGATTCTCGT-AAAGTCTCCTTTCTTTTC
131 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* * * *
201903 AAGATTGGGAACCAAAAAAACACATTCTCTTCATTAGGATGCATAACGTTGATGCTTTGGTGTCG
196 AAGATTGGGAACC--AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
* * * * * ** * * * *
201968 CAAAAGAAGCTGTTCTTTCCACCATTATTTATAGAATCAAAGTTTGTCTCTTAAATAAAACAAAC
259 CAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAAATAAGA-TAAC
* * * * * *
202033 TTGAATAGTCATATTAATCCACATTCTTTTCTA-GATTAGGCACCAGAAACATAGTCTTCCCATA
323 ATGAATACTCATACTAATCCCCATTCTTTTC-AGGATTAGGCACCATAAACATAGTCTTCTCATA
* **** *
202097 AGGATACATGATATTGATTCTTTGGTTTCGTGGGAAACGCTCTCTTCCCACCAATTTTTGTAAAG
387 AGGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAG
* *
202162 TATAAGTTCATTCCTCAACTGAGA
452 TATAAGTTCATTGCTCAAATGAGA
* * * *
202186 CAAACATGGATTGTAATAAGGATCTTTTATTCATTTCGTGATTAGGCACCATAAACACATTCTCC
1 CAAACATGGATTCTAGTAAGGATC-TTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC
* *
202251 TCATTAGAATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCC
65 TCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCC
* * *
202316 TTAAAATCAAAGTTTGCACTTTAAATGAGATATGCATTGATTCTCGTAAAAGTCTCCTTTCTTTT
130 TTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT
* ** * *
202381 CAAGATTGGGAACCAAAAAAACACATTCTCTTCATTAGGATGTATGACGTTGATGCTTTGGTGTT
195 CAAGATTGGGAACC--AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * ** * * * *
202446 GCAAGAGAAGCTGTTCTTTTCACAA--TTATTTATAGAATCAAAGTTTGTCTCTTAAATAAAACA
258 GCAAGAGAGGCTTTTC-TTTC-CAACGTTATCGATAAAATCAAAATTTGTCTCTTAAATAAGA-T
* * * * * * * *
202509 AACTTGAATAGTCATATTAATCCACATTCTTTTCTA-GTTTAAGCACCAGAAACATAGTCTTCTT
320 AACATGAATACTCATACTAATCCCCATTCTTTTC-AGGATTAGGCACCATAAACATAGTCTTCTC
* **** * * *
202573 ATAAGGATACATGATATTGATTCTTTGGTTTCGTGGGAGACGCTCTCTTCCCACTAATTTTTGTA
384 ATAAGGATACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGTA
* *
202638 AAGTATAAGTCCATTCCTCAAATGAGA
449 AAGTATAAGTTCATTGCTCAAATGAGA
* *
202665 CAAACATGGATTCTAGTAAGGATCTAT-ATTCATTTCATGATTAGGCACCATAAACACATTCTCC
1 CAAACATGGATTCTAGTAAGGATCT-TCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC
* * * * * * * * *
202729 CCATTGGGATAAACGATATTGATTGTTTTCTTTTACTTGGAAATCTTTTATTTGCCTCACTTTCC
65 TCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCC
* * *
202794 TTAAAATCAAAGTTTGTACTTTAAATTAGACAAGCATTGATTCTCGTAAAAGTTTCCATT-TTTT
130 TTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT
* * *
202858 CCAAGATTGGGAACCAAAAACACTTTCTCTTCGTTAGGATACATGACATTGATGCTTTGGTGT--
195 -CAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
* * * *
202921 CATA-AGAGGCTTTTCTTTCCACCGTTGAT-GATAAAATCAAAGTCTATCTCTTAAATAAGATAA
259 CA-AGAGAGGCTTTTCTTTCCAACGTT-ATCGATAAAATCAAAATTTGTCTCTTAAATAAGAT-A
* * * * *
202984 ACATGAATACTCACT-CTAATACCGATTCCTTTCATGATTAGGCGCCATAAACATAGTCTTCTCA
321 ACATGAATACTCA-TACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCA
* * * * * * *
203048 TAAAGATACAGGATATTGATGATTTGGTCT-AGCAAGAAATGGTTTTTTCCCACCAATTTTTGTA
385 TAAGGATACATGATATTGATGCTTTGGTTTCA-CAAGAAACGCTTTCTTCCCACCAATTTTTGTA
* *
203112 AATTCTAAGTT
449 AAGTATAAGTT
203123 TGTGCCTTAA
Statistics
Matches: 3400, Mismatches: 348, Indels: 87
0.89 0.09 0.02
Matches are distributed among these distances:
471 1 0.00
472 4 0.00
473 244 0.07
474 406 0.12
475 849 0.25
476 581 0.17
477 497 0.15
478 508 0.15
479 304 0.09
480 4 0.00
481 2 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (475 bp):
CAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
CATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCT
TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
AGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAAATAAGATAACATG
AATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGA
TACATGATATTGATGCTTTGGTTTCACAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATA
AGTTCATTGCTCAAATGAGA
Found at i:200159 original size:159 final size:156
Alignment explanation
Indices: 199041--201123 Score: 588
Period size: 159 Copynumber: 13.2 Consensus size: 156
199031 GTAAAAGTCT
* * * *
199041 CCATTCTTTTCAAGATT-GAGAACCAAAAACACATTCCCTTATTAGGATACATGACATTGATGCT
1 CCATTCTTTTCAAGATTAG-GCACCAAAAACACATT-TCTCATTAGGATACATGATATTGATGCT
* ** * * * *
199105 TTGGTGTCGCAAAAGAGGCTTTTCTTTCCCCCATTTTCGATAAAATCAAAATTTGTCTCTTAAAT
64 TTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGGTAAAATCAAAGTTTGTCTCTTAAAT
* *
199170 AAGATAAACATGAATACTCATACTAATCC
129 AAGACAGACATGAATACTCATA-TAATCC
* * * * *
199199 CCATTTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCA-TAGGGATACATGATATTGGTGC
1 CCATTCTTTTCAAGATTAGGCACCAAAAACACA-T-TTCTCATTA-GGATACATGATATTGATGC
* * * * * * * **
199263 TTTGAAT-TCACAAGATACGC-TTTC-TTCCAACCAATT-T-GTGTAAAGT-ATGAGTTCAT-TG
63 TTTG-GTGTCGCAAGAGAGGCTTTTCTTTCCAA-C-GTTATCG-GTAAAATCA-AAGTTTGTCT-
* * * * * ** ** **
199321 CTCAAATGAGACAAACATGGATTCTTGTAGGGATTT
122 CTTAAATAAGACAGACATGAATACTCATA-TAATCC
* * ** * * * * *
199357 TCATTCATTTCGTGATTAGGCACTATAAACACATTCTGCTCTTTAGGATAAATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCAAAAACACATT-T-CTCATTAGGATACATGATATTGATGCT
** * * * * ** * * **
199422 TTTCTTTTGCATGGAAAAATCTTTTCTTTGCCTTA--TTTTCCTTAAAATCAAAGTTTGTACT-T
64 TTGGTGTCGCA-AG-AGAGGCTTTTCTTT-CC-AACGTTATCGGTAAAATCAAAGTTTGT-CTCT
* * * * * *
199484 TATATGAGACATG-CATTG-ATTCTCGTAAAAGTCT
124 TAAATAAGACA-GACA-TGAATACTCATATAA-TCC
* * * * *
199518 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTGATGCT
1 CCATTCTTTTCAAGATTAGGCACCAAAAACACATT-TC-TCATTAGGATACATGATATTGATGCT
* * * *
199583 TTGGTGTCGCAAAAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTTTTAAAT
64 TTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGGTAAAATCAAAGTTTGTCTCTTAAAT
**
199648 AAGACTTACATGAATACTCATACTAATCC
129 AAGACAGACATGAATACTCATA-TAATCC
* * * *
199677 CCATTCTTTTCAGGATTAGGCACCATAAAA-ATAGTCTTCTCATAAGGATGCATGATATTGATGC
1 CCATTCTTTTCAAGATTAGGCACCA-AAAACACA-T-TTCTCATTAGGATACATGATATTGATGC
* * * ** * * * **
199741 TTTGGAT-TCACAAGATACGC-TTTC-TTCCAAC-CAATTGTGTAAAGT-ATGAGTTCAT-TGCT
63 TTTGG-TGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCG-GTAAAATCA-AAGTTTGTCT-CT
* * * * * ** *
199800 CAAATGAGACAAACATGGATTCTTGCA-AGGATCT
124 TAAATAAGACAGACATGAATAC-T-CATATAATCC
* * ** * * * *
199834 TCATTCATTTCGTGATTAGGCACTATAAACACATTCTGCTCTTTAGGATA-ATTGATATTGATGG
1 CCATTCTTTTCAAGATTAGGCACCAAAAACACATT-T-CTCATTAGGATACA-TGATATTGATGC
** * * * ** * * * * *
199898 TTTTCTTTTGCATG-GAAATCTTTTCTTTGCCTTA-TTTTTC-TTAAAATCAAAGTTTGAACT-T
63 TTTGGTGTCGCAAGAG-AGGCTTTTCTTT-CC-AACGTTATCGGTAAAATCAAAGTTTG-TCTCT
* * * * *
199959 TAAATGAGACAGGCATTG-ATTCTCATAAAAGTCT
124 TAAATAAGACAGACA-TGAATACTCATATAA-TCC
* * * * *
199993 CCGTTCTTTTCAAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTTATGCT
1 CCATTCTTTTCAAGATTAGGCACCAAAAACACATTT-C-TCATTAGGATACATGATATTGATGCT
* * *
200058 TTGGTGTTGCAGGAGAGGCTTTTCTTTCCAACGTTATCGGTATAATCAAAGTTTGTCTCTTAAAT
64 TTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGGTAAAATCAAAGTTTGTCTCTTAAAT
*
200123 AAGACAGGCATGAATACTCATACTAATCC
129 AAGACAGACATGAATACTCATA-TAATCC
* * * * *
200152 CCATTCTTTTCAGGATTAGGCGCCATAAACATAATCTTCTCATAAGGATACATGATATTGATGCT
1 CCATTCTTTTCAAGATTAGGCACCAAAAACA-CAT-TTCTCATTAGGATACATGATATTGATGCT
* * * * * * * * * * * ** *
200217 TTGGTTTCACAAGATACGC-TTTCATCCCACCAATT-TGGGT-AAATTATGAGTTCAT-TGCTCA
64 TTGGTGTCGCAAGAGAGGCTTTTCTTTCCAAC-GTTATCGGTAAAATCA-AAGTTTGTCT-CTTA
* * * * * ** ** *
200278 ATTGAGACAAACATGGATTCTTGTAGGGATCT
126 AATAAGACAGACATGAATACTCATA-TAATCC
* ** * * * * * *
200310 TCATTCTTTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTAATGGT
1 CCATTCTTTTCAAGATTAGGCACCAAAAACACATT-T-CTCATTAGGATACATGATATTGATGCT
** * * * ** * * * *
200375 TTTCTTTTGCATG-GAAATCTTTTCTTTGCCTTA-TTTTTC-TTAAAATCAAAGTTTGTACT-TT
64 TTGGTGTCGCAAGAG-AGGCTTTTCTTT-CC-AACGTTATCGGTAAAATCAAAGTTTGT-CTCTT
* ** * * * *
200436 CAATGGGACATG-CATTG-ATTCTCGTAAAAGTCT
125 AAATAAGACA-GACA-TGAATACTCATATAA-TCC
* * * * *
200469 TCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACA-GACATTGATGCT
1 CCATTCTTTTCAAGATTAGGCACCAAAAACACATT-TC-TCATTAGGATACATGATATTGATGCT
* * * * *
200533 TTGGTGTCGTAAGAGAGGCTTTTCCTTCCAACGTTATCGATAAAATTAAAATTTGTCTCTTAAAT
64 TTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGGTAAAATCAAAGTTTGTCTCTTAAAT
* * *
200598 AAGATAAACTTGAATACTCATACTAAT-C
129 AAGACAGACATGAATACTCATA-TAATCC
* ** * * * * *
200626 CCATTCTTTTCACGATTAGGCACCCTAAACATAGTCTTCTTA-TATGGATACAGGATACTGATGA
1 CCATTCTTTTCAAGATTAGGCACCAAAAACACA-T-TTCTCATTA-GGATACATGATATTGATGC
* * * * * ** * * * *
200690 TTTGGTTTCGCGAGAAACG-TTTT-TTTCTC-ACAATT-TTTGTTAATTCTAAGTTTGTGC-CTC
63 TTTGGTGTCGCAAGAGAGGCTTTTCTTTC-CAAC-GTTATCGGTAAAATCAAAGTTTGT-CTCTT
* * * * *
200750 AAATAAGACAAACATGGATTCT-AGTAAAGATCT
125 AAATAAGACAGACATGAATACTCA-TATA-ATCC
* * * * * * * * *
200783 TCGTTCATTTCATGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGGT
1 CCATTCTTTTCAAGATTAGGCACCAAAAACACATT-T-CTCATTAGGATACATGATATTGATGCT
** * * ** ** * * ** *
200848 TTTCTTTTGCTTG-GAAATCTTTTCTTTGCCTTA--TTTTCCTTAAAATCAAAGTTTATACT-TT
64 TTGGTGTCGCAAGAG-AGGCTTTTCTTT-CC-AACGTTATCGGTAAAATCAAAGTTTGT-CTCTT
* * * *
200909 AAATGAGACATG-CATTG-ATTCTCGCA-ATAGTCT
125 AAATAAGACA-GACA-TGAATACT--CATATAATCC
* * ** * ** *
200942 CCATTCTTTTCAAGATTAGG-AGCCAAAAATAGAATCCCTGCTTTAGGATACATGGCATTGATAC
1 CCATTCTTTTCAAGATTAGGCA-CCAAAAACA-CATTTCT-CATTAGGATACATGATATTGATGC
* *
201006 TTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAAA
63 TTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGGTAAAATCAAAGTTTGTCTCTTAAA
* * * **
201071 TAAGATAAACTTGAATACTCGGACTAAT-C
128 TAAGACAGACATGAATACTCATA-TAATCC
*
201100 CCATTCTTTTCAGGATTAGGCACC
1 CCATTCTTTTCAAGATTAGGCACC
201124 CTAAACATAG
Statistics
Matches: 1372, Mismatches: 420, Indels: 266
0.67 0.20 0.13
Matches are distributed among these distances:
155 4 0.00
156 60 0.04
157 219 0.16
158 369 0.27
159 561 0.41
160 48 0.03
161 101 0.07
162 6 0.00
163 3 0.00
164 1 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (156 bp):
CCATTCTTTTCAAGATTAGGCACCAAAAACACATTTCTCATTAGGATACATGATATTGATGCTTT
GGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGGTAAAATCAAAGTTTGTCTCTTAAATAA
GACAGACATGAATACTCATATAATCC
Found at i:202541 original size:161 final size:160
Alignment explanation
Indices: 201895--202601 Score: 372
Period size: 159 Copynumber: 4.4 Consensus size: 160
201885 AAAGTCTCCT
* * * *
201895 TTCTTTTCAAGATTGGGAACCAAAAAAACACATTCTCTTCATTAGGATGCATAACGTTGATGCTT
1 TTCTTTTCAAGATTAGGAACC--AAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTT
* * *
201960 TGGTGTCGCAAAAGAAGCTGTTCTTTCCACCATTATTTATAGAATCAAAGTTTGTCTCTTAAATA
64 TGGTGTTGCAAGAGAAGCTGTTCTTTCCACAATTATTTATAGAATCAAAGTTTGTCTCTTAAATA
202025 AAACAAACTTGAATAGTCATATTAATC-CACA
129 AAACAAACTTGAATAGTCATATTAATCTCACA
* * * * * * * * *
202056 TTCTTTTCTAGATTAGGCACCAGAAACATAGTCT-TCCCATAAGGATACATGATATTGATTCTTT
1 TTCTTTTCAAGATTAGGAACCAAAAACACATTCTCT-TCATTAGGATACATGACATTGATGCTTT
** * * * *
202120 GGT-TT-CGTGGGAAACGCT-CTCTTCCCACCAATT-TTTGTA-AAGT-ATAAGTTCAT-TC-CT
65 GGTGTTGCAAGAG-AA-GCTGTTCTTTCCA-CAATTATTTATAGAA-TCA-AAGTT--TGTCTCT
* * * * * * * * *** ***
202177 CAACTGAGACAAACATGGATTGTAATAAGGATCTTTTA
123 TAAATAAAACAAACTTGAATAGTCATATTAATCTCACA
* ** * * * * * * * *
202215 TTCATTTCGTGATTAGGCACCATAAACACATTCTCCTCATTAGAATAAATGATATTGATGGTTTT
1 TTCTTTTCAAGATTAGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTG
* * * * * * * * * *
202280 CTTTTGCATGAAAATCTTTTCTTTGC-C--TTATTTTCCTTAAAATCAAAGTTTG-CACTTTAAA
66 GTGTTGCAAGAGAAGCTGTTCTTTCCACAATTA-TTT--ATAGAATCAAAGTTTGTCTC-TTAAA
* * * ** ** * * *
202341 TGAGATATGCATTG-ATTCTCGTA-AAAGTCTC-CT
127 TAAAACAAAC-TTGAATAGTCATATTAA-TCTCACA
* ** *
202374 TTCTTTTCAAGATTGGGAACCAAAAAAACACATTCTCTTCATTAGGATGTATGACGTTGATGCTT
1 TTCTTTTCAAGATTAGGAACC--AAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTT
*
202439 TGGTGTTGCAAGAGAAGCTGTTCTTTTCACAATTATTTATAGAATCAAAGTTTGTCTCTTAAATA
64 TGGTGTTGCAAGAGAAGCTGTTCTTTCCACAATTATTTATAGAATCAAAGTTTGTCTCTTAAATA
202504 AAACAAACTTGAATAGTCATATTAATC-CACA
129 AAACAAACTTGAATAGTCATATTAATCTCACA
* * * * * * * * * *
202535 TTCTTTTCTAGTTTAAGCACCAGAAACATAGTCTTCTT-ATAAGGATACATGATATTGATTCTTT
1 TTCTTTTCAAGATTAGGAACCAAAAACACATTC-TCTTCATTAGGATACATGACATTGATGCTTT
202599 GGT
65 GGT
202602 TTCGTGGGAG
Statistics
Matches: 391, Mismatches: 121, Indels: 70
0.67 0.21 0.12
Matches are distributed among these distances:
156 2 0.01
157 5 0.01
158 52 0.13
159 147 0.38
160 45 0.12
161 129 0.33
162 5 0.01
163 3 0.01
164 3 0.01
ACGTcount: A:0.32, C:0.17, G:0.14, T:0.37
Consensus pattern (160 bp):
TTCTTTTCAAGATTAGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTG
GTGTTGCAAGAGAAGCTGTTCTTTCCACAATTATTTATAGAATCAAAGTTTGTCTCTTAAATAAA
ACAAACTTGAATAGTCATATTAATCTCACA
Found at i:203909 original size:158 final size:157
Alignment explanation
Indices: 203313--210286 Score: 1522
Period size: 158 Copynumber: 44.1 Consensus size: 157
203303 ACGGATATAG
* * * * * * * * *
203313 GATATTGATGATATGATTTCGCAAGAAACGCTTTTTTCCCA-TAATTTTTGCAAATTCTAAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCAAAGTTT
* * * * * * * ** * *
203377 ATGCCTCAAATGAGACAAACATTGATTCT-AGTAAGGATCTTCATTCATTTTGTGATTAAGCACT
65 GTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGCACC
*
203441 ATAAACACATTCTCCTCATTAGGATTA-AT
130 ATAAACATATTCT-CTCATTAGGA-TACAT
* ** * * * * *
203470 GATATTGATGGTTTTCTTTTGCATGGAAATC-TTTTCTTTGCC-TC-ATTTTCCT-TAAAATCAA
1 GATATTGATGCTTTGGTTTCGCA-AGAAA-CACTTTC-TTCCCACCAATTTT--TGT-AAATCAA
* * * * * *
203531 AGTTTGTACTTTAAATGAGGCAAGCATTGATTCTC-GTA-AAAGTCTCCATTCATTCTAAT-ATT
60 AGTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATT-TCATGATT
* * * * ** *
203593 -GGGAACA-AGAACACATTCCCTTTGTTAGGATGCAT
123 AGGCACCATA-AACATATTCTC-TCATTAGGATACAT
* * ** * * * *
203628 GACATTGATACTTTGGGGTCACAAGAGAAGC-TTTTCTTTCCACC-ATTATTGATAGAATCAAAG
1 GATATTGATGCTTTGGTTTCGCAAGA-AA-CACTTTCTTCCCACCAATTTTTG-TA-AATCAAAG
* * * * * * * *
203691 TTTGT-CTCTCAAATAAGAAAAACATGAATACACA-AACTAATC-CACATTC-TATTC-TAGATT
62 TTTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTC-CATTCAT-TTCAT-GATT
* * *
203751 AGGCACCATAAACATAGTCATCTAATAAGGATACAT
123 AGGCACCATAAACATATTC-TCTCATTAGGATACAT
* *
203787 GATATTGATGCTTTGGTTTCACAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCAAAGTTT
* * * * * * *
203852 GTGCCTCAAATGAGACAAGCATGGATTC-CAGTACGGATCTTCATTCATTTCATGATTAGGAACA
65 GTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGCACC
* * *
203916 ACAAACACATTCTCCTCATTAGGATAAAT
130 ATAAACATATTCT-CTCATTAGGATACAT
* ** * ** * ** **
203945 GATATTGATGGTTTTCTTTTGCTTGAAA-ATCTTTTCCTT-GC-CTTATTTTCCATAACATCAAA
1 GATATTGATGCTTTGGTTTCGCAAGAAACA-C-TTT-CTTCCCACCAATTTT-TGTAA-ATCAAA
* ** * * *
204007 GTTTGTACTTTAAATGAGACACGCATTGATTCTC-GTA-AAAGTCTCTATTC--TT--T--TTAG
61 GTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTCATGATTAG
* * * *
204064 GAACGA-AATACACATTCCTTTCATTAGGATACAT
125 GCACCATAA-ACATATT-CTCTCATTAGGATACAT
* * * * * *
204098 GACATTGATGCTTTGGTGTCGCAAGAGAAGC-TTTTCTTTCCACC-GTTATTGATAGAATCAAAG
1 GATATTGATGCTTTGGTTTCGCAAGA-AA-CACTTTCTTCCCACCAATTTTTG-TA-AATCAAAG
* * * * * * * *
204161 -TTGT-CTCTTAAATAAGACAAACATGAATACTCA-TGCTAATCCCCATTCTTTTCAGGATTAGG
62 TTTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGG
* * *
204223 CACCATAAACATAGTCTTCTCATAAGGATGCAT
126 CACCATAAACATATTC-TCTCATTAGGATACAT
* * * * * *
204256 GATATTGATGCTTTGGATTCACAAGATACGCTTTCTT-CCATCCAATTTGTGTAAAGT-ATCAGT
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCA-CCAATTTTTGTAAA-TCA-AAGT
* * * * * *
204319 TCAT-TA-CTCAAATGAGACAAACTTGGATTCT-TGTAGGGATCTTCATTCATTTCATGATTAGG
63 T--TGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGG
* * * *
204381 CACTATAAACACATTCTGCTCTTTAGGATAAAT
126 CACCATAAACATATTCT-CTCATTAGGATACAT
* * ** * * ** **
204414 GATTTTGATGGTTTTCTTTTGCATGAAA-ATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAAA
1 GATATTGATGCTTTGGTTTCGCAAGAAACA-C-TTTCTTCCCACCAATTTT--TGT-AAATCAAA
* * ** * * * * * *
204476 GTTTGTACTTTATATGAGACATGCATTGATTCTC-GTA-AAAGTCCCCTTTCTTTTCAAGATTAG
61 GTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTCATGATTAG
* *
204539 G-ATCCAAAAACTTATT-TCCTTCATTAGGATACAT
125 GCA-CCATAAACATATTCT-C-TCATTAGGATACAT
* * * * * * * ** * *
204573 GACATTAATGCTTTGGTGTCACAAGAGAA-GCTTGTCTTTCC-GCTGTTATTGATAGAATCAAGG
1 GATATTGATGCTTTGGTTTCGCAAGA-AACACTT-TCTTCCCACCAATTTTTG-TA-AATCAAAG
* * * * * * * *
204636 TTTGT-CTTTTAAATAAGACAAACATGAATACTCA-TACTAATCCCCTTTC-TTGTCAGGATTAG
62 TTTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATT-TCATGATTAG
*
204698 GCACCATAAACATAGTAT-TCTCATAAGGATACAT
125 GCACCATAAACATA-T-TCTCTCATTAGGATACAT
* * * * * * ** *
204732 GATATTAATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCTATTCTTATAAAGAATAAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATCA-AAGTTT
* * * * * * * * * ** * *
204797 ATTCCTCAAATTAGAGAAACATAGATTCT-AGTAAGGATCTTCATTCATTTTGTCATTAGGCACT
65 GTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGCACC
*
204861 ATAAACACATTCTTCTCATTAGGATTA-AT
130 ATAAACATATTC-TCTCATTAGGA-TACAT
* ** * * * * *
204890 GATATTGATGGTTTTCTTTTGCATGGAAATC-TTTTCTTTGCC-TC-ATTTTCCT-TAAAATCAA
1 GATATTGATGCTTTGGTTTCGCA-AGAAA-CACTTTC-TTCCCACCAATTTT--TGT-AAATCAA
* * * * * *
204951 AGTTTATACTTTAAATGAGGCAAGCATTGATTCTCA-TA-AAAGTCTCCATTC-TTTCTAAT-AT
60 AGTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTC--ATGAT
* * * * ** *
205012 T-GGGAACA-AGAACACATTCCCTTTGTTAGGATGCAT
122 TAGGCACCATA-AACATATTCTC-TCATTAGGATACAT
* * * * *** * *
205048 GACATTGATACTTTGGTGTCACAAGAGAAGTTTTTCTTTCCACC-ATTATTGATAGAATCAAAGT
1 GATATTGATGCTTTGGTTTCGCAAGA-AACACTTTCTTCCCACCAATTTTTG-TA-AATCAAAGT
* * * * * ** * * *
205112 TTGTCCCTCAAATAAGAAAAACATGAAAACACA-TACTAATC-CACATTC-TAT-ACTAGATTAG
63 TTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTC-CATTCATTTCA-T-GATTAG
* * *
205173 GCACCATAAACATAGTCATCTAATAAGGATACAT
125 GCACCATAAACATATTC-TCTCATTAGGATACAT
*
205207 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCAAAGTTT
* * * * * * *
205272 GTGCCTCAAATGAGACAAGCGTGGATTC-CAGTAAGGATCAT-CATTCATTTCATGATTAGGAAC
65 GTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATC-TCCATTCATTTCATGATTAGGCAC
* *
205335 TATAAACATATTCTCCTCATTAGGATAAAT
129 CATAAACATATTCT-CTCATTAGGATACAT
* ** * * *
205365 GATATTGATGGTTTTCTTTTGCATGAAA-A-TCTT-TTCCTTA-CATTATTTTCCT-TAAAATCA
1 GATATTGATGCTTTGGTTTCGCAAGAAACACT-TTCTTCC-CACCA--ATTTT--TGT-AAATCA
* ** * * * * *
205425 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTC-GTA-AAAGTCTCCACTCTTTTCAAGATT
59 AAGTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTCATGATT
* * * * * * *
205488 GGGAACTAAAAACACATTCCTTTCATTAGGATGCAT
123 AGGCACCATAAACATATT-CTCTCATTAGGATACAT
* * * * * * *
205524 GACATTGATGCTTTGGTGTCGCAAGAGAAGC-TTTTCTTTCCACC-GTTATCGATAGAATCAAAG
1 GATATTGATGCTTTGGTTTCGCAAGA-AA-CACTTTCTTCCCACCAATTTTTG-TA-AATCAAAG
* * * * * * *
205587 -TTGT-CTCTTAAATAAGACAAACATGAATACTCA-TACTAATCCCCATTCTTTTCAGGATTAGG
62 TTTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGG
* * *
205649 CACCATAAACATAGTCTTCTCATAAGGATGCAT
126 CACCATAAACATATTC-TCTCATTAGGATACAT
* * * * * ** * *
205682 GATATTGATGCTTTGGATTCACAAGATACGCTGTCTTCTAACCAATTTGTGTAAAGT-ATGAGTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCA-AAGTT
** ** * * * * * *
205746 CATTGCTCAAATGAGACAAACATGGATTCTTA-TAGGGATCTTCATTCATTTCGTGATTAGGCAC
64 TGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGCAC
* * ** *
205810 TATAAACAAATTCTCCTTTTTAGGATAAAT
129 CATAAACATATTCT-CTCATTAGGATACAT
* ** * * * ** **
205840 GATATTGATGGTTTTCTTTTGCATGGAAATC-TTTTCTTTGC-CTTATTTTCCT-TAAAATCAAA
1 GATATTGATGCTTTGGTTTCGCA-AGAAA-CACTTTCTTCCCACCAATTTT--TGT-AAATCAAA
* ** * * * * * *
205902 GTTTGTACTTTAAATGAGACATGCATTGATTCTC-GTA-AAAGTCTCCATTCTTTTCAAGTTTGG
61 GTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTCATGATTAG
* * * *
205965 GAACCAAAAACACATTCCCTTCATTAGGATACAT
125 GCACCATAAACATATTCTC-TCATTAGGATACAT
* * **
205999 GACATTGATGCTTTGGTGTCGCAA-AAGAGGCTTTTCTTTCCC-CC--TTTTTCGATAAAATCAA
1 GATATTGATGCTTTGGTTTCGCAAGAA-ACAC-TTTC-TTCCCACCAATTTTT-G-T-AAATCAA
* * * * ** * * ** *
206060 AATTTGT-CTCTTAAATAAGATAAACATGAATAGTCA-TACTAATCCCCATTTTTTTTCAGGATT
60 AGTTTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCA-TTCATTTCATGATT
*
206123 AGGCACCATAAACATAGTCTTCTCA-TAGGGATACAT
123 AGGCACCATAAACATATTC-TCTCATTA-GGATACAT
* * * * * ** * *
206159 GATATTGATGCTTTGGATTCACAAGATACGCTGTCTTCTAACCAATTTGTGTAAAGT-ATGAGTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCA-AAGTT
** ** * * * * * * *
206223 CATTGCTCAAATGAGACAAACATGGATTCT-TGTAGGGATTTTCATTTATTTCATGATTAGGCAC
64 TGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGCAC
* * * *
206287 TATAAACACATTCTGCTCTTTAGGATAAAT
129 CATAAACATATTCT-CTCATTAGGATACAT
* ** * * * ** ** *
206317 GATATTGATGGTTTTCTTTTGCATCGAAATC-TTTTCTTTGC-CTTATTTTCCT-TAAAATCAAT
1 GATATTGATGCTTTGGTTTCGCA-AGAAA-CACTTTCTTCCCACCAATTTT--TGT-AAATCAAA
* * ** * * * * * *
206379 GTTTGTACTTTATATGAGACAGGCATTGATTCTC-GTA-AAAGTATCCATT-TTTTCAGGATTGG
61 GTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTCATGATTAG
* * ** *
206441 GAACCAAAAACACGTTCCCTTCATTAGGATACAT
125 GCACCATAAACATATTCTC-TCATTAGGATACAT
* ** * * * * *
206475 GACATTGATGCTTTGGTGCCGCAA-AAGA-AGCTTTTCTTTCCAAC-GTTATCGATAAAATCAAA
1 GATATTGATGCTTTGGTTTCGCAAGAA-ACA-C-TTTCTTCCCACCAATTTTTG-T-AAATCAAA
* * * * * * * * * *
206537 ATTTAT-CTCTTAAAT-ATGATAAACTTGAATACTC-TTACTAATC-CCATTCTTTTCAGGATTA
61 GTTTGTAC-CTTAAATGA-GACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTA
* * * * *
206598 GGCACCATAAACATAGTCT-TCTTATACAGATATAG
124 GGCACCATAAACATATTCTCTCAT-TA-GGATACAT
* * * * *
206633 GATATTGATGATTTGGTTTCAG-GAGAAACGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTT
1 GATATTGATGCTTTGGTTTC-GCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCAAAGTT
* * * * * *
206696 TGTGCCTCAAATGAGACAAACAAGGATTCT-AGTAAAGATAT-T-CGTTTATTTCATGATTAGGC
64 TGTACCTTAAATGAGACAAACATGGATTCTCAGT-ACGA-ATCTCCATTCATTTCATGATTAGGC
* * *
206758 ACTATAAACACATTCTCCTCATTAGGATAAAT
127 ACCATAAACATATTCT-CTCATTAGGATACAT
* * * ** **
206790 GATATTGAT--TTT-GCTT-G-AA-AATC-TTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGT
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTT--TGT-AAATCAAAGT
* * ** * * * * * * *
206846 TTATACTTTAAATGAGACATGCATTGATCCTC--TTCAAAGTCCCCATTC-TTTCCAAGATTTGG
63 TTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTT-CATGATTAGG
* *
206908 -ATCCAAAAAC-TCATT-TCCTTCATTAGGATACAA
126 CA-CCATAAACAT-ATTCT-C-TCATTAGGATACAT
* * * * * * * ** * *
206941 GACATTGATGCTTTGGTGTCGCAAGAGAA-GCTTTTTTTCTA-CTATTAATGACAAAATCGAAGT
1 GATATTGATGCTTTGGTTTCGCAAGA-AACACTTTCTTCCCACCAATTTTTG--TAAATCAAAGT
* * * * * * * *
207004 TTGT-CTCTTAAATAAGACATACATGAATACTCA-TACTAATCCCCATTCTTTTCAGGATTAGGC
63 TTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGC
* *
207067 ACCATAAACATAGTAT-TCTTATAAGGATACAT
127 ACCATAAACATA-T-TCTCTCATTAGGATACAT
** * * *
207099 GATGGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTTTAAATTCTAAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCAAAGTTT
* * * * * * * * * * *
207164 CTGCCTCAAATGAGACAAACATGGATT-TTAGTAAGGATCTTCATTCATTTCGTGATAAGGAACT
65 GTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGCACC
* * *
207228 ATTAGCATATTCTCCTCATTAGGATAAAT
130 ATAAACATATTCT-CTCATTAGGATACAT
* ** * * ** **
207257 GATATTGATGGTTTTCTTTTC-CATGGAAATC-TTTTCTTTGC-CTTATTTTCCT-TAAAATCAA
1 GATATTGAT-GCTTTGGTTTCGCA-AGAAA-CACTTTCTTCCCACCAATTTT--TGT-AAATCAA
* * ** * * * *
207318 AGCTTGTACTTTAAATGAGACATGCATTGATTCTC-GTA-AAAGTCTCCATTCTTTTCAAGATT-
60 AGTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTCATGATTA
* * * *
207380 GAGAACCAAAAACACATTCCTTTCATTAGGATACAT
124 G-GCACCATAAACATATT-CTCTCATTAGGATACAT
* * *** * ** *
207416 GACATTGATGCTTTGGTGTCGCAAGAGAAGTTTTTCTTTCCA-CTGTTATTGATAAAATCAAAG-
1 GATATTGATGCTTTGGTTTCGCAAGA-AACACTTTCTTCCCACCAATTTTTG-T-AAATCAAAGT
* * * * * * * *
207479 TTGT-CTCTTAAATAAGACAAACATGAATACTC-CTACTAATCCCCATTCTTTTCAGGATTAGGC
63 TTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGC
* ** *
207542 ACCATAAACATAGTCTTCTCACAAGGATGCAT
127 ACCATAAACATATTC-TCTCATTAGGATACAT
* * ** ** ** * **
207574 GATATTGATGCTTTGGATTCGCAAGATATGCTTTCTTCCTGCCTGTTTGTGTAAAGT-ATGGGTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCA-AAGTT
** ** ** * * * * *
207638 CATTGCACAAATGAGACAAACATGGATTCT-TGTAGGGATCTTCATTCATTTCGTGATTAGGCAC
64 TGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGCAC
* * * * *
207702 TATAAACACATTCTGTTC-TATAAGATAAAT
129 CATAAACATATTCT-CTCAT-TAGGATACAT
* ** * * * ** ** *
207732 GATATTGATGGTTTTCTTTTGCATGGAAATC-TTTTCTTTGC-CTTATTTTTCTTAAAATCAAAG
1 GATATTGATGCTTTGGTTTCGCA-AGAAA-CACTTTCTTCCCACCAATTTTT-GT-AAATCAAAG
* * ** * * * * * * *
207795 TTTGTACTTTAATTGAGACATGCATTGATTGTCA-TA-AAAGTCTTCGTTCTTTTCAAGATTAGG
62 TTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTCATGATTAGG
* * *
207858 AACCAAAAACACATT-TCCTTCATTAGGATACAT
126 CACCATAAACATATTCT-C-TCATTAGGATACAT
* * * * ** * * ** *
207891 GACATTGATGCTTTGGTGTCACAAGAGAGGCTTTTCTTTCCAAC-GGTATTGATAAAATCAAAGT
1 GATATTGATGCTTTGGTTTCGCAAGAAACAC-TTTCTTCCCACCAATTTTTG-T-AAATCAAAGT
* * * * * * * * * *
207955 TTGT-CTCTTAAATAAGACAAGCATGAATACTCA-TACTAATCCCCATTCTTTTTAGGATTAGGT
63 TTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGC
* * *
208018 GCCATAAACATAATCTTCTCATAAGGATACAT
127 ACCATAAACATATTC-TCTCATTAGGATACAT
* * * ** * * * *
208050 GATATTGATGCTTTAGTTTCACAAGATATGCTTTCTTCCCACCAATTTGTGTAAATTATGAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATCA-AAGTTT
* ** * * * * * * * *
208115 ATTGCTGAATTGAGACAAACATGGATTCT-TGTAGGGATCTTCATTCATTTCGTGATTAGGCACT
65 GTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGCACC
* * *
208179 ATAAACACATTCTCCTCTTTAGGATAAAT
130 ATAAACATATTCT-CTCATTAGGATACAT
* ** * * * ** **
208208 GATATTGATGGTTTTCTTTTGCATGGAAATC-TTTTCTTTGC-CTTATTTTCCT-TAAAATCAAA
1 GATATTGATGCTTTGGTTTCGCA-AGAAA-CACTTTCTTCCCACCAATTTT--TGT-AAATCAAA
* * ** * * *** * * *
208270 GTTTGTTCTTTAAATGAGACATGCATTGATTCTCA-TA-AAAGTCTTTTTTCTTTTCAAGATTGG
61 GTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTCATGATTAG
* * * *
208333 GAACCAAAAACACATTCCCTTCATTAGGATACAT
125 GCACCATAAACATATTCTC-TCATTAGGATACAT
* * ** * * * * * * *
208367 GACATTGATGCTTTGGTGTCGCAAGAAAGGCTTTTCTTTCTAAC-GTTATCGATAAAATCAAAAT
1 GATATTGATGCTTTGGTTTCGCAAGAAACAC-TTTCTTCCCACCAATTTTTG-T-AAATCAAAGT
* * * * * * * * *
208431 TTGT-CGCTTAAATAAGATAAACTTGAATACTCA-TACTAATC-CTATTCTTTTCAGGATTAGGC
63 TTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGC
* * * * *
208493 ACCCTAAACATAGTCT-TCTTATACGGATATAG
127 ACCATAAACATATTCTCTCAT-TA-GGATACAT
* * * * * * * **
208525 GATATAGATGATTTGGTTTAGCGAGAAACGCTTTTTTCCCA-CAATTCTTGTAAATTGTAAGTTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCAAAGTTT
* * * * *
208589 GTGCCTCAAATGAGGCAAACATGGATTCT-AGTGAAG-ATCTTCATTCATTTCATGATTAGGCAC
65 GTACCTTAAATGAGACAAACATGGATTCTCAGT-ACGAATCTCCATTCATTTCATGATTAGGCAC
* * *
208652 TATAAACACATTCTCCTCATTAGGATAAAT
129 CATAAACATATTCT-CTCATTAGGATACAT
* ** * ** * ** **
208682 GATATTGATGATTTTCTTTTGCTTGGAAATC-TTTTCTTTGC-CTTATTTTCCT-TAAAAGT-AA
1 GATATTGATGCTTTGGTTTCGC-AAGAAA-CACTTTCTTCCCACCAATTTT--TGT-AAA-TCAA
* ** * ** * * * * *
208743 AGTTTATATGTTAAATTAGACATGCATTGATTCTTA-TA-AAAGTCTCCATTCTTTTCAAGATTA
60 AGTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTCATGATTA
* * * * * *
208806 GGAACCAAAAACACAATCCCTGCTTTAGGATACAT
124 GGCACCATAAACATATTCTCT-CATTAGGATACAT
* * * * ** * * * * *
208841 GACATTGATGCTTTGGTGTCACAAGAGAGGCTTTTCTTTCCATC-ATTATCGATAAAATCAAAAT
1 GATATTGATGCTTTGGTTTCGCAAGAAACAC-TTTCTTCCCACCAATTTTTG-T-AAATCAAAGT
* * * * * * * *
208905 TTG-CCTCTTAAATAAGACAAACATGAATACTCA-TGCTAATC-CCATTC-TTTTAGGATTAGGC
63 TTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGC
* * * * * *
208966 ACCATAACCAAAGTCT-TCTTATACGGATGCAG
127 ACCATAAACATATTCTCTCAT-TA-GGATACAT
* ** * * *
208998 GATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCAAAGTTT
** * * * *
209062 GTGTCTCAAATGAGACAAACATGGATTCT-GGTA-AAGATCTTCATTCATTTCGA-GATTAGGCA
65 GTACCTTAAATGAGACAAACATGGATTCTCAGTACGA-ATCTCCATTCATTTC-ATGATTAGGCA
* * *
209124 CTATAAACACATTCTCCTCATTAGGATAAAT
128 CCATAAACATATTCT-CTCATTAGGATACAT
* ** * * ** **
209155 GATATTGATGGTTTTCTTT-GCTTAGAAATC-TTTTCTTTGC-CTTATTTTCCT-TAAAATCAAA
1 GATATTGATGCTTTGGTTTCGC-AAGAAA-CACTTTCTTCCCACCAATTTT--TGT-AAATCAAA
* ** * * * * *
209216 GTTTGTACTTTAAATGAGACATGCGTTGATTCTC-GT-CAAAGTCCCCATTC-TTTCGAAGATTA
61 GTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTC-ATGATTA
* * *
209278 GG-ATCCAAAAAC-TCATTTCTTTCATTAAGATACAT
124 GGCA-CCATAAACAT-A-TTCTCTCATTAGGATACAT
* * ** * * ** *
209313 GACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTTCTT-CTA-CTATTAATGATAAAATCGAAG
1 GATATTGATGCTTTGGTTTCGCAAGA-AA-CACTTTCTTCCCACCAATTTTTG-T-AAATCAAAG
* * * * * * *
209376 TTTGT-CTCTTAAATAAGACAAACATGAATACTCA-TACTAATCCCCATTCTTTTCAGGATTAGG
62 TTTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGG
* ** *
209439 CACCATAAACATAATCTTCTCACAAGGATGCAT
126 CACCATAAACATATTC-TCTCATTAGGATACAT
* * ** * ** * **
209472 GATATTGATGCTTTGGATTCGCAAGATATGCTTTCTTCCTACCTGTTTGTGTAAAGT-ATGGGTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCA-AAGTT
** ** * * * * * * *
209536 CATTGCTCAAATGAGACAAACATGGATTCT-TGTAGGGATCTTCATTCATTTCGTGATTAGGCAT
64 TGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGCAC
* * * * *
209600 GATAAACACATTATGTTC-TATAGGATAAAT
129 CATAAACATATTCT-CTCAT-TAGGATACAT
* ** * *
209630 GATATTGATGGTTTTCTTTTC-CATAGAAATC-TTTTCTT--CACCTTATTTTCCT-TAAAATCA
1 GATATTGAT-GCTTTGGTTTCGCA-AGAAA-CACTTTCTTCCCACC-AATTTT--TGT-AAATCA
* * ** * * * *
209690 AAGTTTCTACTTTAAATGAGACATGCATTGATTCTC-GTA-AAAGTCTCCATTCTTTTCAAGATT
59 AAGTTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTCATGATT
* * * * *
209753 -GAGAACCAAATATACAT-TCCTTTCATTAGGATACAA
123 AG-GCACC--ATAAACATATTCTCTCATTAGGATACAT
* * * * * * * *
209789 GACATTCATGCTTTGGTGTCGTAAGAGAAGC-TTTTCTTTCCACC-GTTATTGATAAAATCAAAG
1 GATATTGATGCTTTGGTTTCGCAAGA-AA-CACTTTCTTCCCACCAATTTTTG-T-AAATCAAAG
* ** * * * * * * *
209852 -TTGT-CTCTTAAATAAGACTTACATGAATACTCA-TACTAATCCCCATTCTTTTTAGGATTAGG
62 TTTGTAC-CTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGG
* ** *
209914 CACCATAAACATAGTCTTCTCACAAGGATGCAT
126 CACCATAAACATATTC-TCTCATTAGGATACAT
* * * * * * * * **
209947 GATATTGATGCTTTTGATTCACAAGATACGCTTTCTTCCTACCAGTTTGTGTAAAGT-ATGGGTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAA-TCA-AAGTT
* ** * * * * * * *
210011 CGTTGCTCAAATGAGACAAACATGGATTCT-TGTAGGGATCTTCATTCATTTCGTGATTAGGCGC
64 TGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGCAC
* * * * *
210075 TATAAGCACATTCTGCTCTTTAGGATAAAT
129 CATAAACATATTCT-CTCATTAGGATACAT
* ** * * * ** ** *
210105 GATATTGATGGTTTTCTTTTGCATGGAAATC-TTTTCTTTGC-CTTATTTTTCTTAAAATCAAAG
1 GATATTGATGCTTTGGTTTCGCA-AGAAA-CACTTTCTTCCCACCAATTTTT-GT-AAATCAAAG
* ** * * * * * *
210168 TTTGTACTTTAAATGAGACATGCATTGATTCTCA-TA-AAAGTCTTCATTCTTTTCAAGATTGGG
62 TTTGTACCTTAAATGAGACAAACATGGATTCTCAGTACGAA-TCTCCATTCATTTCATGATTAGG
* * *
210231 AACCAAAAACACATT-TCCTTCATTAGGATACAT
126 CACCATAAACATATTCT-C-TCATTAGGATACAT
* * *
210264 GACATTTATGCTTTGGTGTCGCA
1 GATATTGATGCTTTGGTTTCGCA
210287 GGAGAGGCTT
Statistics
Matches: 4846, Mismatches: 1510, Indels: 920
0.67 0.21 0.13
Matches are distributed among these distances:
148 1 0.00
149 2 0.00
150 19 0.00
151 73 0.02
152 42 0.01
153 68 0.01
154 17 0.00
155 50 0.01
156 135 0.03
157 427 0.09
158 2029 0.42
159 1764 0.36
160 192 0.04
161 22 0.00
162 5 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (157 bp):
GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATCAAAGTTTG
TACCTTAAATGAGACAAACATGGATTCTCAGTACGAATCTCCATTCATTTCATGATTAGGCACCA
TAAACATATTCTCTCATTAGGATACAT
Found at i:205246 original size:475 final size:476
Alignment explanation
Indices: 203313--212184 Score: 11421
Period size: 475 Copynumber: 18.8 Consensus size: 476
203303 ACGGATATAG
* * * * * * * *
203313 GATATTGATGATATGATTTCGCAAGAAACGCTTTTTTCCCA-TAATTTTTGCAAATTCTAAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * *
203377 ATGCCTCAAATGAGACAAACATTGATTCTAGTAAGGATCTTCATTCATTTTGTGATTAAGCACTA
66 ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
*
203442 TAAACACATTCTCCTCATTAGGATTAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
131 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * *
203507 TTGCCTCATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGGCAAGCATTGATTCTCGTAAAA
196 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
* * * * *
203572 GTCTCCATTC-ATTCTAATATTGGGAA-CAAGAACACATTCCCTTTGTTAGGATGCATGACATTG
261 GTCTCCATTCTTTTC-AAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTG
* * * * *
203635 ATACTTTGGGGTCACAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGTTTGTCTCT
325 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCT
* * * * * *
203700 CAAATAAGAAAAACATGAATACACAAACTAATCCACATTCTATTCTA-GATTAGGCACCATAAAC
390 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTC-AGGATTAGGCACCATAAAC
* *
203764 ATAGTCATCTAATAAGGATACAT
454 ATAGTCTTCTCATAAGGATACAT
* * * * *
203787 GATATTGATGCTTTGGTTTCACAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * * * * * *
203852 GTGCCTCAAATGAGACAAGCATGGATTCCAGTACGGATCTTCATTCATTTCATGATTAGGAACAA
66 ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * * *
203917 CAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCTTGAAAATCTTTTCC
131 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * *
203982 TTGCCTTATTTTCCATAACATCAAAGTTTGTACTTTAAATGAGACACGCATTGATTCTCGTAAAA
196 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
* * * *
204047 GTCTCTATTC-TTT-----TTAGGAACGAAATACACATT-CCTTTCATTAGGATACATGACATTG
261 GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTT-ATTAGGATACATGACATTG
*
204105 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAG-TTGTCTCT
325 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCT
*
204169 TAAATAAGACAAACATGAATACTCATGCTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
390 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
*
204234 TAGTCTTCTCATAAGGATGCAT
455 TAGTCTTCTCATAAGGATACAT
* * * * *
204256 GATATTGATGCTTTGGATTCACAAGATACGCTTTCTT-CCATCCAATTTGTGTAAAGTATCAGTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCA-CCAATTTGTGTAAATTATAAGTT
* * * * *
204320 CATTACTCAAATGAGACAAACTTGGATTCTTGTAGGGATCTTCATTCATTTCATGATTAGGCACT
65 CATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT
* * * *
204385 ATAAACACATTCTGCTCTTTAGGATAAATGATTTTGATGGTTTTCTTTTGCATGAAAATCTTTTC
130 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
*
204450 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTCGTAAA
195 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
* * * * ** * * *
204515 AGTCCCCTTTCTTTTCAAGATTAGGATCCAAAAACTTATTTCCTTCATTAGGATACATGACATTA
260 AGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTG
* * * * * * *
204580 ATGCTTTGGTGTCACAAGAGAAGCTTGTCTTTCCGCTGTTATTGATAGAATCAAGGTTTGTCTTT
325 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCT
* *
204645 TAAATAAGACAAACATGAATACTCATACTAATCCCCTTTCTTGTCAGGATTAGGCACCATAAACA
390 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
*
204710 TAGTATTCTCATAAGGATACAT
455 TAGTCTTCTCATAAGGATACAT
* * * * **
204732 GATATTAATGCTTTGGTTTCGCAAGATACGCTTTCTTCCCACCTATTCT-TATAAAGAATAAGTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATT-TGTGTAAATTATAAGTT
* * * * *
204796 CATTCCTCAAATTAGAGAAACATAGATTCTAGTAAGGATCTTCATTCATTTTGTCATTAGGCACT
65 CATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT
* *
204861 ATAAACACATTCTTCTCATTAGGATTAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
130 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* * * * *
204926 TTTGCCTCATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAGGCAAGCATTGATTCTCATAAA
195 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
* * * *
204991 AGTCTCCATTC-TTTCTAATATTGGGAA-CAAGAACACATTCCCTTTGTTAGGATGCATGACATT
260 AGTCTCCATTCTTTTC-AAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATT
* * * * * *
205054 GATACTTTGGTGTCACAAGAGAAGTTTTTCTTTCCACCATTATTGATAGAATCAAAGTTTGTCCC
324 GATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTC
* * * * * * *
205119 TCAAATAAGAAAAACATGAAAACACATACTAATCCACATTCTATACTA-GATTAGGCACCATAAA
389 TTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTC-AGGATTAGGCACCATAAA
* *
205183 CATAGTCATCTAATAAGGATACAT
453 CATAGTCTTCTCATAAGGATACAT
* * * *
205207 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * * * * * *
205272 GTGCCTCAAATGAGACAAGCGTGGATTCCAGTAAGGATCATCATTCATTTCATGATTAGGAACTA
66 ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * *
205337 TAAACATATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCC
131 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* *
205402 TTACATTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
196 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
* * *
205467 GTCTCCACTCTTTTCAAGATTGGGAACTAAAAACACATT-CCTTTCATTAGGATGCATGACATTG
261 GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTT-ATTAGGATACATGACATTG
* *
205531 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATCGATAGAATCAAAG-TTGTCTCT
325 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCT
205595 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
390 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
*
205660 TAGTCTTCTCATAAGGATGCAT
455 TAGTCTTCTCATAAGGATACAT
* * * * ** * *
205682 GATATTGATGCTTTGGATTCACAAGATACGCTGTCTTCTAACCAATTTGTGTAAAGTATGAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* *
205747 ATTGCTCAAATGAGACAAACATGGATTCTTA-TAGGGATCTTCATTCATTTCGTGATTAGGCACT
66 ATTCCTCAAATGAGACAAACATGGATTC-TAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT
* **
205811 ATAAACAAATTCTCCTTTTTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
130 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
205876 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
195 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
* *
205941 AGTCTCCATTCTTTTCAAGTTTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTG
260 AGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTG
* * * * *
206006 ATGCTTTGGTGTCGCAAAAGAGGCTTTTCTTTCC-CCCTTTTTCGATAAAATCAAAATTTGTCTC
325 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATT-GATAAAATCAAAGTTTGTCTC
* * *
206070 TTAAATAAGATAAACATGAATAGTCATACTAATCCCCATTTTTTTTCAGGATTAGGCACCATAAA
389 TTAAATAAGACAAACATGAATACTCATACTAATCCCCA-TTCTTTTCAGGATTAGGCACCATAAA
*
206135 CATAGTCTTCTCATAGGGATACAT
453 CATAGTCTTCTCATAAGGATACAT
* * * * ** * *
206159 GATATTGATGCTTTGGATTCACAAGATACGCTGTCTTCTAACCAATTTGTGTAAAGTATGAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * * * *
206224 ATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGATTTTCATTTATTTCATGATTAGGCACTA
66 ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * *
206289 TAAACACATTCTGCTCTTTAGGATAAATGATATTGATGGTTTTCTTTTGCATCGAAATCTTTTCT
131 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * *
206354 TTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTATATGAGACAGGCATTGATTCTCGTAAAA
196 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
* * * *
206419 GTATCCATT-TTTTCAGGATTGGGAACCAAAAACACGTTCCCTTCATTAGGATACATGACATTGA
261 GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTGA
* * * * * *
206483 TGCTTTGGTGCCGCAAAAGAAGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTATCTCTT
326 TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTT
* * * *
206548 AAATATGATAAACTTGAATACTCTTACTAAT-CCCATTCTTTTCAGGATTAGGCACCATAAACAT
391 AAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACAT
* * *
206612 AGTCTTCTTATACA-GATATAG
456 AGTCTTCTCATA-AGGATACAT
* * * * *
206633 GATATTGATGATTTGGTTTCAG-GAGAAACGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTT
1 GATATTGATGCTTTGGTTTC-GCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTT
** * * * * * * *
206696 TGTGCCTCAAATGAGACAAACAAGGATTCTAGTAAAGATATTCGTTTATTTCATGATTAGGCACT
65 CATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT
*
206761 ATAAACACATTCTCCTCATTAGGATAAATGATATTGAT--TTTGC--TTG-A---AAATCTTTTC
130 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* * * *
206818 TTTGCCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAGACATGCATTGATCCTCTTCAA
195 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
* * * * * * * *
206883 AGTCCCCATTCTTTCCAAGATTTGGATCCAAAAACTCATTTCCTTCATTAGGATACAAGACATTG
260 AGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTG
* ** * * *
206948 ATGCTTTGGTGTCGCAAGAGAAGCTTTT-TTTCTACTATTAATGACAAAATCGAAGTTTGTCTCT
325 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCT
*
207012 TAAATAAGACATACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
390 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
* *
207077 TAGTATTCTTATAAGGATACAT
455 TAGTCTTCTCATAAGGATACAT
** * * * *
207099 GATGGTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTTTAAATTCTAAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * * *
207164 CTGCCTCAAATGAGACAAACATGGATTTTAGTAAGGATCTTCATTCATTTCGTGATAAGGAACTA
66 ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * * *
207229 TTAGCATATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTCCATGGAAATCTTTTCT
131 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
*
207294 TTGCCTTATTTTCCTTAAAATCAAAGCTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
196 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
*
207359 GTCTCCATTCTTTTCAAGATTGAGAACCAAAAACACATT-CCTTTCATTAGGATACATGACATTG
261 GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTT-ATTAGGATACATGACATTG
* *
207423 ATGCTTTGGTGTCGCAAGAGAAGTTTTTCTTTCCACTGTTATTGATAAAATCAAAG-TTGTCTCT
325 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCT
*
207487 TAAATAAGACAAACATGAATACTCCTACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
390 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
* *
207552 TAGTCTTCTCACAAGGATGCAT
455 TAGTCTTCTCATAAGGATACAT
* * * ** ** * **
207574 GATATTGATGCTTTGGATTCGCAAGATATGCTTTCTTCCTGCCTGTTTGTGTAAAGTATGGGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * *
207639 ATTGCACAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGATTAGGCACTA
66 ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
** *
207704 TAAACACATTCTGTTC-TATAAGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
131 TAAACACATTCTCCTCAT-TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* * * *
207768 TTTGCCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAATTGAGACATGCATTGATTGTCATAAA
195 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
* * * * *
207833 AGTCTTCGTTCTTTTCAAGATTAGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTG
260 AGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTG
* * * *
207898 ATGCTTTGGTGTCACAAGAGAGGCTTTTCTTTCCAACGGTATTGATAAAATCAAAGTTTGTCTCT
325 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCT
* * **
207963 TAAATAAGACAAGCATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGTGCCATAAACA
390 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
*
208028 TAATCTTCTCATAAGGATACAT
455 TAGTCTTCTCATAAGGATACAT
* * * * *
208050 GATATTGATGCTTTAGTTTCACAAGATATGCTTTCTTCCCACCAATTTGTGTAAATTATGAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * * *
208115 ATTGCTGAATTGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGATTAGGCACTA
66 ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
*
208180 TAAACACATTCTCCTCTTTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
131 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* *
208245 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTTCTTTAAATGAGACATGCATTGATTCTCATAAAA
196 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
*** *
208310 GTCTTTTTTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGA
261 GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTGA
* * * * *
208375 TGCTTTGGTGTCGCAAGA-AAGGCTTTTCTTTCTAACGTTATCGATAAAATCAAAATTTGTCGCT
326 TGCTTTGGTGTCGCAAGAGAA-GCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCT
* * * *
208439 TAAATAAGATAAACTTGAATACTCATACTAAT-CCTATTCTTTTCAGGATTAGGCACCCTAAACA
390 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
* * * *
208503 TAGTCTTCTTATACGGATATAG
455 TAGTCTTCTCATAAGGATACAT
* * * * * *
208525 GATATAGATGATTTGGTTTAGCGAGAAACGCTTTTTTCCCA-CAATTCT-TGTAAATTGTAAGTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATT-TGTGTAAATTATAAGTT
** * * *
208588 TGTGCCTCAAATGAGGCAAACATGGATTCTAGTGAA-GATCTTCATTCATTTCATGATTAGGCAC
65 CATTCCTCAAATGAGACAAACATGGATTCTAGT-AAGGATCTTCATTCATTTCGTGATTAGGCAC
* *
208652 TATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCTTGGAAATCTTTT
129 TATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTT
* * **
208717 CTTTGCCTTATTTTCCTTAAAAGT-AAAGTTTATA-TGTTAAATTAGACATGCATTGATTCTTAT
194 CTTTGCCTTATTTTCCTTAAAA-TCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGT
* * *
208780 AAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAATCCCTGCT-TTAGGATACATGAC
257 AAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT-TTATTAGGATACATGAC
* * * * * * *
208844 ATTGATGCTTTGGTGTCACAAGAGAGGCTTTTCTTTCCATCATTATCGATAAAATCAAAATTTGC
321 ATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGT
*
208909 CTCTTAAATAAGACAAACATGAATACTCATGCTAAT-CCCATTCTTTT-AGGATTAGGCACCATA
386 CTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATA
* * * * * *
208972 ACCAAAGTCTTCTTATACGGATGCAG
451 AACATAGTCTTCTCATAAGGATACAT
* * * * *
208998 GATATTGATGATTTGGTTTCGCAAGAAATGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * *
209062 GTGT-CTCAAATGAGACAAACATGGATTCTGGTAAAGATCTTCATTCATTTCGAGATTAGGCACT
66 AT-TCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT
* *
209126 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTC-TTTGCTTAGAAATCTTTTC
130 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* *
209190 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATTCTCGTCAA
195 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
* * * * * *
209255 AGTCCCCATTC-TTTCGAAGATTAGGATCCAAAAACTCATT-TCTTTCATTAAGATACATGACAT
260 AGTCTCCATTCTTTTC-AAGATTGGGAACCAAAAACACATTCCCTTT-ATTAGGATACATGACAT
* ** * *
209318 TGATGCTTTGGTGTCGCAAGAGAAGCTTTT-TCTTCTACTATTAATGATAAAATCGAAGTTTGTC
323 TGATGCTTTGGTGTCGCAAGAGAAGCTTTTCT-TTCCACCGTTATTGATAAAATCAAAGTTTGTC
209382 TCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAA
387 TCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAA
* * *
209447 ACATAATCTTCTCACAAGGATGCAT
452 ACATAGTCTTCTCATAAGGATACAT
* * * * ** * **
209472 GATATTGATGCTTTGGATTCGCAAGATATGCTTTCTTCCTACCTGTTTGTGTAAAGTATGGGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * *
209537 ATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGATTAGGCA-TG
66 ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT-
* ** * *
209601 ATAAACACATTATGTTC-TATAGGATAAATGATATTGATGGTTTTCTTTTCCATAGAAATCTTTT
130 ATAAACACATTCTCCTCAT-TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTT
** *
209665 CTTCACCTTATTTTCCTTAAAATCAAAGTTTCTACTTTAAATGAGACATGCATTGATTCTCGTAA
194 CTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAA
* * * *
209730 AAGTCTCCATTCTTTTCAAGATTGAGAACCAAATATACATT-CCTTTCATTAGGATACAAGACAT
259 AAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTT-ATTAGGATACATGACAT
* *
209794 TCATGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAG-TTGTCT
323 TGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCT
** *
209858 CTTAAATAAGACTTACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAA
388 CTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAA
* *
209923 CATAGTCTTCTCACAAGGATGCAT
453 CATAGTCTTCTCATAAGGATACAT
* * * * * * * **
209947 GATATTGATGCTTTTGATTCACAAGATACGCTTTCTTCCTACCAGTTTGTGTAAAGTATGGGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * * *
210012 GTTGCTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGATTAGGCGCTA
66 ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * *
210077 TAAGCACATTCTGCTCTTTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
131 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* *
210142 TTGCCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAAA
196 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
* * * *
210207 GTCTTCATTCTTTTCAAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTTA
261 GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTGA
* *
210272 TGCTTTGGTGTCGCAGGAGAGGCTTTTCTTT---CC---------AAAATCAAAGTTTGTCTCTT
326 TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTT
* * * *
210325 AAATAAGACAAGCATGAATACTAATACTAATCCCCATTCTTTTTAGGATTAGGCGCCATAAACAT
391 AAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACAT
*
210390 AATCTTCTCATAAGGATACAT
456 AGTCTTCTCATAAGGATACAT
* *
210411 GATATTGATGCTTTGGTTTCACAA-AATACGCTTTCTTCCCACCAATTTGTGTAAATTATGAGTT
1 GATATTGATGCTTTGGTTTCGCAAGAA-ACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTT
* * * ** *
210475 GATAGCC-CAATTGAGACAAACATGGATTCTTTTAGGGATCTTCATTCATTTCGTGATTAGGCAC
65 CAT-TCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCAC
* * *
210539 TATAAACACATTCTCCTCTTTAAGATAAATGATATTGATGGTTTTCTTTTGCGTGGAAATCTTTT
129 TATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTT
*
210604 CTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTAGTAA
194 CTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAA
* * *
210669 AAGTCTTCATT-TTTGTCAAGATTGGGAACCAAAAACACGTTCCCTTCATTAGGATACATGACAT
259 AAGTCTCCATTCTTT-TCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACAT
* * * * * *
210733 CGATGCTGTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCT
323 TGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCT
* * *
210798 CTTAAATAAGATAAACTTGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCCTAAA
388 CTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAA
* * *
210863 CATAGTCTTCTTATACGGATACAG
453 CATAGTCTTCTCATAAGGATACAT
* * * * * * * * *
210887 GATATTGATGATTTGGTTTCGCGAGAAATGCTTTTTTCCCA-TATTTTTTGTAAATTCTAAGTTT
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * *
210951 ATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCGTTCATTTCATGATTAGGCACTA
66 ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* *
211016 TAAACACATTCTCCTCATTATGATAAATGATATTGATGGTTTTCTTTTGCTTGGAAATCTTTTCT
131 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * * * * *
211081 GTGCCTCATTTTCCTTAAAATCAAAGTTTATACTTAAAAAGAGACAAGCATTGATTCTCGTAAAA
196 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
* * * * *
211146 GTCTCCATTCTTTTCAAGATTAGGAACCAAAAAGACAATCCCTACT-TTAGGATACATGACATTA
261 GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT-TTATTAGGATACATGACATTG
* * * *
211210 ATGCTTTGGTGTCGCAAGAGACA-CTTTTCTTTCCAACGTTATCGATAAAATCAAAATTTATCTC
325 ATGCTTTGGTGTCGCAAGAGA-AGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTC
* *
211274 TTAAATAAGACAAACTTGAATACTCATACTAAT-CCCATTCTTTT-AAGATTAGGCACCATAAAC
389 TTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAAC
* * ** * *
211337 AAAGTCTTCTTATACTGATGCAG
454 ATAGTCTTCTCATAAGGATACAT
* * * * * * * *
211360 GGTATTGATGATTTGGTTTTGCAAGAAATGCTTTTTTCCCA-CAATTTTTGTAAATTCTAAATTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * * * * ** *
211424 GTGCGTAAAATGAGACAAACATGGATTCTGGTCAA-GATATTCATAGATTTCGAGATTAGGCACT
66 ATTCCTCAAATGAGACAAACATGGATTCTAGT-AAGGATCTTCATTCATTTCGTGATTAGGCACT
* *
211488 AT--A-A-A----CC-C---------AATGATATTGATGGTTTTCTTTTGCTTAGAAATCTTTTC
130 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
*
211535 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATTCTCGTAAA
195 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
*
211600 AGTCCCCATTC-TTTCTAAGATTGGGAACCAAAAACACATT-CCTTTCATTAGGATACATGACAT
260 AGTCTCCATTCTTTTC-AAGATTGGGAACCAAAAACACATTCCCTTT-ATTAGGATACATGACAT
* * *
211663 TGATGCTTTGGTGTCGCAGGAGAAGCTTTTCTTTCCATCGTTATTGATAGAATCAAAG-TTGTCT
323 TGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCT
211727 CTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAA
388 CTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAA
*
211792 CATAGTCTTCTCATAAGGATGCAT
453 CATAGTCTTCTCATAAGGATACAT
* * ** * *** * * *
211816 GATATTGATGCTTTGGATTCACAAGTTACGCTTTCTTCCAACTTGTTTATGTAAAGTATGAGTTC
1 GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
* * * *
211881 TTTGCTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGATTAGGCACTA
66 ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
* * ** ** *
211946 TAAACACATTATGCTTTTTAGGATAAATGATATTGGCGGTTTTCTTTTGCATGGAAATCATTTCT
131 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * * *
212011 TTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACACGTACTGATTCTCGTAAAA
196 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
* * ** * *
212076 GTCTACATTCTTTTCAAGATTGGGAACTAAAAAATCACATTTTCTTCATTAGGATGCATGACATT
261 GTCTCCATTCTTTTCAAGATTGGGAAC-CAAAAA-CACATTCCCTTTATTAGGATACATGACATT
* * *
212141 GATGCTTTGGTGTCGCAAGAGAAACTGTTCTTTCCACCATTATT
324 GATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATT
212185 TATAGATTAG
Statistics
Matches: 7405, Mismatches: 863, Indels: 257
0.87 0.10 0.03
Matches are distributed among these distances:
453 1 0.00
454 46 0.01
455 204 0.03
456 68 0.01
457 68 0.01
459 1 0.00
460 1 0.00
461 1 0.00
463 14 0.00
464 409 0.06
465 135 0.02
466 154 0.02
467 111 0.01
468 5 0.00
469 337 0.05
470 83 0.01
471 15 0.00
472 211 0.03
473 461 0.06
474 554 0.07
475 2727 0.37
476 1416 0.19
477 380 0.05
478 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (476 bp):
GATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTGTGTAAATTATAAGTTC
ATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGATACATGACATTGA
TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTT
AAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACAT
AGTCTTCTCATAAGGATACAT
Found at i:208442 original size:159 final size:158
Alignment explanation
Indices: 203522--211337 Score: 1266
Period size: 159 Copynumber: 49.5 Consensus size: 158
203512 TCATTTTCCT
* * * * *
203522 TAAAATCAAAGTTTGTACTTTAAATGAGGCAAGCATTGATTCTCGTAAAAGTCTCCATTC-ATTC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* * * ** * * *
203586 TAATATTGGGAA-CAAGAACACATTCCCTTTGTTAGGATGCATGACATTGATACTTTGGGGTCAC
65 -AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCAC
* * *
203650 AAGAGAA-GCTTTTCTTTCCACCATTATTGA
129 AAGA-AAGGCTTTTCTTTCCAACGTTATCGA
* * * * * * * ** *
203680 TAGAATCAAAGTTTGTCTCTCAAATAAGAAAAACA-TGAATACACA-AACTAA-TCCACATTCTA
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCATAA--AAGTCTTCATTCTT
* * * * * * * * * *
203742 TTCTAGATTAGGCACCATAAACATAGT-CATCTAATAAGGATACATGATATTGATGCTTTGGTTT
62 TTCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGT
** * * * * *
203806 CACAAGAAACAC-TTTCTTCCCACCAATTTTTG-
126 CACAAGAAAGGCTTTTCTTTCCAAC-GTTATCGA
* * * * ** *
203838 TAAATTCTAAGTTTGTGCCTCAAATGAGACAAGCATGGATTC-CAGT-ACGGATCTTCATTCATT
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCA-TAAAAG-TCTTCATTCTTT
* * * * ** *
203901 TCATGATTAGGAA-CAACAAACACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTTCTTT
63 TCAAGATTAGGAACCAA-AAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGT
** ** ** * * * *
203964 TGCTTGAAAATCTTTTCCTTGCCTTA--TTTTCCA
126 CACAAGAAAGGCTTTT-CTTTCC-AACGTTATCGA
* * * *
203997 TAACATCAAAGTTTGTACTTTAAATGAGACACGCATTGATTCTCGTAAAAGTC-TCTATTC-TTT
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTC-ATTCTTTT
* * * *
204060 -----TTAGGAACGAAATACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
64 CAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCAC
* *
204120 AAGAGAA-GCTTTTCTTTCCACCGTTATTGA
129 AAGA-AAGGCTTTTCTTTCCAACGTTATCGA
* * * * ** **
204150 TAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAATACTCATGCTAA-TCCCCATTCTTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCAT-AAAAGTCTTCATTCTTT
* * * * * * * * *
204212 TCAGGATTAGGCACCATAAACATAGT-CTTCTCATAAGGATGCATGATATTGATGCTTTGGAT-T
63 TCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGG-TGT
* * * *
204275 CACAAGATACGC-TTTCTTCCATCCAA-TTTGT-G-
126 CACAAGAAAGGCTTTTCTT---TCCAACGTTATCGA
* * * ** **
204307 TAAAGTATC--AGTTCAT-TACTCAAATGAGACAAAC-TTGGATTCTTGT-AGGGATCTTCATTC
1 TAAA--ATCAAAGTT--TGTCCTTAAATGAGACAAGCATT-GATTCTCATAAAAG-TCTTCATTC
* * * * * * * * ** * **
204367 ATTTCATGATTAGGCACTATAAACACATTCTGC-TCTTTAGGATAAATGATTTTGATGGTTTTCT
60 TTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGT
* ** * ** * * **
204431 TTTGCATGAAAATCTTTTCTTTGCCTTA--TTTTCCT
124 GTCACAAGAAAGGCTTTTCTTT-CC-AACGTTATCGA
* * * * ** *
204466 TAAAATCAAAGTTTGTACTTTATATGAGACATGCATTGATTCTCGTAAAAGTCCCCTTTCTTTTC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* ** * *
204531 AAGATTAGGATCCAAAAACTTATTTCCTTCATTAGGATACATGACATTAATGCTTTGGTGTCACA
65 AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
* * *
204596 AGAGAA-GCTTGTCTTTCC-GCTGTTATTGA
130 AGA-AAGGCTTTTCTTTCCAAC-GTTATCGA
* * * * * * * ** * *
204625 TAGAATCAAGGTTTGTCTTTTAAATAAGACAAACA-TGAATACTCATACTAA-TCCCCTTTCTTG
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCATA-AAAGTCTTCATTCTTT
* * * * * * * * *
204688 TCAGGATTAGGCACCATAAACATAGTAT-TC-TCATAAGGATACATGATATTAATGCTTTGGTTT
63 TCAAGATTAGGAACCAAAAACACA-T-TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGT
* * * * * *
204751 CGCAAGATACGC-TTTC-TTCCCAC-CTATTCTTA
126 CACAAGAAAGGCTTTTCTTTCCAACGTTA-TC-GA
* * * * * *
204783 TAAAGA--ATAAGTTCAT-TCCTCAAATTAGAGAAACATAGATTCT-AGT-AAGGATCTTCATTC
1 TAAA-ATCA-AAGTT--TGTCCTTAAATGAGACAAGCATTGATTCTCA-TAAAAG-TCTTCATTC
*** * * * * * * *
204843 ATTTT-GTCATTAGGCACTATAAACACATT-CTTCTCATTAGGATTA-ATGATATTGATGGTTTT
60 -TTTTCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGA-TACATGACATTGATGCTTTG
* * ** * * * * * **
204905 CTTTTGCATGGAAA-TCTTTTCTTTGCC-TCATTTTCCT
122 GTGTCACA-AGAAAGGCTTTTCTTT-CCAACGTTATCGA
* * * *
204942 TAAAATCAAAGTTTATACTTTAAATGAGGCAAGCATTGATTCTCATAAAAGTCTCCATTC-TTTC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* * * ** * *
205006 TAATATTGGGAA-CAAGAACACATTCCCTTTGTTAGGATGCATGACATTGATACTTTGGTGTCAC
65 -AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCAC
* * * *
205070 AAGAGAA-GTTTTTCTTTCCACCATTATTGA
129 AAGA-AAGGCTTTTCTTTCCAACGTTATCGA
* * * * * ** * * ** *
205100 TAGAATCAAAGTTTGTCCCTCAAATAAGAAAAACA-TGAAAACACATACTAA-TCCACATTCTAT
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTG-ATTCTCATA-AAAGTCTTCATTCTTT
* * * * * * * * * * *
205163 ACTAGATTAGGCACCATAAACATAGT-CATCTAATAAGGATACATGATATTGATGCTTTGGTTTC
63 TCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGTC
* ** * * * * *
205227 GCAAGAAACAC-TTTCTTCCCACCAATTTTTG-
127 ACAAGAAAGGCTTTTCTTTCCAAC-GTTATCGA
* * * * * * * *
205258 TAAATTCTAAGTTTGTGCCTCAAATGAGACAAGCGTGGATTC-CAGT-AAGGATCATCATTCATT
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCA-TAAAAG-TCTTCATTCTTT
* * * * * * * ** * *
205321 TCATGATTAGGAACTATAAACATATTCTCC-TCATTAGGATAAATGATATTGATGGTTTTCTTTT
63 TCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * ** * * *** * **
205385 GCATGAAAATCTTTTCCTTACATTATTTTCCT
127 ACAAGAAAGGCTTTTCTTTCCAACGTTATCGA
* * * * *
205417 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCACTCTTTTC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* * * * *
205482 AAGATTGGGAACTAAAAACACATTCCTTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGCA
65 AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
*
205547 AGAGAA-GCTTTTCTTTCCACCGTTATCGA
130 AGA-AAGGCTTTTCTTTCCAACGTTATCGA
* * * * * **
205576 TAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAATACTCATACTAA-TCCCCATTCTTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCATA-AAAGTCTTCATTCTTT
* * * * * * * * *
205638 TCAGGATTAGGCACCATAAACATAGT-CTTCTCATAAGGATGCATGATATTGATGCTTTGGAT-T
63 TCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGG-TGT
* * ** * *
205701 CACAAGATACGCTGTCTTCTAACCAA-TTTGT-G-
126 CACAAGAAAGGCT-T-TTCTTTCCAACGTTATCGA
* * * * * * * ** *
205733 TAAAGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGATTCTTAT-AGGGATCTTCATTCAT
1 TAAAATCA-AAGTT--TGTCCTTAAATGAGACAAGCATTGATTCTCATAAAAG-TCTTCATTCTT
** * * * * * * * * ** *
205795 TTCGTGATTAGGCACTATAAACAAATTCTCCTT-TTTAGGATAAATGATATTGATGGTTTTCTTT
62 TTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGT
** * * * * **
205859 TGCATGGAAA-TCTTTTCTTTGCCTTA--TTTTCCT
126 CACA-AGAAAGGCTTTTCTTT-CC-AACGTTATCGA
* * * *
205892 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* * *
205957 AAGTTTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
65 AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
** * *
206022 A-AAGAGGCTTTTCTTTCCCCCTTTTTCGA
130 AGAA-AGGCTTTTCTTTCCAACGTTATCGA
* * * * ** * ** *
206051 TAAAATCAAAATTTGTCTCTTAAATAAGATAAACA-TGAATAGTCATACTAA-TCCCCATTTTTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCATA-AAAGTCTTCA-TTCTT
* * * * * * *
206114 TTCAGGATTAGGCACCATAAACATAGT-CTTCTCA-TAGGGATACATGATATTGATGCTTTGGAT
62 TTCAAGATTAGGAACCAAAAACACATTCCCT-TCATTA-GGATACATGACATTGATGCTTTGG-T
* * ** * *
206177 -TCACAAGATACGCTGTCTTCTAACCAA-TTTGT-G-
124 GTCACAAGAAAGGCT-T-TTCTTTCCAACGTTATCGA
* * * * * * ** ** *
206210 TAAAGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGATTCTTGT-AGGGATTTTCATT-TA
1 TAAAATCA-AAGTT--TGTCCTTAAATGAGACAAGCATTGATTCTCATAAAAG-TCTTCATTCT-
* * * * * * * * * ** *
206271 TTTCATGATTAGGCACTATAAACACATTCTGC-TCTTTAGGATAAATGATATTGATGGTTTTCTT
61 TTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTG
** * * * * **
206335 TTGCATCGAAA-TCTTTTCTTTGCCTTA--TTTTCCT
125 TCACA-AGAAAGGCTTTTCTTT-CC-AACGTTATCGA
* * * * * * *
206369 TAAAATCAATGTTTGTACTTTATATGAGACAGGCATTGATTCTCGTAAAAGTATCCATT-TTTTC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* * * * *
206433 AGGATTGGGAACCAAAAACACGTTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGCCGCA
65 AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
*
206498 A-AAGAAGCTTTTCTTTCCAACGTTATCGA
130 AGAA-AGGCTTTTCTTTCCAACGTTATCGA
* * * * * * * *
206527 TAAAATCAAAATTTATCTCTTAAAT-ATGATAAAC-TTGAATACTCTTACTAA-TC-CCATTCTT
1 TAAAATCAAAGTTTGTC-CTTAAATGA-GACAAGCATTG-ATTCTCATA-AAAGTCTTCATTCTT
* * * * * * * * * * * *
206588 TTCAGGATTAGGCACCATAAACATAGT--CTTCTTATACAGATATAGGATATTGATGATTTGGTT
62 TTCAAGATTAGGAACCAAAAACACATTCCCTTCAT-TA-GGATACATGACATTGATGCTTTGGTG
** * * * * *
206651 TCAGGAGAAACGC-TTT-TTTCCCACAATTTTTG-
125 TCACAAGAAAGGCTTTTCTTTCCAAC-GTTATCGA
* * * * ** * *
206683 TAAATTCTAAGTTTGTGCCTCAAATGAGACAAACAAGGATTCT-AGT-AAAGATATTCGTT-TAT
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCA-TAAAAG-TCTTCATTCT-T
* * * * * * *
206745 TTCATGATTAGGCACTATAAACACATTCTCC-TCATTAGGATAAATGATATTGAT--TTTGCT-T
62 TTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGT
** * * **
206806 -----GAAAATCTTTTCTTTGCCTTA--TTTTCCT
126 CACAAGAAAGGCTTTTCTTT-CC-AACGTTATCGA
* * * * * * ** *
206834 TAAAATCAAAGTTTATACTTTAAATGAGACATGCATTGATCCTCTTCAAAGTCCCCATTCTTTCC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* * * * * *
206899 AAGATTTGGATCCAAAAACTCATTTCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTCGCA
65 AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
* *
206964 AGAGAA-GCTTTT-TTT-CTACTATTAAT-GA
130 AGA-AAGGCTTTTCTTTCCAAC-GTT-ATCGA
* * * * * **
206992 CAAAATCGAAGTTTGTCTCTTAAATAAGACATA-CA-TGAATACTCATACTAA-TCCCCATTCTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACA-AGCATTG-ATTCTCATA-AAAGTCTTCATTCTT
* * * * * * *** *
207054 TTCAGGATTAGGCACCATAAACATAGTAT-TCTT-ATAAGGATACATGATGGTGATGCTTTGGTT
62 TTCAAGATTAGGAACCAAAAACACA-T-TCCCTTCATTAGGATACATGACATTGATGCTTTGGTG
* ** * * * ***
207117 TCGCAAGAAACAC-TTTCTTCCCACCAATT-TTTT
125 TCACAAGAAAGGCTTTTCTTTCCAAC-GTTATCGA
* * * * * * * *
207150 TAAATTCTAAGTTCCTG-CCTCAAATGAGACAAACATGGATT-TTAGT-AAGGATCTTCATTCAT
1 TAAAATCAAAGTT--TGTCCTTAAATGAGACAAGCATTGATTCTCA-TAAAAG-TCTTCATTCTT
** * * ** * * * * * ** *
207212 TTCGTGATAAGGAACTATTAGCATATTCTCC-TCATTAGGATAAATGATATTGATGGTTTTCTTT
62 TTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGAT-GCTTTGGTG
* * * * **
207276 TC-CATGGAAA-TCTTTTCTTTGCCTTA--TTTTCCT
125 TCACA-AGAAAGGCTTTTCTTT-CC-AACGTTATCGA
* * * * *
207309 TAAAATCAAAGCTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* *
207374 AAGATT-GAGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
65 AAGATTAG-GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCAC
* *
207438 AAGAGAA-GTTTTTCTTTCC-ACTGTTATTGA
129 AAGA-AAGGCTTTTCTTTCCAAC-GTTATCGA
* * * * * **
207468 TAAAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAATACTCCTACTAA-TCCCCATTCTTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCATA-AAAGTCTTCATTCTTT
* * * * * * ** * *
207530 TCAGGATTAGGCACCATAAACATAGT-CTTCTCACAAGGATGCATGATATTGATGCTTTGGAT-T
63 TCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGG-TGT
* * * ** *
207593 CGCAAGATATGC-TTTC-TTCCTGCCTGTT-T-GTG
126 CACAAGAAAGGCTTTTCTTTCC-AAC-GTTATCG-A
* ** * ** * * ** ** *
207625 TAAAGT-ATGGGTTCAT-TGCACAAATGAGACAAACATGGATTCTTGT-AGGGATCTTCATTCAT
1 TAAAATCA-AAGTT--TGTCCTTAAATGAGACAAGCATTGATTCTCATAAAAG-TCTTCATTCTT
** * * * ** * * * * ** *
207687 TTCGTGATTAGGCACTATAAACACATTCTGTTC-TATAAGATAAATGATATTGATGGTTTTCTTT
62 TTCAAGATTAGGAACCAAAAACACATTCCCTTCAT-TAGGATACATGACATTGATGCTTTGGTGT
** * * * * * *
207751 TGCATGGAAA-TCTTTTCTTTGCCTTA-TTTTTC-T
126 CACA-AGAAAGGCTTTTCTTT-CC-AACGTTATCGA
* * * * *
207784 TAAAATCAAAGTTTGTACTTTAATTGAGACATGCATTGATTGTCATAAAAGTCTTCGTTCTTTTC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
*
207849 AAGATTAGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
65 AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
* * *
207914 AGAGAGGCTTTTCTTTCCAACGGTATTGA
130 AGAAAGGCTTTTCTTTCCAACGTTATCGA
* * * **
207943 TAAAATCAAAGTTTGTCTCTTAAATAAGACAAGCA-TGAATACTCATACTAA-TCCCCATTCTTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCATA-AAAGTCTTCATTCTTT
* * ** * * * * * * * *
208006 TTAGGATTAGGTGCCATAAACATAAT-CTTCTCATAAGGATACATGATATTGATGCTTTAGTTTC
63 TCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * * *
208070 ACAAGATATGC-TTTCTTCCCACCAATT-T-G-
127 ACAAGAAAGGCTTTTCTTTCCAAC-GTTATCGA
* * * * * * * * ** ** *
208099 TGTAAATTATGAGTTCAT-TGCTGAATTGAGACAAACATGGATTCTTGT-AGGGATCTTCATTCA
1 T-AAAATCA-AAGTT--TGTCCTTAAATGAGACAAGCATTGATTCTCATAAAAG-TCTTCATTCT
** * * * * * * * ** *
208162 TTTCGTGATTAGGCACTATAAACACATTCTCC-TCTTTAGGATAAATGATATTGATGGTTTTCTT
61 TTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTG
** * * * * **
208226 TTGCATGGAAA-TCTTTTCTTTGCCTTA--TTTTCCT
125 TCACA-AGAAAGGCTTTTCTTT-CC-AACGTTATCGA
* * **
208260 TAAAATCAAAGTTTGTTCTTTAAATGAGACATGCATTGATTCTCATAAAAGTCTTTTTTCTTTTC
1 TAAAATCAAAGTTTG-TCCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* *
208325 AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
65 AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
*
208390 AGAAAGGCTTTTCTTTCTAACGTTATCGA
130 AGAAAGGCTTTTCTTTCCAACGTTATCGA
* * * * * * *
208419 TAAAATCAAAATTTGTCGCTTAAATAAGATAAAC-TTGAATACTCATACTAA-TCCT-ATTCTTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCATA-AAAGTCTTCATTCTTT
* * ** * * * * * * * *
208481 TCAGGATTAGGCACCCTAAACATAGT--CTTCTTATACGGATATAGGATATAGATGATTTGGT-T
63 TCAAGATTAGGAACCAAAAACACATTCCCTTCAT-TA-GGATACATGACATTGATGCTTTGGTGT
* * * * * * *
208543 TAGCGAGAAACGC-TTT-TTTCCCACAATTCTTG-
126 CA-CAAGAAAGGCTTTTCTTTCCAAC-GTTATCGA
* ** * * * * * *
208575 TAAATTGTAAGTTTGTGCCTCAAATGAGGCAAACATGGATTCT-AGT-GAAGATCTTCATTCATT
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCA-TAAAAG-TCTTCATTCTTT
* * * * * * * ** * *
208638 TCATGATTAGGCACTATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGATTTTCTTTT
63 TCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* ** * * * **
208702 GCTTGGAAA-TCTTTTCTTTGCCTTA--TTTTCCT
127 AC-AAGAAAGGCTTTTCTTT-CC-AACGTTATCGA
* ** * * * *
208734 TAAAAGT-AAAGTTTATATGTTAAATTAGACATGCATTGATTCTTATAAAAGTCTCCATTCTTTT
1 TAAAA-TCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTT
* * *
208798 CAAGATTAGGAACCAAAAACACAATCCCTGCTTTAGGATACATGACATTGATGCTTTGGTGTCAC
64 CAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCAC
* * *
208863 AAGAGAGGCTTTTCTTTCCATCATTATCGA
129 AAGAAAGGCTTTTCTTTCCAACGTTATCGA
* * * * * ** *
208893 TAAAATCAAAATTTGCCTCTTAAATAAGACAAACA-TGAATACTCATGCTAA-TC-CCATTCTTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCAT-AAAAGTCTTCATTCTTT
* * * * * * * * * * * *
208955 T-AGGATTAGGCACCATAACCAAAGT--CTTCTTATACGGATGCAGGATATTGATGATTTGGTTT
63 TCAAGATTAGGAACCAAAAACACATTCCCTTCAT-TA-GGATACATGACATTGATGCTTTGGTGT
* * * * * *
209017 CGCAAGAAATGC-TTT-TTTCCCACAATTTTTG-
126 CACAAGAAAGGCTTTTCTTTCCAAC-GTTATCGA
* * * * * ** *
209048 TAAATTCTAAGTTCGTGT-CTCAAATGAGACAAACATGGATTCTGGT-AAAGATCTTCATTCATT
1 TAAAATCAAAGTT--TGTCCTTAAATGAGACAAGCATTGATTCTCATAAAAG-TCTTCATTCTTT
* * * * * * * ** *
209111 TCGAGATTAGGCACTATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTTCTTTG
63 TCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGT-
** * * * **
209175 C-TTAGAAA-TCTTTTCTTTGCCTTA--TTTTCCT
126 CACAAGAAAGGCTTTTCTTT-CC-AACGTTATCGA
* * * * * **
209206 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATTCTCGTCAAAGTCCCCATTC-TTTC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* * * * * *
209270 GAAGATTAGGATCCAAAAACTCATTTCTTTCATTAAGATACATGACATTGATGCTTTGGTGTCGC
65 -AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCAC
* *
209335 AAGAGAA-GCTTTT-TCTT-CTACTATTAAT-GA
129 AAGA-AAGGCTTTTCT-TTCCAAC-GTT-ATCGA
* * * * * **
209365 TAAAATCGAAGTTTGTCTCTTAAATAAGACAAACA-TGAATACTCATACTAA-TCCCCATTCTTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCATA-AAAGTCTTCATTCTTT
* * * * * * ** * *
209428 TCAGGATTAGGCACCATAAACATAAT-CTTCTCACAAGGATGCATGATATTGATGCTTTGGAT-T
63 TCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGG-TGT
* * * * *
209491 CGCAAGATATGC-TTTC-TTCCTACCTGTT-T-GTG
126 CACAAGAAAGGCTTTTCTTTCC-AAC-GTTATCG-A
* ** * * * * ** ** *
209523 TAAAGT-ATGGGTTCAT-TGCTCAAATGAGACAAACATGGATTCTTGT-AGGGATCTTCATTCAT
1 TAAAATCA-AAGTT--TGTCCTTAAATGAGACAAGCATTGATTCTCATAAAAG-TCTTCATTCTT
** * ** * *** * * * ** *
209585 TTCGTGATTAGGCATGATAAACACATTATGTTC-TATAGGATAAATGATATTGATGGTTTTCTTT
62 TTCAAGATTAGGAACCAAAAACACATTCCCTTCAT-TAGGATACATGACATTGAT-GCTTTGGTG
* * **
209649 TC-CATAGAAA-TCTTTTC-TT-C-ACCTTATTTTCCT
125 TCACA-AGAAAGGCTTTTCTTTCCAACGTTA---TCGA
* * * * *
209682 TAAAATCAAAGTTTCTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* * * * * **
209747 AAGATT-GAGAACCAAATATACATTCCTTTCATTAGGATACAAGACATTCATGCTTTGGTGTCGT
65 AAGATTAG-GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCAC
* *
209811 AAGAGAA-GCTTTTCTTTCCACCGTTATTGA
129 AAGA-AAGGCTTTTCTTTCCAACGTTATCGA
* * * * **
209841 TAAAATCAAAG-TTGTCTCTTAAATAAGACTTA-CA-TGAATACTCATACTAA-TCCCCATTCTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGAC-AAGCATTG-ATTCTCATA-AAAGTCTTCATTCTT
* * * * * * * ** * * *
209902 TTTAGGATTAGGCACCATAAACATAGT-CTTCTCACAAGGATGCATGATATTGATGCTTTTGAT-
62 TTCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGC-TTTGGTG
* * * *
209965 TCACAAGATACGC-TTTC-TTCCTACCAGTT-T-GTG
125 TCACAAGAAAGGCTTTTCTTTCC-AAC-GTTATCG-A
* ** * * * * * ** ** *
209998 TAAAGT-ATGGGTTCGTTGCTCAAATGAGACAAACATGGATTCTTGT-AGGGATCTTCATTCATT
1 TAAAATCA-AAGTTTG-TCCTTAAATGAGACAAGCATTGATTCTCATAAAAG-TCTTCATTCTTT
** ** * * * * * * * * ** * *
210061 TCGTGATTAGGCGCTATAAGCACATTCTGC-TCTTTAGGATAAATGATATTGATGGTTTTCTTTT
63 TCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * * * * *
210125 GCATGGAAA-TCTTTTCTTTGCCTTA-TTTTTC-T
127 ACA-AGAAAGGCTTTTCTTT-CC-AACGTTATCGA
* *
210157 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* * * *
210222 AAGATTGGGAACCAAAAACACATTTCCTTCATTAGGATACATGACATTTATGCTTTGGTGTCGCA
65 AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
* *
210287 GGAGAGGCTTTTCTTT----C-----C--
130 AGAAAGGCTTTTCTTTCCAACGTTATCGA
* * * * **
210305 -AAAATCAAAGTTTGTCTCTTAAATAAGACAAGCA-TGAATACTAATACTAA-TCCCCATTCTTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCATA-AAAGTCTTCATTCTTT
* * ** * * * * * * *
210367 TTAGGATTAGGCGCCATAAACATAAT-CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTC
63 TCAAGATTAGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * *
210431 ACAA-AATACGC-TTTCTTCCCACCAATT-T-G-
127 ACAAGAA-AGGCTTTTCTTTCCAAC-GTTATCGA
* * * * * * * * * **
210460 TGTAAATTATGAG-TTGATAGCC-CAATTGAGACAAACATGGATTCT-TTTAGGGATCTTCATTC
1 T-AAAATCA-AAGTTTG-T--CCTTAAATGAGACAAGCATTGATTCTCATAAAAG-TCTTCATTC
* ** * * * * * * * * **
210522 ATTTCGTGATTAGGCACTATAAACACATTCTCC-TCTTTAAGATAAATGATATTGATGGTTTTCT
60 TTTTCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGT
* ** ** * * * **
210586 TTTGCGTGGAAA-TCTTTTCTTTGCCTTA--TTTTCCT
124 GTCAC-AAGAAAGGCTTTTCTTT-CC-AACGTTATCGA
* *
210621 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCT-AGTAAAAGTCTTCATT-TTTG
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCA-TAAAAGTCTTCATTCTTT-
* * * * *
210684 TCAAGATTGGGAACCAAAAACACGTTCCCTTCATTAGGATACATGACATCGATGCTGTGGTGTCG
63 TCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCA
*
210749 CAAGAGAGGCTTTTCTTTCCAACGTTATCGA
128 CAAGAAAGGCTTTTCTTTCCAACGTTATCGA
* * * * * * **
210780 TAAAATCAAAATTTGTCTCTTAAATAAGATAAAC-TTGAATACTCATACTAA-TCCCCATTCTTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCATA-AAAGTCTTCATTCTTT
* * ** * * * * * * *
210843 TCAGGATTAGGCACCCTAAACATAGT--CTTCTTATACGGATACAGGATATTGATGATTTGGTTT
63 TCAAGATTAGGAACCAAAAACACATTCCCTTCAT-TA-GGATACATGACATTGATGCTTTGGTGT
* * * * * * *
210906 CGCGAGAAATGCTTTT-TTCCCATA-TTTTTTG-
126 CACAAGAAAGGCTTTTCTTTCCA-ACGTTATCGA
* * * * * * * *
210937 TAAATTCTAAGTTTATGCCTCAAATGAGACAAACATGGATTCT-AGT-AAAGATCTTCGTTCATT
1 TAAAATCAAAGTTTGT-CCTTAAATGAGACAAGCATTGATTCTCA-TAAAAG-TCTTCATTCTTT
* * * * * * * * ** * *
211000 TCATGATTAGGCACTATAAACACATTCTCC-TCATTATGATAAATGATATTGATGGTTTTCTTTT
63 TCAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* ** * * * * * **
211064 GCTTGGAAA-TCTTTTCTGTGCC-TCATTTTCCT
127 AC-AAGAAAGGCTTTTCT-TTCCAACGTTATCGA
* * * * *
211096 TAAAATCAAAGTTTATACTTAAAAAGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
1 TAAAATCAAAGTTTGTCCTT-AAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTC
* * * * * *
211161 AAGATTAGGAACCAAAAAGACAATCCCTACTTTAGGATACATGACATTAATGCTTTGGTGTCGCA
65 AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
* **
211226 AGAGACACTTTTCTTTCCAACGTTATCGA
130 AGAAAGGCTTTTCTTTCCAACGTTATCGA
* * * * * * *
211255 TAAAATCAAAATTTATCTCTTAAATAAGACAAAC-TTGAATACTCATACTAA-TC-CCATTCTTT
1 TAAAATCAAAGTTTGTC-CTTAAATGAGACAAGCATTG-ATTCTCATA-AAAGTCTTCATTCTTT
* *
211317 T-AAGATTAGGCACCATAAACA
63 TCAAGATTAGGAACCAAAAACA
211338 AAGTCTTCTT
Statistics
Matches: 5443, Mismatches: 1667, Indels: 1097
0.66 0.20 0.13
Matches are distributed among these distances:
146 12 0.00
147 99 0.02
148 2 0.00
149 6 0.00
150 10 0.00
151 83 0.02
152 42 0.01
153 79 0.01
154 10 0.00
155 55 0.01
156 148 0.03
157 520 0.10
158 2022 0.37
159 2100 0.39
160 223 0.04
161 22 0.00
162 10 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (158 bp):
TAAAATCAAAGTTTGTCCTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTTCATTCTTTTCA
AGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAA
GAAAGGCTTTTCTTTCCAACGTTATCGA
Found at i:211397 original size:159 final size:158
Alignment explanation
Indices: 210759--211397 Score: 394
Period size: 157 Copynumber: 4.0 Consensus size: 158
210749 CAAGAGAGGC
* *
210759 TTTTCTTTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAAATAAGATAAACTTGAATACTC
1 TTTTCTTTCCAACGTTATCGATAAAATCAAAATTTATCTCTTAAATAAGACAAACTTGAATACTC
* * * * *
210824 ATACTAATCCCCATTCTTTTCAGGATTAGGCACCCTAAACATAGTCTTCTTATACGGATACAGGA
66 ATA-AAATCTCCATTCTTTTCAAGATTAGGCACCATAAACAAAGTCTTCTTATA-GGATACAGGA
*
210889 TATTGATGATTTGGTTTCGCGAGAAATGCTT
129 TATTGATGATTTGGTTTCGCAAGAAAT-CTT
* * * * * * * * * * *
210920 TTTTC---CCATA-TTTTTTG-TAAATTCTAAGTTTATGC-CTCAAATGAGACAAACATGGATTC
1 TTTTCTTTCCA-ACGTTATCGATAAAATCAAAATTTAT-CTCTTAAATAAGACAAACTTGAATAC
* * * * * * * * * * *
210979 T-AGTAAAGATCTTCGTTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTATGATAAA
64 TCA-TAAA-ATCTCCATTCTTTTCAAGATTAGGCACCATAAACAAAGTCTTCTTA-TAGGATACA
* * ** * **
211043 TGATATTGATGGTTTTCTTTTGCTTGGAAATC--
126 GGATATTGATGATTTGGTTTCGC-AAGAAATCTT
* * * * ** * * * * *
211075 TTTTCTGTGCC-TCATTTTCCTTAAAATCAAAGTTTAT-ACTTAAAAAGAGACAAGCATTG-ATT
1 TTTTCT-TTCCAACGTTATCGATAAAATCAAAATTTATCTCTTAAATA-AGACAAAC-TTGAATA
* * * * *
211137 CTCGTAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAAGACAA-TCCCTACTT-TAGGATA
63 CTCATAAAA-TCTCCATTCTTTTCAAGATTAGGCACCATAAACA-AAGT--CTTCTTATAGGATA
* * * * * * **
211200 CATGACATTAATGCTTTGGTGTCGCAAGAGA-CAC
124 CAGGATATTGATGATTTGGTTTCGCAAGAAATCTT
211234 TTTTCTTTCCAACGTTATCGATAAAATCAAAATTTATCTCTTAAATAAGACAAACTTGAATACTC
1 TTTTCTTTCCAACGTTATCGATAAAATCAAAATTTATCTCTTAAATAAGACAAACTTGAATACTC
* * * *
211299 ATACTAATC-CCATTCTTTT-AAGATTAGGCACCATAAACAAAGTCTTCTTATACTGATGCAGGG
66 ATA-AAATCTCCATTCTTTTCAAGATTAGGCACCATAAACAAAGTCTTCTTATA-GGATACAGGA
*
211362 TATTGATGATTTGGTTTTGCAAGAAATGCTT
129 TATTGATGATTTGGTTTCGCAAGAAAT-CTT
211393 TTTTC
1 TTTTC
211398 CCACAATTTT
Statistics
Matches: 349, Mismatches: 98, Indels: 64
0.68 0.19 0.13
Matches are distributed among these distances:
155 10 0.03
156 6 0.02
157 137 0.39
158 44 0.13
159 131 0.38
160 12 0.03
161 9 0.03
ACGTcount: A:0.32, C:0.18, G:0.13, T:0.37
Consensus pattern (158 bp):
TTTTCTTTCCAACGTTATCGATAAAATCAAAATTTATCTCTTAAATAAGACAAACTTGAATACTC
ATAAAATCTCCATTCTTTTCAAGATTAGGCACCATAAACAAAGTCTTCTTATAGGATACAGGATA
TTGATGATTTGGTTTCGCAAGAAATCTT
Found at i:213082 original size:475 final size:475
Alignment explanation
Indices: 212188--217053 Score: 3930
Period size: 475 Copynumber: 10.0 Consensus size: 475
212178 CATTATTTAT
* * * ***
212188 AGATTAGGCACTAGAAACATAGTCTTCTCATAAGGATACATGATATTGATTCTTTGGTTTCGTGG
1 AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * **
212253 GAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAATTCATTTCTCAAATGAGACAAACATGG
66 GAAACGCTTT-TTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
212318 ATTCTAGTAAGGATCTTTATTCATTTCATGATTAGGCACCATAAACGCATTCTCCT-GTTAGGAT
130 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
212382 AAATGATATTGATGGTTTTCTTTTACTTGGAAATCTTTTATTTGCCTAACTTTCCTTAAAATCAA
195 AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTATTTGCCTTATTTTCCTTAAAATCAA
* * * *
212447 TGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTTTCTATT-TTTTCCAAGATTGG
260 AGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT-CAAGATTGG
212511 GAACCAAAAACAC-TTTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
324 GAACCAAAAACACATTTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * * *
212575 CTAT-TCTTTCCACCGTCAATGATAAAATCAAAGTCTATCTCTTAAATAAGATAAACATGAATAC
389 CT-TGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAC
212639 TCATACTAATACCCATTCTTTTCA
453 TCATACTAAT-CCCATTCTTTTCA
* * * * * *
212663 AGACTAGGCACCATAAACATAGTCTTCTTATACGGATACAGGGTATTGATGATTTGGTTTCGCAA
1 AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
*
212728 GAAACGCTTTTTACCCA-TAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
66 GAAACGCTTTTT-CCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* *
212792 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAAGCACTATAAACATATTCTCCTCATTAGGAT
130 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
212857 AAATGATTTTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAA
195 AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTATTTGCCTTATTTTCCTTAAAATCAA
* * *
212922 AGTTCGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCATTCTTTTCAAGATTAGG
260 AGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGG
* *
212987 ATCCAAAAACTCATTTC-CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
325 AACCAAAAACACATTTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* *
213051 TTGTCTTTCCACTGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACGTGAATACTC
390 TTGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
*
213116 ATACTAATCCCCTTTCTTTTCA
455 ATACTAAT-CCCATTCTTTTCA
* * * *
213138 GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACAAGATATTAACGCTTTGGTTTCGCAA
1 AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * * * * *
213203 GATACGCTTTCTTCCCACCTATTCTTGTAAAGTATAAGTTCATTCCTCAAATTAGACAAACATGG
66 GAAACGCTTT-TTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* *
213268 ATTCTAGTAAGGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCGTTAGGAT
130 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
213333 TAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCATTTTCCTTAAAATCAA
195 AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTATTTGCCTTATTTTCCTTAAAATCAA
* * * *
213398 AGTTTGTACTTTAAATGAGGCATGCATTGATTCTCATAAAAGTCTCCATTC-TTTCTAATACTGG
260 AGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC-AAGATTGG
* * ** * * * *
213462 GAA-CAAGAACACA-TTCCCTTTGTTAGGATGCATGACATTGATGCTTTGGTGTCACATGAGAAT
324 GAACCAAAAACACATTTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * * *
213525 CTTTTATTTCCACCATTATTGATAGAATCAAAGTTTGTCTCTCAAATAAGAAAAACATGAATACA
389 CTTGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * *
213590 CATACTAGTCCACATTCTATTCT
454 CATACTAATCC-CATTCTTTTCA
* * *
213613 AGATTAGGCACCATAAACAGAGTCATCTAATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
1 AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * * *
213678 GAAACACTTTCTTCCCACCAATTCTTGTAAATTCTAAGTTTGTGCCTGAAATGAGACAAGCTTGG
66 GAAACGCTTT-TTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * *
213743 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTTTCTTCAGTAGGAT
130 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* *
213808 AAATGATGTTGATGGTTTT-TTTTGCATGGAAATCTTTTATTTGCCTTATTTTCCTTAACATCAA
195 AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTATTTGCCTTATTTTCCTTAAAATCAA
* * * * * *
213872 AGTTTGAACATTAAATGAGACATGCATTGATTCTCATAAAAGTTTCCATTCCTTCCAAGATTGGG
260 AGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGG
** * * * *
213937 AAGAAAAAACACA-TTCCCTTTATTAGGATACATGACATTGATGCTTTTGTGTTGCAAGAGAAGC
325 AACCAAAAACACATTTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* * * * * * *
214001 TTTTCTTTCCACCGTTAATGATAAAATCAAAATTTGTCCCTTAAAAAAGAGAAACATGAATACTC
390 TTGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
214066 ATACTAATCCCCATTCCTTTT-A
455 ATACTAAT-CCCATT-CTTTTCA
* * * * * * *
214088 GGATTAGGCACCCTAAACATAGTCTTCTCATATGGATACAAGATATTGACGATTTAGTTTCGCAA
1 AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
*
214153 GAAACGTTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
66 GAAACG-CTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
214218 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
130 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * *
214283 AAATCATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAA
195 AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTATTTGCCTTATTTTCCTTAAAATCAA
* * * *
214348 AGTTTGCACTTTAAATGAGACATGCATTCATTCTCGTAAAAGTCTCCTTTCTTTACAAGATTGGG
260 AGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGG
* * * *
214413 AACTAAAAAAACACA-TTCTCTTCATTAGGATGCATGACGTTGATGCTTTGGTGTCACAAGAGAA
325 AAC--CAAAAACACATTTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA
* * * *
214477 GC-TGTTCTTTCCACCATTATTTATAGAATCAAAGTTTGTCTCTTAAATAAAACAAACTTGAATA
388 GCTTG-TCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
* *
214541 GTCATACTAATCCACATTCTTTTCT
452 CTCATACTAATCC-CATTCTTTTCA
* * * * * * ***
214566 AGAATAGGCACCAGAAACATAGTCTTCTCGTCAGGATACATGATATTGATTCTTTCGTTTCGTGG
1 AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * * * *
214631 GAAACGCTCTCTTCCCACCAATTTCTGTAAAGTATAAGTTCATTCCTCAAATGAGACAAACATAG
66 GAAACGCT-TTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* ** * *
214696 ATTCTAGTAAGGATCTTTATTCATTTAATGATTAGGCACCATAAACACATTCTCCCCATTAGGAT
130 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * *
214761 AAATGATATTAACGGTTTTCTTTTACTTGGAAATCTTTTATTTGCCTCT-CTTTCCTTAAAATCA
195 AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTATTTGCCT-TATTTTCCTTAAAATCA
* * *
214825 AAGTTTGTACTTTAAATGAAACAAGCATTGATTCTCGTAAAAGTCTCCCTT-TTTTCCAAGATTG
259 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT-CAAGATTG
*
214889 GGAACCAAAAACAC-TTTCTCTTCATTAGGATACAGGACATTGATGCTTT-GTGTCGCAAGAGAA
323 GGAACCAAAAACACATTTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA
* *
214952 GCTTGTCTTTCCACTGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATAC
388 GCTTGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAC
215017 TCATACTAATACCCATTCTTTTCA
453 TCATACTAAT-CCCATTCTTTTCA
* ** * * ** * * *
215041 GGATTAGGCATGATAAACATAGTTTTCTCGTAAGGATACGGGATATTGATGATTTGGTCTAGCAA
1 AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
*
215106 GAAACGATTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTG------AT----------T--
66 GAAACG-CTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * ** * * * *
215153 A----A--AA-G-TCTCCATTCTTTTCCAGATTGGGAACCAAAAACACATTC-CCTTCATTAGGA
130 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC-TCATTAGGA
* * * * * * * * ** *
215209 T-ACTTACATTGATGCTTTGCTGTCGCAAGGGAGGCTGAGACAAACATGGATTCTAGTAAGGATC
194 TAAATGATATTGATGGTTTTCTTTTGC-----A---TG-GA-AATC-T---TT-TA-T-TTG-CC
* * * * * * * * * *
215273 TTCATTCATTTCATAATTAGGCACTATAAACATATTCT-CCTTATTAGGATAAATG-A-T-ATTG
241 TT-ATT--TTCCTTAA--A---A-T-CAAA-GT-TTGTACTTTA-AATGAGACATGCATTGATT-
* * **** ** * ***** * * *
215334 ATGGT-TTTCTCTCGCATGACAATCTTTTCTTTGCCTTATTTTCCTTAAAACCAAAGTTTGTACT
292 CTCGTAAAAGTCTC-CAT-----TCTTTTC-AAG-ATTGGGAACC--AAAAACACA-TTTCT-CT
* * * * ** * * *** * ** *
215398 TTA-AATGAGACATG-CATTGA-----T--TCCCGTAAAAGTCCCCAT-TCTTTTTA-AGATTA-
345 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG-AAGCTTGTCTTTCCACCG-TTAT
* ** * * *** * ** * * *
215451 GGATCCAA--AAACTCATT-TCCTTCATTAGGATACATGACATTGATGCATTGGT-GTCGCAAGA
408 TGATAGAATCAAAGT--TTGT-C-TC-TTA-AATA-A-GACAAACATG-AATACTCAT-ACTA-A
*** * *
215512 GAAGCTTTTTTTTCCA
462 -TCCCATTCTTTT-CA
* * * * * * *
215528 CCG-TTATTG-A-TA-AAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATTACTCATACTA
1 -AGATTA-GGCACCATAAA-CATAGTCT-TCTC----ATAAG-GATACATG--------ATA-T-
* * ** * * * * * * ** * *
215589 ATCCCAATTCTTTTCGGGATTAGGCACCATAAAC-ATAGTCTTCTCA-TAAGGATACTGGATATT
47 -T---GATGC-TTT--GG-TTTCGCA--AGAAACGCT--TTTTCCCACCAA--TTTTTGTAAATT
* * * * ** * * ** * ** * * * *
215652 GATGATTTTGTTTCGC-AA-GAAACGATTTTTTCCCTCCAATTTTTGTAA--ATTTTAAGTTCAT
98 -CTAAGTTCGTGCCTCAAATGAGAC-A-----AACAT-GGATTCTAGTAAGGATCTTCA-TTCA-
* * ** * * *
215713 GCTTTAAATGAGACAAACATGG-ATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTGT
153 --TTT---CGTG---ATTA-GGCA--CTA-TAA--A-C-ACATTC---TCCTCATTA-G----G-
* **
215777 AAACACATTCTCCTCATCAGGATACGTGATATTGATGGTTTTCTTTTGCATGGAATTCTTTTCGT
193 ---------------AT-A--A-A--TGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTATT
**
215842 TGCCTTATTTTCCAAAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
237 TGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAG
* * * * * *
215907 TCCCCATTATTTTCAAGATTAGGATCCAAAAACTCATTTC-CTTCATTAGGATGCATGACATTGA
302 TCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTTCTCTTCATTAGGATACATGACATTGA
* * *
215971 TGCTTTGGTATCGCAAGAGAAGCATGTCTTTCCACTGTTATTGATAGAATCAAAGTTTGTCTCTT
367 TGCTTTGGTGTCGCAAGAGAAGCTTGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTT
* * * *
216036 AAATAAGATAAACAAGAATACTCATACTAATCCCTTTTCTTTTCT
432 AAATAAGACAAACATGAATACTCATACTAATCCC-ATTCTTTTCA
* * * *
216081 GGATTAGGCACCATAAACATAGTCTTCTCATGAGGATACATGATAGTGATGCTTTGGTTTCACAA
1 AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * *
216146 GAAACACTTTCTTCCCATCAATTTTTGTAAATTCTAAGTTCCTGCCTCAAATGAGACAATCATGG
66 GAAACGCTTT-TTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * *
216211 ATTCCAGTAAGGATCTTCATTCATTTTGCGATTAGGCACTATAAACACATTCTCTTCATTAGGAT
130 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * *
216276 AAATGATATAGATGGTTTTATTTTGCATGGAAATCTTTTCTTTGCATTTTTTTCCTTAAAATCAA
195 AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTATTTGCCTTATTTTCCTTAAAATCAA
* * * *
216341 AGTTTGTACTTTAAATGAGGCATGCATTGATTCTCATAAAAGTTTCCATTCTTTCCAAGATTGGG
260 AGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGG
* * * *
216406 AACCAAAAACACA-TTCCCTTCATTAGCACACATGACATTGATGCTTTTGTGGT-GCAAGAGAAG
325 AACCAAAAACACATTTCTCTTCATTAGGATACATGACATTGATGCTTTGGT-GTCGCAAGAGAAG
* * * * * * * *
216469 CTTTTCTTTCCACCATTAATGATAAAATCAAAATTTGTCTCGTAAATAATACAAACTTGAA-AGC
389 CTTGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA-C
* *
216533 TCATACTAATCCTAATCTTTTCA
453 TCATACTAATCCCATTCTTTTCA
* ** * * * * *
216556 GGATTAGGCACCATAAACATAGTCTTCTTTTACGGATACAGGATATTGAAGATTTGGTTTTGCAA
1 AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
** * * *
216621 GAAACATTTTTTTCCCA-TAATTTTTTTAAATTCTAAGTTCGTGTCTCAAATGAGACAAACATGG
66 GAAAC-GCTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* *
216685 ATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACATATTCTCCTCATTAGGAT
130 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* *
216750 AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTTCTTAAAA-CTA
195 AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTATTTGCCTTATTTTCCTTAAAATC-A
*
216814 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTC-CCTATTCTTTTCAAGATTA
259 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCC-ATTCTTTTCAAGATTG
* * *
216878 GGATCCAAAAACTCATTTC-CTTCATTAGGATACATGACATTGAAGCTTTGGTGTCAG-AAGAGA
323 GGAACCAAAAACACATTTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTC-GCAAGAGA
* * * * * *
216941 AGCTTTTTTTTCCACCGTTAATGACAAAATAAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
387 AGCTTGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
* *
217006 CTCATACTGATCCCCATTCTTTTCG
452 CTCATACTAAT-CCCATTCTTTTCA
217031 AGATTAGGCACCATAAACATAGT
1 AGATTAGGCACCATAAACATAGT
217054 TGTCGTAACG
Statistics
Matches: 3490, Mismatches: 650, Indels: 502
0.75 0.14 0.11
Matches are distributed among these distances:
448 17 0.00
449 39 0.01
450 1 0.00
451 2 0.00
453 1 0.00
456 2 0.00
457 3 0.00
458 3 0.00
459 2 0.00
462 2 0.00
463 2 0.00
464 1 0.00
465 2 0.00
466 2 0.00
467 1 0.00
469 8 0.00
471 1 0.00
473 5 0.00
474 524 0.15
475 1301 0.37
476 615 0.18
477 23 0.01
478 406 0.12
479 11 0.00
480 18 0.01
481 9 0.00
482 10 0.00
483 5 0.00
484 7 0.00
485 14 0.00
486 22 0.01
487 21 0.01
488 6 0.00
491 4 0.00
492 4 0.00
498 1 0.00
500 3 0.00
501 1 0.00
502 1 0.00
503 8 0.00
506 7 0.00
507 4 0.00
508 1 0.00
509 2 0.00
510 8 0.00
511 5 0.00
512 13 0.00
513 10 0.00
514 6 0.00
516 3 0.00
519 4 0.00
521 7 0.00
522 6 0.00
523 5 0.00
526 7 0.00
527 11 0.00
528 14 0.00
529 3 0.00
530 4 0.00
531 2 0.00
533 3 0.00
534 4 0.00
537 2 0.00
540 3 0.00
543 5 0.00
544 3 0.00
547 3 0.00
548 6 0.00
549 4 0.00
550 2 0.00
551 4 0.00
552 9 0.00
553 21 0.01
554 23 0.01
555 10 0.00
556 14 0.00
557 2 0.00
558 11 0.00
559 7 0.00
560 23 0.01
561 19 0.01
562 7 0.00
563 19 0.01
564 9 0.00
565 1 0.00
568 2 0.00
570 6 0.00
572 3 0.00
573 3 0.00
574 1 0.00
576 1 0.00
577 2 0.00
580 1 0.00
581 2 0.00
582 2 0.00
583 2 0.00
584 2 0.00
586 1 0.00
588 1 0.00
591 17 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (475 bp):
AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
GAAACGCTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
TTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
AATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTATTTGCCTTATTTTCCTTAAAATCAAA
GTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGA
ACCAAAAACACATTTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCT
TGTCTTTCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCA
TACTAATCCCATTCTTTTCA
Found at i:215548 original size:159 final size:157
Alignment explanation
Indices: 215379--217048 Score: 566
Period size: 159 Copynumber: 10.5 Consensus size: 157
215369 TTATTTTCCT
* ** * *
215379 TAAAACCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCCCGTAAAAGTCCCCATTCTTTTT
1 TAAAATCAAAGTTTGT-CTTTAAATGAGACAAACATTGATTCTCGTAAAAGTCCCCATTCTTTTC
*
215444 AAGATTAGG-ATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGATGCATTGGTGTCGC
65 AAGATTAGGCA-CCAAAAACTCATTTCC-TCATTAGGATACATGACATTGATGCATTGGTTTCGC
* *
215508 AAGAGAAGCTTTTTTTTCCACCGTTATTGA
128 AAGAGAAGCATTTCTTTCCACCGTTATTGA
* * * *
215538 TAAAATCAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATTACTCATACTAA-TCCCAATTCTT
1 TAAAATCAAAGTTTGTCT-TTAAATGAGACAAACATTG-ATT-CTCGTA-AAAGTCCCCATTCTT
** * * * *
215601 TTCGGGATTAGGCACCATAAACAT-AGTCTT-CTCATAAGGATAC-TGGATATTGATG-ATTTTG
62 TTCAAGATTAGGCACCAAAAAC-TCA-T-TTCCTCATTAGGATACAT-GACATTGATGCA-TTGG
* * *
215662 TTTCGCAAGA-AA-CGATTT-TTTCCCTCCAATTTTTG-
122 TTTCGCAAGAGAAGC-ATTTCTTT-CCACC-GTTATTGA
* ** * * * ** *
215697 TAAATTTTAAGTTCATG-CTTTAAATGAGACAAACATGGATTCTAGT-AAGGATCTTCATTCATT
1 TAAAATCAAAGTT--TGTCTTTAAATGAGACAAACATTGATTCTCGTAAAAG-TCCCCATTCTTT
* *** * * * * ** ** *
215760 TCATGATTAGGCACTGTAAACACATTCTCCTCATCAGGATACGTGATATTGATGGTTTTCTTTTG
63 TCAAGATTAGGCACCAAAAACTCATT-TCCTCATTAGGATACATGACATTGATGCATTGGTTTCG
* * * * * *
215825 CATG-GAATTCTTTTCGTT--GCC-TTATTTTCCA
127 CAAGAGAA-GCATTTCTTTCCACCGTTA--TT-GA
* ** *
215856 AAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCATTATTTTC
1 TAAAATCAAAGTTTGT-CTTTAAATGAGACAAACATTGATTCTCGTAAAAGTCCCCATTCTTTTC
* * *
215921 AAGATTAGG-ATCCAAAAACTCATTTCCTTCATTAGGATGCATGACATTGATGCTTTGGTATCGC
65 AAGATTAGGCA-CCAAAAACTCATTTCC-TCATTAGGATACATGACATTGATGCATTGGTTTCGC
* *
215985 AAGAGAAGCATGTCTTTCCACTGTTATTGA
128 AAGAGAAGCATTTCTTTCCACCGTTATTGA
* * * * * * * **
216015 TAGAATCAAAGTTTGTCTCTTAAATAAGATAAACA-AGAATACTCATACTAA-TCCCTTTTCTTT
1 TAAAATCAAAGTTTGTCT-TTAAATGAGACAAACATTG-ATTCTCGTA-AAAGTCCCCATTCTTT
** * * * * *
216078 TCTGGATTAGGCACCATAAACAT-AGTCTT-CTCATGAGGATACATGATAGTGATGCTTTGGTTT
63 TCAAGATTAGGCACCAAAAAC-TCA-T-TTCCTCATTAGGATACATGACATTGATGCATTGGTTT
* * ** *
216141 CACAAGA-AA-CACTTTCTTCCCATCAATTTTTG-
125 CGCAAGAGAAGCA-TTTCTTTCCA-CCGTTATTGA
* * * * * * * **
216173 TAAATTCTAAGTTCCTG-CCTCAAATGAGACAATCATGGATTC-CAGT-AAGGATCTTCATTCAT
1 TAAAATCAAAGTT--TGTCTTTAAATGAGACAAACATTGATTCTC-GTAAAAG-TCCCCATTC-T
* * * * * * * ** **
216235 TTTGC--GATTAGGCACTATAAACACATTCTCTTCATTAGGATAAATGATATAGATGGTTTTATT
61 TTT-CAAGATTAGGCACCAAAAACTCATT-TCCTCATTAGGATACATGACATTGATGCATTGGTT
* * * * * ** * **
216298 TTGCATG-GAAATCTTTTCTTTGCA-TTTTTTTCCT
124 TCGCAAGAG-AAGCATTTCTTTCCACCGTTATT-GA
* ** * ** *
216332 TAAAATCAAAGTTTGTACTTTAAATGAGGCATGCATTGATTCTCATAAAAGTTTCCATTCTTTCC
1 TAAAATCAAAGTTTGT-CTTTAAATGAGACAAACATTGATTCTCGTAAAAGTCCCCATTCTTTTC
* * * * * * * * *
216397 AAGATTGGGAACCAAAAACACATTCCCTTCATTAGCACACATGACATTGATGCTTTTGTGGT-GC
65 AAGATTAGGCACCAAAAACTCATTTCC-TCATTAGGATACATGACATTGATGCATTGGT-TTCGC
* * *
216461 AAGAGAAGCTTTTCTTTCCACCATTAATGA
128 AAGAGAAGCATTTCTTTCCACCGTTATTGA
* * * * ** * * * *
216491 TAAAATCAAAATTTGTCTCGTAAATAATACAAAC-TTGAAAGCTCATACTAA-T-CCTAATCTTT
1 TAAAATCAAAGTTTGTCT-TTAAATGAGACAAACATTG-ATTCTCGTA-AAAGTCCCCATTCTTT
* * * * * *
216553 TCAGGATTAGGCACCATAAACAT-AGTCTT-CT-TTTACGGATACAGGATATTGAAG-ATTTGGT
63 TCAAGATTAGGCACCAAAAAC-TCA-T-TTCCTCATTA-GGATACATGACATTGATGCA-TTGGT
* * *** **
216614 TTTGCAAGA-AA-CATTTTTTTCCCATAATT-TTTT
123 TTCGCAAGAGAAGCATTTCTTT-CCACCGTTATTGA
* * * * * * ** *
216647 TAAATTCTAAGTTCGTGTC-TCAAATGAGACAAACATGGATTCTAGT-AAGGATCTTCATTCATT
1 TAAAATCAAAGTT--TGTCTTTAAATGAGACAAACATTGATTCTCGTAAAAG-TCCCCATTCTTT
* * * * * ** ** *
216710 TCATGATTAGGCACTATAAACAT-ATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTT
63 TCAAGATTAGGCACCAAAAAC-TCATT-TCCTCATTAGGATACATGACATTGATGCATTGGTTTC
* * * *** * **
216774 GCATG-GAAATCTTTTCTTTGCC-TTATTTTTCT
126 GCAAGAG-AAGCATTTCTTT-CCACCGTTATTGA
** *
216806 TAAAA-CTAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCTATTCTTTT
1 TAAAATC-AAAGTTTGT-CTTTAAATGAGACAAACATTGATTCTCGTAAAAGTCCCCATTCTTTT
* * *
216870 CAAGATTAGG-ATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGAAGCTTTGGTGTCA
64 CAAGATTAGGCA-CCAAAAACTCATTTCC-TCATTAGGATACATGACATTGATGCATTGGTTTC-
* * *
216934 G-AAGAGAAGCTTTTTTTTCCACCGTTAATGA
126 GCAAGAGAAGCATTTCTTTCCACCGTTATTGA
* * * * * **
216965 CAAAATAAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATACTCAT-ACTGATCCCCATTCTTT
1 TAAAATCAAAGTTTGTCT-TTAAATGAGACAAACATTG-ATTCTCGTAAAAG-TCCCCATTCTTT
* *
217028 TCGAGATTAGGCACCATAAAC
63 TCAAGATTAGGCACCAAAAAC
217049 ATAGTTGTCG
Statistics
Matches: 1100, Mismatches: 297, Indels: 228
0.68 0.18 0.14
Matches are distributed among these distances:
154 1 0.00
155 3 0.00
156 40 0.04
157 92 0.08
158 250 0.23
159 588 0.53
160 110 0.10
161 11 0.01
162 5 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (157 bp):
TAAAATCAAAGTTTGTCTTTAAATGAGACAAACATTGATTCTCGTAAAAGTCCCCATTCTTTTCA
AGATTAGGCACCAAAAACTCATTTCCTCATTAGGATACATGACATTGATGCATTGGTTTCGCAAG
AGAAGCATTTCTTTCCACCGTTATTGA
Found at i:216315 original size:476 final size:474
Alignment explanation
Indices: 215244--217053 Score: 2639
Period size: 476 Copynumber: 3.8 Consensus size: 474
215234 CAAGGGAGGC
* *
215244 TGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATAATTAGGCACTATAAACATATT
1 TGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATT
* * *
215309 CTCCTTATTAGGATAAATGATATTGATGGTTTTCTCTCGCAT-GACAATCTTTTCTTTGCCTTAT
66 CTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGA-AATCTTTTCTTTGCCTTAT
* *
215373 TTTCCTTAAAACCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCCCGTAAAAGTCCCCATT
130 TTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCATT
* *
215438 CTTTTTAAGATTAGGATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGATGCATTGGT
195 CTTTTCAAGATTAGGATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGATGCTTTGGT
* *
215503 GTCGCAAGAGAAGCTTTTTTTTCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGAC
260 GTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGAC
*
215568 AAACATGAATTACTCATACTAATCCCAATTCTTTTCGGGATTAGGCACCATAAACATAGTCTTCT
325 AAACATGAA-TACTCATACTAATCCCTATTCTTTTC-GGATTAGGCACCATAAACATAGTCTTCT
*
215633 CATAAGGATAC-TGGATATTGATGATTTTGTTTCGCAAGAAACGATTTTTTCCC-TCCAATTTTT
388 CATAAGGATACAT-GATATTGATGATTTGGTTTCGCAAGAAAC-ATTTTTTCCCAT-CAATTTTT
* * *
215696 GTAAATTTTAAGTTCATGCTTTAAA
450 GTAAATTCTAAGTTCATGCCTCAAA
*
215721 TGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTGTAAACACATT
1 TGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATT
* ** * *
215786 CTCCTCATCAGGATACGTGATATTGATGGTTTTCTTTTGCATGGAATTCTTTTCGTTGCCTTATT
66 CTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATT
** *
215851 TTCCAAAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCATTA
131 TTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCATTC
* *
215916 TTTTCAAGATTAGGATCCAAAAACTCATTTCCTTCATTAGGATGCATGACATTGATGCTTTGGTA
196 TTTTCAAGATTAGGATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * * *
215981 TCGCAAGAGAAGCATGTCTTTCCACTGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGATA
261 TCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACA
* *
216046 AACAAGAATACTCATACTAATCCCTTTTCTTTTCTGGATTAGGCACCATAAACATAGTCTTCTCA
326 AACATGAATACTCATACTAATCCCTATTCTTTTC-GGATTAGGCACCATAAACATAGTCTTCTCA
* * * * *
216111 TGAGGATACATGATAGTGATGCTTTGGTTTCACAAGAAACACTTTCTTCCCATCAATTTTTGTAA
390 TAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACA-TTTTTTCCCATCAATTTTTGTAA
*
216176 ATTCTAAGTTCCTGCCTCAAA
454 ATTCTAAGTTCATGCCTCAAA
* * ***
216197 TGAGACAATCATGGATTCCAGTAAGGATCTTCATTCATTTTGCGATTAGGCACTATAAACACATT
1 TGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATT
* * * * *
216262 CTCTTCATTAGGATAAATGATATAGATGGTTTTATTTTGCATGGAAATCTTTTCTTTGCATTTTT
66 CTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATT
* * **
216327 TTCCTTAAAATCAAAGTTTGTACTTTAAATGAGGCATGCATTGATTCTCATAAAAGTTTCCATTC
131 TTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCATTC
* * * * * * * *
216392 TTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGCACACATGACATTGATGCTTTTGTG
196 TTTTCAAGATTAGGATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGATGCTTTGGT-
* * * *
216457 GT-GCAAGAGAAGCTTTTCTTTCCACCATTAATGATAAAATCAAAATTTGTCTCGTAAATAATAC
260 GTCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGAC
* *
216521 AAACTTGAA-AGCTCATACTAAT-CCTAATCTTTTCAGGATTAGGCACCATAAACATAGTCTTCT
325 AAACATGAATA-CTCATACTAATCCCTATTCTTTTC-GGATTAGGCACCATAAACATAGTCTTCT
** * * * * *
216584 TTTACGGATACAGGATATTGAAGATTTGGTTTTGCAAGAAACATTTTTTTCCCAT-AATTTTTTT
388 CATAAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACA-TTTTTTCCCATCAATTTTTGT
* *
216648 AAATTCTAAGTTCGTGTCTCAAA
452 AAATTCTAAGTTCATGCCTCAAA
*
216671 TGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACATATT
1 TGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATT
216736 CTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATT
66 CTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATT
* *
216801 TTTCTTAAAA-CTAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCTATT
131 TTCCTTAAAATC-AAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCATT
*
216865 CTTTTCAAGATTAGGATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGAAGCTTTGGT
195 CTTTTCAAGATTAGGATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGATGCTTTGGT
* * *
216930 GTCAG-AAGAGAAGCTTTTTTTTCCACCGTTAATGACAAAATAAAAGTTTGTCTCTTAAATAAGA
260 GTC-GCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGA
* *
216994 CAAACATGAATACTCATACTGATCCCCATTCTTTTCGAGATTAGGCACCATAAACATAGT
324 CAAACATGAATACTCATACTAATCCCTATTCTTTTCG-GATTAGGCACCATAAACATAGT
217054 TGTCGTAACG
Statistics
Matches: 1181, Mismatches: 140, Indels: 26
0.88 0.10 0.02
Matches are distributed among these distances:
473 3 0.00
474 332 0.28
475 117 0.10
476 421 0.36
477 306 0.26
478 2 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (474 bp):
TGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATT
CTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATT
TTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCCCCATTC
TTTTCAAGATTAGGATCCAAAAACTCATTTCCTTCATTAGGATACATGACATTGATGCTTTGGTG
TCGCAAGAGAAGCTTTTCTTTCCACCGTTAATGATAAAATCAAAGTTTGTCTCTTAAATAAGACA
AACATGAATACTCATACTAATCCCTATTCTTTTCGGATTAGGCACCATAAACATAGTCTTCTCAT
AAGGATACATGATATTGATGATTTGGTTTCGCAAGAAACATTTTTTCCCATCAATTTTTGTAAAT
TCTAAGTTCATGCCTCAAA
Found at i:220229 original size:52 final size:52
Alignment explanation
Indices: 220144--220268 Score: 214
Period size: 52 Copynumber: 2.4 Consensus size: 52
220134 ATATGAAAAG
* * *
220144 TTGCTTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGCAAAT
1 TTGCCTGCATGTATCGATACATTTAATAATGTATCGATACATCTAGGCAAAT
*
220196 TTGCCTGCATGTATCGATACATTTTATAATGTATCGATACATCTAGGCAAAT
1 TTGCCTGCATGTATCGATACATTTAATAATGTATCGATACATCTAGGCAAAT
220248 TTGCCTGCATGTATCGATACA
1 TTGCCTGCATGTATCGATACA
220269 AAGATCAGTG
Statistics
Matches: 69, Mismatches: 4, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
52 69 1.00
ACGTcount: A:0.29, C:0.18, G:0.18, T:0.36
Consensus pattern (52 bp):
TTGCCTGCATGTATCGATACATTTAATAATGTATCGATACATCTAGGCAAAT
Found at i:220281 original size:52 final size:51
Alignment explanation
Indices: 220144--220288 Score: 202
Period size: 52 Copynumber: 2.8 Consensus size: 51
220134 ATATGAAAAG
* *
220144 TTGCTTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGCAAAT
1 TTGCCTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTAGGCAAAT
* *
220196 TTGCCTGCATGTATCGATACATTTTATAATGTATCGATACATCTAGGCAAAT
1 TTGCCTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTAGGCAAAT
*
220248 TTGCCTGCATGTATCGATACA-AAGATCAGTGTATCGATACA
1 TTGCCTGCATGTATCGATACATTA-AT-AGTGTATCGATACA
220289 ATGTATTGAT
Statistics
Matches: 84, Mismatches: 7, Indels: 4
0.88 0.07 0.04
Matches are distributed among these distances:
51 2 0.02
52 82 0.98
ACGTcount: A:0.30, C:0.17, G:0.18, T:0.34
Consensus pattern (51 bp):
TTGCCTGCATGTATCGATACATTAATAGTGTATCGATACATCTAGGCAAAT
Found at i:220379 original size:33 final size:33
Alignment explanation
Indices: 220342--220408 Score: 89
Period size: 33 Copynumber: 2.0 Consensus size: 33
220332 AGTAGCTTAA
*
220342 ATTGTATCGATACAAAAAAATATGTATCGATAC
1 ATTGTATCAATACAAAAAAATATGTATCGATAC
* ***
220375 ATTGTATCAATACAACACTTTATGTATCGATAC
1 ATTGTATCAATACAAAAAAATATGTATCGATAC
220408 A
1 A
220409 AATCGTTGAA
Statistics
Matches: 29, Mismatches: 5, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
33 29 1.00
ACGTcount: A:0.42, C:0.15, G:0.10, T:0.33
Consensus pattern (33 bp):
ATTGTATCAATACAAAAAAATATGTATCGATAC
Found at i:221551 original size:49 final size:49
Alignment explanation
Indices: 221342--221948 Score: 732
Period size: 49 Copynumber: 12.7 Consensus size: 49
221332 AAAAGGATGT
* *
221342 CAATGTGCTGATTCAAGGCCAGCTACATTGAACTTAAAGATGGAAAATGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGAT-G--AAGGTGC
* *
221394 CAATATGCTGATTCAAGGCCAGCTATATTGGACTT----A--AAGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * *
221437 CAATGTGCTGATTCAAGGCCAGCTACACTAGACTTAAAGGTG-AGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
221485 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * * *
221534 CAATGTGCTGAGTCAAGGCTAGCTACATTGGTCTTAAAGATAAAGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * * *
221583 CAATATGCTGATTCAAGGCCAGCTATATTGGACTTAATGGTGAAGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * * * *
221632 CAATGTGCTGAGTCAAGGCTAGCTACATTGGTCTTAAAGATAAAGGTGT
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * * *
221681 CAATATGCTGATTCAAGGCCAACTATATTGGACTT----A--ACGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* *
221724 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATAAAGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* *
221773 CAATATGCTGATTCAAGGCCAGCTATATTGGACTT--A-AT---GGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* *
221816 CAATGTGCTGATTCAAGGCCAGCTACACTGGACTTAAAGGTG-AGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
*
221864 CAATGTGCTGAGTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
* * * *
221913 CAATATGCTGATTCATGGCCAGCTATATTGGGCTTA
1 CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTA
221949 GAAGGGTTGC
Statistics
Matches: 475, Mismatches: 61, Indels: 41
0.82 0.11 0.07
Matches are distributed among these distances:
43 110 0.23
45 2 0.00
46 3 0.01
47 2 0.00
48 90 0.19
49 236 0.50
52 32 0.07
ACGTcount: A:0.30, C:0.18, G:0.26, T:0.26
Consensus pattern (49 bp):
CAATGTGCTGATTCAAGGCCAGCTACATTGGACTTAAAGATGAAGGTGC
Found at i:221992 original size:33 final size:31
Alignment explanation
Indices: 221941--222045 Score: 158
Period size: 33 Copynumber: 3.3 Consensus size: 31
221931 CCAGCTATAT
221941 TGGGC-TTAGAAGGGTTGCCACCGACTTGTG
1 TGGGCTTTAGAAGGGTTGCCACCGACTTGTG
221971 TGGGCTTTAGAGAGTGGTTGCCACCGACTTGTG
1 TGGGCTTTAGA-AG-GGTTGCCACCGACTTGTG
*
222004 TGGGCTTTGGAAGAAGGTTGCCACCGACTTGTG
1 TGGGCTTTAGAAG--GGTTGCCACCGACTTGTG
222037 TGGGCTTTA
1 TGGGCTTTA
222046 AAAGAAGGTG
Statistics
Matches: 68, Mismatches: 3, Indels: 5
0.89 0.04 0.07
Matches are distributed among these distances:
30 5 0.07
31 5 0.07
32 4 0.06
33 54 0.79
ACGTcount: A:0.16, C:0.18, G:0.36, T:0.30
Consensus pattern (31 bp):
TGGGCTTTAGAAGGGTTGCCACCGACTTGTG
Found at i:222051 original size:33 final size:32
Alignment explanation
Indices: 221948--222059 Score: 154
Period size: 33 Copynumber: 3.4 Consensus size: 32
221938 TATTGGGCTT
*
221948 AGAAGGGTTGCCACCGACTTGTGTGGGCTTTAG
1 AGAA-GGTTGCCACCGACTTGTGTGGGCTTTAA
* *
221981 AGAGTGGTTGCCACCGACTTGTGTGGGCTTTGGA
1 AGA-AGGTTGCCACCGACTTGTGTGGGCTTT-AA
222015 AGAAGGTTGCCACCGACTTGTGTGGGCTTTAAA
1 AGAAGGTTGCCACCGACTTGTGTGGGCTTT-AA
222048 AGAAGG-TGCCAC
1 AGAAGGTTGCCAC
222060 GGAGTCGTGG
Statistics
Matches: 71, Mismatches: 6, Indels: 5
0.87 0.07 0.06
Matches are distributed among these distances:
32 6 0.08
33 62 0.87
34 3 0.04
ACGTcount: A:0.21, C:0.19, G:0.35, T:0.26
Consensus pattern (32 bp):
AGAAGGTTGCCACCGACTTGTGTGGGCTTTAA
Found at i:222092 original size:33 final size:32
Alignment explanation
Indices: 222035--222511 Score: 363
Period size: 33 Copynumber: 15.2 Consensus size: 32
222025 CACCGACTTG
222035 TGTGGGCTTTAAAA-G--AAGGTGCCACGGAGT
1 TGTGGGC-TTAAAAGGAAAAGGTGCCACGGAGT
* * *
222065 CGTGGACTTAAAAGGAAAAGAGTGCCACGTAGT
1 TGTGGGCTTAAAAGGAAAAG-GTGCCACGGAGT
* * * *
222098 TATGGGCTTTAAAGGAAAAAGATGCCATGGAGT
1 TGTGGGCTTAAAAGG-AAAAGGTGCCACGGAGT
* *
222131 TGTGGGCTT---A--AAATGGTGCCACAGAGT
1 TGTGGGCTTAAAAGGAAAAGGTGCCACGGAGT
* *
222158 TGTGGACTTAAAAGGAAAAGAGTGCCACGTAGT
1 TGTGGGCTTAAAAGGAAAAG-GTGCCACGGAGT
*
222191 TGTGGGCTTTAAAGGAAAAAAGGGTGCCACGGAGT
1 TGTGGGCTTAAAAGG--AAAA-GGTGCCACGGAGT
* * *
222226 CGTGGACTTAAAA-G----GGTGCCACAGAGT
1 TGTGGGCTTAAAAGGAAAAGGTGCCACGGAGT
* *
222253 TGTGGGCTTTAAA--AAGA-GTGCCACGGAGT
1 TGTGGGCTTAAAAGGAAAAGGTGCCACGGAGT
* *
222282 CGTGGACTTAAAAGGAAAAAGGGTGCCACGGAGT
1 TGTGGGCTTAAAAGG-AAAA-GGTGCCACGGAGT
*
222316 TGTGGGCTTAGAAGGAAAAAGAGTGCCACGGAGT
1 TGTGGGCTTAAAAGG-AAAAG-GTGCCACGGAGT
*
222350 TGTGGGCTT-AAACG----GGTGCCACGGAGT
1 TGTGGGCTTAAAAGGAAAAGGTGCCACGGAGT
* *
222377 TATGGGCTTAAAAGGAAAAGAGTGCCACGTAGT
1 TGTGGGCTTAAAAGGAAAAG-GTGCCACGGAGT
222410 TGTGGGCTTTGAAAAGG---AGGTGCCACGGAGT
1 TGTGGGC-TT-AAAAGGAAAAGGTGCCACGGAGT
* * *
222441 TGTGGACTTTGAAAGAAAAAGGTGCCACGGAGT
1 TGTGGGC-TTAAAAGGAAAAGGTGCCACGGAGT
* * * *
222474 CGTGGACTTTGAAAGAAAAAGGTGCCACGGAGT
1 TGTGGGC-TTAAAAGGAAAAGGTGCCACGGAGT
*
222507 CGTGG
1 TGTGG
222512 ACTTTGATGC
Statistics
Matches: 364, Mismatches: 48, Indels: 67
0.76 0.10 0.14
Matches are distributed among these distances:
27 63 0.17
28 5 0.01
29 27 0.07
30 12 0.03
31 20 0.05
32 13 0.04
33 134 0.37
34 58 0.16
35 31 0.09
36 1 0.00
ACGTcount: A:0.31, C:0.14, G:0.35, T:0.21
Consensus pattern (32 bp):
TGTGGGCTTAAAAGGAAAAGGTGCCACGGAGT
Done.