Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold400
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 2847997
ACGTcount: A:0.34, C:0.16, G:0.16, T:0.34
File 16 of 17
Found at i:2568615 original size:13 final size:13
Alignment explanation
Indices: 2568597--2568622 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
2568587 ACAAAGATCC
2568597 ATGTATCGATACA
1 ATGTATCGATACA
2568610 ATGTATCGATACA
1 ATGTATCGATACA
2568623 CAGAAAAATG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:2568621 original size:33 final size:33
Alignment explanation
Indices: 2568579--2568642 Score: 92
Period size: 33 Copynumber: 1.9 Consensus size: 33
2568569 ATTTCCAAAA
***
2568579 GTATCGATACAAAGATCCATGTATCGATACAAT
1 GTATCGATACAAAGAAAAATGTATCGATACAAT
*
2568612 GTATCGATACACAGAAAAATGTATCGATACA
1 GTATCGATACAAAGAAAAATGTATCGATACA
2568643 TTTCCTTGGC
Statistics
Matches: 27, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
33 27 1.00
ACGTcount: A:0.42, C:0.17, G:0.16, T:0.25
Consensus pattern (33 bp):
GTATCGATACAAAGAAAAATGTATCGATACAAT
Found at i:2568686 original size:19 final size:18
Alignment explanation
Indices: 2568662--2568729 Score: 83
Period size: 19 Copynumber: 3.9 Consensus size: 18
2568652 CAGTAGCTAA
2568662 TTATGTATCGATACAATAC
1 TTATGTATCGATACAA-AC
2568681 TTATGTATCGATAC--A-
1 TTATGTATCGATACAAAC
2568696 -T-TGTATCGATACAAAAC
1 TTATGTATCGATAC-AAAC
2568713 TTATGTATCGATACAAA
1 TTATGTATCGATACAAA
2568730 TTGTTGAATT
Statistics
Matches: 43, Mismatches: 0, Indels: 13
0.77 0.00 0.23
Matches are distributed among these distances:
13 11 0.26
14 1 0.02
16 2 0.05
18 4 0.09
19 25 0.58
ACGTcount: A:0.38, C:0.15, G:0.12, T:0.35
Consensus pattern (18 bp):
TTATGTATCGATACAAAC
Found at i:2568702 original size:13 final size:13
Alignment explanation
Indices: 2568684--2568708 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
2568674 ACAATACTTA
2568684 TGTATCGATACAT
1 TGTATCGATACAT
2568697 TGTATCGATACA
1 TGTATCGATACA
2568709 AAACTTATGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:2568706 original size:32 final size:32
Alignment explanation
Indices: 2568665--2568727 Score: 117
Period size: 32 Copynumber: 2.0 Consensus size: 32
2568655 TAGCTAATTA
*
2568665 TGTATCGATACAATACTTATGTATCGATACAT
1 TGTATCGATACAAAACTTATGTATCGATACAT
2568697 TGTATCGATACAAAACTTATGTATCGATACA
1 TGTATCGATACAAAACTTATGTATCGATACA
2568728 AATTGTTGAA
Statistics
Matches: 30, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
32 30 1.00
ACGTcount: A:0.37, C:0.16, G:0.13, T:0.35
Consensus pattern (32 bp):
TGTATCGATACAAAACTTATGTATCGATACAT
Found at i:2572690 original size:42 final size:42
Alignment explanation
Indices: 2572629--2572760 Score: 194
Period size: 42 Copynumber: 3.1 Consensus size: 42
2572619 TAGCCCTCAA
* * *
2572629 AGAGAAAGAAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAAG
*
2572671 AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGAGACAAG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAAG
* *
2572713 AGAGATAGTAGAGAGAGGAGGGATGACAGGAGGAGGAGAGAAG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGA-GAGACAAG
2572756 A-AGAT
1 AGAGAT
2572761 GGAAGAGTGA
Statistics
Matches: 82, Mismatches: 7, Indels: 2
0.90 0.08 0.02
Matches are distributed among these distances:
42 74 0.90
43 8 0.10
ACGTcount: A:0.44, C:0.02, G:0.45, T:0.08
Consensus pattern (42 bp):
AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAAG
Found at i:2582006 original size:42 final size:41
Alignment explanation
Indices: 2581940--2582071 Score: 124
Period size: 42 Copynumber: 3.1 Consensus size: 41
2581930 TTACTCTTCC
* * * *
2581940 ATCT-TCTTTTCTCCTCCTCCTATCATCCCTCCCCTTTCTATT
1 ATCTCTCTTATCT-CTCCT-CTATCATCCCTCCCATCTCTACT
* *
2581982 ATCTCT-TCTATCTCTCCCTCTATCATCCCTTCTATCTCTACT
1 ATCTCTCT-TATCTCT-CCTCTATCATCCCTCCCATCTCTACT
* *
2582024 ATCTCTCTTATCTCTCCTCATATCATCCCTCCTATCTCTTCT
1 ATCTCTCTTATCTCTCCTC-TATCATCCCTCCCATCTCTACT
*
2582066 TTCTCT
1 ATCTCT
2582072 TTGAAGGCTA
Statistics
Matches: 76, Mismatches: 9, Indels: 10
0.80 0.09 0.11
Matches are distributed among these distances:
41 4 0.05
42 63 0.83
43 9 0.12
ACGTcount: A:0.12, C:0.41, G:0.00, T:0.47
Consensus pattern (41 bp):
ATCTCTCTTATCTCTCCTCTATCATCCCTCCCATCTCTACT
Found at i:2582059 original size:24 final size:23
Alignment explanation
Indices: 2581989--2582062 Score: 68
Period size: 24 Copynumber: 3.3 Consensus size: 23
2581979 ATTATCTCTT
*
2581989 CTATCTCTCCCTCTATCATCCCTT
1 CTATCTCT-CCTCTATCATCCCTC
*
2582013 CTATCTCT--ACTATC-T--CTC
1 CTATCTCTCCTCTATCATCCCTC
*
2582031 TTATCTCTCCTCATATCATCCCTC
1 CTATCTCTCCTC-TATCATCCCTC
2582055 CTATCTCT
1 CTATCTCT
2582063 TCTTTCTCTT
Statistics
Matches: 39, Mismatches: 5, Indels: 12
0.70 0.09 0.21
Matches are distributed among these distances:
18 9 0.23
20 2 0.05
21 9 0.23
22 1 0.03
24 18 0.46
ACGTcount: A:0.15, C:0.42, G:0.00, T:0.43
Consensus pattern (23 bp):
CTATCTCTCCTCTATCATCCCTC
Found at i:2586436 original size:474 final size:474
Alignment explanation
Indices: 2585057--2604822 Score: 25010
Period size: 474 Copynumber: 41.7 Consensus size: 474
2585047 TGTCTCCCGA
* * * *
2585057 TCTCATAAAGAAAGGAGATAATTACGAGCA-CTGATGCTTGTCTTATTTAAGGGATGAACTTTGA
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATC-GATGCTTGTCTTATTTAAGGGATGAACTTTGA
* * * *
2585121 TTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATAAATTTC-TTTAATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTT-ATC
* * * *
2585185 CTAATGAGGGGAATGTGTTTGTAGTGCCTAATCACAAAATGAAAGAAGATTATTACTAGAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * * *
2585250 AGTTTGTC-CTATTTGAGGCACGAACTTAAACTTTATAAAAAATGGTGGGAAAAAAGCCTTTGTT
194 TGTTTGTCTCT-TTTGAAGCACGAACTTAGACTTTAT-AAAAATGGTGGGAAAAAAGCCTTTCTT
*
2585314 GCAAAACGAAAGCATCAATATGATGTATCCTAATGAGATGACAATGTTTATGGTGCCTAATCTGG
257 GCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGG
* *
2585379 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGCTTCTAT
322 AAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAT
* * * *
2585444 CACAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATGTCTTGCATCCTAATGA
387 CAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGA
*
2585509 AGGAAATGTGTTTTGGCTTCATAA-
452 AGGGAATGTGTTTTGGC-TC-TAAT
* * * * * * *
2585533 TCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATTCTTGTCTTATTTAAGGTATGAACATCGT
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
**
2585597 TTTAAAGGAAAAT-TTGCAAAGAAAAGA-TTCCAATGCAAAAGAAAATCATCAATATCATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATGCAAAAGAAAATCATCAATATCATTTATC
* * * * * *
2585660 CTAATAAGGACAATATGTTTATAGTGCCTATTCACAAAATGAATGAAGATCGTTGCTAGAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* ** * * *
2585725 AGTTCATCTCATTTGAAGCACGAACTTAGACTTTACAAAAAAATGGTGGGAAAAAAGCTTTTCTT
194 TGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT--ATAAAAATGGTGGGAAAAAAGCCTTTCTT
* * * * * * *
2585790 GCGAAACGAAAGCGTTAATATGATGTATCCTAAAGAGAAGACTATGTTTATGGTGCCTTATCTTG
257 GCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGG
* * *
2585855 AAAGGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTAATTCTAT
322 AAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAT
* * * *
2585920 CAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATATATCCTAAGGA
387 CAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGA
*
2585985 AGGGAATGTTTTTTGGCTCTAAT
452 AGGGAATGTGTTTTGGCTCTAAT
* * * * *
2586008 TCTCGTAAAGAATGGAGATTGTTACAAGAATCGATGCCTGTCTTATTTAAGGGCTGAACTTTCAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
*
2586073 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATTAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
* **
2586138 AATGTGGAGAATGCATTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* *
2586203 TTTGTCTCTTTTGAAGCACGAATTTCA-ACTTTATAAAAATGGTGGGAAAATAGCCTTTCTTGCA
196 TTTGTCTCTTTTGAAGCACGAACTT-AGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* * * * ***
2586267 AAATGAAAGCATCGATATGATGTATCCTAATGAGAAGACAATGTTTCTGGTGCATAATCCAAAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * * *
2586332 AGAATGGGGATTAGTATGAGTTTTCATGTTTATCTTATTTATGAGACAAACTTTGATTCTATCAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * ** *
2586397 AAATGTTCGAAGGAAAAGTTTTTCTTGTAACGTCAAAGCATC-ATTGTCATGTATCCTAAT-AAG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATT-TCATGTATCCTAATGAA-
2586460 GGGAATGTGTTTTGGCTTCATAAT
453 GGGAATGTGTTTTGGC-TC-TAAT
* * * ** * * * *
2586484 CCT-GAAAAGAACT-GAGACAGTTATAAGAATCGATTCTTGTCTTATTTAAGGTATAAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
** *
2586547 TTTATTGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATAATCAATATCATTTATCC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
* * * * *
2586612 AAATGAGGAGAATGCGTTTGTAGTGCCTAATCAAAAAATGAAAGAAGATCATTACTAGAATCCA-
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * *
2586676 --------CGTTTGAGGCAGGAACTTAGACTTTA-AAAAATTTGGTGGGAAAAAAGCCTTTCTTG
195 GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAA--TGGTGGGAAAAAAGCCTTTCTTG
* * **
2586732 CAAAACGAAAGCATCCATATGATGTATCCTAATGAGAAGACAATATTTATGGTGCCTAATCCAGA
258 CAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGA
* * * * *
2586797 AAAG-AATGGGATTAGTATGAGTATTCGTGTTTATCTTATTTAAGAGACAAACTTTGATTCTGTT
323 AAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATC
* * *
2586861 AAAAACGGTGGAAGGAAAAGTTTTTCTTGCAACCTCAAAGCATCAATTTCATATATCCTAATGAA
388 AAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAA
* **
2586926 GGGAATGTGTTTTGGGTCCGAT
453 GGGAATGTGTTTTGGCTCTAAT
* * * * *
2586948 TCTCATAAACAATGGAGACTA-TTACAAGAATCGATACTTGTCCTATTTAAGGGATGAACTTTGA
1 TCTCGTAAAGAATGGAGA-TAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
*
2587012 TTTAAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
* * * * * * *
2587077 TAATGAGGAGAATATGTTTTTACTTCCTAA--ACATAATGAAAGAATATCATTACTAGAATCCAT
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * * * *
2587140 GCTTGTCTCTTTTGAAGCACAAACTTAGAGTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTCC
195 GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTA-TAAAAATGGTGGGAAAAAAGCCTTTCTTGC
* * * *
2587205 AGAACGAAAGCATCAATGTGATGTATCCTAATGAGAAGACAATGTTTATGGTGCATAATCTAGAA
259 AAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAA
*
2587270 AAGAATA-GGGATTAGTATGAGTATTCATGTTTGTCTTATTTATGAGACAAACTTTGATTCTATC
324 AAGAA-AGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATC
* ** *
2587334 AAAAACGTTGGAAGGAAAAGTTTTTCTTGTAACGTCAAAGCATC-ATTGTCATGTATCCTAAT-A
388 AAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATT-TCATGTATCCTAATGA
2587397 AGGGGAATGTGTTTTGGCTTCATAA-
452 A-GGGAATGTGTTTTGGC-TC-TAAT
* * * * * * * * *
2587422 TCTTGAAAAGAACT-GAGACAGTTACAAGAATCAATTCTTGTCTTATTTAAGGTATAAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* * *
2587486 TTTAATGGAACATAGGGCAAAGAAAAG-TTTCCCATGCAAAAGAAAATCATCAATATTATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTT-CCATGCAAAAGAAAATCATCAATATCATTTATC
** *
2587550 CTAATGAGCTGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATTCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* *
2587615 TGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGC
194 TGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGC
** *
2587680 AAAACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTTGGAA
259 AAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAA
* *
2587745 AAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAGCTTTGATTCTATCA
324 AAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCA
* * * *
2587810 AAAATGGTGGAAAGAAAAGTTTTTCTTGCGACA-CAAAAGCATCAGTTTCATGTATCCTAAGGAA
389 AAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATC-AAAGCATCAATTTCATGTATCCTAATGAA
*
2587874 GGGATTGCT-TTTTGGCTCTAAT
453 GGGAATG-TGTTTTGGCTCTAAT
* * * * * *
2587896 TCTCGTAAAGGATGGAGATTGTTACGAGAATCGATACCTGTCTTATTTAAGGGATAAACTTTAAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* *
2587961 TTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
*
2588026 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
*
2588091 TTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
196 TTTGTCT-CTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2588155 AAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2588220 AGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATAAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * * *
2588285 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGTCAATGTCATGTAACTTAATGAAGG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGG
2588350 GAATGTGTTTTGGCTTCATAA-
455 GAATGTGTTTTGGC-TC-TAAT
* * * * * * *
2588371 TCTTGAAAAGAACT-GAGACAGTTACGAGAATCGATTCTTATCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2588435 TTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAAAATCATCAATATTATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATC
* * * ** *
2588499 CTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGATTGTTACTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * **
2588564 TGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAATGGCAGGAAAAAAGCCTTTCT
194 TGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT---ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * *
2588629 TGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATC-
256 TGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCT
** * *
2588692 CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATTTAAGAGAGAAACTTTGATTC
320 GGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTC
* ** *
2588757 TATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGTATCCTAA
384 TATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAA
** *
2588821 AAAAGGGAAT-TTTTTTGGCTCTAAT
449 TGAAGGGAATGTGTTTTGGCTCTAAT
* * * *
2588846 TCTCGTAAAGAATGGAGATTGTTATGGGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
*
2588911 TTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
** * *
2588975 AATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATTCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* *
2589040 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGCAA
196 TTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
** *
2589105 AACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTTGGAAAA
261 AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAAA
* *
2589170 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAGCTTTGATTCTATCAAA
326 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
* * * *
2589235 AATGGTGGAAAGAAAAGTTTTTCTTGCGACA-CAAAAGCATCAGTTTCATGTATCCTAAGGAAGG
391 AACGGTGGAAGGAAAAGTTTTTCTTGCGACATC-AAAGCATCAATTTCATGTATCCTAATGAAGG
*
2589299 GATTGCT-TTTTGGCTCTAAT
455 GAATG-TGTTTTGGCTCTAAT
* * * * * *
2589319 TCTCGTAAAGGATGGAGATTGTTACGAGAATCGATACCTGTCTTATTTAAGGGATAAACTTTAAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* *
2589384 TTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
*
2589449 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
*
2589514 TTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
196 TTTGTCT-CTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2589578 AAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2589643 AGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATAAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * * *
2589708 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGTCAATGTCATGTAACTTAATGAAGG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGG
2589773 GAATGTGTTTTGGCTTCATAA-
455 GAATGTGTTTTGGC-TC-TAAT
* * * * * * *
2589794 TCTTGAAAAGAACT-GAGACAGTTACGAGAATCGATTCTTATCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2589858 TTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAAAATCATCAATATTATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATC
* * * ** *
2589922 CTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGATTGTTACTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * **
2589987 TGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAATGGCAGGAAAAAAGCCTTTCT
194 TGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT---ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * *
2590052 TGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATC-
256 TGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCT
** * *
2590115 CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATTTAAGAGAGAAACTTTGATTC
320 GGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTC
* ** *
2590180 TATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGTATCCTAA
384 TATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAA
** *
2590244 AAAAGGGAAT-TTTTTTGGCTCTAAT
449 TGAAGGGAATGTGTTTTGGCTCTAAT
* * * *
2590269 TCTCGTAAAGAATGGAGATTGTTATGGGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
*
2590334 TTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
** * *
2590398 AATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATTCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* *
2590463 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGCAA
196 TTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
** *
2590528 AACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTTGGAAAA
261 AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAAA
* *
2590593 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAGCTTTGATTCTATCAAA
326 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
* * * *
2590658 AATGGTGGAAAGAAAAGTTTTTCTTGCGACA-CAAAAGCATCAGTTTCATGTATCCTAAGGAAGG
391 AACGGTGGAAGGAAAAGTTTTTCTTGCGACATC-AAAGCATCAATTTCATGTATCCTAATGAAGG
*
2590722 GATTGCT-TTTTGGCTCTAAT
455 GAATG-TGTTTTGGCTCTAAT
* * * * * *
2590742 TCTCGTAAAGGATGGAGATTGTTACGAGAATCGATACCTGTCTTATTTAAGGGATAAACTTTAAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* *
2590807 TTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
*
2590872 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
*
2590937 TTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
196 TTTGTCT-CTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2591001 AAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2591066 AGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATAAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * * *
2591131 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGTCAATGTCATGTAACTTAATGAAGG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGG
2591196 GAATGTGTTTTGGCTTCATAA-
455 GAATGTGTTTTGGC-TC-TAAT
* * * * * * *
2591217 TCTTGAAAAGAACT-GAGACAGTTACGAGAATCGATTCTTATCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2591281 TTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAAAATCATCAATATTATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATC
* * * ** *
2591345 CTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGATTGTTACTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * **
2591410 TGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAATGGCAGGAAAAAAGCCTTTCT
194 TGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT---ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * *
2591475 TGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATC-
256 TGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCT
** * *
2591538 CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATTTAAGAGAGAAACTTTGATTC
320 GGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTC
* ** *
2591603 TATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGTATCCTAA
384 TATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAA
** *
2591667 AAAAGGGAAT-TTTTTTGGCTCTAAT
449 TGAAGGGAATGTGTTTTGGCTCTAAT
* * * *
2591692 TCTCGTAAAGAATGGAGATTGTTATGGGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
*
2591757 TTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
** * *
2591821 AATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATTCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* *
2591886 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGCAA
196 TTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
** *
2591951 AACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTTGGAAAA
261 AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAAA
* *
2592016 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAGCTTTGATTCTATCAAA
326 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
* * * *
2592081 AATGGTGGAAAGAAAAGTTTTTCTTGCGACA-CAAAAGCATCAGTTTCATGTATCCTAAGGAAGG
391 AACGGTGGAAGGAAAAGTTTTTCTTGCGACATC-AAAGCATCAATTTCATGTATCCTAATGAAGG
*
2592145 GATTGCT-TTTTGGCTCTAAT
455 GAATG-TGTTTTGGCTCTAAT
* * * * * *
2592165 TCTCGTAAAGGATGGAGATTGTTACGAGAATCGATACCTGTCTTATTTAAGGGATAAACTTTAAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* *
2592230 TTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
*
2592295 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
*
2592360 TTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
196 TTTGTCT-CTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2592424 AAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2592489 AGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATAAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * * *
2592554 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGTCAATGTCATGTAACTTAATGAAGG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGG
2592619 GAATGTGTTTTGGCTTCATAA-
455 GAATGTGTTTTGGC-TC-TAAT
* * * * * * *
2592640 TCTTGAAAAGAACT-GAGACAGTTACGAGAATCGATTCTTATCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2592704 TTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAAAATCATCAATATTATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATC
* * * ** *
2592768 CTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGATTGTTACTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * **
2592833 TGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAATGGCAGGAAAAAAGCCTTTCT
194 TGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT---ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * *
2592898 TGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATC-
256 TGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCT
** * *
2592961 CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATTTAAGAGAGAAACTTTGATTC
320 GGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTC
* ** *
2593026 TATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGTATCCTAA
384 TATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAA
** *
2593090 AAAAGGGAAT-TTTTTTGGCTCTAAT
449 TGAAGGGAATGTGTTTTGGCTCTAAT
* * * *
2593115 TCTCGTAAAGAATGGAGATTGTTATGGGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
*
2593180 TTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
** * *
2593244 AATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATTCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* *
2593309 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGCAA
196 TTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
** *
2593374 AACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTTGGAAAA
261 AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAAA
* *
2593439 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAGCTTTGATTCTATCAAA
326 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
* * * *
2593504 AATGGTGGAAAGAAAAGTTTTTCTTGCGACA-CAAAAGCATCAGTTTCATGTATCCTAAGGAAGG
391 AACGGTGGAAGGAAAAGTTTTTCTTGCGACATC-AAAGCATCAATTTCATGTATCCTAATGAAGG
*
2593568 GATTGCT-TTTTGGCTCTAAT
455 GAATG-TGTTTTGGCTCTAAT
* * * * * *
2593588 TCTCGTAAAGGATGGAGATTGTTACGAGAATCGATACCTGTCTTATTTAAGGGATAAACTTTAAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* *
2593653 TTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
*
2593718 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
*
2593783 TTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
196 TTTGTCT-CTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2593847 AAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2593912 AGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATAAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * * *
2593977 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGTCAATGTCATGTAACTTAATGAAGG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGG
2594042 GAATGTGTTTTGGCTTCATAA-
455 GAATGTGTTTTGGC-TC-TAAT
* * * * * * *
2594063 TCTTGAAAAGAACT-GAGACAGTTACGAGAATCGATTCTTATCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2594127 TTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAAAATCATCAATATTATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATC
* * * ** *
2594191 CTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGATTGTTACTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * **
2594256 TGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAATGGCAGGAAAAAAGCCTTTCT
194 TGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT---ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * *
2594321 TGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATC-
256 TGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCT
** * *
2594384 CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATTTAAGAGAGAAACTTTGATTC
320 GGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTC
* ** *
2594449 TATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGTATCCTAA
384 TATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAA
** *
2594513 AAAAGGGAAT-TTTTTTGGCTCTAAT
449 TGAAGGGAATGTGTTTTGGCTCTAAT
* * * *
2594538 TCTCGTAAAGAATGGAGATTGTTATGGGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
*
2594603 TTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
** * *
2594667 AATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATTCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* *
2594732 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGCAA
196 TTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
** *
2594797 AACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTTGGAAAA
261 AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAAA
* *
2594862 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAGCTTTGATTCTATCAAA
326 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
* * * *
2594927 AATGGTGGAAAGAAAAGTTTTTCTTGCGACA-CAAAAGCATCAGTTTCATGTATCCTAAGGAAGG
391 AACGGTGGAAGGAAAAGTTTTTCTTGCGACATC-AAAGCATCAATTTCATGTATCCTAATGAAGG
*
2594991 GATTGCT-TTTTGGCTCTAAT
455 GAATG-TGTTTTGGCTCTAAT
* * * * * *
2595011 TCTCGTAAAGGATGGAGATTGTTACGAGAATCGATACCTGTCTTATTTAAGGGATAAACTTTAAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* *
2595076 TTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
*
2595141 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
*
2595206 TTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
196 TTTGTCT-CTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2595270 AAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2595335 AGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATAAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * * *
2595400 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGTCAATGTCATGTAACTTAATGAAGG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGG
2595465 GAATGTGTTTTGGCTTCATAA-
455 GAATGTGTTTTGGC-TC-TAAT
* * * * * * *
2595486 TCTTGAAAAGAACT-GAGACAGTTACGAGAATCGATTCTTATCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2595550 TTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAAAATCATCAATATTATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATC
* * * ** *
2595614 CTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGATTGTTACTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * **
2595679 TGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAATGGCAGGAAAAAAGCCTTTCT
194 TGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT---ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * *
2595744 TGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATC-
256 TGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCT
** * *
2595807 CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATTTAAGAGAGAAACTTTGATTC
320 GGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTC
* ** *
2595872 TATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGTATCCTAA
384 TATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAA
** *
2595936 AAAAGGGAAT-TTTTTTGGCTCTAAT
449 TGAAGGGAATGTGTTTTGGCTCTAAT
* * * *
2595961 TCTCGTAAAGAATGGAGATTGTTATGGGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
*
2596026 TTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
** * *
2596090 AATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATTCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* *
2596155 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGCAA
196 TTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
** *
2596220 AACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTTGGAAAA
261 AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAAA
* *
2596285 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAGCTTTGATTCTATCAAA
326 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
* * * *
2596350 AATGGTGGAAAGAAAAGTTTTTCTTGCGACA-CAAAAGCATCAGTTTCATGTATCCTAAGGAAGG
391 AACGGTGGAAGGAAAAGTTTTTCTTGCGACATC-AAAGCATCAATTTCATGTATCCTAATGAAGG
*
2596414 GATTGCT-TTTTGGCTCTAAT
455 GAATG-TGTTTTGGCTCTAAT
* * * * * *
2596434 TCTCGTAAAGGATGGAGATTGTTACGAGAATCGATACCTGTCTTATTTAAGGGATAAACTTTAAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* *
2596499 TTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
*
2596564 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* *
2596629 TTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAACCTTTCTTGCA
196 TTTGTCT-CTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2596693 AAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2596758 AGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATAAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * * * *
2596823 AAACGGTGGAAGAAAAAGTTTTTCTTGTGACATCAAAGCGTCAATGTCATGTAACTTAATGAAGG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGG
2596888 GAATGTGTTTTGGCTTCATAA-
455 GAATGTGTTTTGGC-TC-TAAT
* * * * * * *
2596909 TCTTGAAAAGAACT-GAGACAGTTACGAGAATCGATTCTTATCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2596973 TTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAAAATCATCAATATTATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATC
* * * ** *
2597037 CTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGATTGTTACTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * **
2597102 TGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAATGGCAGGAAAAAAGCCTTTCT
194 TGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT---ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * * *
2597167 TGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATCC
256 TGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCT
** * * * *
2597231 AAAAAAGAATGGGGATTAGTTTGAGTATTTATGTTTGTCTTATTTAAGAGAGAAACTTTGATTCT
320 GGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCT
* * *
2597296 ATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGAGC-CCAAAGCATCAGTTTCATGTATCCTAA
385 ATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGA-CATCAAAGCATCAATTTCATGTATCCTAA
* * *
2597359 GGAAGGGAATGTTTTTTGGCTCTAAC
449 TGAAGGGAATGTGTTTTGGCTCTAAT
* * *
2597385 TCTCGTAAAGAATGGAGATTGTTGCGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* *
2597450 TTAAAGGAAAATAAGGTAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
** * * *
2597515 AATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAAGGAAGGTCATTACTAGAATTCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* *
2597580 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGCAA
196 TTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
** *
2597645 AACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-TCGGGAA
261 AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCT-GGAAA
* *
2597709 AGACAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAACTTTGATTCTATCAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
** * *
2597774 AAACGGTGGAAGGAAAAGTGCTTCTTGTGAC-CCTAAAGCATCAATTTCATGTATCCTAATGAAG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGCGACATC-AAAGCATCAATTTCATGTATCCTAATGAAG
* * *
2597838 GGAATG-GGTTTGTCTCCCAA-
454 GGAATGTGTTTTGGCT-CTAAT
** * * * *
2597858 TCTTATAAAGAAAGGAGATAATTACGAGCA-CTGATGCTTGTCTTATTTAAGGGATGAATTTTGA
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATC-GATGCTTGTCTTATTTAAGGGATGAACTTTGA
* * * * * *
2597922 TTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCAAGAGAAAATCTTCAATTTCTTTTATCC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
* * * * *
2597987 TAATAAGGGGAATGCGTTTATAGTGCCTAATCACAAAATGAAAGAAGATCATTACTAGAATCCAA
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * * *
2598052 GTTTGTCTCGTTTGAGGCACGAACTTAAACTTTATAAAAAATGGTGGGAAAAAAGCCTTTATTGC
195 GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTAT-AAAAATGGTGGGAAAAAAGCCTTTCTTGC
*
2598117 AAAACGAAAGCTTCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAA
259 AAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAA
* * *
2598182 AAGAACGGGGATTAGTATGAGTATTGATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCA
324 AAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCA
* * * * *
2598247 AAAACGGTGGAAGGAAAAGTTTTTCTTGCGACCTCAAAGCATCAATGTCTTGCATCCTGATGAAG
389 AAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAG
* * *
2598312 GAAATGTGTTTTGGCTTCAAAA
454 GGAATGTGTTTTGGC-TCTAAT
* * * * * * * *
2598334 TCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATTCTTATCTTATTCAAGGTATGAAC-ATCA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
2598397 TTTTAAAGGAAAATA-GGCAAAGAAAAGA-TTCCAATGCAAAAGAAAATCATCAATATCATTTAT
65 -TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATGCAAAAGAAAATCATCAATATCATTTAT
* * * * * **
2598460 CCTAATAAGGAGAATATGTTTATAGTTCCTATTCACAAAATGAATGAAGATCGTTGTTAGAATCC
128 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCC
* ** * * *
2598525 AAGTTCATCTCATTTGAAGCATGAACTTAGACTTTGCA-AAAAATGGTGGGAAAAAAGCTTTTCT
193 ATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT--ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * * * *
2598589 TGCGAAACGAAAGCGTTAATATGATGTATCCTAAAGAGAAGACTATGTTTATAGTGCCTTATCCT
256 TGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CT
* * * *
2598654 -GAAAGGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTTTTTAAGAGACAAACTTTAATTCT
320 GGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCT
* * * *
2598718 ATCAAAAACGGTGGAAGGAAAATTTTTTCTTGCGACCTCAAAGCAACAATTTCATGTCTCCTAAT
385 ATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAAT
* *
2598783 GAAGGGAATGAGTTTTGGCT-TCACAA
450 GAAGGGAATGTGTTTTGGCTCT-A-AT
* * * *
2598809 GCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATGCTT-TCTTTTTTTAAGGGATGAACTTTG
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTC-TTATTTAAGGGATGAACTTTG
* *
2598872 ATTTAAAAGAAAATAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATC
64 ATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATC
* * *
2598937 CTAATAAGGAGAATGCGTTTATAGTGCCTAATCACAAAATGAAAGAAGATCATTACTAGAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * * * * *
2599002 CGTTTGTCTCATTTCAGGCATGACCTTAGACTTTA-AAAAATTTGGTGGGAAAAAAGCCTTTCTT
194 TGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAA--TGGTGGGAAAAAAGCCTTTCTT
* * * * *
2599066 GCAAAATGAAAGCATCAAAATGATGTATCCTCATGAGAAGACAATGTTTATAGTGCCTAATTTGG
257 GCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGG
* * * * * *
2599131 AAGAGAATGGCGATTAGTATGAGTTTTCATGTTTGTCTTATTTAAGAGACAAACATTGATTCTGT
322 AAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAT
* * * * *
2599196 CAAAAACGGTGGAAGGAAAAGCTTTTCTTGTGATATCAATGCATCAATGTT--TGTATCTTAATG
387 CAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAAT-TTCATGTATCCTAATG
*
2599259 AAGGGAATGTGTTTTGGCT-TCACAA
451 AAGGGAATGTGTTTTGGCTCT-A-AT
* * * * *
2599284 TCT-TTAAA-AACT-GAGATAGTTACGAGAATCGATTCTGGTCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2599346 TTTAAAGGAAAATAGGGCAAAAAAAAGATTCCCATGCAAAAGAAAATCATCAATATCATTTATCC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
* * * *
2599411 TAATGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTATTAAAATCCAC
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * *
2599476 GTTTGTCTCATTTGAGGCATGAACTTAGACTTTA-AAAAATTTGGTGGGAAAAAAGCCTTTCTTG
195 GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAA--TGGTGGGAAAAAAGCCTTTCTTG
* * * *
2599540 CAAAACGAAAGCATCAAAATGATGTATCCTCATGAGAAGACAATGTTTATAGTGCCTAATTTGGA
258 CAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGA
* * * * * *
2599605 AGAGAATGGCGATTAGTATGAGTTTTCATGTTTGTCTTATTTAAGAGACAAACATTGATTCTGTC
323 AAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATC
* * * ** *
2599670 AAAAACGGTGGAAGGAAAAGCTTTTCTTGTGACATCAATGTGTCAATGTT--TGTATCTTAATGA
388 AAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAAT-TTCATGTATCCTAATGA
*
2599733 AGGGAATGTGTTTTGGCT-TCACAA
452 AGGGAATGTGTTTTGGCTCT-A-AT
* * * * * *
2599757 TCTTG-AAAAAACT-GAGATAGTTACGAGAATCGATTCTGGTCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2599820 TTTAAAGGAAAATAGGGCAAAAAAAAGATTCCCATGCAAAAGAAAATCATCAATATCATTTATCC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
* * * * *
2599885 TAATGAGGTGAATGTGTTTATTGTGCCTAATCACAAAATGAATGAAGATCATTATTAAAATCCAC
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * *
2599950 GTTTGTCTCATTTGAGGCATGAACTTAGACTTTA-AAAAATTTGGTGGGAAAAAAGCCTTTCTTG
195 GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAA--TGGTGGGAAAAAAGCCTTTCTTG
* * * *
2600014 CAAAACGAAAGCATCAAAATGATGTATCCTCATGAGAAGACAATGTTTATAGTGCCTAATTTGGA
258 CAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGA
* * * * * * *
2600079 AGAGAATGGCGATTAGTATGAGTTTTCATGTTTGTTTTATTTAAGAGACAAACATTGATTCTGTC
323 AAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATC
* * * * *
2600144 AAAAACGGTGGAAGGAAAAGCTTTTCTTGTGACATCAATGCGTCAATGTT--TGTATCTTAATGA
388 AAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAAT-TTCATGTATCCTAATGA
*
2600207 AGGGAATGTGTTTTGGCT-TCACAA
452 AGGGAATGTGTTTTGGCTCT-A-AT
* * * * * *
2600231 TCTTG-AAAAAACT-GAGATAGTTACGAGAATCGATTCTGGTCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2600294 TTTAAAGGAAAATAGGGCAAAAAAAAGATTCCCATGCAAAAGAAAATCATCAATATCATTTATCC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
* * *
2600359 TAATGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTATTAAAATCCAT
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * * * * *
2600424 GTTTGTCTCTTTTGAGGCACGAACGTAGACTTTACAAAAAATGGTAGGAAAAAAGCCTTTGTT-A
195 GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTA-TAAAAATGGTGGGAAAAAAGCCTTTCTTGC
* * * * * *
2600488 AGAAATGAAAGCATCAATGTGATGTATCATGAA-GAGAAGACTATGTTTATGGTGCCTAATCCGA
259 A-AAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCTGG
* *
2600552 AAAAGAATGGGGATTAG-ATTGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTA
322 AAAAGAAAGGGGATTAGTA-TGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA
** * * * *
2600616 TCAAAATGGGTGGAAGGAAAAGTTTTTCTTGTGACACCAAAGCATCAATTTAATGTATCCTAAGG
386 TCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATG
* **
2600681 AAGGGAATGTTTTTTGGCTCCGAT
451 AAGGGAATGTGTTTTGGCTCTAAT
* * * * * *
2600705 TCTCGTAAAGAATGGAGATTGTTACGAAAATCGATCCCTGTCTTATTTAAGGGATAAACTATGAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* * * * *
2600770 TTAAAAGAAAATAAGGCAAAGAAAAGATTTTCGTGCAAAAGAAAATCATCAATATTATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
* * * * *
2600835 AATAAGAAGAATGTGTTGATAGTGCCTAATAACAAAATGAATGAAGATTATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* * ** *
2600900 TTTGTCTCATTTGTG-A-CATGAACTTAGACTTTACACAATTTGGTGGGAAAAAAGCCTTTCCTG
196 TTTGTCTC-TTT-TGAAGCACGAACTTAGACTTTATA-AAAATGGTGGGAAAAAAGCCTTTCTTG
* * * * * * *
2600963 CAAAACGAAAGCTTCAATATTATGTATCCTAAAGAGAAAACTATGTTTATAGAGCC-ATATCCT-
258 CAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTA-AT-CTG
*** * * *
2601026 GAAAAGAATTAGGATTAGTAT-ACGTATTCATGTTTGTCTCATTGAAAAGACAAACTTTGATTCT
321 GAAAAGAAAGGGGATTAGTATGA-GTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCT
* * * * * * *
2601090 ATCAAACATGGTGGAAGGAAAATTTTTTCTTGCGACACCAAAGCATCAATTTCATGCATCTTAAG
385 ATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAAT
*
2601155 GAAGGGAATGTGTTTTGGCT-TCGAT
450 GAAGGGAATGTGTTTTGGCTCT-AAT
* * * * * ** *
2601180 TCTCGTAGAGATTGGAGATTGTTACAAGAATCAAAACTTGCCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* * ** * * *
2601245 TTAAAGGAAAATATGGCAAAGAAAAGATTCCCACACCACAGAAAATCATCAATATTATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
* * * * * * *
2601310 AATGAAGTGAATGCGTTTATAGAGCCTAATCACCAAATGAATAAAGATTATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* * * * * **
2601375 TTTGTCTTTTTTGAAGCACGAACTTAGACATTACAAAAAATGGTGAGAAAAAAGTCTTTCTTGTG
196 TTTGTCTCTTTTGAAGCACGAACTTAGACTTTA-TAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* * * * **
2601440 AAATGAAGGCATCAATATGATGTATCGTAATGAAAAGACAATGTTTATGGTGCCTAATCCAGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2601505 AGAATA-GGGATAAGTATGAGCATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAA
325 AGAA-AGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCA
* * ** * *
2601569 AAAACGGGGGAAAGAAAAGTTTTTCTTGCGACCCCAAAACATCAATTTCATGTATCCTAATTAAG
389 AAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAG
* *
2601634 GGAATGTGTTTTGGCTTTACAA
454 GGAATGTGTTTTGGCTCTA-AT
* * * * * *** * * *
2601656 TGTTGAAAAGAACT-GAGACAGTTATGTTTATCAATGCTTGTCTTATATAAGGGATAAACTTTGA
1 TCTCGTAAAGAA-TGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2601720 TTTAAAGGAAAACAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATTATTTATCC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
* ** * * *
2601785 TAATGAGGAGATTGCATTTATAGTGCCTAGTCACAAAATGAATGAAGATCGTTACTATAATCCAT
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * *
2601850 GTTTATCTCATTTGAAGCACGAACTTAGACTTTA-AAAAATTTGGTTGGAAAAAAGCCTTTCTTG
195 GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAA--TGGTGGGAAAAAAGCCTTTCTTG
* * * * *
2601914 CAAAACGAAAGCATCAATACGATGTATCCTAAAGAGAAGACAATATTTATGCTGCCTTATCCT-G
258 CAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CTGG
* *
2601978 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTATGAGACAAACTTTGATTCTAT
322 AAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAT
* *
2602043 CAAAAACGGTGGAAGGAAATGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAATGA
387 CAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGA
*
2602108 AGGGAATGTGTTTTGGCT-TCACAA
452 AGGGAATGTGTTTTGGCTCT-A-AT
* * * * * * * * * *
2602132 TCTTGAAAAGAATTGAGATAGTTATGAGAATCGATTCTTGTCTTATTTATGGTATGAACATCGTT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* *
2602197 TTAAAGGAAAATA-TGCAAAGAAAAGA-TTCCAATGCAAAAGAAAATCATCAATTTCATTTATCC
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATGCAAAAGAAAATCATCAATATCATTTATCC
* * * * *
2602260 CAATGAGGAGAATATGTTTATAGTGCCGAATCGCAAAATGAATGAAGATCATTACTAGAATCCAA
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * * *
2602325 GTTTGTCTCATTTGAAGCACAAACTTAGACTTCACAAAAAATGGTGGGAAAAAAGCCTTTCTTGC
195 GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTA-TAAAAATGGTGGGAAAAAAGCCTTTCTTGC
* * * * * *
2602390 AAAATGTAAGCATCAATACGATGTATCCTAATGAAAAGACAATGATTATGGTGCCTAATCCAGG-
259 AAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CTGGA
* * * * * * * *
2602454 AAAGAATGCGGATTAGTATAATTATTCATGTTTCTCATATTTAAGAGACAAACTTTGATTTTATA
323 AAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATC
* * * * *
2602519 AAAAACAGTGGAAGGAAAAGTTTTTCTTTC-ATCACCAAAGCATCAAATTCATGTATCCTAAGGA
388 AAAAACGGTGGAAGGAAAAGTTTTTCTTGCGA-CATCAAAGCATCAATTTCATGTATCCTAATGA
*
2602583 AGGGAATGTGTTTTGGCT-TCGAT
452 AGGGAATGTGTTTTGGCTCT-AAT
* * * * *
2602606 TCTCGTAAAGATTGGAGATTGTTACGAGAATCAATACTTGACTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* *
2602671 TTAAAGGAAAATAGGGCAAAGAAAAGATTCCCACGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
* * * *
2602736 AATGAGGTGAATGTATTTATAGTGCCTAATCACAAAATCAATGACGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* * * * *
2602801 TTTGTCTCTTTCGAAGCATGAACTTAGACTTTATAAAAAATGGTGAGAATAAAGCCTTTCTTGCG
196 TTTGTCTCTTTTGAAGCACGAACTTAGACTTTAT-AAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2602866 AAACAAAAGCATCAATATGATGTATCATAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * * * *
2602931 AGAATA-GAGATTAGTATGAGTATTCATGTTAGTCTTATTTTAGAGAATAAACTTTCATTCTATC
325 AGAA-AGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAG-ACAAACTTTGATTCTATC
* * * * * * * *
2602995 GAAAACAGTGGAAAGAAAAGTTTTCCTTGTGACACCAAAGCATCAATTTCATATAT-CTGAATAA
388 AAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCT-AATGA
* *
2603059 AAGGAATGTGTTTTGGCTTCACAAT
452 AGGGAATGTGTTTTGGC-TC-TAAT
* *** * * *
2603084 GT-T-GAAAAGAAAAAAGACAGTTACGAGAATCGATGCTTGTCTTATATAAGGGATGAGCTTTGA
1 -TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGA
* *
2603147 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCTATGCAAAAGAAAATCATTAATATCATTTATCC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
* * * *
2603212 TAATGAGGAGAATGCGTTTATAGTGCCTAATCACAAAATGAATGAAAATCATTACTAGTATCCAC
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* ** * *
2603277 GTTTGTCTCATGGGAGGCACGAACTTGGACTTTA-AAAAATTTGGTGGGTAAAAAA-CCTTTCTT
195 GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAA--TGGTGGG-AAAAAAGCCTTTCTT
* * * * * * *
2603340 GCAAAACGAAAGCATCAAAACGATGTATCCTAAAGAGAAGACAATATATATGTTGCCTTATCCT-
257 GCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CTG
* * *
2603404 GAAAAG-AATGGGATTAATATGAGTATTCATGTTTGTCTTATTTATGAGACAAACTTTGATTCTA
321 GAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA
* * * *
2603468 TCAAAAATGGTGGAAGGAAAAGTTTTTCTTGTGACATTAAAGCATCAATGTCATGTATCCTAATG
386 TCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATG
* * *
2603533 AAGGGATTGTGATTTGGCT-TCACAA
451 AAGGGAATGTGTTTTGGCTCT-A-AT
* * * * * * * * * * *
2603558 TCTTGAAAAGAATAGAGATAGTTACGAGAATCTATTCTTATCTTATTTATGGTATGAACATCGTT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
*
2603623 TTAAAGGAAAATA-TGCAAAGAAAAGA-TTCCAATGCAAAAGAAAATCATCAATATCATTTATCC
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATGCAAAAGAAAATCATCAATATCATTTATCC
* * * * * * *
2603686 CAATGAGGAGAATATGTTTATAGTGCCGAATCGCAAAATGAATGAAGATCATGACTAGAGTCCAA
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * * * *
2603751 GTTTGTCTCATTTGGAGCACGAACTTAGACTTT-TCAAAAAATGGTGGGAAAAATGCCTTTCCTA
195 GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTAT--AAAAATGGTGGGAAAAAAGCCTTTCTTG
* * * * * ***
2603815 CGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAGGACTATGTTTATGGTGCCTTATCCAAA
258 CAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGA
* * * * * * *
2603880 AAAGAATGGGGGTTAGTATGAGTATCCATGTTTGCCTTTTTTAAAAGACAAACTTTGATTTTATC
323 AAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATC
* *
2603945 AAAAACGGTGGAAGGGAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTCTCCTAATGAA
388 AAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAA
*
2604010 GGGAATGTGTTTTGGCT-TCACAA
453 GGGAATGTGTTTTGGCTCT-A-AT
* * * * * * *
2604033 TCTTGAAAAGGATTGAGATAGTTACGAGAATC-AGTGCTTGTGTTTTTTAAGAGATGAACTTTGA
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGA-TGCTTGTCTTATTTAAGGGATGAACTTTGA
* * *
2604097 TTTAAA-G--AAT--TG---AG-ATAG--TTCCATGC-AAA-AAAATCATCAATATCTTTTATCC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
** * *
2604149 TAATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATAAATGAAGATCATTACTAGAATCCAC
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * * * *
2604214 ATTTGTCTCATTTGAGGCACGAACCTAGACTTTA-AAAATTTGGTGGGAAAAAAGCCTTTCTTGC
195 GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAA-ATGGTGGGAAAAAAGCCTTTCTTGC
* * * * *
2604278 GAAATGAAAGCATCAATACGATGTATCCTAAAGAGAAGACTTTCCTAAAGAGAAGACTATGTTTG
259 AAAACGAAAGCATCAATATGATGTATCCT-------A-A------T---GAGAAGACAATGTTTA
** * * * * * *
2604343 TATTGCCTTATCTTGAGAAGAATGGGGATTAGTATGAGTATTCATGTTTATCATATTTAAGAGAC
307 TGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGAC
* * * * ** *
2604408 AAACTTTGATTTTATCAAAAATGGTGGAAGCAAAAGTGTTTCTTGCGACCCCATAGCATCAATTT
372 AAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTT
* * * * *
2604473 GACGTATCCTATTGAAGGGAATGTG-TTTGTCTCCCAA-
437 CATGTATCCTAATGAAGGGAATGTGTTTTGGCT-CTAAT
* * * *
2604510 TCTCATAAAGAAAGGAGATTGTTACGAGAATTGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
* * *
2604575 TTTAAGGAAAATAGGGCAAAGAAAAGATTTACATGCAAAAGAAAATCATCAATATCATTCATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
* * * * * * *
2604640 AATCAGGAGACTGTGTTTATGGTACCTAATCCCAAAATGAATGAAGATCATTACTAGAATCTAAG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* * * * *
2604705 TTTGTCTCATTTGAGGCACGAACTCAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCG
196 TTTGTCTCTTTTGAAGCACGAACTTAGACTTTA-TAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* **
2604770 AAATGAAAGCATCAATATGATGTATTTTGAA-GAGAAGA-ATATGTTTATGGTGC
260 AAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACA-ATGTTTATGGTGC
2604823 TGTATCTTGA
Statistics
Matches: 16943, Mismatches: 1997, Indels: 702
0.86 0.10 0.04
Matches are distributed among these distances:
461 4 0.00
462 48 0.00
463 135 0.01
464 8 0.00
465 143 0.01
466 145 0.01
467 93 0.01
468 2 0.00
469 1 0.00
470 13 0.00
471 824 0.05
472 519 0.03
473 1462 0.09
474 5198 0.31
475 4525 0.27
476 1719 0.10
477 795 0.05
478 966 0.06
479 161 0.01
480 3 0.00
482 1 0.00
484 1 0.00
485 3 0.00
486 3 0.00
488 7 0.00
489 3 0.00
490 107 0.01
491 50 0.00
492 4 0.00
ACGTcount: A:0.37, C:0.13, G:0.19, T:0.31
Consensus pattern (474 bp):
TCTCGTAAAGAATGGAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
TTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAAA
GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
AACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGGG
AATGTGTTTTGGCTCTAAT
Found at i:2587713 original size:157 final size:154
Alignment explanation
Indices: 2585182--2598175 Score: 1673
Period size: 159 Copynumber: 82.2 Consensus size: 154
2585172 AATTTCTTTA
* * * *
2585182 ATCCTAATGAGGGGAATGTGTTTGTAGTGCCTAA-TCACAAAATGAAAGAAGATTATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * * * * * *
2585246 TCCAAGTTTGTCCTATTTGAGGCACGAACTTAAACTTTATAAAAAATGGTGGGAAAAAAGCCTTT
64 TTCATGTTTGT-CT-TTTTAAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
* *
2585311 GTTGCAAAACGAAAGCATCAATATGATGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * ** ** * *
2585340 ATCCTAATGAGATGACA-ATGTTTATGGTGCCTAA-TCTGGAAAAGAATGGGGATTAGTA-TGAG
1 ATCCTAATGAGA-GA-ATGTGTTTATAGTGCCTAATTC-ACAAAAGAATGAAGATCATTACT-AG
* * * ** * * * *
2585402 TATTCATGTTTGTCTTATTTAAGAGACAAACTTTGCTTCTATCACAAACGGT-GGAAGGAAAAGT
62 AATTCATGTTTGTCTT-TTTAAG-CACGAACTCAGATT-TATCAAAAATGGTAGGAA--AAAAGC
* * * * * *
2585466 TTTTCTTGCGACATC-AAAGCATCAATGTCTTGC
122 CTTTCTTGC-AAAACGAAAGCATCAATATCATGT
* * * ** *
2585499 ATCCTAATGA-AGGAAATGTGTTT-TGGCTTCATAA-TCTTGAAAAGAACTG-AGAT-AGTTACG
1 ATCCTAATGAGA-G-AATGTGTTTATAG-TGCCTAATTC-ACAAAAGAA-TGAAGATCA-TTACT
* * * * * *
2585559 AGAA-TCGAT-TCTTGTCTTATTTAAGGTATGAACATC-GTTTTA-AAGGAAAAT--TTGCAAAG
60 AGAATTC-ATGT-TTGTCTT-TTTAA-GCACGAAC-TCAGATTTATCA--AAAATGGTAG-GAA-
* * * * *
2585618 AAAAG-ATTCCAATGCAAAA-GAAAATCATCAATATCATTT
116 AAAAGCCTTTC-TTGCAAAACG-AAAGCATCAATATCATGT
* * * * *
2585657 ATCCTAATAAGGACAATATGTTTATAGTGCCT-ATTCACAAAATGAATGAAGATCGTTGCTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * * * * * *
2585721 TCCAAGTTCATCTCATTTGAAGCACGAACTTAGACTTTA-CAAAAAAATGGTGGGAAAAAAGCTT
64 TTCATGTT--TGTCTTTTTAAGCACGAACTCAGA-TTTATC--AAAAATGGTAGGAAAAAAGCCT
* * * *
2585785 TTCTTGCGAAACGAAAGCGTTAATATGATGT
124 TTCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * ** * ** * * *
2585816 ATCCTAAAGAGAAGACTATGTTTATGGTGCCTTA-TCTTGAAAGGAATGGGGATTAGTA-TGAGT
1 ATCCTAATGAG-AGAATGTGTTTATAGTGCCTAATTC-ACAAAAGAATGAAGATCATTACT-AGA
* * * * *
2585879 ATTCATGTTTGTCTTATTTAAGAGACAAACTTTA-ATTCTATCAAAAACGGT-GGAAAGAAAAGT
63 ATTCATGTTTGTCTT-TTTAAG-CACGAAC-TCAGATT-TATCAAAAATGGTAGG-AA-AAAAGC
* * * * * *
2585942 TTTTCTTGCGACACCAAAGCATCAATTTCATAT
122 CTTTCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * ** *
2585975 ATCCTAAGGAAGGGAATGT-TTT-TTG-GCTCTAATTCTCGTAAAGAATGGAGATTGTTACAAGA
1 ATCCTAATG-AGAGAATGTGTTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACTAGA
** ** *** * *
2586037 A-TCGATGCCTGTCTTATTTAAGGGCTGAACTTTCATTTA-AAGGAAAATAGG--GCAAAGAAAA
63 ATTC-ATGTTTGTCTT-TTTAAGCAC-GAACTCAGATTTATCA--AAAAT-GGTAG-GAA-AAAA
* * * * *
2586098 G-ATTTCCATGCAAAA-GAAAATCATTAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
* **
2586133 ATCCTAATGTGGAGAATGCATTTATAGTGCCTAA-TCACAAAATGAATGAAGATCATTACTAGAA
1 ATCCTAATG-AGAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * *
2586197 TCCATGTTTGTCTCTTTTGAAGCACGAATTTCA-ACTTTAT-AAAAATGGTGGGAAAATAGCCTT
64 TTCATGTTTGTCT-TTTT-AAGCACGAA-CTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTT
* * *
2586260 TCTTGCAAAATGAAAGCATCGATATGATGT
125 TCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * ** * * *
2586290 ATCCTAATGAGAAGACA-ATGTTTCTGGTGCATAATCCAAAAAAGAATGGGGATTAGTA-TGAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTCACAAAAGAATGAAGATCATTACT-AGA
* * * ** ** *
2586353 TTTCATGTTTATCTTATTTATGAG-ACAAACTTTGATTCTATCAAAAAT-GTTCGAAGGAAAAGT
63 ATTCATGTTTGTCTT-TTTA--AGCACGAACTCAGATT-TATCAAAAATGGTAGGAA--AAAAGC
* * * *
2586416 TTTTCTTG--TAACGTCAAAGCATCATTGTCATGT
122 CTTTCTTGCAAAACG--AAAGCATCAATATCATGT
* * * * * * **
2586449 ATCCTAATAAGGGGAATGTGTTT-TGGCTTCATAATCCTGAAAAGAACTG-AGA-CAGTTA-TAA
1 ATCCTAATGA-GAGAATGTGTTTATAG-TGCCTAATTCACAAAAGAA-TGAAGATCA-TTACT-A
* ** * ** *
2586510 GAA-TCGAT-TCTTGTCTTATTTAAGGTATAAACAT-TGATTTATTGGAAAATAGG--GCAAAGA
61 GAATTC-ATGT-TTGTCTT-TTTAA-GCACGAAC-TCAGATTTA-TCAAAAAT-GGTAG-GAA-A
* * ** *
2586570 AAAG-ATTTCCATGCAAAA-GAAAATAATCAATATCATTT
117 AAAGCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
* * * * *
2586608 ATCCAAATGAGGAGAATGCGTTTGTAGTGCCTAA-TCAAAAAATGAAAGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * * * *
2586672 TCCACGTTTG-------AGGCAGGAACTTAGACTTTA--AAAAATTTGGTGGGAAAAAAGCCTTT
64 TTCATGTTTGTCTTTTTAAGCACGAACTCAGA-TTTATCAAAAA--TGGTAGGAAAAAAGCCTTT
* *
2586728 CTTGCAAAACGAAAGCATCCATATGATGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * * * *
2586757 ATCCTAATGAGAAGACA-ATATTTATGGTGCCTAATCCAGAAAAGAATG-GGATTAGTA-TGAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTCACAAAAGAATGAAGATCATTACT-AGA
* * * * ** * * * **
2586819 ATTCGTGTTTATCTTATTTAAGAGACAAACTTTGATTCTGTTAAAAACGGT-GGAAGGAAAAGTT
63 ATTCATGTTTGTCTT-TTTAAG-CACGAACTCAGATT-TATCAAAAATGGTAGGAA--AAAAGCC
* * * *
2586883 TTTCTTGC-AACCTCAAAGCATCAATTTCATAT
123 TTTCTTGCAAAAC-GAAAGCATCAATATCATGT
* * * * * * *
2586915 ATCCTAATGAAGGGAATGTGTTT-T-GGGTCC-GATTCTCATAAACAATGGAGA-CTATTACAAG
1 ATCCTAATG-AGAGAATGTGTTTATAGTG-CCTAATTCACA-AAAGAATGAAGATC-ATTACTAG
** * * * ** * *
2586976 AA-TCGATACTTGTCCTATTTAAGGGATGAACTTTGATTTA-AAGGAAAAT--AAGGCAAAGAAA
62 AATTC-ATGTTTGT-CTTTTTAA-GCACGAACTCAGATTTATCA--AAAATGGTAGG--AA-AAA
* * * *
2587037 AG-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
119 AGCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
* * * * * * *
2587073 ATCCTAATGAGGAGAATATGTTTTTACTTCCTAA---ACATAATGAAAGAATATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACA-AAAGAATGAAGATCATTACTAGAA
* * * * *
2587135 TCCATGCTTGTCTCTTTTGAAGCACAAACTTAGAGTTTA-CAAAAAATGGTGGGAAAAAAGCCTT
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATC-AAAAATGGTAGGAAAAAAGCCTT
* * * *
2587199 TCTTCCAGAACGAAAGCATCAATGTGATGT
125 TCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * *
2587229 ATCCTAATGAGAAGACA-ATGTTTATGGTGCATAA-TCTAGAAAAGAAT-AGGGATTAGTA-TGA
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTC-ACAAAAGAATGA-AGATCATTACT-A
* * ** * *
2587290 GTATTCATGTTTGTCTTATTTATGAG-ACAAACTTTGATTCTATCAAAAA-CGTTGGAAGGAAAA
61 GAATTCATGTTTGTCTT-TTTA--AGCACGAACTCAGATT-TATCAAAAATGGTAGGAA--AAAA
** * * *
2587353 GTTTTTCTTG--TAACGTCAAAGCATCATTGTCATGT
120 GCCTTTCTTGCAAAACG--AAAGCATCAATATCATGT
* * * * * ** *
2587388 ATCCTAATAAGGGGAATGTGTTT-TGGCTTCATAA-TCTTGAAAAGAACTG-AGA-CAGTTACAA
1 ATCCTAATGA-GAGAATGTGTTTATAG-TGCCTAATTC-ACAAAAGAA-TGAAGATCA-TTACTA
* ** * ** * *
2587449 GAA-TCAAT-TCTTGTCTTATTTAAGGTATAAACAT-TGATTTAATGGAACATAGG--GCAAAGA
61 GAATTC-ATGT-TTGTCTT-TTTAA-GCACGAAC-TCAGATTT-ATCAAAAAT-GGTAG-GAA-A
* * * *
2587509 AAAG--TTTCCCATGCAAAA-GAAAATCATCAATATTATTT
117 AAAGCCTTT--CTTGCAAAACG-AAAGCATCAATATCATGT
*
2587547 ATCCTAATGAGCTGAATGTGTTTATAGTGCCTAA-TCACAAAATGAATGAAGATCATTACTAGAA
1 ATCCTAATGAG-AGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
2587611 TTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTAGGAAAAAAGCCTTT
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
***
2587675 CTTGCAAAACGAAAGCATCAATATGGCGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * *** * ** * * *
2587704 ATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATTTGGAAAAGAAAGGGGATTAGTA-TGAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTCACAAAAGAATGAAGATCATTACT-AGA
* * ** *
2587767 ATTCATGTTTGTCATATTTAAGAGAC-AAGCTTTGATTCTATCAAAAATGGT-GGAAAGAAAAGT
63 ATTCATGTTTGTC-TTTTTAAG-CACGAA-CTCAGATT-TATCAAAAATGGTAGG-AA-AAAAGC
* * * * * *
2587830 TTTTCTTGCGACACAAAAGCATCAGTTTCATGT
122 CTTTCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * * ** *
2587863 ATCCTAAGGA-AGGGAT-TGCTTT-TTG-GCTCTAATTCTCGTAAAGGATGGAGATTGTTACGAG
1 ATCCTAATGAGA-GAATGTG-TTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACTAG
*** * ** * * * * *
2587924 AA-TCGATACCTGTCTTATTTAAGGGATAAACTTTA-ATTTAAATGAAAATAGGGCA-AAAAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAAC-TCAGATTT--ATCAAAA-ATGGTAGGAAAAAA
* * * *
2587986 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
*
2588021 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * *
2588085 TCCATGTTTGTTCCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTGGGAAAAAAGCCTTT
64 TTCATGTTTG-T-CTTTTTAAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
**
2588149 CTTGCAAAACGAAAGCATCAATATGGTGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * * ** * ** * * * *
2588178 ATTCTAATGAGAAGACA-ATGTTTATGGTGCCTAA-TCTGGAAAAGAAAGGGGATTAGTATTAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTC-ACAAAAGAATGAAGATCATTACTAGA
* ** * * *
2588241 ATTCATGTTTGTCTTATTTAGGAG-ACAAACTTTGATTCTATAAAAAACGGT-GGAAGGAAAAGT
63 ATTCATGTTTGTCTT-TTTA--AGCACGAACTCAGATT-TATCAAAAATGGTAGGAA--AAAAGC
* * * * * *
2588304 TTTTCTTGTGACATC-AAAGCGTCAATGTCATGT
122 CTTTCTTG-CAAAACGAAAGCATCAATATCATGT
* * * * * * ** *
2588337 AACTTAATGAAGGGAATGTGTTT-TGGCTTCATAA-TCTTGAAAAGAACTG-AGA-CAGTTACGA
1 ATCCTAATG-AGAGAATGTGTTTATAG-TGCCTAATTC-ACAAAAGAA-TGAAGATCA-TTACTA
* * * * * *
2588398 GAA-TCGAT-TCTTATCTTATTTAAGGTATGAACAT-TGATTTA-AAGGAAAATAGG--GCAAAG
61 GAATTC-ATGT-TTGTCTT-TTTAA-GCACGAAC-TCAGATTTATCA--AAAAT-GGTAG-GAA-
* * *
2588457 AAAAG--TTTCTTATGCAAAA-GAAAATCATCAATATTATTT
116 AAAAGCCTTTC-T-TGCAAAACG-AAAGCATCAATATCATGT
* * * ** *
2588496 ATCCTATTGAGGTGAATGTGTTTATAGTGCCTAA-TCACAAAATAAATGAAGATTGTTACTAAAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * *
2588560 TCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTA-CAAAAAAAATGGCAGGAAAAAAGCC
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATC---AAAAATGGTAGGAAAAAAGCC
* * *
2588624 TTTCTTGCGAAATGAAAGCATCAATATGATGT
123 TTTCTTGCAAAACGAAAGCATCAATATCATGT
* * ** * * * ** *
2588656 ATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATCCA-AAAAGGAAAGGGGATTAGTT--TGA
1 ATCCT-AATGAG-AGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCA-TTACT-A
* * ** *
2588717 GTATTCATGTTTGTCTTATTTAAG-AGAGAAACTTTGATTCTATC-AAAACGGT-GGAAAGAAAA
61 GAATTCATGTTTGTCTT-TTTAAGCA-CG-AACTCAGATT-TATCAAAAATGGTAGG-AA-AAAA
** * ** * * *
2588779 GTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGT
120 GCCTTTCTTGCAAAACGAAAGCATCAATATCATGT
** * * * * * ** *
2588814 ATCCTAAAAAAGGGAAT-T-TTT-TTG-GCTCTAATTCTCGTAAAGAATGGAGATTGTTA-TGGG
1 ATCCT-AATGAGAGAATGTGTTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACT-AG
** * * ** * * *
2588874 AA-TCGATGCCTGTCTTATTTAAGGGATGAACTTTGATTTA-AAGGAAAAT--AAGCAAAGAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAACTCAGATTTATCA--AAAATGGTAG-GAA-AAAA
* * * *
2588935 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
** *
2588970 ATCCTAATGAGGAGAATGCATTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
2589034 TTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTAGGAAAAAAGCCTTT
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
***
2589098 CTTGCAAAACGAAAGCATCAATATGGCGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * *** * ** * * *
2589127 ATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATTTGGAAAAGAAAGGGGATTAGTA-TGAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTCACAAAAGAATGAAGATCATTACT-AGA
* * ** *
2589190 ATTCATGTTTGTCATATTTAAGAGAC-AAGCTTTGATTCTATCAAAAATGGT-GGAAAGAAAAGT
63 ATTCATGTTTGTC-TTTTTAAG-CACGAA-CTCAGATT-TATCAAAAATGGTAGG-AA-AAAAGC
* * * * * *
2589253 TTTTCTTGCGACACAAAAGCATCAGTTTCATGT
122 CTTTCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * * ** *
2589286 ATCCTAAGGA-AGGGAT-TGCTTT-TTG-GCTCTAATTCTCGTAAAGGATGGAGATTGTTACGAG
1 ATCCTAATGAGA-GAATGTG-TTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACTAG
*** * ** * * * * *
2589347 AA-TCGATACCTGTCTTATTTAAGGGATAAACTTTA-ATTTAAATGAAAATAGGGCA-AAAAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAAC-TCAGATTT--ATCAAAA-ATGGTAGGAAAAAA
* * * *
2589409 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
*
2589444 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * *
2589508 TCCATGTTTGTTCCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTGGGAAAAAAGCCTTT
64 TTCATGTTTG-T-CTTTTTAAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
**
2589572 CTTGCAAAACGAAAGCATCAATATGGTGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * * ** * ** * * * *
2589601 ATTCTAATGAGAAGACA-ATGTTTATGGTGCCTAA-TCTGGAAAAGAAAGGGGATTAGTATTAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTC-ACAAAAGAATGAAGATCATTACTAGA
* ** * * *
2589664 ATTCATGTTTGTCTTATTTAGGAG-ACAAACTTTGATTCTATAAAAAACGGT-GGAAGGAAAAGT
63 ATTCATGTTTGTCTT-TTTA--AGCACGAACTCAGATT-TATCAAAAATGGTAGGAA--AAAAGC
* * * * * *
2589727 TTTTCTTGTGACATC-AAAGCGTCAATGTCATGT
122 CTTTCTTG-CAAAACGAAAGCATCAATATCATGT
* * * * * * ** *
2589760 AACTTAATGAAGGGAATGTGTTT-TGGCTTCATAA-TCTTGAAAAGAACTG-AGA-CAGTTACGA
1 ATCCTAATG-AGAGAATGTGTTTATAG-TGCCTAATTC-ACAAAAGAA-TGAAGATCA-TTACTA
* * * * * *
2589821 GAA-TCGAT-TCTTATCTTATTTAAGGTATGAACAT-TGATTTA-AAGGAAAATAGG--GCAAAG
61 GAATTC-ATGT-TTGTCTT-TTTAA-GCACGAAC-TCAGATTTATCA--AAAAT-GGTAG-GAA-
* * *
2589880 AAAAG--TTTCTTATGCAAAA-GAAAATCATCAATATTATTT
116 AAAAGCCTTTC-T-TGCAAAACG-AAAGCATCAATATCATGT
* * * ** *
2589919 ATCCTATTGAGGTGAATGTGTTTATAGTGCCTAA-TCACAAAATAAATGAAGATTGTTACTAAAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * *
2589983 TCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTA-CAAAAAAAATGGCAGGAAAAAAGCC
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATC---AAAAATGGTAGGAAAAAAGCC
* * *
2590047 TTTCTTGCGAAATGAAAGCATCAATATGATGT
123 TTTCTTGCAAAACGAAAGCATCAATATCATGT
* * ** * * * ** *
2590079 ATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATCCA-AAAAGGAAAGGGGATTAGTT--TGA
1 ATCCT-AATGAG-AGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCA-TTACT-A
* * ** *
2590140 GTATTCATGTTTGTCTTATTTAAG-AGAGAAACTTTGATTCTATC-AAAACGGT-GGAAAGAAAA
61 GAATTCATGTTTGTCTT-TTTAAGCA-CG-AACTCAGATT-TATCAAAAATGGTAGG-AA-AAAA
** * ** * * *
2590202 GTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGT
120 GCCTTTCTTGCAAAACGAAAGCATCAATATCATGT
** * * * * * ** *
2590237 ATCCTAAAAAAGGGAAT-T-TTT-TTG-GCTCTAATTCTCGTAAAGAATGGAGATTGTTA-TGGG
1 ATCCT-AATGAGAGAATGTGTTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACT-AG
** * * ** * * *
2590297 AA-TCGATGCCTGTCTTATTTAAGGGATGAACTTTGATTTA-AAGGAAAAT--AAGCAAAGAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAACTCAGATTTATCA--AAAATGGTAG-GAA-AAAA
* * * *
2590358 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
** *
2590393 ATCCTAATGAGGAGAATGCATTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
2590457 TTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTAGGAAAAAAGCCTTT
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
***
2590521 CTTGCAAAACGAAAGCATCAATATGGCGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * *** * ** * * *
2590550 ATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATTTGGAAAAGAAAGGGGATTAGTA-TGAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTCACAAAAGAATGAAGATCATTACT-AGA
* * ** *
2590613 ATTCATGTTTGTCATATTTAAGAGAC-AAGCTTTGATTCTATCAAAAATGGT-GGAAAGAAAAGT
63 ATTCATGTTTGTC-TTTTTAAG-CACGAA-CTCAGATT-TATCAAAAATGGTAGG-AA-AAAAGC
* * * * * *
2590676 TTTTCTTGCGACACAAAAGCATCAGTTTCATGT
122 CTTTCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * * ** *
2590709 ATCCTAAGGA-AGGGAT-TGCTTT-TTG-GCTCTAATTCTCGTAAAGGATGGAGATTGTTACGAG
1 ATCCTAATGAGA-GAATGTG-TTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACTAG
*** * ** * * * * *
2590770 AA-TCGATACCTGTCTTATTTAAGGGATAAACTTTA-ATTTAAATGAAAATAGGGCA-AAAAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAAC-TCAGATTT--ATCAAAA-ATGGTAGGAAAAAA
* * * *
2590832 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
*
2590867 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * *
2590931 TCCATGTTTGTTCCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTGGGAAAAAAGCCTTT
64 TTCATGTTTG-T-CTTTTTAAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
**
2590995 CTTGCAAAACGAAAGCATCAATATGGTGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * * ** * ** * * * *
2591024 ATTCTAATGAGAAGACA-ATGTTTATGGTGCCTAA-TCTGGAAAAGAAAGGGGATTAGTATTAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTC-ACAAAAGAATGAAGATCATTACTAGA
* ** * * *
2591087 ATTCATGTTTGTCTTATTTAGGAG-ACAAACTTTGATTCTATAAAAAACGGT-GGAAGGAAAAGT
63 ATTCATGTTTGTCTT-TTTA--AGCACGAACTCAGATT-TATCAAAAATGGTAGGAA--AAAAGC
* * * * * *
2591150 TTTTCTTGTGACATC-AAAGCGTCAATGTCATGT
122 CTTTCTTG-CAAAACGAAAGCATCAATATCATGT
* * * * * * ** *
2591183 AACTTAATGAAGGGAATGTGTTT-TGGCTTCATAA-TCTTGAAAAGAACTG-AGA-CAGTTACGA
1 ATCCTAATG-AGAGAATGTGTTTATAG-TGCCTAATTC-ACAAAAGAA-TGAAGATCA-TTACTA
* * * * * *
2591244 GAA-TCGAT-TCTTATCTTATTTAAGGTATGAACAT-TGATTTA-AAGGAAAATAGG--GCAAAG
61 GAATTC-ATGT-TTGTCTT-TTTAA-GCACGAAC-TCAGATTTATCA--AAAAT-GGTAG-GAA-
* * *
2591303 AAAAG--TTTCTTATGCAAAA-GAAAATCATCAATATTATTT
116 AAAAGCCTTTC-T-TGCAAAACG-AAAGCATCAATATCATGT
* * * ** *
2591342 ATCCTATTGAGGTGAATGTGTTTATAGTGCCTAA-TCACAAAATAAATGAAGATTGTTACTAAAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * *
2591406 TCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTA-CAAAAAAAATGGCAGGAAAAAAGCC
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATC---AAAAATGGTAGGAAAAAAGCC
* * *
2591470 TTTCTTGCGAAATGAAAGCATCAATATGATGT
123 TTTCTTGCAAAACGAAAGCATCAATATCATGT
* * ** * * * ** *
2591502 ATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATCCA-AAAAGGAAAGGGGATTAGTT--TGA
1 ATCCT-AATGAG-AGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCA-TTACT-A
* * ** *
2591563 GTATTCATGTTTGTCTTATTTAAG-AGAGAAACTTTGATTCTATC-AAAACGGT-GGAAAGAAAA
61 GAATTCATGTTTGTCTT-TTTAAGCA-CG-AACTCAGATT-TATCAAAAATGGTAGG-AA-AAAA
** * ** * * *
2591625 GTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGT
120 GCCTTTCTTGCAAAACGAAAGCATCAATATCATGT
** * * * * * ** *
2591660 ATCCTAAAAAAGGGAAT-T-TTT-TTG-GCTCTAATTCTCGTAAAGAATGGAGATTGTTA-TGGG
1 ATCCT-AATGAGAGAATGTGTTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACT-AG
** * * ** * * *
2591720 AA-TCGATGCCTGTCTTATTTAAGGGATGAACTTTGATTTA-AAGGAAAAT--AAGCAAAGAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAACTCAGATTTATCA--AAAATGGTAG-GAA-AAAA
* * * *
2591781 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
** *
2591816 ATCCTAATGAGGAGAATGCATTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
2591880 TTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTAGGAAAAAAGCCTTT
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
***
2591944 CTTGCAAAACGAAAGCATCAATATGGCGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * *** * ** * * *
2591973 ATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATTTGGAAAAGAAAGGGGATTAGTA-TGAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTCACAAAAGAATGAAGATCATTACT-AGA
* * ** *
2592036 ATTCATGTTTGTCATATTTAAGAGAC-AAGCTTTGATTCTATCAAAAATGGT-GGAAAGAAAAGT
63 ATTCATGTTTGTC-TTTTTAAG-CACGAA-CTCAGATT-TATCAAAAATGGTAGG-AA-AAAAGC
* * * * * *
2592099 TTTTCTTGCGACACAAAAGCATCAGTTTCATGT
122 CTTTCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * * ** *
2592132 ATCCTAAGGA-AGGGAT-TGCTTT-TTG-GCTCTAATTCTCGTAAAGGATGGAGATTGTTACGAG
1 ATCCTAATGAGA-GAATGTG-TTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACTAG
*** * ** * * * * *
2592193 AA-TCGATACCTGTCTTATTTAAGGGATAAACTTTA-ATTTAAATGAAAATAGGGCA-AAAAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAAC-TCAGATTT--ATCAAAA-ATGGTAGGAAAAAA
* * * *
2592255 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
*
2592290 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * *
2592354 TCCATGTTTGTTCCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTGGGAAAAAAGCCTTT
64 TTCATGTTTG-T-CTTTTTAAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
**
2592418 CTTGCAAAACGAAAGCATCAATATGGTGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * * ** * ** * * * *
2592447 ATTCTAATGAGAAGACA-ATGTTTATGGTGCCTAA-TCTGGAAAAGAAAGGGGATTAGTATTAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTC-ACAAAAGAATGAAGATCATTACTAGA
* ** * * *
2592510 ATTCATGTTTGTCTTATTTAGGAG-ACAAACTTTGATTCTATAAAAAACGGT-GGAAGGAAAAGT
63 ATTCATGTTTGTCTT-TTTA--AGCACGAACTCAGATT-TATCAAAAATGGTAGGAA--AAAAGC
* * * * * *
2592573 TTTTCTTGTGACATC-AAAGCGTCAATGTCATGT
122 CTTTCTTG-CAAAACGAAAGCATCAATATCATGT
* * * * * * ** *
2592606 AACTTAATGAAGGGAATGTGTTT-TGGCTTCATAA-TCTTGAAAAGAACTG-AGA-CAGTTACGA
1 ATCCTAATG-AGAGAATGTGTTTATAG-TGCCTAATTC-ACAAAAGAA-TGAAGATCA-TTACTA
* * * * * *
2592667 GAA-TCGAT-TCTTATCTTATTTAAGGTATGAACAT-TGATTTA-AAGGAAAATAGG--GCAAAG
61 GAATTC-ATGT-TTGTCTT-TTTAA-GCACGAAC-TCAGATTTATCA--AAAAT-GGTAG-GAA-
* * *
2592726 AAAAG--TTTCTTATGCAAAA-GAAAATCATCAATATTATTT
116 AAAAGCCTTTC-T-TGCAAAACG-AAAGCATCAATATCATGT
* * * ** *
2592765 ATCCTATTGAGGTGAATGTGTTTATAGTGCCTAA-TCACAAAATAAATGAAGATTGTTACTAAAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * *
2592829 TCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTA-CAAAAAAAATGGCAGGAAAAAAGCC
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATC---AAAAATGGTAGGAAAAAAGCC
* * *
2592893 TTTCTTGCGAAATGAAAGCATCAATATGATGT
123 TTTCTTGCAAAACGAAAGCATCAATATCATGT
* * ** * * * ** *
2592925 ATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATCCA-AAAAGGAAAGGGGATTAGTT--TGA
1 ATCCT-AATGAG-AGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCA-TTACT-A
* * ** *
2592986 GTATTCATGTTTGTCTTATTTAAG-AGAGAAACTTTGATTCTATC-AAAACGGT-GGAAAGAAAA
61 GAATTCATGTTTGTCTT-TTTAAGCA-CG-AACTCAGATT-TATCAAAAATGGTAGG-AA-AAAA
** * ** * * *
2593048 GTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGT
120 GCCTTTCTTGCAAAACGAAAGCATCAATATCATGT
** * * * * * ** *
2593083 ATCCTAAAAAAGGGAAT-T-TTT-TTG-GCTCTAATTCTCGTAAAGAATGGAGATTGTTA-TGGG
1 ATCCT-AATGAGAGAATGTGTTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACT-AG
** * * ** * * *
2593143 AA-TCGATGCCTGTCTTATTTAAGGGATGAACTTTGATTTA-AAGGAAAAT--AAGCAAAGAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAACTCAGATTTATCA--AAAATGGTAG-GAA-AAAA
* * * *
2593204 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
** *
2593239 ATCCTAATGAGGAGAATGCATTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
2593303 TTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTAGGAAAAAAGCCTTT
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
***
2593367 CTTGCAAAACGAAAGCATCAATATGGCGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * *** * ** * * *
2593396 ATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATTTGGAAAAGAAAGGGGATTAGTA-TGAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTCACAAAAGAATGAAGATCATTACT-AGA
* * ** *
2593459 ATTCATGTTTGTCATATTTAAGAGAC-AAGCTTTGATTCTATCAAAAATGGT-GGAAAGAAAAGT
63 ATTCATGTTTGTC-TTTTTAAG-CACGAA-CTCAGATT-TATCAAAAATGGTAGG-AA-AAAAGC
* * * * * *
2593522 TTTTCTTGCGACACAAAAGCATCAGTTTCATGT
122 CTTTCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * * ** *
2593555 ATCCTAAGGA-AGGGAT-TGCTTT-TTG-GCTCTAATTCTCGTAAAGGATGGAGATTGTTACGAG
1 ATCCTAATGAGA-GAATGTG-TTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACTAG
*** * ** * * * * *
2593616 AA-TCGATACCTGTCTTATTTAAGGGATAAACTTTA-ATTTAAATGAAAATAGGGCA-AAAAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAAC-TCAGATTT--ATCAAAA-ATGGTAGGAAAAAA
* * * *
2593678 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
*
2593713 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * *
2593777 TCCATGTTTGTTCCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTGGGAAAAAAGCCTTT
64 TTCATGTTTG-T-CTTTTTAAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
**
2593841 CTTGCAAAACGAAAGCATCAATATGGTGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * * ** * ** * * * *
2593870 ATTCTAATGAGAAGACA-ATGTTTATGGTGCCTAA-TCTGGAAAAGAAAGGGGATTAGTATTAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTC-ACAAAAGAATGAAGATCATTACTAGA
* ** * * *
2593933 ATTCATGTTTGTCTTATTTAGGAG-ACAAACTTTGATTCTATAAAAAACGGT-GGAAGGAAAAGT
63 ATTCATGTTTGTCTT-TTTA--AGCACGAACTCAGATT-TATCAAAAATGGTAGGAA--AAAAGC
* * * * * *
2593996 TTTTCTTGTGACATC-AAAGCGTCAATGTCATGT
122 CTTTCTTG-CAAAACGAAAGCATCAATATCATGT
* * * * * * ** *
2594029 AACTTAATGAAGGGAATGTGTTT-TGGCTTCATAA-TCTTGAAAAGAACTG-AGA-CAGTTACGA
1 ATCCTAATG-AGAGAATGTGTTTATAG-TGCCTAATTC-ACAAAAGAA-TGAAGATCA-TTACTA
* * * * * *
2594090 GAA-TCGAT-TCTTATCTTATTTAAGGTATGAACAT-TGATTTA-AAGGAAAATAGG--GCAAAG
61 GAATTC-ATGT-TTGTCTT-TTTAA-GCACGAAC-TCAGATTTATCA--AAAAT-GGTAG-GAA-
* * *
2594149 AAAAG--TTTCTTATGCAAAA-GAAAATCATCAATATTATTT
116 AAAAGCCTTTC-T-TGCAAAACG-AAAGCATCAATATCATGT
* * * ** *
2594188 ATCCTATTGAGGTGAATGTGTTTATAGTGCCTAA-TCACAAAATAAATGAAGATTGTTACTAAAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * *
2594252 TCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTA-CAAAAAAAATGGCAGGAAAAAAGCC
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATC---AAAAATGGTAGGAAAAAAGCC
* * *
2594316 TTTCTTGCGAAATGAAAGCATCAATATGATGT
123 TTTCTTGCAAAACGAAAGCATCAATATCATGT
* * ** * * * ** *
2594348 ATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATCCA-AAAAGGAAAGGGGATTAGTT--TGA
1 ATCCT-AATGAG-AGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCA-TTACT-A
* * ** *
2594409 GTATTCATGTTTGTCTTATTTAAG-AGAGAAACTTTGATTCTATC-AAAACGGT-GGAAAGAAAA
61 GAATTCATGTTTGTCTT-TTTAAGCA-CG-AACTCAGATT-TATCAAAAATGGTAGG-AA-AAAA
** * ** * * *
2594471 GTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGT
120 GCCTTTCTTGCAAAACGAAAGCATCAATATCATGT
** * * * * * ** *
2594506 ATCCTAAAAAAGGGAAT-T-TTT-TTG-GCTCTAATTCTCGTAAAGAATGGAGATTGTTA-TGGG
1 ATCCT-AATGAGAGAATGTGTTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACT-AG
** * * ** * * *
2594566 AA-TCGATGCCTGTCTTATTTAAGGGATGAACTTTGATTTA-AAGGAAAAT--AAGCAAAGAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAACTCAGATTTATCA--AAAATGGTAG-GAA-AAAA
* * * *
2594627 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
** *
2594662 ATCCTAATGAGGAGAATGCATTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
2594726 TTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTAGGAAAAAAGCCTTT
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
***
2594790 CTTGCAAAACGAAAGCATCAATATGGCGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * *** * ** * * *
2594819 ATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATTTGGAAAAGAAAGGGGATTAGTA-TGAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTCACAAAAGAATGAAGATCATTACT-AGA
* * ** *
2594882 ATTCATGTTTGTCATATTTAAGAGAC-AAGCTTTGATTCTATCAAAAATGGT-GGAAAGAAAAGT
63 ATTCATGTTTGTC-TTTTTAAG-CACGAA-CTCAGATT-TATCAAAAATGGTAGG-AA-AAAAGC
* * * * * *
2594945 TTTTCTTGCGACACAAAAGCATCAGTTTCATGT
122 CTTTCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * * ** *
2594978 ATCCTAAGGA-AGGGAT-TGCTTT-TTG-GCTCTAATTCTCGTAAAGGATGGAGATTGTTACGAG
1 ATCCTAATGAGA-GAATGTG-TTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACTAG
*** * ** * * * * *
2595039 AA-TCGATACCTGTCTTATTTAAGGGATAAACTTTA-ATTTAAATGAAAATAGGGCA-AAAAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAAC-TCAGATTT--ATCAAAA-ATGGTAGGAAAAAA
* * * *
2595101 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
*
2595136 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * *
2595200 TCCATGTTTGTTCCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTGGGAAAAAAGCCTTT
64 TTCATGTTTG-T-CTTTTTAAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
**
2595264 CTTGCAAAACGAAAGCATCAATATGGTGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * * ** * ** * * * *
2595293 ATTCTAATGAGAAGACA-ATGTTTATGGTGCCTAA-TCTGGAAAAGAAAGGGGATTAGTATTAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTC-ACAAAAGAATGAAGATCATTACTAGA
* ** * * *
2595356 ATTCATGTTTGTCTTATTTAGGAG-ACAAACTTTGATTCTATAAAAAACGGT-GGAAGGAAAAGT
63 ATTCATGTTTGTCTT-TTTA--AGCACGAACTCAGATT-TATCAAAAATGGTAGGAA--AAAAGC
* * * * * *
2595419 TTTTCTTGTGACATC-AAAGCGTCAATGTCATGT
122 CTTTCTTG-CAAAACGAAAGCATCAATATCATGT
* * * * * * ** *
2595452 AACTTAATGAAGGGAATGTGTTT-TGGCTTCATAA-TCTTGAAAAGAACTG-AGA-CAGTTACGA
1 ATCCTAATG-AGAGAATGTGTTTATAG-TGCCTAATTC-ACAAAAGAA-TGAAGATCA-TTACTA
* * * * * *
2595513 GAA-TCGAT-TCTTATCTTATTTAAGGTATGAACAT-TGATTTA-AAGGAAAATAGG--GCAAAG
61 GAATTC-ATGT-TTGTCTT-TTTAA-GCACGAAC-TCAGATTTATCA--AAAAT-GGTAG-GAA-
* * *
2595572 AAAAG--TTTCTTATGCAAAA-GAAAATCATCAATATTATTT
116 AAAAGCCTTTC-T-TGCAAAACG-AAAGCATCAATATCATGT
* * * ** *
2595611 ATCCTATTGAGGTGAATGTGTTTATAGTGCCTAA-TCACAAAATAAATGAAGATTGTTACTAAAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * *
2595675 TCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTA-CAAAAAAAATGGCAGGAAAAAAGCC
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATC---AAAAATGGTAGGAAAAAAGCC
* * *
2595739 TTTCTTGCGAAATGAAAGCATCAATATGATGT
123 TTTCTTGCAAAACGAAAGCATCAATATCATGT
* * ** * * * ** *
2595771 ATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATCCA-AAAAGGAAAGGGGATTAGTT--TGA
1 ATCCT-AATGAG-AGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCA-TTACT-A
* * ** *
2595832 GTATTCATGTTTGTCTTATTTAAG-AGAGAAACTTTGATTCTATC-AAAACGGT-GGAAAGAAAA
61 GAATTCATGTTTGTCTT-TTTAAGCA-CG-AACTCAGATT-TATCAAAAATGGTAGG-AA-AAAA
** * ** * * *
2595894 GTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGT
120 GCCTTTCTTGCAAAACGAAAGCATCAATATCATGT
** * * * * * ** *
2595929 ATCCTAAAAAAGGGAAT-T-TTT-TTG-GCTCTAATTCTCGTAAAGAATGGAGATTGTTA-TGGG
1 ATCCT-AATGAGAGAATGTGTTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACT-AG
** * * ** * * *
2595989 AA-TCGATGCCTGTCTTATTTAAGGGATGAACTTTGATTTA-AAGGAAAAT--AAGCAAAGAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAACTCAGATTTATCA--AAAATGGTAG-GAA-AAAA
* * * *
2596050 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
** *
2596085 ATCCTAATGAGGAGAATGCATTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
2596149 TTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTAGGAAAAAAGCCTTT
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
***
2596213 CTTGCAAAACGAAAGCATCAATATGGCGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * *** * ** * * *
2596242 ATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATTTGGAAAAGAAAGGGGATTAGTA-TGAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTCACAAAAGAATGAAGATCATTACT-AGA
* * ** *
2596305 ATTCATGTTTGTCATATTTAAGAGAC-AAGCTTTGATTCTATCAAAAATGGT-GGAAAGAAAAGT
63 ATTCATGTTTGTC-TTTTTAAG-CACGAA-CTCAGATT-TATCAAAAATGGTAGG-AA-AAAAGC
* * * * * *
2596368 TTTTCTTGCGACACAAAAGCATCAGTTTCATGT
122 CTTTCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * * ** *
2596401 ATCCTAAGGA-AGGGAT-TGCTTT-TTG-GCTCTAATTCTCGTAAAGGATGGAGATTGTTACGAG
1 ATCCTAATGAGA-GAATGTG-TTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACTAG
*** * ** * * * * *
2596462 AA-TCGATACCTGTCTTATTTAAGGGATAAACTTTA-ATTTAAATGAAAATAGGGCA-AAAAAAA
62 AATTC-ATGTTTGTCTT-TTTAA-GCACGAAC-TCAGATTT--ATCAAAA-ATGGTAGGAAAAAA
* * * *
2596524 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
*
2596559 ATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA-TCACAAAATGAAGGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * *
2596623 TCCATGTTTGTTCCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTGGGAAAAAAACCTTT
64 TTCATGTTTG-T-CTTTTTAAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
**
2596687 CTTGCAAAACGAAAGCATCAATATGGTGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * * ** * ** * * * *
2596716 ATTCTAATGAGAAGACA-ATGTTTATGGTGCCTAA-TCTGGAAAAGAAAGGGGATTAGTATTAGT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTC-ACAAAAGAATGAAGATCATTACTAGA
* ** * * *
2596779 ATTCATGTTTGTCTTATTTAGGAG-ACAAACTTTGATTCTATAAAAAACGGT-GGAAGAAAAAGT
63 ATTCATGTTTGTCTT-TTTA--AGCACGAACTCAGATT-TATCAAAAATGGTAGG-A-AAAAAGC
* * * * * *
2596842 TTTTCTTGTGACATC-AAAGCGTCAATGTCATGT
122 CTTTCTTG-CAAAACGAAAGCATCAATATCATGT
* * * * * * ** *
2596875 AACTTAATGAAGGGAATGTGTTT-TGGCTTCATAA-TCTTGAAAAGAACTG-AGA-CAGTTACGA
1 ATCCTAATG-AGAGAATGTGTTTATAG-TGCCTAATTC-ACAAAAGAA-TGAAGATCA-TTACTA
* * * * * *
2596936 GAA-TCGAT-TCTTATCTTATTTAAGGTATGAACAT-TGATTTA-AAGGAAAATAGG--GCAAAG
61 GAATTC-ATGT-TTGTCTT-TTTAA-GCACGAAC-TCAGATTTATCA--AAAAT-GGTAG-GAA-
* * *
2596995 AAAAG--TTTCTTATGCAAAA-GAAAATCATCAATATTATTT
116 AAAAGCCTTTC-T-TGCAAAACG-AAAGCATCAATATCATGT
* * * ** *
2597034 ATCCTATTGAGGTGAATGTGTTTATAGTGCCTAA-TCACAAAATAAATGAAGATTGTTACTAAAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * *
2597098 TCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTA-CAAAAAAAATGGCAGGAAAAAAGCC
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATC---AAAAATGGTAGGAAAAAAGCC
* * *
2597162 TTTCTTGCGAAATGAAAGCATCAATATGATGT
123 TTTCTTGCAAAACGAAAGCATCAATATCATGT
* * ** * * * ** *
2597194 ATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATCCAAAAAAGAATGGGGATTAGTT--TGAG
1 ATCCT-AATGAG-AGAATGTGTTTATAGTGCCTAATTCACAAAAGAATGAAGATCA-TTACT-AG
* * * ** *
2597256 TATTTATGTTTGTCTTATTTAAG-AGAGAAACTTTGATTCTATC-AAAACGGT-GGAAAGAAAAG
62 AATTCATGTTTGTCTT-TTTAAGCA-CG-AACTCAGATT-TATCAAAAATGGTAGG-AA-AAAAG
** * ** * * *
2597318 TTTTTCTTGCGAGCCCAAAGCATCAGTTTCATGT
121 CCTTTCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * * ** * *
2597352 ATCCTAAGGAAGGGAATGT-TTT-TTG-GCTCTAACTCTCGTAAAGAATGGAGATTGTTGCGAGA
1 ATCCTAATG-AGAGAATGTGTTTATAGTGC-CTAATTCAC-AAAAGAATGAAGATCATTACTAGA
** * * ** *
2597414 A-TCGATGCCTGTCTTATTTAAGGGATGAACTTTGATTTA-AAGGAAAATAAGGTA--AAGAAAA
63 ATTC-ATGTTTGTCTT-TTTAA-GCACGAACTCAGATTTATCA--AAAAT--GGTAGGAA-AAAA
* * * *
2597475 G-ATTTCCATGCAAAA-GAAAATCATCAATATCATTT
120 GCCTTT-CTTGCAAAACG-AAAGCATCAATATCATGT
** * *
2597510 ATCCTAATGAGGAGAATGCATTTATAGTGCCTAA-TCACAAAATGAAGGAAGGTCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
2597574 TTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTAGGAAAAAAGCCTTT
64 TTCATGTTTGTCT-TTTT-AAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
***
2597638 CTTGCAAAACGAAAGCATCAATATGGCGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* * *** ** * *
2597667 ATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATTCGGGAAAGACA-GGGGATTAGTA-TGAG
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAATTCACAAAAGA-ATGAAGATCATTACT-AG
* * * * ** *
2597729 TATTCATGTTTGTCATATTTAAGAGACAAACTTTGATTCTATCAAAAACGGT-GGAAGGAAAAGT
62 AATTCATGTTTGTC-TTTTTAAG-CACGAACTCAGATT-TATCAAAAATGGTAGGAA--AAAAG-
* ** ** * *
2597793 GC-TTCTTGTGACCCTAAAGCATCAATTTCATGT
121 CCTTTCTTGCAAAACGAAAGCATCAATATCATGT
* * * * * * * * * * * *
2597826 ATCCTAATGAAGGGAATGGGTTTGT-CT-CCCAATCTTA-TAAAGAAAGGAGATAATTACGAGCA
1 ATCCTAATG-AGAGAATGTGTTTATAGTGCCTAAT-TCACAAAAGAATGAAGATCATTACTAGAA
* * * * * * ** * * *
2597888 CTGATGCTTGTCTTATTTAAGGGATGAATTTTGATTT-TAAGGAAAATAGG--GCAAAGAAAAGA
64 TTCATGTTTGTCTT-TTTAA-GCACGAACTCAGATTTATCA--AAAAT-GGTAG-GAA-AAAAGC
* * * * * * * *
2597950 TTTTCATGCAAGA-GAAAATCTTCAATTTCTTTT
122 CTTTCTTGCAAAACG-AAAGCATCAATATCATGT
* * * *
2597983 ATCCTAATAAGGGGAATGCGTTTATAGTGCCTAA-TCACAAAATGAAAGAAGATCATTACTAGAA
1 ATCCTAATGA-GAGAATGTGTTTATAGTGCCTAATTCACAAAA-GAATGAAGATCATTACTAGAA
* * * * * * * *
2598047 TCCAAGTTTGTCTCGTTTGAGGCACGAACTTAAACTTTATAAAAAATGGTGGGAAAAAAGCCTTT
64 TTCATGTTTGTCT--TTTTAAGCACGAACTCAGA-TTTATCAAAAATGGTAGGAAAAAAGCCTTT
* * *
2598112 ATTGCAAAACGAAAGCTTCAATATGATGT
126 CTTGCAAAACGAAAGCATCAATATCATGT
* *
2598141 ATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAAT
1 ATCCTAATGAG-AGA-ATGTGTTTATAGTGCCTAAT
2598176 CTGGAAAAGA
Statistics
Matches: 9267, Mismatches: 2364, Indels: 2409
0.66 0.17 0.17
Matches are distributed among these distances:
147 1 0.00
148 20 0.00
149 57 0.01
150 21 0.00
151 6 0.00
154 12 0.00
155 146 0.02
156 739 0.08
157 2172 0.23
158 2168 0.23
159 2697 0.29
160 1025 0.11
161 161 0.02
162 35 0.00
163 7 0.00
ACGTcount: A:0.37, C:0.13, G:0.19, T:0.31
Consensus pattern (154 bp):
ATCCTAATGAGAGAATGTGTTTATAGTGCCTAATTCACAAAAGAATGAAGATCATTACTAGAATT
CATGTTTGTCTTTTTAAGCACGAACTCAGATTTATCAAAAATGGTAGGAAAAAAGCCTTTCTTGC
AAAACGAAAGCATCAATATCATGT
Found at i:2588369 original size:949 final size:949
Alignment explanation
Indices: 2585057--2604822 Score: 25132
Period size: 949 Copynumber: 20.8 Consensus size: 949
2585047 TGTCTCCCGA
* * ** * *
2585057 TCTCATAAAGAAAGGAGATAATTACGAGCA-CTGATGCTTGTCTTATTTAAGGGATGAACTTTGA
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATC-GATGCCTGTCTTATTTAAGGGATGAACTTTGA
* * * *
2585121 TTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATAAATTTC-TTTAATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTT-ATC
* * * *
2585185 CTAATGAGGGGAATGTGTTTGTAGTGCCTAATCACAAAATGAAAGAAGATTATTACTAGAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * * * *
2585250 AGTTTGTC-CTATTTGAGGCACGAACTTAAACTTTATAAAAAATGGTGGGAAAAAAGCCTTTGTT
194 TGTTTGTCTCT-TTTGAAGCACGAACTCAGACTTTAT-AAAAATGGTGGGAAAAAAGCCTTTCTT
*
2585314 GCAAAACGAAAGCATCAATATGATGTATCCTAATGAGATGACAATGTTTATGGTGCCTAATCTGG
257 GCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGG
* *
2585379 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGCTTCTAT
322 AAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAT
* * * * *
2585444 CACAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATGTCTTGCATCCTAATGA
387 CAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAATGA
*
2585509 AGGAAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTTGT
452 AGGGAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTTGT
* * * * **
2585574 CTTATTTAAGGTATGAACATCGTTTTAAAGGAAAAT-TTGCAAAGAAAAGA-TTCCAATGCAAAA
517 CTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATGCAAAA
* * * *
2585637 GAAAATCATCAATATCATTTATCCTAATAAGGACAATATGTTTATAGTGCCTATTCACAAAATGA
581 GAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * * ** * *
2585702 ATGAAGATCGTTGCTAGAATCCAAGTTCATCTCATTTGAAGCACGAACTTAGACTTTACAAAAAA
646 ATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT--ATAAAA
* * * * *
2585767 ATGGTGGGAAAAAAGCTTTTCTTGCGAAACGAAAGCGTTAATATGATGTATCCTAAAGAGAAGAC
709 ATGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGAC
* * * * *
2585832 TATGTTTATGGTGCCTTATCTTGAAAGGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
774 AATGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
*
2585897 TAAGAGACAAACTTTAATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGC
839 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGC
* * *
2585962 ATCAATTTCATATATCCTAAGGAAGGGAATGTTTTTTGGCTCTAAT
904 ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCTAAT
* * *
2586008 TCTCGTAAAGAATGGAGATTGTTACAAGAATCGATGCCTGTCTTATTTAAGGGCTGAACTTTCAT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
*
2586073 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATTAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
* **
2586138 AATGTGGAGAATGCATTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* *
2586203 TTTGTCTCTTTTGAAGCACGAATTTCA-ACTTTATAAAAATGGTGGGAAAATAGCCTTTCTTGCA
196 TTTGTCTCTTTTGAAGCACGAA-CTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* * * * ***
2586267 AAATGAAAGCATCGATATGATGTATCCTAATGAGAAGACAATGTTTCTGGTGCATAATCCAAAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * * *
2586332 AGAATGGGGATTAGTATGAGTTTTCATGTTTATCTTATTTATGAGACAAACTTTGATTCTATCAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * * *
2586397 AAATGTTCGAAGGAAAAGTTTTTCTTGTAACGTCAAAGCATC-ATTGTCATGTATCCTAAT-AAG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATT-TCATGTATCCTAATGAA-
* * **
2586460 GGGAATGTGTTTTGGCTTCATAATCCTGAAAAGAACTGAGACAGTTATAAGAATCGATTCTTGTC
453 GGGAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTTGTC
* * * **
2586525 TTATTTAAGGTATAAACATTGATTTATTGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
518 TTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGA
* * * * * *
2586590 AAATAATCAATATCATTTATCCAAATGAGGAGAATGCGTTTGTAGTGCCTAATCAAAAAATGAAA
583 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAT
* * *
2586655 GAAGATCATTACTAGAATCCA---------CGTTTGAGGCAGGAACTTAGACTTTA-AAAAATTT
648 GAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAA--T
*
2586710 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCCATATGATGTATCCTAATGAGAAGACAA
711 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAA
* ** * * *
2586775 TATTTATGGTGCCTAATCCAGAAAAG-AATGGGATTAGTATGAGTATTCGTGTTTATCTTATTTA
776 TGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * * *
2586839 AGAGACAAACTTTGATTCTGTTAAAAACGGTGGAAGGAAAAGTTTTTCTTGCAAC-CTCAAAGCA
841 AGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACAC-CAAAGCA
* * **
2586903 TCAATTTCATATATCCTAATGAAGGGAATGTGTTTTGGGTCCGAT
905 TCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCTAAT
* * * * * * * *
2586948 TCTCATAAACAATGGAGACTATTACAAGAATCGATACTTGTCCTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
*
2587013 TTAAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
* * * * * * *
2587078 AATGAGGAGAATATGTTTTTACTTCCTAA--ACATAATGAAAGAATATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* * * * * *
2587141 CTTGTCTCTTTTGAAGCACAAACTTAGAGTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTCCA
196 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTA-TAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* * * *
2587206 GAACGAAAGCATCAATGTGATGTATCCTAATGAGAAGACAATGTTTATGGTGCATAATCTAGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
*
2587271 AGAATA-GGGATTAGTATGAGTATTCATGTTTGTCTTATTTATGAGACAAACTTTGATTCTATCA
325 AGAA-AGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCA
* * *
2587335 AAAACGTTGGAAGGAAAAGTTTTTCTTGTAACGTCAAAGCATC-ATTGTCATGTATCCTAAT-AA
389 AAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATT-TCATGTATCCTAATGAA
* * *
2587398 GGGGAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGACAGTTACAAGAATCAATTCTTGT
453 -GGGAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTTGT
* * * * *
2587463 CTTATTTAAGGTATAAACATTGATTTAATGGAACATAGGGCAAAGAAAAG-TTTCCCATGCAAAA
517 CTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTT-CCATGCAAAA
* **
2587527 GAAAATCATCAATATTATTTATCCTAATGAGCTGAATGTGTTTATAGTGCCTAATCACAAAATGA
581 GAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* *
2587592 ATGAAGATCATTACTAGAATTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAAT
646 ATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAAT
* **
2587657 GGTAGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAA
711 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAA
* *
2587722 TGTTTATGGTGCCTAATTTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTA
776 TGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * *
2587787 AGAGACAAGCTTTGATTCTATCAAAAATGGTGGAAAGAAAAGTTTTTCTTGCGACACAAAAGCAT
841 AGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGCAT
* * *
2587852 CAGTTTCATGTATCCTAAGGAAGGGATTGCT-TTTTGGCTCTAAT
906 CAATTTCATGTATCCTAATGAAGGGAATG-TGTTTTGGCTCTAAT
* * * *
2587896 TCTCGTAAAGGATGGAGATTGTTACGAGAATCGATACCTGTCTTATTTAAGGGATAAACTTTAAT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
* *
2587961 TTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
*
2588026 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
2588091 TTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
196 TTTGTCT-CTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2588155 AAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2588220 AGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATAAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * *
2588285 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGTCAATGTCATGTAACTTAATGAAGG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAATGAAGG
* *
2588350 GAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGACAGTTACGAGAATCGATTCTTATCTT
455 GAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTTGTCTT
* * *
2588415 ATTTAAGGTATGAACATTGATTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAA
520 ATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAA
* * * *
2588479 AATCATCAATATTATTTATCCTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATG
584 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
** * * *
2588544 AAGATTGTTACTAAAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAAT
649 AAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT---ATAAAAAT
** * * * *
2588609 GGCAGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACT
711 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACA
* ** *
2588673 ACGTTTATGGTGCCTAATC-CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATT
775 ATGTTTATGGTGCCTAATCTGGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* *
2588737 TAAGAGAGAAACTTTGATTCTATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGC
839 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGC
* ** *
2588801 ATCAGTTTCATGTATCCTAAAAAAGGGAAT-TTTTTTGGCTCTAAT
904 ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCTAAT
* *
2588846 TCTCGTAAAGAATGGAGATTGTTATGGGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
*
2588911 TTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
** * *
2588975 AATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATTCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
*
2589040 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGCAA
196 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
** *
2589105 AACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTTGGAAAA
261 AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAAA
* *
2589170 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAGCTTTGATTCTATCAAA
326 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
* * * * *
2589235 AATGGTGGAAAGAAAAGTTTTTCTTGCGACA-CAAAAGCATCAGTTTCATGTATCCTAAGGAAGG
391 AACGGTGGAAGGAAAAGTTTTTCTTGTGACATC-AAAGCATCAATTTCATGTATCCTAATGAAGG
* * * * * * *
2589299 GATTGCT-TTTTGGC-TC-TAATTCTCGTAAAGGA-TGGAGATTGTTACGAGAATCGATACCTGT
455 GAATG-TGTTTTGGCTTCATAA-TCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATTCTTGT
* * * *
2589360 CTTATTTAAGGGATAAACTTTAATTTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAG
517 CTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
2589425 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
582 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* *
2589490 GGAAGATCATTACTAGAATCCATGTTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAAT
647 TGAAGATCATTACTAGAATCCATGTTTGTCT-CTTTTGAAGCACGAACTTAGACTTTATAAAAAT
* *
2589554 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAA
711 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAA
*
2589619 TGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTA
776 TGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * * * * *
2589684 GGAGACAAACTTTGATTCTATAAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGT
841 AGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGCAT
* * *
2589749 CAATGTCATGTAACTTAATGAAGGGAATGTGTTTTGGCTTCATAA-
906 CAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGC-TC-TAAT
* * ** * * * * *
2589794 TCTTGAAAAGAACT-GAGACAGTTACGAGAATCGATTCTTATCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGA
* *
2589858 TTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAAAATCATCAATATTATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATC
* * * ** *
2589922 CTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGATTGTTACTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * * **
2589987 TGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAATGGCAGGAAAAAAGCCTTTCT
194 TGTTTGTCTCTTTTGAAGCACGAACTCAGACTTT---ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * *
2590052 TGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATC-
256 TGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCT
** * *
2590115 CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATTTAAGAGAGAAACTTTGATTC
320 GGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTC
* * ** *
2590180 TATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGTATCCTAA
384 TATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAA
** * * * * * * *
2590244 AAAAGGGAAT-TTTTTTGGC-TC-TAATTCTCGTAAAGAA-TGGAGATTGTTATGGGAATCGATG
449 TGAAGGGAATGTGTTTTGGCTTCATAA-TCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATT
* *
2590305 CCTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGC
512 CTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGC
**
2590369 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGCATTTATAGTGCCTAATCACAAA
577 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAA
* * *
2590434 ATGAAGGAAGATCATTACTAGAATTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAA
642 ATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAA
* **
2590499 AAATGGTAGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGGCGTATCCTAATGAGAAG
707 AAATGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAG
* *
2590564 ACAATGTTTATGGTGCCTAATTTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCATA
772 ACAATGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * *
2590629 TTTAAGAGACAAGCTTTGATTCTATCAAAAATGGTGGAAAGAAAAGTTTTTCTTGCGACACAAAA
837 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAA
* * *
2590694 GCATCAGTTTCATGTATCCTAAGGAAGGGATTGCT-TTTTGGCTCTAAT
902 GCATCAATTTCATGTATCCTAATGAAGGGAATG-TGTTTTGGCTCTAAT
* * * *
2590742 TCTCGTAAAGGATGGAGATTGTTACGAGAATCGATACCTGTCTTATTTAAGGGATAAACTTTAAT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
* *
2590807 TTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
*
2590872 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
2590937 TTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
196 TTTGTCT-CTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2591001 AAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2591066 AGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATAAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * *
2591131 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGTCAATGTCATGTAACTTAATGAAGG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAATGAAGG
* *
2591196 GAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGACAGTTACGAGAATCGATTCTTATCTT
455 GAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTTGTCTT
* * *
2591261 ATTTAAGGTATGAACATTGATTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAA
520 ATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAA
* * * *
2591325 AATCATCAATATTATTTATCCTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATG
584 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
** * * *
2591390 AAGATTGTTACTAAAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAAT
649 AAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT---ATAAAAAT
** * * * *
2591455 GGCAGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACT
711 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACA
* ** *
2591519 ACGTTTATGGTGCCTAATC-CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATT
775 ATGTTTATGGTGCCTAATCTGGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* *
2591583 TAAGAGAGAAACTTTGATTCTATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGC
839 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGC
* ** *
2591647 ATCAGTTTCATGTATCCTAAAAAAGGGAAT-TTTTTTGGCTCTAAT
904 ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCTAAT
* *
2591692 TCTCGTAAAGAATGGAGATTGTTATGGGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
*
2591757 TTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
** * *
2591821 AATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATTCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
*
2591886 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGCAA
196 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
** *
2591951 AACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTTGGAAAA
261 AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAAA
* *
2592016 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAGCTTTGATTCTATCAAA
326 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
* * * * *
2592081 AATGGTGGAAAGAAAAGTTTTTCTTGCGACA-CAAAAGCATCAGTTTCATGTATCCTAAGGAAGG
391 AACGGTGGAAGGAAAAGTTTTTCTTGTGACATC-AAAGCATCAATTTCATGTATCCTAATGAAGG
* * * * * * *
2592145 GATTGCT-TTTTGGC-TC-TAATTCTCGTAAAGGA-TGGAGATTGTTACGAGAATCGATACCTGT
455 GAATG-TGTTTTGGCTTCATAA-TCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATTCTTGT
* * * *
2592206 CTTATTTAAGGGATAAACTTTAATTTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAG
517 CTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
2592271 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
582 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* *
2592336 GGAAGATCATTACTAGAATCCATGTTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAAT
647 TGAAGATCATTACTAGAATCCATGTTTGTCT-CTTTTGAAGCACGAACTTAGACTTTATAAAAAT
* *
2592400 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAA
711 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAA
*
2592465 TGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTA
776 TGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * * * * *
2592530 GGAGACAAACTTTGATTCTATAAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGT
841 AGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGCAT
* * *
2592595 CAATGTCATGTAACTTAATGAAGGGAATGTGTTTTGGCTTCATAA-
906 CAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGC-TC-TAAT
* * ** * * * * *
2592640 TCTTGAAAAGAACT-GAGACAGTTACGAGAATCGATTCTTATCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGA
* *
2592704 TTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAAAATCATCAATATTATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATC
* * * ** *
2592768 CTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGATTGTTACTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * * **
2592833 TGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAATGGCAGGAAAAAAGCCTTTCT
194 TGTTTGTCTCTTTTGAAGCACGAACTCAGACTTT---ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * *
2592898 TGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATC-
256 TGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCT
** * *
2592961 CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATTTAAGAGAGAAACTTTGATTC
320 GGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTC
* * ** *
2593026 TATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGTATCCTAA
384 TATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAA
** * * * * * * *
2593090 AAAAGGGAAT-TTTTTTGGC-TC-TAATTCTCGTAAAGAA-TGGAGATTGTTATGGGAATCGATG
449 TGAAGGGAATGTGTTTTGGCTTCATAA-TCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATT
* *
2593151 CCTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGC
512 CTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGC
**
2593215 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGCATTTATAGTGCCTAATCACAAA
577 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAA
* * *
2593280 ATGAAGGAAGATCATTACTAGAATTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAA
642 ATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAA
* **
2593345 AAATGGTAGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGGCGTATCCTAATGAGAAG
707 AAATGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAG
* *
2593410 ACAATGTTTATGGTGCCTAATTTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCATA
772 ACAATGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * *
2593475 TTTAAGAGACAAGCTTTGATTCTATCAAAAATGGTGGAAAGAAAAGTTTTTCTTGCGACACAAAA
837 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAA
* * *
2593540 GCATCAGTTTCATGTATCCTAAGGAAGGGATTGCT-TTTTGGCTCTAAT
902 GCATCAATTTCATGTATCCTAATGAAGGGAATG-TGTTTTGGCTCTAAT
* * * *
2593588 TCTCGTAAAGGATGGAGATTGTTACGAGAATCGATACCTGTCTTATTTAAGGGATAAACTTTAAT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
* *
2593653 TTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
*
2593718 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
2593783 TTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
196 TTTGTCT-CTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2593847 AAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2593912 AGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATAAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * *
2593977 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGTCAATGTCATGTAACTTAATGAAGG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAATGAAGG
* *
2594042 GAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGACAGTTACGAGAATCGATTCTTATCTT
455 GAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTTGTCTT
* * *
2594107 ATTTAAGGTATGAACATTGATTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAA
520 ATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAA
* * * *
2594171 AATCATCAATATTATTTATCCTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATG
584 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
** * * *
2594236 AAGATTGTTACTAAAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAAT
649 AAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT---ATAAAAAT
** * * * *
2594301 GGCAGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACT
711 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACA
* ** *
2594365 ACGTTTATGGTGCCTAATC-CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATT
775 ATGTTTATGGTGCCTAATCTGGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* *
2594429 TAAGAGAGAAACTTTGATTCTATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGC
839 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGC
* ** *
2594493 ATCAGTTTCATGTATCCTAAAAAAGGGAAT-TTTTTTGGCTCTAAT
904 ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCTAAT
* *
2594538 TCTCGTAAAGAATGGAGATTGTTATGGGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
*
2594603 TTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
** * *
2594667 AATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATTCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
*
2594732 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGCAA
196 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
** *
2594797 AACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTTGGAAAA
261 AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAAA
* *
2594862 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAGCTTTGATTCTATCAAA
326 GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
* * * * *
2594927 AATGGTGGAAAGAAAAGTTTTTCTTGCGACA-CAAAAGCATCAGTTTCATGTATCCTAAGGAAGG
391 AACGGTGGAAGGAAAAGTTTTTCTTGTGACATC-AAAGCATCAATTTCATGTATCCTAATGAAGG
* * * * * * *
2594991 GATTGCT-TTTTGGC-TC-TAATTCTCGTAAAGGA-TGGAGATTGTTACGAGAATCGATACCTGT
455 GAATG-TGTTTTGGCTTCATAA-TCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATTCTTGT
* * * *
2595052 CTTATTTAAGGGATAAACTTTAATTTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAG
517 CTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
2595117 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
582 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* *
2595182 GGAAGATCATTACTAGAATCCATGTTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAAT
647 TGAAGATCATTACTAGAATCCATGTTTGTCT-CTTTTGAAGCACGAACTTAGACTTTATAAAAAT
* *
2595246 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAA
711 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAA
*
2595311 TGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTA
776 TGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * * * * *
2595376 GGAGACAAACTTTGATTCTATAAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCGT
841 AGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGCAT
* * *
2595441 CAATGTCATGTAACTTAATGAAGGGAATGTGTTTTGGCTTCATAA-
906 CAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGC-TC-TAAT
* * ** * * * * *
2595486 TCTTGAAAAGAACT-GAGACAGTTACGAGAATCGATTCTTATCTTATTTAAGGTATGAACATTGA
1 TCTCGTAAAGAA-TGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGA
* *
2595550 TTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAAAATCATCAATATTATTTATC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATC
* * * ** *
2595614 CTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATGAAGATTGTTACTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * * **
2595679 TGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAATGGCAGGAAAAAAGCCTTTCT
194 TGTTTGTCTCTTTTGAAGCACGAACTCAGACTTT---ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * *
2595744 TGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACTACGTTTATGGTGCCTAATC-
256 TGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCT
** * *
2595807 CAAAAAGGAAAGGGGATTAGTTTGAGTATTCATGTTTGTCTTATTTAAGAGAGAAACTTTGATTC
320 GGAAAA-GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTC
* * ** *
2595872 TATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGACCCCAAAGCATCAGTTTCATGTATCCTAA
384 TATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAA
** * * * * * * *
2595936 AAAAGGGAAT-TTTTTTGGC-TC-TAATTCTCGTAAAGAA-TGGAGATTGTTATGGGAATCGATG
449 TGAAGGGAATGTGTTTTGGCTTCATAA-TCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATT
* *
2595997 CCTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA-AGCAAAGAAAAGATTTCCATGC
512 CTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGC
**
2596061 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGCATTTATAGTGCCTAATCACAAA
577 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAA
* * *
2596126 ATGAAGGAAGATCATTACTAGAATTCATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAA
642 ATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAA
* **
2596191 AAATGGTAGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGGCGTATCCTAATGAGAAG
707 AAATGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAG
* *
2596256 ACAATGTTTATGGTGCCTAATTTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCATA
772 ACAATGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * *
2596321 TTTAAGAGACAAGCTTTGATTCTATCAAAAATGGTGGAAAGAAAAGTTTTTCTTGCGACACAAAA
837 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAA
* * *
2596386 GCATCAGTTTCATGTATCCTAAGGAAGGGATTGCT-TTTTGGCTCTAAT
902 GCATCAATTTCATGTATCCTAATGAAGGGAATG-TGTTTTGGCTCTAAT
* * * *
2596434 TCTCGTAAAGGATGGAGATTGTTACGAGAATCGATACCTGTCTTATTTAAGGGATAAACTTTAAT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
* *
2596499 TTAAATGAAAATAGGGCAAAAAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
*
2596564 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAAGGAAGATCATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
*
2596629 TTTGT-TCCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAACCTTTCTTGCA
196 TTTGTCT-CTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* *
2596693 AAACGAAAGCATCAATATGGTGTATTCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2596758 AGAAAGGGGATTAGTATTAGTATTCATGTTTGTCTTATTTAGGAGACAAACTTTGATTCTATAAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
* * * * *
2596823 AAACGGTGGAAGAAAAAGTTTTTCTTGTGACATCAAAGCGTCAATGTCATGTAACTTAATGAAGG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAATGAAGG
* *
2596888 GAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGACAGTTACGAGAATCGATTCTTATCTT
455 GAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTTGTCTT
* * *
2596953 ATTTAAGGTATGAACATTGATTTAAAGGAAAATAGGGCAAAGAAAAG-TTTCTTATGCAAAAGAA
520 ATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTC-CATGCAAAAGAA
* * * *
2597017 AATCATCAATATTATTTATCCTATTGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATAAATG
584 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
** * * *
2597082 AAGATTGTTACTAAAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAAAAT
649 AAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT---ATAAAAAT
** * * * *
2597147 GGCAGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCATGAA-GAGAAGACT
711 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACA
* *** * * *
2597211 ACGTTTATGGTGCCTAATCCAAAAAAGAATGGGGATTAGTTTGAGTATTTATGTTTGTCTTATTT
775 ATGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTT
*
2597276 AAGAGAGAAACTTTGATTCTATC-AAAACGGTGGAAAGAAAAGTTTTTCTTGCGAGC-CCAAAGC
840 AAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGA-CACCAAAGC
* * * *
2597339 ATCAGTTTCATGTATCCTAAGGAAGGGAATGTTTTTTGGCTCTAAC
904 ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCTAAT
*
2597385 TCTCGTAAAGAATGGAGATTGTTGCGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
* *
2597450 TTAAAGGAAAATAAGGTAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
** * * *
2597515 AATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATGAAGGAAGGTCATTACTAGAATTCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
*
2597580 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTAGGAAAAAAGCCTTTCTTGCAA
196 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
** *
2597645 AACGAAAGCATCAATATGGCGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-TCGGGAA
261 AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCT-GGAAA
* *
2597709 AGACAGGGGATTAGTATGAGTATTCATGTTTGTCATATTTAAGAGACAAACTTTGATTCTATCAA
325 AGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAA
** *
2597774 AAACGGTGGAAGGAAAAGTGCTTCTTGTGAC-CCTAAAGCATCAATTTCATGTATCCTAATGAAG
390 AAACGGTGGAAGGAAAAGTTTTTCTTGTGACATC-AAAGCATCAATTTCATGTATCCTAATGAAG
* * ** ** * * *
2597838 GGAATG-GGTTTGTC-TCCCAATCTT-ATAAAGAAAGGAGATAATTACGAGCA-CTGATGCTTGT
454 GGAATGTGTTTTGGCTTCATAATCTTGA-AAAGAACTGAGATAGTTACGAGAATC-GATTCTTGT
* * * *
2597899 CTTATTTAAGGGATGAATTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCAAGAG
517 CTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAG
* * * * * *
2597964 AAAATCTTCAATTTCTTTTATCCTAATAAGGGGAATGCGTTTATAGTGCCTAATCACAAAATGAA
582 AAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAA
* * * * *
2598029 AGAAGATCATTACTAGAATCCAAGTTTGTCTCGTTTGAGGCACGAACTTAAACTTTATAAAAAAT
647 TGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTAT-AAAAAT
* *
2598094 GGTGGGAAAAAAGCCTTTATTGCAAAACGAAAGCTTCAATATGATGTATCCTAATGAGAAGACAA
711 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAA
* *
2598159 TGTTTATGGTGCCTAATCTGGAAAAGAACGGGGATTAGTATGAGTATTGATGTTTGTCTTATTTA
776 TGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* *
2598224 AGAGATAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGAC-CTCAAAGCA
841 AGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACAC-CAAAGCA
* * * * * * *
2598288 TCAATGTCTTGCATCCTGATGAAGGAAATGTGTTTTGGCTTCAAAA
905 TCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGC-TCTAAT
* * * * * * * * * *
2598334 TCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATTCTTATCTTATTCAAGGTATGAAC-ATCA
1 TCTCGTAAAGAA-TGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGA
2598397 TTTTAAAGGAAAATA-GGCAAAGAAAAGA-TTCCAATGCAAAAGAAAATCATCAATATCATTTAT
65 -TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATGCAAAAGAAAATCATCAATATCATTTAT
* * * * * **
2598460 CCTAATAAGGAGAATATGTTTATAGTTCCTATTCACAAAATGAATGAAGATCGTTGTTAGAATCC
128 CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCC
* ** * * * *
2598525 AAGTTCATCTCATTTGAAGCATGAACTTAGACTTTGCA-AAAAATGGTGGGAAAAAAGCTTTTCT
193 ATGTTTGTCTCTTTTGAAGCACGAACTCAGACTTT--ATAAAAATGGTGGGAAAAAAGCCTTTCT
* * * * * * *
2598589 TGCGAAACGAAAGCGTTAATATGATGTATCCTAAAGAGAAGACTATGTTTATAGTGCCTTATCCT
256 TGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CT
* * * *
2598654 -GAAAGGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTTTTTAAGAGACAAACTTTAATTCT
320 GGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCT
* * * * *
2598718 ATCAAAAACGGTGGAAGGAAAATTTTTTCTTGCGACCTCAAAGCAACAATTTCATGTCTCCTAAT
385 ATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAAT
* * * *
2598783 GAAGGGAATGAGTTTTGGCTTCACAAGCTTGAAAAGAACTGAGATAGTTACGAGAATCGATGCTT
450 GAAGGGAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTT
* * *
2598848 -TCTTTTTTTAAGGGATGAACTTTGATTTAAAAGAAAATAGGGCAAAGAAAAGATTTTCATGCAA
515 GTC-TTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAA
* *
2598912 AAGAAAATCATCAATATCATTTATCCTAATAAGGAGAATGCGTTTATAGTGCCTAATCACAAAAT
579 AAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * * * * *
2598977 GAAAGAAGATCATTACTAGAATCCACGTTTGTCTCATTTCAGGCATGACCTTAGACTTTA-AAAA
644 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAA
* * *
2599041 ATTTGGTGGGAAAAAAGCCTTTCTTGCAAAATGAAAGCATCAAAATGATGTATCCTCATGAGAAG
709 A--TGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAG
* * * * * *
2599106 ACAATGTTTATAGTGCCTAATTTGGAAGAGAATGGCGATTAGTATGAGTTTTCATGTTTGTCTTA
772 ACAATGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * * * * * *
2599171 TTTAAGAGACAAACATTGATTCTGTCAAAAACGGTGGAAGGAAAAGCTTTTCTTGTGATATCAAT
837 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAA
* *
2599236 GCATCAATGTT--TGTATCTTAATGAAGGGAATGTGTTTTGGCT-TCACAA
902 GCATCAAT-TTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCT-A-AT
* * * * *
2599284 TCT-TTAAA-AACT-GAGATAGTTACGAGAATCGAT-TCTGGTCTTATTTAAGGTATGAACATTG
1 TCTCGTAAAGAA-TGGAGATTGTTACGAGAATCGATGCCT-GTCTTATTTAAGGGATGAACTTTG
* *
2599345 ATTTAAAGGAAAATAGGGCAAAAAAAAGATTCCCATGCAAAAGAAAATCATCAATATCATTTATC
64 ATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATC
* * *
2599410 CTAATGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTATTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * * * *
2599475 CGTTTGTCTCATTTGAGGCATGAACTTAGACTTTA-AAAAATTTGGTGGGAAAAAAGCCTTTCTT
194 TGTTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAA--TGGTGGGAAAAAAGCCTTTCTT
* * * *
2599539 GCAAAACGAAAGCATCAAAATGATGTATCCTCATGAGAAGACAATGTTTATAGTGCCTAATTTGG
257 GCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGG
* * * * * *
2599604 AAGAGAATGGCGATTAGTATGAGTTTTCATGTTTGTCTTATTTAAGAGACAAACATTGATTCTGT
322 AAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAT
* * ** *
2599669 CAAAAACGGTGGAAGGAAAAGCTTTTCTTGTGACATCAATGTGTCAATGTT--TGTATCTTAATG
387 CAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAAT-TTCATGTATCCTAATG
* *
2599732 AAGGGAATGTGTTTTGGCTTCACAATCTTGAAAA-AACTGAGATAGTTACGAGAATCGATTCTGG
451 AAGGGAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTTG
* * * *
2599796 TCTTATTTAAGGTATGAACATTGATTTAAAGGAAAATAGGGCAAAAAAAAGATTCCCATGCAAAA
516 TCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAA
* *
2599861 GAAAATCATCAATATCATTTATCCTAATGAGGTGAATGTGTTTATTGTGCCTAATCACAAAATGA
581 GAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGA
* * * * * *
2599926 ATGAAGATCATTATTAAAATCCACGTTTGTCTCATTTGAGGCATGAACTTAGACTTTA-AAAAAT
646 ATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAA-
* *
2599990 TTGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAAAATGATGTATCCTCATGAGAAGAC
710 -TGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGAC
* * * * * * *
2600055 AATGTTTATAGTGCCTAATTTGGAAGAGAATGGCGATTAGTATGAGTTTTCATGTTTGTTTTATT
774 AATGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * * * * *
2600120 TAAGAGACAAACATTGATTCTGTCAAAAACGGTGGAAGGAAAAGCTTTTCTTGTGACATCAATGC
839 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGC
* * *
2600185 GTCAATGTT--TGTATCTTAATGAAGGGAATGTGTTTTGGCT-TCACAA
904 ATCAAT-TTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCT-A-AT
* * * * * *
2600231 TCTTG-AAAAAACT-GAGATAGTTACGAGAATCGAT-TCTGGTCTTATTTAAGGTATGAACATTG
1 TCTCGTAAAGAA-TGGAGATTGTTACGAGAATCGATGCCT-GTCTTATTTAAGGGATGAACTTTG
* *
2600293 ATTTAAAGGAAAATAGGGCAAAAAAAAGATTCCCATGCAAAAGAAAATCATCAATATCATTTATC
64 ATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATC
* * *
2600358 CTAATGAGGTGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTATTAAAATCCA
129 CTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCA
* * * *
2600423 TGTTTGTCTCTTTTGAGGCACGAACGT-AGACTTTACAAAAAATGGTAGGAAAAAAGCCTTTGTT
194 TGTTTGTCTCTTTTGAAGCACGAAC-TCAGACTTTA-TAAAAATGGTGGGAAAAAAGCCTTTCTT
* * * * * *
2600487 -AAGAAATGAAAGCATCAATGTGATGTATCATGAA-GAGAAGACTATGTTTATGGTGCCTAATCC
257 GCA-AAACGAAAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATCT
* * *
2600550 GAAAAAGAATGGGGATTAG-ATTGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTC
320 GGAAAAGAAAGGGGATTAGTA-TGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTC
** * *
2600614 TATCAAAATGGGTGGAAGGAAAAGTTTTTCTTGTGACACCAAAGCATCAATTTAATGTATCCTAA
384 TATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAA
* * * * * * * *
2600679 GGAAGGGAATGTTTTTTGGCTCCGAT--TCTCGTAAAGAA-TGGAGATTGTTACGAAAATCGATC
449 TGAAGGGAATGTGTTTTGGCTTC-ATAATCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATT
* * * * * * *
2600741 CCTGTCTTATTTAAGGGATAAACTATGATTTAAAAGAAAATAAGGCAAAGAAAAGATTTTCGTGC
512 CTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGC
* * * * *
2600806 AAAAGAAAATCATCAATATTATTTATCCTAATAAGAAGAATGTGTTGATAGTGCCTAATAACAAA
577 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAA
* * *
2600871 ATGAATGAAGATTATTACTAGAATCCATGTTTGTCTCATTTGTG-A-CATGAACTTAGACTTTAC
642 ATGAATGAAGATCATTACTAGAATCCATGTTTGTCTC-TTT-TGAAGCACGAACTTAGACTTTAT
** * * * *
2600934 ACAATTTGGTGGGAAAAAAGCCTTTCCTGCAAAACGAAAGCTTCAATATTATGTATCCTAAAGAG
705 A-AAAATGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAG
* * * * ***
2600999 AAAACTATGTTTATAGAGCC-ATATCCT-GAAAAGAATTAGGATTAGTAT-ACGTATTCATGTTT
769 AAGACAATGTTTATGGTGCCTA-AT-CTGGAAAAGAAAGGGGATTAGTATGA-GTATTCATGTTT
* * * * * * *
2601061 GTCTCATTGAAAAGACAAACTTTGATTCTATCAAACATGGTGGAAGGAAAATTTTTTCTTGCGAC
831 GTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGAC
* * * *
2601126 ACCAAAGCATCAATTTCATGCATCTTAAGGAAGGGAATGTGTTTTGGCT-TCGAT
896 ACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCT-AAT
* * * * ** * *
2601180 TCTCGTAGAGATTGGAGATTGTTACAAGAATCAAAACTTGCCTTATTTAAGGGATGAACTTTGAT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
* * ** * * *
2601245 TTAAAGGAAAATATGGCAAAGAAAAGATTCCCACACCACAGAAAATCATCAATATTATTTATCCT
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
* * * * * * *
2601310 AATGAAGTGAATGCGTTTATAGAGCCTAATCACCAAATGAATAAAGATTATTACTAGAATCCATG
131 AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
* * * * * * **
2601375 TTTGTCTTTTTTGAAGCACGAACTTAGACATTACAAAAAATGGTGAGAAAAAAGTCTTTCTTGTG
196 TTTGTCTCTTTTGAAGCACGAACTCAGACTTTA-TAAAAATGGTGGGAAAAAAGCCTTTCTTGCA
* * * * **
2601440 AAATGAAGGCATCAATATGATGTATCGTAATGAAAAGACAATGTTTATGGTGCCTAATCCAGAAA
260 AAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAA
* * *
2601505 AGAATA-GGGATAAGTATGAGCATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAA
325 AGAA-AGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCA
* * * ** * *
2601569 AAAACGGGGGAAAGAAAAGTTTTTCTTGCGACCCCAAAACATCAATTTCATGTATCCTAATTAAG
389 AAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAATGAAG
* * * * * *** * *
2601634 GGAATGTGTTTTGGCTTTACAATGTTGAAAAGAACTGAGACAGTTATGTTTATCAATGCTTGTCT
454 GGAATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTTGTCT
* * *
2601699 TATATAAGGGATAAACTTTGATTTAAAGGAAAACAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
519 TATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAA
* * ** *
2601764 AATCATCAATATTATTTATCCTAATGAGGAGATTGCATTTATAGTGCCTAGTCACAAAATGAATG
584 AATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATG
* * * *
2601829 AAGATCGTTACTATAATCCATGTTTATCTCATTTGAAGCACGAACTTAGACTTTA-AAAAATTTG
649 AAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAA--TG
* * *
2601893 GTTGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATACGATGTATCCTAAAGAGAAGACAAT
712 GTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAAT
* * * *
2601958 ATTTATGCTGCCTTATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
777 GTTTATGGTGCCTAAT-CTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * * * *
2602022 TGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAATGTTTTTCTTGTGACATCAAAGCAT
841 AGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGCAT
*
2602087 CAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCT-TCACAA
906 CAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCT-A-AT
* * * * * * * * * * * *
2602132 TCTTGAAAAGAATTGAGATAGTTATGAGAATCGATTCTTGTCTTATTTATGGTATGAACATCGTT
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
* *
2602197 TTAAAGGAAAATA-TGCAAAGAAAAGA-TTCCAATGCAAAAGAAAATCATCAATTTCATTTATCC
66 TTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATGCAAAAGAAAATCATCAATATCATTTATCC
* * * * *
2602260 CAATGAGGAGAATATGTTTATAGTGCCGAATCGCAAAATGAATGAAGATCATTACTAGAATCCAA
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * * * *
2602325 GTTTGTCTCATTTGAAGCACAAACTTAGACTTCACAAAAAATGGTGGGAAAAAAGCCTTTCTTGC
195 GTTTGTCTCTTTTGAAGCACGAACTCAGACTTTA-TAAAAATGGTGGGAAAAAAGCCTTTCTTGC
* * * * * *
2602390 AAAATGTAAGCATCAATACGATGTATCCTAATGAAAAGACAATGATTATGGTGCCTAATCCAGG-
259 AAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CTGGA
* * * * * * * *
2602454 AAAGAATGCGGATTAGTATAATTATTCATGTTTCTCATATTTAAGAGACAAACTTTGATTTTATA
323 AAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATC
* * * * *
2602519 AAAAACAGTGGAAGGAAAAGTTTTTCTT-TCATCACCAAAGCATCAAATTCATGTATCCTAAGGA
388 AAAAACGGTGGAAGGAAAAGTTTTTCTTGTGA-CATCAAAGCATCAATTTCATGTATCCTAATGA
* * * * * *
2602583 AGGGAATGTGTTTTGGCTTCGAT--TCTCGTAAAG-ATTGGAGATTGTTACGAGAATCAATACTT
452 AGGGAATGTGTTTTGGCTTC-ATAATCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATTCTT
* * *
2602645 GACTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTCCCACGCAAA
515 GTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAA
* * *
2602710 AGAAAATCATCAATATCATTTATCCTAATGAGGTGAATGTATTTATAGTGCCTAATCACAAAATC
580 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * *
2602775 AATGACGATCATTACTAGAATCCATGTTTGTCTCTTTCGAAGCATGAACTTAGACTTTATAAAAA
645 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTAT-AAAA
* * * * *
2602840 ATGGTGAGAATAAAGCCTTTCTTGCGAAACAAAAGCATCAATATGATGTATCATAATGAGAAGAC
709 ATGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGAC
* *
2602905 AATGTTTATGGTGCCTAATCTGGAAAAGAATA-GAGATTAGTATGAGTATTCATGTTAGTCTTAT
774 AATGTTTATGGTGCCTAATCTGGAAAAGAA-AGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * * * * *
2602969 TTTAGAGAATAAACTTTCATTCTATCGAAAACAGTGGAAAGAAAAGTTTTCCTTGTGACACCAAA
838 TTAAGAG-ACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAA
* * * *
2603034 GCATCAATTTCATATAT-CTGAATAAAAGGAATGTGTTTTGGCTTCACAAT
902 GCATCAATTTCATGTATCCT-AATGAAGGGAATGTGTTTTGGC-TC-TAAT
* *** ** * * *
2603084 GT-T-GAAAAGAAAAAAGACAGTTACGAGAATCGATGCTTGTCTTATATAAGGGATGAGCTTTGA
1 -TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGA
* *
2603147 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCTATGCAAAAGAAAATCATTAATATCATTTATCC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
* * * *
2603212 TAATGAGGAGAATGCGTTTATAGTGCCTAATCACAAAATGAATGAAAATCATTACTAGTATCCAC
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* ** * **
2603277 GTTTGTCTCATGGGAGGCACGAACTTGGACTTTA-AAAAATTTGGTGGGTAAAAAA-CCTTTCTT
195 GTTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAA--TGGTGGG-AAAAAAGCCTTTCTT
* * * * * * *
2603340 GCAAAACGAAAGCATCAAAACGATGTATCCTAAAGAGAAGACAATATATATGTTGCCTTATCCT-
257 GCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CTG
* * *
2603404 GAAAAG-AATGGGATTAATATGAGTATTCATGTTTGTCTTATTTATGAGACAAACTTTGATTCTA
321 GAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA
* * *
2603468 TCAAAAATGGTGGAAGGAAAAGTTTTTCTTGTGACATTAAAGCATCAATGTCATGTATCCTAATG
386 TCAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAATG
* * * *
2603533 AAGGGATTGTGATTTGGCTTCACAATCTTGAAAAGAA-TAGAGATAGTTACGAGAATCTATTCTT
451 AAGGGAATGTGTTTTGGCTTCATAATCTTGAAAAGAACT-GAGATAGTTACGAGAATCGATTCTT
* * * * * * *
2603597 ATCTTATTTATGGTATGAACATCGTTTTAAAGGAAAATA-TGCAAAGAAAAGA-TTCCAATGCAA
515 GTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATGCAA
* * * *
2603660 AAGAAAATCATCAATATCATTTATCCCAATGAGGAGAATATGTTTATAGTGCCGAATCGCAAAAT
579 AAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * * *
2603725 GAATGAAGATCATGACTAGAGTCCAAGTTTGTCTCATTTGGAGCACGAACTTAGACTTT-TCAAA
644 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTAT--AA
* * * * * *
2603789 AAATGGTGGGAAAAATGCCTTTCCTACGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAGG
707 AAATGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAG
* * *** * * * * *
2603854 ACTATGTTTATGGTGCCTTATCCAAAAAAGAATGGGGGTTAGTATGAGTATCCATGTTTGCCTTT
772 ACAATGTTTATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * * *
2603919 TTTAAAAGACAAACTTTGATTTTATCAAAAACGGTGGAAGGGAAAGTTTTTCTTGCGACATCAAA
837 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAA
* *
2603984 GCATCAATTTCATGTCTCCTAATGAAGGGAATGTGTTTTGGCT-TCACAA
902 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCT-A-AT
* * * * * * * * *
2604033 TCTTGAAAAGGATTGAGATAGTTACGAGAATC-AGTGCTTGTGTTTTTTAAGAGATGAACTTTGA
1 TCTCGTAAAGAATGGAGATTGTTACGAGAATCGA-TGCCTGTCTTATTTAAGGGATGAACTTTGA
* * *
2604097 TTTAAA-G--AAT--TG---AG-ATAG--TTCCATGC-AAA-AAAATCATCAATATCTTTTATCC
65 TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCC
** * *
2604149 TAATGAGGAGAATGCATTTATAGTGCCTAATCACAAAATAAATGAAGATCATTACTAGAATCCAC
130 TAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCAT
* * * *
2604214 ATTTGTCTCATTTGAGGCACGAAC-CTAGACTTTA-AAAATTTGGTGGGAAAAAAGCCTTTCTTG
195 GTTTGTCTCTTTTGAAGCACGAACTC-AGACTTTATAAAA-ATGGTGGGAAAAAAGCCTTTCTTG
* * * *
2604277 CGAAATGAAAGCATCAATACGATGTATCCTAAAGAGAAGACTTTCCTAAAGAGAAGACTATGTTT
258 CAAAACGAAAGCATCAATATGATGTATCCT-------A-A------T---GAGAAGACAATGTTT
* ** * * * * * *
2604342 GTATTGCCTTATCTTGAGAAGAATGGGGATTAGTATGAGTATTCATGTTTATCATATTTAAGAGA
306 ATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGA
* * * * * ** *
2604407 CAAACTTTGATTTTATCAAAAATGGTGGAAGCAAAAGTGTTTCTTGCGACCCCATAGCATCAATT
371 CAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATT
* * * * ** * ** *
2604472 TGACGTATCCTATTGAAGGGAATGTG-TTTGTC-TCCCAATC-TCATAAAGAAAGGAGATTGTTA
436 TCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCATAATCTTGA-AAAGAACTGAGATAGTTA
* * *
2604534 CGAGAATTGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAA
500 CGAGAATCGATTCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAA
* * * * * *
2604599 AGATTTACATGCAAAAGAAAATCATCAATATCATTCATCCTAATCAGGAGACTGTGTTTATGGTA
565 AGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTG
* * * * *
2604664 CCTAATCCCAAAATGAATGAAGATCATTACTAGAATCTAAGTTTGTCTCATTTGAGGCACGAACT
630 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACT
* * * *
2604729 CAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTA
695 TAGACTTTA-TAAAAATGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTA
**
2604794 TTTTGAA-GAGAAGA-ATATGTTTATGGTGC
759 TCCT-AATGAGAAGACA-ATGTTTATGGTGC
2604823 TGTATCTTGA
Statistics
Matches: 16567, Mismatches: 1931, Indels: 632
0.87 0.10 0.03
Matches are distributed among these distances:
935 6 0.00
936 43 0.00
937 116 0.01
938 62 0.00
939 418 0.03
940 273 0.02
941 83 0.01
942 24 0.00
943 1 0.00
944 13 0.00
945 810 0.05
946 380 0.02
947 767 0.05
948 2583 0.16
949 4592 0.28
950 1819 0.11
951 2820 0.17
952 1381 0.08
953 256 0.02
954 120 0.01
ACGTcount: A:0.37, C:0.13, G:0.19, T:0.31
Consensus pattern (949 bp):
TCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCCTGTCTTATTTAAGGGATGAACTTTGAT
TTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCT
AATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATG
TTTGTCTCTTTTGAAGCACGAACTCAGACTTTATAAAAATGGTGGGAAAAAAGCCTTTCTTGCAA
AACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCTGGAAAA
GAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
AACGGTGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAATGAAGGG
AATGTGTTTTGGCTTCATAATCTTGAAAAGAACTGAGATAGTTACGAGAATCGATTCTTGTCTTA
TTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
GATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTATAAAAATGGTGG
GAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTT
ATGGTGCCTAATCTGGAAAAGAAAGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGA
CAAACTTTGATTCTATCAAAAACGGTGGAAAGAAAAGTTTTTCTTGCGACACCAAAGCATCAATT
TCATGTATCCTAATGAAGGGAATGTGTTTTGGCTCTAAT
Found at i:2599207 original size:158 final size:158
Alignment explanation
Indices: 2599045--2600172 Score: 366
Period size: 158 Copynumber: 7.1 Consensus size: 158
2599035 TAAAAAATTT
*
2599045 GGTGGGAAAAAAGCCTTTCTTGCAAAATGAAAGCATCAAAATGATGTATCCTCATGAGAAGACAA
1 GGTGGGAAAAAAGCCTTTCTTGCAAAATGAAAGCATCAAAATGATGTATCCTAATGAGAAGACAA
* *
2599110 TGTTTATAGTGCCTAATTTGGAAGAGAATGGCGATTAGTATGAGTTTTCATGTTTGTCTTATTTA
66 TGTTTATAGTGCCTAATTTGGAAGAGAATGGAGATTAGTATGAGTATTCATGTTTGTCTTATTTA
2599175 AGAGACAAACATTGATTCTGTCAAAAAC
131 AGAGACAAACATTGATTCTGTCAAAAAC
* ** * * * * * *
2599203 GGT-GGAAGGAAAAGCTTTTCTTGTGATATCAATGCATC--AATGTTTGTATCTTAAT--GAAGG
1 GGTGGGAA--AAAAGCCTTTCTTGCAAAATGAAAGCATCAAAATG-ATGTATCCTAATGAGAAGA
* * * * * * *
2599263 GAATGTGTTTTGGCTTCAC-AATCTT-TAA-A-AACT-GAGA-TAGTTACGAG-AATCGAT-TCT
63 CAATGT-TTATAG-TGC-CTAAT-TTGGAAGAGAA-TGGAGATTAG-TATGAGTATTC-ATGT-T
* ** *
2599320 GGTCTTATTTAAG-GTATGAACATTGATT-TAAAG-GAAAATA-
120 TGTCTTATTTAAGAG-ACAAACATTGATTCT---GTCAAAA-AC
** * * * * * * * **
2599360 GG-GCAAAAAAAAG-ATTCCCATGCAAAA-GAAAATCATCAATATCATTTATCCTAATGAGGTGA
1 GGTG-GGAAAAAAGCCTT-TCTTGCAAAATG-AAAGCATCAAAATGATGTATCCTAATGAGAAGA
* *** * * * * * ** * * *
2599422 -ATGTGTTTATAGTGCCTAA-TCACAAAATGAATGAAGATCATTATTAAAATCCACGTTTGTCTC
63 CA-ATGTTTATAGTGCCTAATTTGGAAGA-GAATGGAGATTAGTATGAGTATTCATGTTTGTCTT
* * * *
2599485 ATTT--GAGGCATGAAC-TTAGA--CTTTAAAAAATTT
126 ATTTAAGAGACA--AACATT-GATTCTGTCAAAAA--C
* *
2599518 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAAAATGATGTATCCTCATGAGAAGACAA
1 GGTGGGAAAAAAGCCTTTCTTGCAAAATGAAAGCATCAAAATGATGTATCCTAATGAGAAGACAA
* *
2599583 TGTTTATAGTGCCTAATTTGGAAGAGAATGGCGATTAGTATGAGTTTTCATGTTTGTCTTATTTA
66 TGTTTATAGTGCCTAATTTGGAAGAGAATGGAGATTAGTATGAGTATTCATGTTTGTCTTATTTA
2599648 AGAGACAAACATTGATTCTGTCAAAAAC
131 AGAGACAAACATTGATTCTGTCAAAAAC
* ** * * * ** * * *
2599676 GGT-GGAAGGAAAAGCTTTTCTTGTGACATCAATGTGTC--AATGTTTGTATCTTAAT--GAAGG
1 GGTGGGAA--AAAAGCCTTTCTTGCAAAATGAAAGCATCAAAATG-ATGTATCCTAATGAGAAGA
* * * * * * *
2599736 GAATGTGTTTTGGCTTCAC-AATCTT-GAA-AAAACT-GAGA-TAGTTACGAG-AATCGAT-TCT
63 CAATGT-TTATAG-TGC-CTAAT-TTGGAAGAGAA-TGGAGATTAG-TATGAGTATTC-ATGT-T
* ** *
2599794 GGTCTTATTTAAG-GTATGAACATTGATT-TAAAG-GAAAATA-
120 TGTCTTATTTAAGAG-ACAAACATTGATTCT---GTCAAAA-AC
** * * * * * * * **
2599834 GG-GCAAAAAAAAG-ATTCCCATGCAAAA-GAAAATCATCAATATCATTTATCCTAATGAGGTGA
1 GGTG-GGAAAAAAGCCTT-TCTTGCAAAATG-AAAGCATCAAAATGATGTATCCTAATGAGAAGA
* * *** * * * * * ** * * *
2599896 -ATGTGTTTATTGTGCCTAA-TCACAAAATGAATGAAGATCATTATTAAAATCCACGTTTGTCTC
63 CA-ATGTTTATAGTGCCTAATTTGGAAGA-GAATGGAGATTAGTATGAGTATTCATGTTTGTCTT
* * * *
2599959 ATTT--GAGGCATGAAC-TTAGA--CTTTAAAAAATTT
126 ATTTAAGAGACA--AACATT-GATTCTGTCAAAAA--C
* *
2599992 GGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAAAATGATGTATCCTCATGAGAAGACAA
1 GGTGGGAAAAAAGCCTTTCTTGCAAAATGAAAGCATCAAAATGATGTATCCTAATGAGAAGACAA
* * *
2600057 TGTTTATAGTGCCTAATTTGGAAGAGAATGGCGATTAGTATGAGTTTTCATGTTTGTTTTATTTA
66 TGTTTATAGTGCCTAATTTGGAAGAGAATGGAGATTAGTATGAGTATTCATGTTTGTCTTATTTA
2600122 AGAGACAAACATTGATTCTGTCAAAAAC
131 AGAGACAAACATTGATTCTGTCAAAAAC
*
2600150 GGT-GGAAGGAAAAGCTTTTCTTG
1 GGTGGGAA--AAAAGCCTTTCTTG
2600173 TGACATCAAT
Statistics
Matches: 662, Mismatches: 201, Indels: 213
0.62 0.19 0.20
Matches are distributed among these distances:
155 13 0.02
156 92 0.14
157 106 0.16
158 266 0.40
159 146 0.22
160 39 0.06
ACGTcount: A:0.36, C:0.12, G:0.20, T:0.32
Consensus pattern (158 bp):
GGTGGGAAAAAAGCCTTTCTTGCAAAATGAAAGCATCAAAATGATGTATCCTAATGAGAAGACAA
TGTTTATAGTGCCTAATTTGGAAGAGAATGGAGATTAGTATGAGTATTCATGTTTGTCTTATTTA
AGAGACAAACATTGATTCTGTCAAAAAC
Found at i:2604325 original size:17 final size:17
Alignment explanation
Indices: 2604303--2604335 Score: 66
Period size: 17 Copynumber: 1.9 Consensus size: 17
2604293 ATACGATGTA
2604303 TCCTAAAGAGAAGACTT
1 TCCTAAAGAGAAGACTT
2604320 TCCTAAAGAGAAGACT
1 TCCTAAAGAGAAGACT
2604336 ATGTTTGTAT
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 16 1.00
ACGTcount: A:0.42, C:0.18, G:0.18, T:0.21
Consensus pattern (17 bp):
TCCTAAAGAGAAGACTT
Found at i:2605163 original size:346 final size:346
Alignment explanation
Indices: 2604510--2605168 Score: 1018
Period size: 346 Copynumber: 1.9 Consensus size: 346
2604500 TGTCTCCCAA
* *
2604510 TCTCATAAAGAAAGGAGATTGTTACGAGAATTGATGCTTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCATAAAGAAAGGAGATTGTTACGAGAATCGATACTTGTCTTATTTAAGGGATGAACTTTGAT
* * * *
2604575 TTTAAGGAAAATAGGGCAAAGAAAAGATTTACATGCAAAAGAAAATCATCAATATCATTCATCCT
66 TTAAAGGAAAATAAGGCAAAGAAAAGATGTACACGCAAAAGAAAATCATCAATATCATTCATCCT
* * * * *
2604640 AATCAGGAGACTGTGTTTATGGTACCTAATCCCAAAATGAATGAAGATCATTACTAGAATCTAAG
131 AATCAGGAGAATGTGTTTATAGTACCTAATCCCAAAACGAAAGAAGATCATTACTAGAATCCAAG
*
2604705 TTTGTCTCATTTGAGGCACGAACTCAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCG
196 TTTGTCTCATTTGAAGCACGAACTCAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCG
** *
2604770 AAATGAAAGCATCAATATGATGTATTTTGAAGAGAAGAATATGTTTATGGTGCTGTATCTTGAAG
261 AAATGAAAGCATCAATATGATGTATCCTGAAAAGAAGAATATGTTTATGGTGCTGTATCTTGAAG
2604835 GGAATATGTTTTGGCTTTGAT
326 GGAATATGTTTTGGCTTTGAT
* * *
2604856 TCTCGTAAAGAATGGGGATTGTTACGAGAATCGATACTTGTCTTATTTAAGGGATGAACTTTGAT
1 TCTCATAAAGAAAGGAGATTGTTACGAGAATCGATACTTGTCTTATTTAAGGGATGAACTTTGAT
*
2604921 TTAAAGGAAAATAAGGCAAAGAAAAGATGTCCACGCAAAAGAAAATCATCAATATCATTCATCCT
66 TTAAAGGAAAATAAGGCAAAGAAAAGATGTACACGCAAAAGAAAATCATCAATATCATTCATCCT
* * * * *
2604986 AATGAGGAGAATGTGTTTGTAGTGCCTGA-CCACAAAACGAAAGAAGATCATTACTAGAATCCAT
131 AATCAGGAGAATGTGTTTATAGTACCTAATCC-CAAAACGAAAGAAGATCATTACTAGAATCCAA
* * * *
2605050 GTTTGTCTCTTTTGAAGCATGAACTTAGACTTTACAAAAAATGTTGGGAAAAAAGCCTTTCTTGC
195 GTTTGTCTCATTTGAAGCACGAACTCAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGC
2605115 GAAATGAAAGCATCAATATGATGTATCCT-AACAAGAAGACAT-TGTTTATGGTGC
260 GAAATGAAAGCATCAATATGATGTATCCTGAA-AAGAAGA-ATATGTTTATGGTGC
2605169 CTAATCCAGA
Statistics
Matches: 282, Mismatches: 28, Indels: 6
0.89 0.09 0.02
Matches are distributed among these distances:
345 4 0.01
346 276 0.98
347 2 0.01
ACGTcount: A:0.37, C:0.13, G:0.20, T:0.30
Consensus pattern (346 bp):
TCTCATAAAGAAAGGAGATTGTTACGAGAATCGATACTTGTCTTATTTAAGGGATGAACTTTGAT
TTAAAGGAAAATAAGGCAAAGAAAAGATGTACACGCAAAAGAAAATCATCAATATCATTCATCCT
AATCAGGAGAATGTGTTTATAGTACCTAATCCCAAAACGAAAGAAGATCATTACTAGAATCCAAG
TTTGTCTCATTTGAAGCACGAACTCAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCG
AAATGAAAGCATCAATATGATGTATCCTGAAAAGAAGAATATGTTTATGGTGCTGTATCTTGAAG
GGAATATGTTTTGGCTTTGAT
Found at i:2607869 original size:474 final size:476
Alignment explanation
Indices: 2604830--2612165 Score: 8660
Period size: 474 Copynumber: 15.5 Consensus size: 476
2604820 TGCTGTATCT
* ** * * * * *
2604830 TGAAGGGAATATGTTTTGGCTT-TGATTCTCGTAAAGAATGGGGATTGTTACGAGAATCGATACT
1 TGAAGGGAATGTGTTTTGGCTTCACAATCTAGAAAAGAATGGAGATTGTTACGAGAATCGATGCT
* * *
2604894 TGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAAGGCAAAGAAAAGATGTCCACGCAA
66 TGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAA
* * * * *
2604959 AAGAAAATCATCAATATCATTCATCCTAATGAGGAGAATGTGTTTGTAGTGCCTGACCACAAAAC
131 AAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * *
2605024 GAAAGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCATGAACTTAGACTTTACAAAA
196 GAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAA
* *
2605089 AATGTTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCTAACA-AGAAG
261 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAA-AGAGAAG
* * *
2605153 AC-ATTGTTTATGGTGCCTAATCCAGAAAAGAATGGGGATTAGTATAAGTATTCATGTTTGT-TT
325 ACTA-TGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
** * * *
2605216 ATTTGTGAGACAAACCTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTT-CGACGTCAA
389 ATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAA
** * ** *
2605280 AGTGTCAATGTCATGTATTTTAG
454 AGCATCAATTTCATGTATCCTAA
* ** * * * * * ** *
2605303 TGACGAAAATGTGTTTTAGTTTCATAATCTTGAAAGGAACT-GAGACAGTTACGAGAATCGATTC
1 TGAAGGGAATGTGTTTTGGCTTCACAATCTAGAAAAGAA-TGGAGATTGTTACGAGAATCGATGC
* * * *
2605367 TTGTCTTATTTAAGGTATGAACATCGTTTTAAAGGAAAATA-GGCAAAGAAAAGA-TTCCAATGC
65 TTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATGC
* * * *
2605430 AAAAGAAAATCATCAATATCATTTATTCTAATCAGGAGAATATGTTAATAGTGCCTAATCACAAA
129 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAA
* * * ** * *
2605495 ATTAATAAAGATCATTACTAGAATCCAAGTTTATCTCAATTGAAGCATGAACTTAGACTTTACCA
194 ATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAA
* * * * *
2605560 AAAATGCTGGG-AAAAAGCCTTTCTTGTGAAACAAAAGAATCAATATGATGTATCCTGAAGAGAA
259 AAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAA
* * * *
2605624 GAC-----TT-T-GT---TTAT-CTGAAAAGAATAGGGATTAGTATGAGTATTTAGGTATGTCTT
324 GACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* * * * * **
2605678 ATTTAAAAGACAAACTTTGATCCTATCAAAAAAGATGGAAGGAAAAGTTTTTCTTGCGGCCCCAA
389 ATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAA
2605743 AGCATCAATTTCATGTATCCTAA
454 AGCATCAATTTCATGTATCCTAA
* * * * * * ** * *
2605766 TGACGAGAATCTG-TTTGTC-TCCCAATCTCA-TAAAGAAAAGAGATTGTTACCAGAATTGATGC
1 TGAAGGGAATGTGTTTTGGCTTCACAATCT-AGAAAAGAATGGAGATTGTTACGAGAATCGATGC
* * * * *
2605828 TTGTCTTATTTAAGGGATGAAATTTGATTTTAAGGAAAACATGGCAAAGAAAAGATTTCCCTGCA
65 TTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCA
* * * *
2605893 AAAGAAAATCCTCAATATCATTTATCCTAATAAGGGGAATGTGTTTATAGTGCCTAATCAGAAAA
130 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA
* * * *
2605958 TGAATAAAGATCATTACTAGAATCCAAATTTGTCT-TATTTGAGGCACAAACTTAGACTTTACAA
195 TGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCT-TTTGAAGCACGAACTTAGACTTTACAA
* * * * * * **
2606022 AAAATGGTGGGAAAAAAGCCTTTCATACAAAACTAAAGCATCATTATGATGCATTGTAAAGAGAA
259 AAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAA
* * *
2606087 GACAATGTTTATGATGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTTATGTTTGTCTT
324 GACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* * *
2606152 ATTTAAGAGACAGACTTTGAGTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCAACATCAA
389 ATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAA
*
2606217 AGCATCAATTTCATGTATCCTAG
454 AGCATCAATTTCATGTATCCTAA
* ** ** *
2606240 CGAAGGGAATGTGTTTTGGCTTCACAATCTTTAAAAGAACT-GAGACAGTTACGAGAATCGATTC
1 TGAAGGGAATGTGTTTTGGCTTCACAATCTAGAAAAGAA-TGGAGATTGTTACGAGAATCGATGC
* * * * * * *
2606304 TTATCTTTTTTAAGGTATGCAC-ATCATTTTAAAGGAAAATA-GGCAAAGAAAAGA-TTCCTAGG
65 TTGTCTTATTTAAGGGATGAACTTTGA-TTTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATG
* ** **
2606366 CAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATACTTATAGTGCCTAATCGGAA
128 CAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAA
* ** * *
2606431 AATGAATGAAGATCATTATTAGAATCCAAGTTTGTCTCAATTGAGGCACGAACCTAGAC-TT-CA
193 AATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACA
* * * *
2606494 AAAAATTTGGTGGGAAAAAAAGCCTTTCTTGCAAAATGAAAGCATCAATACGATGTATCTTAAAG
258 AAAAA--TGGTGGG-AAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAG
* * * *
2606559 AGAAGACTATGTTTATGTTGCCTTATCTTGAAAAGAATAGGGATTAGTATGAGTGTTCATGTTTG
320 AGAAGACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTG
* * * * * *
2606624 TCATATTTAAGGGACAAACTTTGATTCTACCTAAAATAGTGGAAGG-AAAGTTTTTCTTGCGACC
385 TCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACA
* * * *
2606688 CCAAAGAATCAATTTCATATATTCTAA
450 TCAAAGCATCAATTTCATGTATCCTAA
* * * * * * ** *
2606715 TGAAGGAAATGTGTTTTGGC-TCCCAATCTCA-TAAAGAAAGGAGATTGCTATGAGAATTAATGG
1 TGAAGGGAATGTGTTTTGGCTTCACAATCT-AGAAAAGAATGGAGATTGTTACGAGAATCGATGC
* * *
2606778 TTGTCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAGGCCAAAGAAAAGATTTCCATGCA
65 TTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCA
* * * **
2606843 AAAGAAAATCATCAATTTCTTTTATCCTAATGAGGGGAATGTGTTTATAGTGCCTAATTGCAAAA
130 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA
* * *
2606908 TGCATGAAGATCATTGCTAGAATCCAAGTTTGTCTCATTTGAAGCACGAACTTAGACTTTACAAA
195 TGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAA
** *** * *
2606973 AAATGGTGAAAAAAAAGCCTTTCTTATAAAACGAAAGCATCAATATGATGTATCCTAAACAGAGG
260 AAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* * *
2607038 ACTACGTTTATGGTGCCTTATCCTGAAAAGAATGGGGGTTAGTATGAGTATCCATGTTTGTCTTA
325 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* *
2607103 TTTAAGAGACAAACTTTGATTCTATC-AAAA----GGAAGGAAATGTTTTTCTTGTGACATCAAA
390 TTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAA
* *
2607163 GCATCAATTTCATGTCTCTTAA
455 GCATCAATTTCATGTATCCTAA
* * * * * *
2607185 TAAAGGGAATTTATTTTGGCTTGACAATCTTGAAAAGAACT-GAGACTGTTACGAGAATCGATGC
1 TGAAGGGAATGTGTTTTGGCTTCACAATCTAGAAAAGAA-TGGAGATTGTTACGAGAATCGATGC
** * * * * * *
2607249 TTACCTTTTTTAAGGGAT-TACTTTGATTTAAAGGAAAATACGACAAAAAAAAGATTTCCATCCA
65 TTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCA
* * *
2607313 AAA-AAAATCATCAACATCTTTTATCCTAATGAGGAGAATGCGTTTATAGTGCCTAATCACAAAA
130 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA
* * * * * * *
2607377 TAAATGAAGATCATTACTAGGATCCACGTTTGTCTCATTTGAGGCATGAACCTAGACTTTA-AAA
195 TGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAA
* * * * *
2607441 AATTTGGTGGGAAAAAAGTCTTTCTTGCCAAATGAAAGCATCAATACGATGTATCCTAAAGAGAA
260 AA-ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAA
* * * * * * *
2607506 CACTATGTTTATGTTGCCTTATCCTGAAACGAATGGGGGTTAGTATGAATACTCATGTTTGTCAT
324 GACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* * **
2607571 ATTTAAGAGACAGACTTTGATTCTATAAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACCCCAA
389 ATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAA
* *
2607636 AG-AGTCAATTTCTTGTATCCTAT
454 AGCA-TCAATTTCATGTATCCTAA
* * * * *
2607659 TGAAGGGAATGTGTTTTGGCTTCATAATCTAGAAAAGAATTGAGATAGTTACGAAAATCGATACT
1 TGAAGGGAATGTGTTTTGGCTTCACAATCTAGAAAAGAATGGAGATTGTTACGAGAATCGATGCT
* * **
2607724 TGTCTTATTTAAGGTATGAACATCAATTTAAAGGAAAATA-GGCAAAGAAAAGA-TTCCAATGCA
66 TGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATGCA
* ** *
2607787 AAAG-AAATCATCAATATCATTTATCCTAATGAGGGGAATACGTTTATAGTGCCTAATCGCAAAA
130 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA
* * *
2607851 TGAATGAAGATTATTACTAGAATCCAAGTTTGTCTCATTTGAAGCACGAACTTAGACTTTACCAA
195 TGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAA
* * * *
2607916 AAATGGTGGGAAAAAAAGCCTTTCCTGCAAAACGAAGGCATCAATATGATGTATCCTAAAGGGAA
260 AAATGGTGGG-AAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAA
* * * * * *
2607981 AACAATGTTTATGGTGCATAATCCAGAAAAGAATGGGGATTAGTATAAGTATTCATGTTTGTCTT
324 GACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* * * ** *
2608046 ATTTATGAGACAAACTTTGATTCTATCAAAAAAGGTGGAAGGAAAAGTTTTTCTTGCAACCCCGA
389 ATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAA
2608111 AGCATCAATTTCATGTATCCTAA
454 AGCATCAATTTCATGTATCCTAA
* * * *
2608134 TGAAAGGGAATGTGTTTTGGC-TC-CGATTCTCGTAAAGAATGGAGATTGTTAGGAGAATCGATG
1 TG-AAGGGAATGTGTTTTGGCTTCAC-AATCTAGAAAAGAATGGAGATTGTTACGAGAATCGATG
* * * * * *
2608197 CTTGTCCTATTTATGAGATAAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGTTTTCTATGC
64 CTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGC
* * * * *
2608262 AAAAAAAAATCATTAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAACCATAAC
129 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAA
* * * *
2608327 ATAAAAGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGGACTTAGACTTTACAA
194 ATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAA
* * * * *
2608392 AAAATGGTGGGAAAAAAGCTTTTCTTGCAAAACCAAGGCATCAATATGATGTATCCTAATGAGAA
259 AAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAA
* ** * * *
2608457 GACAATGTTTATGGTGGATAATCCAGAAAAGAATGGGGATTAGTTTGAGTATTCATGTTTGTCTT
324 GACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* ** *
2608522 ATCTAAGAGACAAACTTTGATTCTAT-AAAAAACGTGGAAGGAAAAGTGTTTCTTGCGACCA-CA
389 ATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGA-CATCA
*
2608585 AAGCATCAATTTGATGTATCCTAA
453 AAGCATCAATTTCATGTATCCTAA
* * * * ** * *
2608609 TGAAGGGAATGTG-TTTGTC-TCCCAATCTCA-TAAAGAAAGGAGATTGTTACGATTATTGTTGC
1 TGAAGGGAATGTGTTTTGGCTTCACAATCT-AGAAAAGAATGGAGATTGTTACGAGAATCGATGC
* * * * * *
2608671 TTGTCTTACTTAAGGGATAAACTTTGATTTTAAGGAAAAAAGGGCAAAAAAAAAAAAGATTTTCA
65 TTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGC----AAAGAAAAGATTTCCA
* * *
2608736 TGCAAAAGAAAATCATCAATTTCATTTATCCTAATG-GGAAAAATGTGTTTATAGTGCCTAACCA
126 TGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGG-AGAATGTGTTTATAGTGCCTAATCA
* * * * *
2608800 TAACATGAAAGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACAAACTTAGACTTT
190 CAAAATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTT
* * * *
2608865 ACAAAAAATGGGGGGAAAAAAGCTTTTCTTGCAAAAC-AAAGGCATCAATATGATGTATCCTAAT
255 ACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAA-GCATCAATATGATGTATCCTAAA
* * * * * *
2608929 GAGAAGACAATGTTTGTGGTGCATAATCCAGAAAAGAATGGGGATTAGTGTGAGTATTCATGTTT
319 GAGAAGACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTT
* * *
2608994 GTCTTATTTATA-AAACAAACTTTGATTCTATGAAAAATGGTGGAAGGAAAAGTTTTTCTTGTGA
384 GTCTTATTTA-AGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGA
*
2609058 CATCAAAGCATCAATGTCATGTATCCTAA
448 CATCAAAGCATCAATTTCATGTATCCTAA
* * * * * * *
2609087 TGAAGGGATTGTGATTTGGCTTCACAATCTTGAAAAGAATAGAGATAGTTACGAGAATCTATTCT
1 TGAAGGGAATGTGTTTTGGCTTCACAATCTAGAAAAGAATGGAGATTGTTACGAGAATCGATGCT
* * * * * * *
2609152 TATCTTATTTATGGTATGAACATCGTTTTAAAGGAAAATA-TGCAAAGAAAAGA-TTCCAATGCA
66 TGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCC-ATGCA
* * *
2609215 AAAGAAAATCATCAATATCATTTCTCCTAATAAGGAGAATATGTTTATAGTGCCTAATCGA-AAA
130 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAA
* * *
2609279 ATGAAGGAAGATCATTACTAGAATCCATGTTTGTCTTTTTTGAAGCAC-AGACTTAGACTTTACA
194 ATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGA-ACTTAGACTTTACA
* * * * * ** *
2609343 AAAAATAGTGAGAGAAAAGCCTTTCTTGCAAAACAAAAGCATCAATACAACGTATCCTAAAG-GT
258 AAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAG-
* * * *
2609407 AAAACTATGATTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCACGCTTGTC
322 AAGACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
* * *
2609472 TTATTTAAGAGACAAACTTTGATTCGATC-AAAATCGGAGAAAGGAAAAGTTTTTCTTGCGACAT
387 TTATTTAAGAGACAAACTTTGATTCTATCAAAAAT-GGTGGAAGGAAAAGTTTTTCTTGCGACAT
*
2609536 CAAAGCATCAATGTCATGTATCCTAA
451 CAAAGCATCAATTTCATGTATCCTAA
** * * * *
2609562 TGAAGGGAATGTGTTTTGGCTT-TGATTCTCA-TAAAGAATGGAGATTGCTATGAGAATCGATGC
1 TGAAGGGAATGTGTTTTGGCTTCACAATCT-AGAAAAGAATGGAGATTGTTACGAGAATCGATGC
* *
2609625 TTGTCGTATTTAAGGGGTGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCA
65 TTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCA
* * * * * *
2609690 ACAGAAAATCACCAATATCATTTATCCTAATGAGGAGAATGCGTTTATAATGCCTAACCAAAAAA
130 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA
* * * * *
2609755 TGAATGAAGATCAATACTAGAATCCAAGTCTATCTCTTTT-AAGGCACGGAC--AGACTTCACAA
195 TGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAA-GCACGAACTTAGACTTTACAA
* * * * *
2609817 AAAAAGGTGGGAAAAAAGCGTTTCTTGCGAAACGAAAGCTTCAATGTGACGTATCCTAAAGAGAA
259 AAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAA
* * ** * *
2609882 GAATACGTTTAT-GTGCCAAAT-TTGGAAAAGAATGGAGATTAGTATGAGTATTCATGTTTGTCT
324 GACTATGTTTATGGTGCCTTATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCT
** * * *
2609945 TATTTAAGAGGTAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTGTTTCTTGCAACCA-C
388 TATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGA-CATC
* *
2610009 AAAGCATCAATTTGATGCATCCTAA
452 AAAGCATCAATTTCATGTATCCTAA
* * * * *
2610034 TGAAGGGAATGTG-TTTGTC-TCCCAATCTCA-TAAAGACA-GGAGATTGTTACGAGAATTGTTG
1 TGAAGGGAATGTGTTTTGGCTTCACAATCT-AGAAAAGA-ATGGAGATTGTTACGAGAATCGATG
* *
2610095 CATGTCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAAGATTTCCATGC
64 CTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGC
* * * *
2610160 AAAAGAAAATCATCAATTTCATTTATCCTAATGAGGGGAATGTATTTATACTGCCTAATCACAAA
129 AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAA
*
2610225 ATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAA
194 ATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAA
* * * *
2610290 AAAGTGGTGGGAAAAAAGCTTTTCTTGCGAAATGAAAGCATTAATATGATGTATCCTAAAGAGAA
259 AAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAA
* * * * * *
2610355 GACGATGTTTATGGTTCCTTATCCTGAAAAGATTGGGGGTTTGTATGAGTATCCATGTTTGTCTT
324 GACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
*
2610420 ATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGTGACATCAA
389 ATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAA
* *
2610485 AGCATCAGTTTCATGTCTCCTAA
454 AGCATCAATTTCATGTATCCTAA
* * * * * * * *
2610508 TGAGGGGAATTTG-TTTGTC-TCCCAATCTCA-AAAAGAAAGGAGATTGTTACAAGAATTGTTGC
1 TGAAGGGAATGTGTTTTGGCTTCACAATCT-AGAAAAGAATGGAGATTGTTACGAGAATCGATGC
* *
2610570 TTGTCTTATTTAAGGGATGAACTTTGATTTGAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCA
65 TTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCA
* * * * *
2610635 AAAGAAAATCATCAATTTCATTTATCCTAATGAGGGGAATGTATTTAT-GCTGCTTAATCACAAT
130 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAG-TGCCTAATCACAAA
* * *
2610699 ATCAATGAAGATCATTACTAGAATCCAAGTTTGCCTCTTTTGAGGCACGAACTTA-ACTTTACAA
194 ATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAA
* * * *
2610763 AAAATTGTGGGAAAAAAGCTTTTCTTGTGAAATGAAAGCATCAATATGATGTATCCTAAAGAGAA
259 AAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAA
* * * * * *
2610828 GACTATGTTTATGGTTCGTTATCCTAAAAAGATTGGGGGTTAGTATGAGTATCCATGTTTGTCTT
324 GACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
** *
2610893 ATTTAAGAGACAAACTTTGATTCTATCAAAAACAGTGGGAGGAAAAGTTTTTCTTGCGACATCAA
389 ATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAA
* *
2610958 AACATCAATTTCATGTCTCCTAA
454 AGCATCAATTTCATGTATCCTAA
* * * * *
2610981 TGAAGGGAATGTG-TTTGTC-TCCCAATCTCA-AAAAGAAAGGAGATTGTTACGAGAATTGTTGC
1 TGAAGGGAATGTGTTTTGGCTTCACAATCT-AGAAAAGAATGGAGATTGTTACGAGAATCGATGC
* **
2611043 TTGTCTTATTTAAGGGATCAACTTTGATTTTTAGGAAAATAGGGCAAAGAAAAGATTTCCATGCA
65 TTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCA
* * *
2611108 AAAGAAAATCATCAATTTCATTTATCCTAATGAGGGGAATGTGTTTATATTGCCTAATCACAAAA
130 AAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAA
* * *
2611173 TGAATAAAGATCATTACTAGAATCCTAGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAA
195 TGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAA
* *
2611238 AAATGGTGGGAAGAAAGCTTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
260 AAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* * * * *
2611303 ACTATGTTTATGATGCGTTATCCTAAAAAAAATGGGGATTAGTATGAGTATTCATGTTTTTCTTA
325 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * * *
2611368 TTTAAGAGACAAACTTTGATTCTATCAGAAACGGAGGAAGGAAAAGTTTTTCCTGCGACTTCAAA
390 TTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAA
* *
2611433 GCATC-ATTATCCTGTATCTTAA
455 GCATCAATT-TCATGTATCCTAA
* * * *** * *
2611455 TGAAGGGAAGGTGTTTTGGCTTCACAATCTTGAAAAGAATTGAGGCAGTTACGAGAATTGATTCT
1 TGAAGGGAATGTGTTTTGGCTTCACAATCTAGAAAAGAATGGAGATTGTTACGAGAATCGATGCT
* * * * **
2611520 TATCTTATTTAAGGTATGAACATTGACTTAAAGG-AAATAGGGCAAAGAAAAGATCCCCATGCAA
66 TGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAA
* *
2611584 AAGAAAATCATCAATATCATTTATCCTAAT-ATGGCGAATGTATTTATAGTGCCTAATCACAAAA
131 AAGAAAATCATCAATATCATTTATCCTAATGA-GGAGAATGTGTTTATAGTGCCTAATCACAAAA
* * *
2611648 TGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTGGAGGCACGAACTTAGACTTTACAAA
195 TGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAA
* * ** * *
2611713 AAATGGTAGGAAAAAAGCCTTTGTTGCGAATTGAAAGCATCAATATGATGTATCATGAAGAGAAG
260 AAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* ** * * ***
2611778 ATTATGTTTATGGTGCCCAATCCGGAAAA-AATGGGGATTGGTGCAAGTATTCATGTTTGTCTTA
325 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * * *
2611842 TTTAAGGGACAAACTTTGAATCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTACAAC-TCCAA
390 TTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACAT-CAA
* * *
2611906 AGCGTTAATTTCAAGTATCCTAA
454 AGCATCAATTTCATGTATCCTAA
* ** * * * * * *
2611929 TGAAGGGAATATGTTTTGGCTT-TGAATCTCGTAAAGAATGGCGATTGTTATGAGAGTCAATGCT
1 TGAAGGGAATGTGTTTTGGCTTCACAATCTAGAAAAGAATGGAGATTGTTACGAGAATCGATGCT
*
2611993 TGTGTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAA
66 TGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAA
* * *
2612058 AAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTGTA--GCCTAACCACATAAT
131 AAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * *
2612121 GAAAGAAGGTCGTTACTAGAATCCATGTTTGTCTCTTTTGAAGCA
196 GAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCA
2612166 TAAACTTTAC
Statistics
Matches: 5913, Mismatches: 833, Indels: 235
0.85 0.12 0.03
Matches are distributed among these distances:
461 97 0.02
462 195 0.03
463 83 0.01
465 2 0.00
466 1 0.00
467 2 0.00
468 7 0.00
469 248 0.04
470 101 0.02
471 244 0.04
472 233 0.04
473 911 0.15
474 1468 0.25
475 1322 0.22
476 455 0.08
477 411 0.07
478 65 0.01
479 7 0.00
480 61 0.01
ACGTcount: A:0.36, C:0.13, G:0.19, T:0.31
Consensus pattern (476 bp):
TGAAGGGAATGTGTTTTGGCTTCACAATCTAGAAAAGAATGGAGATTGTTACGAGAATCGATGCT
TGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAA
AAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
GAATGAAGATCATTACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAA
AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
TTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAG
CATCAATTTCATGTATCCTAA
Found at i:2608448 original size:158 final size:156
Alignment explanation
Indices: 2607795--2611313 Score: 918
Period size: 158 Copynumber: 22.2 Consensus size: 156
2607785 CAAAAGAAAT
* * ** *
2607795 CATCAATATCATTTATCCTAATGAGGGGAATACGTTTATAGTGCCTAATCGCA-AAATGAATGAA
1 CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-CATAAA-GAATGGA
* * * * *
2607859 GATTATTACTAGAATCCAAGTTTGTCTCATTTGAAGCACGAACTTAGACTTTACCAAAAATGGTG
64 GATTATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACAAACTTTGA-TTTACAAAAAATGGTG
* * * *
2607924 GGAAAAAAAGCCTTTCCTGCAAAACGAAGG
128 GG-AAAAAAGCTTTTCTTGCAAAACAAAAG
* * * ** * * * *
2607954 CATCAATATGATGTATCCTAAAG-GGAAAACAATGTTTATGGTGCATAATCCAGAAAAGAATGGG
1 CATCAATATCATGTATCCTAATGAGGAGAA-TGTGTTTATAGTGCCTAATCCA-TAAAGAATGGA
* * * *
2608018 GATTAGTA-TAAGTATTCATGTTTGTCTTATTTATG-AG-ACAAACTTTGATTCTATCAAAAAA-
64 GATTATTACT-AGAATCCATGTTTGTC-TCTTT-TGAAGCACAAACTTTGATT-TA-CAAAAAAT
* ** **
2608079 GGT-GGAAGGAAAAGTTTTTCTTGCAACCCCGAAG
124 GGTGGGAA--AAAAGCTTTTCTTGCAAAACAAAAG
* * * * *
2608113 CATCAATTTCATGTATCCTAATGAAAGG-GAATGTGTTT-TGGCT-CCGATTCTCGTAAAGAATG
1 CATCAATATCATGTATCCTAATG--AGGAGAATGTGTTTATAG-TGCCTAATC-CATAAAGAATG
* ** * * * *
2608175 GAGATTGTTAGGAGAATCGATGCTTGTCCTATTTATG-AG-ATAAACTTTGATTTA-AAGGAAAA
62 GAGATTATTACTAGAATCCATGTTTGT-CTCTTT-TGAAGCACAAACTTTGATTTACAA--AAAA
** * *
2608237 TAGG-GCAAAGAAAAG-TTTTCTATGCAAAAAAAAAT
123 T-GGTGGGAA-AAAAGCTTTTCT-TGCAAAACAAAAG
* * * * *
2608272 CATTAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA-CCATAACATAAAAGAA
1 CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCCATAA-A-GAATGGA
* ** *
2608336 GATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGGACTTAGACTTTACAAAAAATGGTG
64 GATTATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACAAACTTTGA-TTTACAAAAAATGGTG
* *
2608401 GGAAAAAAGCTTTTCTTGCAAAACCAAGG
128 GGAAAAAAGCTTTTCTTGCAAAACAAAAG
* * * * ** * *
2608430 CATCAATATGATGTATCCTAATGAGAAGACA-ATGTTTATGGTGGATAATCCAGAAAAGAATGGG
1 CATCAATATCATGTATCCTAATGAGGAGA-ATGTGTTTATAGTGCCTAATCCA-TAAAGAATGGA
* * * * *
2608494 GATTAGTT--TGAGTATTCATGTTTGTCT-TATCT-AAGAGACAAACTTTGATTCTATAAAAAA-
64 GATTA-TTACT-AGAATCCATGTTTGTCTCT-TTTGAAG-CACAAACTTTGATT-TACAAAAAAT
* * *
2608554 CGT-GGAAGGAAAAG-TGTTTCTTGC-GACCACAAAG
124 GGTGGGAA--AAAAGCT-TTTCTTGCAAAACA-AAAG
* * * * * *
2608588 CATCAATTTGATGTATCCTAATGAAGG-GAATGTGTTTGT-CT-CCCAATCTCATAAAGAAAGGA
1 CATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATC-CATAAAGAATGGA
* * ** *** * * * * * *
2608650 GATTGTTACGATTATTGTTGCTTGTCT-TACTT-AAGGGATAAACTTTGATTTTAAGGAAAAAAG
64 GATTATTACTAGAATCCATGTTTGTCTCT-TTTGAA-GCACAAACTTTGA-TTT-A-CAAAAAAT
**** * * * *
2608713 GGCAAAAAAAAAAAAGATTTTCATGCAAAAGAAAAT
124 GG---TGGGAAAAAAGCTTTTCTTGCAAAACAAAAG
* * * * *
2608749 CATCAATTTCATTTATCCTAATG-GGAAAAATGTGTTTATAGTGCCTAA-CCATAACATGAAAGA
1 CATCAATATCATGTATCCTAATGAGG-AGAATGTGTTTATAGTGCCTAATCCATAA-A-GAATGG
* * *
2608812 AGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACAAACTTAGACTTTACAAAAAATGGG
63 AGATTATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACAAACTTTGA-TTTACAAAAAATGGT
*
2608877 GGGAAAAAAGCTTTTCTTGCAAAACAAAGG
127 GGGAAAAAAGCTTTTCTTGCAAAACAAAAG
* * * * * * * *
2608907 CATCAATATGATGTATCCTAATGAGAAGACA-ATGTTTGTGGTGCATAATCCAGAAAAGAATGGG
1 CATCAATATCATGTATCCTAATGAGGAGA-ATGTGTTTATAGTGCCTAATCCA-TAAAGAATGGA
* * * * ** **
2608971 GATTAGT-GTGAGTATTCATGTTTGTCT-TATTT-ATAAAACAAACTTTGATTCTATGAAAAATG
64 GATTATTACT-AGAATCCATGTTTGTCTCT-TTTGA-AGCACAAACTTTGATT-TACAAAAAATG
* * * *
2609033 GT-GGAAGGAAAAGTTTTTCTTGTGACATC-AAAG
125 GTGGGAA--AAAAGCTTTTCTTG-CAAAACAAAAG
* * * * * *
2609066 CATCAATGTCATGTATCCTAATGAAGG-GATTGTGATT-TGGCTTCAC-AAT-CTTGAAAAGAAT
1 CATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAG-TGC-CTAATCCAT--AAAGAAT
* * * * * * ** * * *
2609127 AGAGA-TAGTTACGAGAATCTAT-TCTTATCT-TATTT-ATGGTATGAACATCGTTTTA-AAGGA
61 GGAGATTA-TTACTAGAATCCATGT-TTGTCTCT-TTTGA-AGCACAAACTTTGATTTACAA--A
* ** * * * * *
2609187 AAAT-ATGCAAAGAAAAG-ATTCCAATGCAAAAGAAAAT
120 AAATGGTGGGAA-AAAAGCTTTTC-TTGCAAAACAAAAG
* * * * * *
2609224 CATCAATATCATTTCTCCTAATAAGGAGAATATGTTTATAGTGCCTAATCGAAAAATGAA-GGAA
1 CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCCATAAA-GAATGG-A
* * * * *
2609288 GATCATTACTAGAATCCATGTTTGTCTTTTTTGAAGCACAGACTTAGACTTTACAAAAAATAGTG
64 GATTATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACAAACTTTGA-TTTACAAAAAATGGTG
* * *
2609353 AGAGAAAAGCCTTTCTTGCAAAACAAAAG
128 GGAAAAAAGCTTTTCTTGCAAAACAAAAG
* * * * * *
2609382 CATCAATA-CAACGTATCCTAA--AGGTAAAACTATGATTATGGTGCCTTATCC-TGAAAAGAAT
1 CATCAATATC-ATGTATCCTAATGAGG-AGAA-TGTGTTTATAGTGCCTAATCCAT--AAAGAAT
* * * * * * * *
2609443 GGGGATTAGTA-TGAGTATTCACGCTTGTCT-TATTT-AAGAGACAAACTTTGA-TT-CGATCAA
61 GGAGATTATTACT-AGAATCCATGTTTGTCTCT-TTTGAAG-CACAAACTTTGATTTAC-A-AAA
* * * * *
2609503 AATCGG-AGAAAGGAAAAGTTTTTCTTGCGACATC-AAAG
121 AAT-GGTGGGAA--AAAAGCTTTTCTTGC-AAAACAAAAG
* * *
2609541 CATCAATGTCATGTATCCTAATGAAGG-GAATGTGTTT-T-G-GCTTTGATTCTCATAAAGAATG
1 CATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTGC-CT-AATC-CATAAAGAATG
** * * * ****
2609602 GAGATTGCTA-TGAGAATCGATGCTTGTCGT-ATTT-AAGGGGTGAACTTTGATTTA-AAGGAAA
62 GAGATTATTACT-AGAATCCATGTTTGTC-TCTTTTGAA-GCACAAACTTTGATTTACAA--AAA
** * * * * * *
2609663 ATAGG-GCAAAGAAAAGATTTCCATGCAACAGAAAAT
122 AT-GGTGGGAA-AAAAGCTTTTCTTGCAAAACAAAAG
* * * * * *
2609699 CACCAATATCATTTATCCTAATGAGGAGAATGCGTTTATAATGCCTAA-CCAAAAAATGAATGAA
1 CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCC-ATAAA-GAATGGA
* * * * * ** * * *
2609763 GATCAATACTAGAATCCAAGTCTATCTCTTTT-AAGGCACGGAC--AGACTTCACAAAAAAAGGT
64 GATTATTACTAGAATCCATGTTTGTCTCTTTTGAA-GCACAAACTTTGA-TTTACAAAAAATGGT
* * *
2609825 GGGAAAAAAGCGTTTCTTGCGAAACGAAAG
127 GGGAAAAAAGCTTTTCTTGCAAAACAAAAG
* * * * * * ** * **
2609855 CTTCAATGTGACGTATCCTAAAGAGAAGAATACGTTTAT-GTGCCAAATTTGGA-AAAGAATGGA
1 CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA--TCCATAAAGAATGGA
* * * *
2609918 GATTAGTA-TGAGTATTCATGTTTGTCT-TATTT-AAG-AGGTAAACTTTGATTCTATC-AAAAA
64 GATTATTACT-AGAATCCATGTTTGTCTCT-TTTGAAGCA--CAAACTTTGATT-TA-CAAAAAA
* *
2609978 CGGT-GGAAGGAAAAG-TGTTTCTTGC-AACCACAAAG
123 TGGTGGGAA--AAAAGCT-TTTCTTGCAAAACA-AAAG
* * * * * *
2610013 CATCAATTTGATGCATCCTAATGAAGG-GAATGTGTTTGT-CT-CCCAATCTCATAAAGACA-GG
1 CATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATC-CATAAAGA-ATGG
* * *** ** * ** *
2610074 AGATTGTTACGAGAATTGTTGCATGTCT-TATTT-AAGGGATGAACTTTGATTTTA-AGGAAAAT
63 AGATTATTACTAGAATCCATGTTTGTCTCT-TTTGAA-GCACAAACTTTGA-TTTACA-AAAAAT
** * * * * *
2610136 AGG-GCAAAGAAAAGATTTCCATGCAAAAGAAAAT
124 -GGTGGGAA-AAAAGCTTTTCTTGCAAAACAAAAG
* * * * * *
2610170 CATCAATTTCATTTATCCTAATGAGGGGAATGTATTTATACTGCCTAATCACA-AAATGAATGAA
1 CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-CATAAA-GAATGGA
* * * * * *
2610234 GATCATTACTAGAATCCAAGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAGTGGTG
64 GATTATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACAAACTTTGA-TTTACAAAAAATGGTG
* **
2610299 GGAAAAAAGCTTTTCTTGCGAAATGAAAG
128 GGAAAAAAGCTTTTCTTGCAAAACAAAAG
* * * * * * * * *
2610328 CATTAATATGATGTATCCTAAAGAGAAG-ACGATGTTTATGGTTCCTTATCC-TGAAAAGATTGG
1 CATCAATATCATGTATCCTAATGAGGAGAATG-TGTTTATAGTGCCTAATCCAT--AAAGAATGG
* * * *
2610391 GGGTT-TGTA-TGAGTATCCATGTTTGTCT-TATTT-AAGAGACAAACTTTGATTCTATC-AAAA
63 AGATTAT-TACT-AGAATCCATGTTTGTCTCT-TTTGAAG-CACAAACTTTGATT-TA-CAAAAA
* * * *
2610451 ATGGT-GGAAGGAAAAGTTTTTCTTGTGACATC-AAAG
122 ATGGTGGGAA--AAAAGCTTTTCTTG-CAAAACAAAAG
* * * * * * * * * *
2610487 CATCAGTTTCATGTCTCCTAATGAGGGGAATTTGTTTGT-CT-CCCAATCTCAAAAAGAAAGGAG
1 CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-CATAAAGAATGGAG
* * *** * * ** *
2610550 ATTGTTACAAGAATTGTTGCTTGTCT-TATTT-AAGGGATGAACTTTGATTTGA-AGGAAAATAG
65 ATTATTACTAGAATCCATGTTTGTCTCT-TTTGAA-GCACAAACTTTGATTT-ACA-AAAAAT-G
** * * * *
2610612 G-GCAAAGAAAAGATTTTCATGCAAAAGAAAAT
125 GTGGGAA-AAAAGCTTTTCTTGCAAAACAAAAG
* * * * * ** *
2610644 CATCAATTTCATTTATCCTAATGAGGGGAATGTATTTAT-GCTGCTTAATCACA-ATATCAATGA
1 CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAG-TGCCTAATC-CATA-AAGAATGG
* * * * * * *
2610707 AGATCATTACTAGAATCCAAGTTTGCCTCTTTTGAGGCACGAAC-TTAACTTTACAAAAAATTGT
63 AGATTATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACAAACTTTGA-TTTACAAAAAATGGT
** **
2610771 GGGAAAAAAGCTTTTCTTGTGAAATGAAAG
127 GGGAAAAAAGCTTTTCTTGCAAAACAAAAG
* * * * * * * * * * * *
2610801 CATCAATATGATGTATCCTAAAGAGAAGACTATGTTTATGGTTCGTTATCCTAAAAAGATTGGGG
1 CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCC-ATAAAGAATGGAG
* * * *
2610866 GTTAGTA-TGAGTATCCATGTTTGTCT-TATTT-AAGAGACAAACTTTGATTCTATCAAAAACA-
65 ATTATTACT-AGAATCCATGTTTGTCTCT-TTTGAAG-CACAAACTTTGATT-TA-CAAAAA-AT
* * * *
2610927 -GTGGGAGGAAAAGTTTTTCTTGCGACATCAAAA-
124 GGTGGGA-AAAAAGCTTTTCTTGC-AAAACAAAAG
* * * * * * *
2610960 CATCAATTTCATGTCTCCTAATGAAGG-GAATGTGTTTGT-CT-CCCAATCTCAAAAAGAAAGGA
1 CATCAATATCATGTATCCTAATG-AGGAGAATGTGTTTATAGTGCCTAATC-CATAAAGAATGGA
* * *** * * ** *
2611022 GATTGTTACGAGAATTGTTGCTTGTCT-TATTT-AAGGGATC-AACTTTGATTTTTAGGAAAATA
64 GATTATTACTAGAATCCATGTTTGTCTCT-TTTGAA-GCA-CAAACTTTGATTTACA-AAAAAT-
** * * * * *
2611084 GG-GCAAAGAAAAGATTTCCATGCAAAAGAAAAT
124 GGTGGGAA-AAAAGCTTTTCTTGCAAAACAAAAG
* * * * **
2611117 CATCAATTTCATTTATCCTAATGAGGGGAATGTGTTTATATTGCCTAATCACA-AAATGAATAAA
1 CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-CATAAA-GAATGGA
* * * *
2611181 GATCATTACTAGAATCC-TAGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAAATGGT
64 GATTATTACTAGAATCCAT-GTTTGTCTCTTTTGAAGCACAAACTTTGA-TTTACAAAAAATGGT
* * *
2611245 GGGAAGAAAGCTTTTCTTGCGAAACGAAAG
127 GGGAAAAAAGCTTTTCTTGCAAAACAAAAG
* * * * *
2611275 CATCAATATGATGTATCCTAAAGAGAAGACTATGTTTAT
1 CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTAT
2611314 GATGCGTTAT
Statistics
Matches: 2426, Mismatches: 680, Indels: 509
0.67 0.19 0.14
Matches are distributed among these distances:
153 1 0.00
154 3 0.00
155 43 0.02
156 142 0.06
157 498 0.21
158 827 0.34
159 715 0.29
160 70 0.03
161 67 0.03
162 12 0.00
163 45 0.02
164 3 0.00
ACGTcount: A:0.36, C:0.13, G:0.19, T:0.31
Consensus pattern (156 bp):
CATCAATATCATGTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCCATAAAGAATGGAGA
TTATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACAAACTTTGATTTACAAAAAATGGTGGGA
AAAAAGCTTTTCTTGCAAAACAAAAG
Found at i:2610199 original size:157 final size:156
Alignment explanation
Indices: 2605741--2612154 Score: 906
Period size: 158 Copynumber: 40.6 Consensus size: 156
2605731 TTGCGGCCCC
* * * * * *
2605741 AAAGCATCAATTTCATGTATCCTAATGACGAGAATCTGTTTGTCTCCCAATCTCATAAAGAAAAG
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGTCTCCTAATCTCAAAAAG-AAGG
* ** * * * * * *
2605806 AGATTGTTACCAGAATTGATGCTTGTCTTATTTAAGGGATGAAATTTGATTTTAAGGAAAACATG
65 AGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAATAGG
* *
2605871 GCAAAGAAAAGATTTCCCTGCAAAAGA
130 GCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * * * ** *
2605898 AAATCCTCAATATCATTTATCCTAATAAGGGGAATGTGTTTATAGTGCCTAATCAGAAAATGAAT
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCTCAAAAAGAA-
** ** * ** * * * * *
2605963 AAAGATCATTACTAGAATCCAAATTTGTCTTATTTGAGGCACAAACTTAGACTTTACA-AAAAAT
63 GGAGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTA-AGAAAAAT
** ** * * **
2606027 -GGTGGGAA-AAAAGCCTTTCATACAAAACT
127 AGG-GCAAAGAAAAGATTTTCTTGCAAAAGA
* * ** * ** * * *
2606056 AAAGCATC-ATTATGATGCATTGTAAAGAGAAGACAATGT-TTATGAT-GCCTTATC-CTGAAAA
1 AAAGCATCAATT-TCATGTATCCTAATGAG--GGGAATGTGTT-TG-TCTCCTAATCTC-AAAAA
* * * ** * * * **
2606117 GAATGGGGATTAG-TATGAGTATTTATGTTTGTCTTATTTAAGAGAC-AGACTTTGAGTCTATCA
60 GAA-GGAGATT-GTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGA-ACTTTGATTTTAAGA
* * * * **
2606180 AAAAT-GGTGGAAGGAAAAGTTTTTCTTGCAACATC
122 AAAATAGG-GCAAAGAAAAGATTTTCTTGCAAAAGA
** * * **
2606215 AAAGCATCAATTTCATGTATCCTAGCGAAGGGAATGTGTTTTGGCTTCAC-AATCTTTAAAAGAA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTG-TTTGTC-TC-CTAATCTCAAAAAGAA
* ** * * * * * * * * *
2606279 CTGAGACAGTTACGAGAATCGAT-TCTTATCTTTTTTAAGGTATGCAC-ATCATTTTAAAGGAAA
63 -GGAGATTGTTACGAGAATCCATGT-TTGTCTTATTTAAGGGACGAACTTTGATTTT-AAGAAAA
* *
2606342 ATA-GGCAAAGAAAAGA-TTCCTAGGCAAAAGA
125 ATAGGGCAAAGAAAAGATTTTCT-TGCAAAAGA
* * * * * * * ** *
2606373 AAATCATCAATATCATTTATCCTAATGAGGAGAATATACTTATAGT-GCCTAATCGGAAAATGAA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGT-GTT-T-GTCTCCTAATCTCAAAAAGAA
* ** ** * * * * * * * * * *
2606437 TGAAGATCATTATTAGAATCCAAGTTTGTCTCAATTGAGGCACGAACCTAGACTTCAA-AAAATT
63 -GGAGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAA-A
* * **
2606501 TGGTGGGAAA-AAAAGCCTTTCTTGCAAAATG-
126 TAG-GGCAAAGAAAAGATTTTCTTGCAAAA-GA
* * * ** * **
2606532 AAAGCATCAA-TACGATGTATCTTAAAGAGAAGACTATGT-TTATGT-TGCCTTATCTTGAAAAG
1 AAAGCATCAATTTC-ATGTATCCTAATGAGGGGA--ATGTGTT-TGTCT-CCTAATCTCAAAAAG
* ** * * * * ***
2606594 AATAGG-GATTAG-TATGAGTGTTCATGTTTGTCATATTTAAGGGACAAACTTTGATTCTACCTA
61 -A-AGGAGATT-GTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAA
* * * ****
2606657 AAATAGTGG--AAGGAAAGTTTTTCTTGCGACCCC
123 AAATAG-GGCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * * * *
2606690 AAAGAATCAATTTCATATATTCTAATGAAGGAAATGTGTTTTGGCTCCCAATCTCATAAAGAAAG
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTG-TTTGTCTCCTAATCTCAAAAAG-AAG
* * ** * * * *
2606755 GAGATTGCTATGAGAATTAATGGTTGTCTTATTTAAAGGATGAACTTTGATTTTAAGGAAAATAG
64 GAGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAATAG
* * *
2606820 GCCAAAGAAAAGATTTCCATGCAAAAGA
129 GGCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * *
2606848 AAATCATCAATTTCTTTTATCCTAATGAGGGGAATGTGTTTATAGTGCCTAAT-TGCAAAATGCA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCT-CAAAAAG-A
* * ** * * * * * * *
2606912 TGAAGATCATTGCTAGAATCCAAGTTTGTCTCATTTGAA-GCACGAACTTAGACTTTACA-AAAA
62 AGGAGATTGTTACGAGAATCCATGTTTGTCTTATTT-AAGGGACGAACTTTGATTTTA-AGAAAA
* ** **
2606975 AT-GGTG-AAAAAAAAGCCTTTCTTATAAAACG-
125 ATAGG-GCAAAGAAAAGATTTTCTTGCAAAA-GA
* * ** * * ** * * * *
2607006 AAAGCATCAATATGATGTATCCTAAACAGAGGACTACGTTTATGGTGCCTTATC-CTGAAAAGAA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCTC-AAAAAGAA
* * * * * * * **
2607070 TGGGGGTTAG-TATGAGTATCCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCT-A-TCAAA
63 -GGAGATT-GTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAA
* * * ** * **
2607132 -A-GG-AAGGAAATGTTTTTCTTGTGACATC
126 TAGGGCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * * * * **
2607160 AAAGCATCAATTTCATGTCTCTTAATAAAGGGAATTTATTTTGGCTTGAC-AATCTTGAAAAGAA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGT-GTTTGTC-T-CCTAATCTCAAAAAGAA
* * * * ** * ** * *
2607224 CTGAGACTGTTACGAGAATCGATGCTTACCTTTTTTAAGGGA-TTACTTTGATTTAAAGGAAAAT
63 -GGAGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAAT
* * * * * *
2607288 ACGACAAAAAAAAGATTTCCATCCAAAA-A
127 AGGGCAAAGAAAAGATTTTCTTGCAAAAGA
* ** * * * * * * *
2607317 AAATCATCAACATCTTTTATCCTAATGAGGAGAATGCGTTTATAGTGCCTAATCACAAAATA-AA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCTCAAAA-AGAA
* ** * * * * * * * * * * *
2607381 TGAAGATCATTACTAGGATCCACGTTTGTCTCATTTGAGGCATGAACCTAGACTTTAA-AAAATT
63 -GGAGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAAT
* ** *
2607445 TGGTGGGAA-AAAAG-TCTTTCTTGCCAAATG-
127 AGG-GCAAAGAAAAGAT-TTTCTTG-CAAAAGA
* * *** * * *
2607475 AAAGCATCAA-TACGATGTATCCTAAAGAGAACACTATGT-TTATGT-TGCCTTATC-CTGAAAC
1 AAAGCATCAATTTC-ATGTATCCTAATGAGGGGA--ATGTGTT-TGTCT-CCTAATCTC-AAAAA
* * * *
2607536 GAATGG-G--GGTTA-GTATGAATACTCATGTTTGTCATATTTAAGAGAC-AGACTTTGATTCTA
60 GAA-GGAGATTGTTACG-A-GAAT-C-CATGTTTGTCTTATTTAAGGGACGA-ACTTTGATTTTA
* * * * ****
2607596 TA-AAAAAT-GGTGGAAGGAAAAGTTTTTCTTGCGACCCC
119 -AGAAAAATAGG-GCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * *
2607634 AAAG-AGTCAATTTCTTGTATCCTATTGAAGGGAATGTGTTTTGGCTTCATAATCT-AGAAAAGA
1 AAAGCA-TCAATTTCATGTATCCTAATGAGGGGAATGTG-TTTGTC-TCCTAATCTCA-AAAAGA
* * * * ** * * * ** * *
2607697 ATTGAGATAGTTACGAAAATCGATACTTGTCTTATTTAAGGTATGAACATCAATTTAAAGGAAAA
62 A-GGAGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAA
* *
2607762 TA-GGCAAAGAAAAGA-TTCCAATGCAAAAG-
126 TAGGGCAAAGAAAAGATTTTC-TTGCAAAAGA
* * * ** * * * *
2607791 AAATCATCAATATCATTTATCCTAATGAGGGGAATACGTTTATAGTGCCTAATCGCAAAATGAAT
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCTCAAAAAGAA-
* * * * * * * * **
2607856 GAAGATTATTACTAGAATCCAAGTTTGTCTCATTTGAA-GCACGAACTTAGACTTTACCAAAAAT
63 GGAGATTGTTACGAGAATCCATGTTTGTCTTATTT-AAGGGACGAACTTTGATTTTAAGAAAAAT
* * ** *
2607920 GGTGGGAAA-AAAAGCCTTTCCTGCAAAACG-
127 AG-GGCAAAGAAAAGATTTTCTTGCAAAA-GA
* * * * ** * * *
2607950 AAGGCATCAATATGATGTATCCTAA--AGGGAAAACAATGTTTATGGTGCATAATC-CAGAAAAG
1 AAAGCATCAATTTCATGTATCCTAATGAGGG-GAA-TGTGTTTGT-CT-CCTAATCTCA-AAAAG
* * * * * * * **
2608012 AATGGGGATTAGTATA--AGTATTCATGTTTGTCTTATTTATGAGACAAACTTTGATTCTATCAA
61 AA-GGAGATT-GT-TACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAA
* * * ****
2608075 AAA-AGGTGGAAGGAAAAGTTTTTCTTGCAACCCC
123 AAATAGG-GCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * **
2608109 GAAGCATCAATTTCATGTATCCTAATGAAAGGGAATGTGTTTTGGCTCCGATTCTCGTAAAGAAT
1 AAAGCATCAATTTCATGTATCCTAATG-AGGGGAATGTG-TTTGTCTCCTAATCTCAAAAAGAA-
* * * * * * ** * *
2608174 GGAGATTGTTAGGAGAATCGATGCTTGTCCTATTTATGAGATAAACTTTGATTTAAAGGAAAATA
63 GGAGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAATA
*
2608239 GGGCAAAGAAAAG-TTTTCTATGCAAAAAA
128 GGGCAAAGAAAAGATTTTCT-TGCAAAAGA
* * * * * * * *
2608268 AAATCATTAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA-C-CATAACATAA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCTCA-AA-A-AG
* ** * * * * *
2608331 AAGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAA-GCACGGACTTAGACTTTACA-AA
61 AAGGAGATTGTTACGAGAATCCATGTTTGTCT-TATTT-AAGGGACGAACTTTGATTTTA-AGAA
** * **
2608393 AAAT-GGTGGGAA-AAAAGCTTTTCTTGCAAAACC
123 AAATAGG-GCAAAGAAAAGATTTTCTTGCAAAAGA
* * * ** ***
2608426 AAGGCATCAATATGATGTATCCTAATGAGAAGACAATGT-TTATGGT-GGATAATC-CAGAAAAG
1 AAAGCATCAATTTCATGTATCCTAATGAG--GGGAATGTGTT-T-GTCTCCTAATCTCA-AAAAG
* * * * * * * *
2608488 AATGGGGATTAGTT-TGAGTATTCATGTTTGTCTTATCTAAGAGACAAACTTTGATTCTATA-AA
61 AA-GGAGATT-GTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTA-AGAA
* * ** *
2608551 AAA-CGTGG-AAGGAAAAG-TGTTTCTTGCGACCA-C
123 AAATAG-GGCAAAGAAAAGAT-TTTCTTGC-AAAAGA
* * * *
2608584 AAAGCATCAATTTGATGTATCCTAATGAAGGGAATGTGTTTGTCTCCCAATCTCATAAAGAAAGG
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGTCTCCTAATCTCAAAAAG-AAGG
** *** * * **
2608649 AGATTGTTACGATTATTGTTGCTTGTCTTACTTAAGGGATAAACTTTGATTTTAAGGAAAAA-AG
65 AGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAA-GAAAAATAG
* *
2608713 GGCAAAAAAAAAAAAGATTTTCATGCAAAAGA
129 GGC----AAAGAAAAGATTTTCTTGCAAAAGA
* * ** * * *
2608745 AAATCATCAATTTCATTTATCCTAATG-GGAAAAATGTGTTTATAGTGCCTAA-C-CATAACATG
1 AAAGCATCAATTTCATGTATCCTAATGAGG-GGAATGTGTTTGT-CT-CCTAATCTCA-AA-AAG
* ** * * * * *
2608807 AAAGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAA-GCACAAACTTAGACTTTACA-A
61 -AAGGAGATTGTTACGAGAATCCATGTTTGTCT-TATTT-AAGGGACGAACTTTGATTTTA-AGA
* ** * *
2608869 AAAATGGGGGGAA-AAAAGCTTTTCTTGCAAAACA
122 AAAATAGGGCAAAGAAAAGATTTTCTTGCAAAAGA
* * * ** * * *
2608903 AAGGCATCAATATGATGTATCCTAATGAGAAGACA-ATGTTTGTGGTGCATAATC-CAGAAAAGA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGA-ATGTGTTTGT-CT-CCTAATCTCA-AAAAGA
* * * ** * * *
2608966 ATGGGGATTAGTGT--GAGTATTCATGTTTGTCTTATTTATA-AAACAAACTTTGATTCTATGAA
62 A-GGAGATT-GT-TACGAGAATCCATGTTTGTCTTATTTA-AGGGACGAACTTTGATTTTAAGAA
* * * ** * **
2609028 AAAT-GGTGGAAGGAAAAGTTTTTCTTGTGACATC
123 AAATAGG-GCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * **
2609062 AAAGCATCAATGTCATGTATCCTAATGAAGGGATTGTGATTTGGCTTCAC-AATCTTGAAAAGAA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTG-TTTGTC-TC-CTAATCTCAAAAAGAA
* * * * * * * * * *
2609126 TAGAGATAGTTACGAGAATCTAT-TCTTATCTTATTTATGGTATGAACATCG-TTTTAAAGGAAA
63 -GGAGATTGTTACGAGAATCCATGT-TTGTCTTATTTAAGGGACGAACTTTGATTTT-AAGAAAA
* * *
2609189 ATA-TGCAAAGAAAAGA-TTCCAATGCAAAAGA
125 ATAGGGCAAAGAAAAGATTTTC-TTGCAAAAGA
* * * * * * * * * *
2609220 AAATCATCAATATCATTTCTCCTAATAAGGAGAATATGTTTATAGTGCCTAATC-GAAAAATGAA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCTCAAAAA-GAA
** * * * * *
2609284 GGAAGATCATTACTAGAATCCATGTTTGTCTTTTTTGAA-GCAC-AGACTTAGACTTTACA-AAA
63 GG-AGATTGTTACGAGAATCCATGTTTGTCTTATTT-AAGGGACGA-ACTTTGATTTTA-AGAAA
* * ** *
2609346 AATAGTG-AGAGAAAAGCCTTTCTTGCAAAACA
124 AATAGGGCAAAGAAAAGATTTTCTTGCAAAAGA
* * ** * * * *
2609378 AAAGCATCAA-TACAACGTATCCTAA--AGGTAAAACTATGATTATGGT-GCCTTATC-CTGAAA
1 AAAGCATCAATTTC-ATGTATCCTAATGAGG-GGAA-TGTG-TT-T-GTCTCCTAATCTC-AAAA
* * * * * * * * ** **
2609438 AGAATGGGGATTAG-TATGAGTATTCACGCTTGTCTTATTTAAGAGACAAACTTTGA-TTCGATC
59 AGAA-GGAGATT-GTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGA
* * * * **
2609501 AAAATCGGAG-AAAGGAAAAGTTTTTCTTGCGACATC
122 AAAATAGG-GCAAA-GAAAAGATTTTCTTGCAAAAGA
* * * * * *
2609537 AAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTTTTGGCT-TTGATTCTCATAAAGAAT
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTG-TTTGTCTCCT-AATCTCAAAAAGAA-
* * * * * ** * *
2609601 GGAGATTGCTATGAGAATCGATGCTTGTCGTATTTAAGGGGTGAACTTTGATTTAAAGGAAAATA
63 GGAGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAATA
* * *
2609666 GGGCAAAGAAAAGATTTCCATGCAACAGA
128 GGGCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * * * *
2609695 AAATCACCAATATCATTTATCCTAATGAGGAGAATGCGTTTATAATGCCTAA-C-CAAAAAATGA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCTC-AAAAA-GA
* *** * * * * * * * * *
2609758 ATGAAGATCAATACTAGAATCCAAGTCTATCTCT-TTTAAGGCACGGAC--AGACTTCACA-AAA
62 A-GGAGATTGTTACGAGAATCCATGTTTGTCT-TATTTAAGGGACGAACTTTGATTTTA-AGAAA
** ** *
2609819 AA-AGGTGGGAA-AAAAGCGTTTCTTGCGAAACG-
124 AATAGG-GCAAAGAAAAGATTTTCTTGC-AAAAGA
* * * * * ** ** * * * * **
2609851 AAAGCTTCAATGTGACGTATCCTAAAGAGAAGAATACGTTTATGTGCCAAATTTGGAAAAGAATG
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGTCT-CCTAATCTCAAAAAGAA-G
* * * * **
2609916 GAGATTAG-TATGAGTATTCATGTTTGTCTTATTTAAGAGGTA--AACTTTGATTCTATCAAAAA
64 GAGATT-GTTACGAGAATCCATGTTTGTCTTATTTAAG-GG-ACGAACTTTGATTTTAAGAAAAA
* * * * *
2609978 -CGGTGGAAGGAAAAG-TGTTTCTTGCAACCA-C
126 TAGG-GCAAAGAAAAGAT-TTTCTTGCAA-AAGA
* * * * *
2610009 AAAGCATCAATTTGATGCATCCTAATGAAGGGAATGTGTTTGTCTCCCAATCTCATAAAGACAGG
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGTCTCCTAATCTCAAAAAGA-AGG
*** ** * *
2610074 AGATTGTTACGAGAATTGTTGCATGTCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAGG
65 AGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAATAGG
* *
2610139 GCAAAGAAAAGATTTCCATGCAAAAGA
130 GCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * *
2610166 AAATCATCAATTTCATTTATCCTAATGAGGGGAATGTATTTATACTGCCTAATCACAAAATGAAT
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCTCAAAAAGAA-
* ** * * * * * * *
2610231 GAAGATCATTACTAGAATCCAAGTTTGTCTCT-TTTGAGGCACGAACTTAGACTTTACA-AAAAG
63 GGAGATTGTTACGAGAATCCATGTTTGTCT-TATTTAAGGGACGAACTTTGATTTTA-AGAAAAA
** * *
2610294 T-GGTGGGAA-AAAAGCTTTTCTTGCGAAATG-
126 TAGG-GCAAAGAAAAGATTTTCTTGC-AAAAGA
* * * * ** * *
2610324 AAAGCATTAATATGATGTATCCTAAAGAGAAGACGATGT-TTATGGT-TCCTTATC-CTGAAAAG
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGA--ATGTGTT-T-GTCTCCTAATCTC-AAAAAG
* * * * * * * * **
2610386 ATTGGGGGTT-TGTATGAGTATCCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
61 A-AGGAGATTGT-TACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAA
* * * ** * **
2610450 AAT-GGTGGAAGGAAAAGTTTTTCTTGTGACATC
124 AATAGG-GCAAAGAAAAGATTTTCTTGCAAAAGA
* * * *
2610483 AAAGCATCAGTTTCATGTCTCCTAATGAGGGGAATTTGTTTGTCTCCCAATCTCAAAAAGAAAGG
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGTCTCCTAATCTCAAAAAG-AAGG
* *** * * * *
2610548 AGATTGTTACAAGAATTGTTGCTTGTCTTATTTAAGGGATGAACTTTGATTTGAAGGAAAATAGG
65 AGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAATAGG
*
2610613 GCAAAGAAAAGATTTTCATGCAAAAGA
130 GCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * * * **
2610640 AAATCATCAATTTCATTTATCCTAATGAGGGGAATGTATTTATGCTGCTTAATCACAATATCAAT
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCTCAAAAAGAA-
* ** * * * * * * *
2610705 GAAGATCATTACTAGAATCCAAGTTTGCCTCT-TTTGAGGCACGAAC-TTAACTTTACA-AAAAA
63 GGAGATTGTTACGAGAATCCATGTTTGTCT-TATTTAAGGGACGAACTTTGATTTTA-AGAAAAA
* * * * *
2610767 TTGTGG-GAA-AAAAGCTTTTCTTGTGAAATG-
126 TAG-GGCAAAGAAAAGATTTTCTTG-CAAAAGA
* * * ** * *
2610797 AAAGCATCAATATGATGTATCCTAAAGAGAAGACTATGT-TTATGGT-TCGTTATC-CTAAAAAG
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGA--ATGTGTT-T-GTCTCCTAATCTC-AAAAAG
* * * * * * * * **
2610859 ATTGGGGGTTAG-TATGAGTATCCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAA
61 A-AGGAGATT-GTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAA
* * * * * **
2610923 AACAGTGG-GAGGAAAAGTTTTTCTTGCGACATCA
124 AATAG-GGCAAAGAAAAGATTTTCTTGC-AAAAGA
* * *
2610957 AAA-CATCAATTTCATGTCTCCTAATGAAGGGAATGTGTTTGTCTCCCAATCTCAAAAAGAAAGG
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGTCTCCTAATCTCAAAAAG-AAGG
*** * * *
2611021 AGATTGTTACGAGAATTGTTGCTTGTCTTATTTAAGGGATC-AACTTTGATTTTTAGGAAAATAG
65 AGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGA-CGAACTTTGATTTTAAGAAAAATAG
* *
2611085 GGCAAAGAAAAGATTTCCATGCAAAAGA
129 GGCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * *
2611113 AAATCATCAATTTCATTTATCCTAATGAGGGGAATGTGTTTATATTGCCTAATCACAAAATGAAT
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCTCAAAAAGAA-
** ** * * * * *
2611178 AAAGATCATTACTAGAATCC-TAGTTTGTCTCT-TTTGAGGCACGAACTTAGACTTTACA-AAAA
63 GGAGATTGTTACGAGAATCCAT-GTTTGTCT-TATTTAAGGGACGAACTTTGATTTTA-AGAAAA
** * *
2611240 AT-GGTGGGAAG-AAAGCTTTTCTTGCGAAACG-
125 ATAGG-GCAAAGAAAAGATTTTCTTGC-AAAAGA
* * * ** * * * * * * *
2611271 AAAGCATCAATATGATGTATCCTAAAGAGAAGACTATGTTTATGATGCGTTATC-CTAAAAAAAA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGT-CT-CCTAATCTC-AAAAAGAA
* * * * * * * *
2611335 TGGGGATTAG-TATGAGTATTCATGTTTTTCTTATTTAAGAGACAAACTTTGATTCTATCAGAAA
63 -GGAGATT-GTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATT-T-TAAGAAA
*** * * * * ****
2611399 CGGA-GG-AAGGAAAAGTTTTTCCTGCGACTTC
124 AATAGGGCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * **
2611430 AAAGCATC-ATTATCCTGTATCTTAATGAAGGGAAGGTGTTTTGGCTTCAC-AATCTTGAAAAGA
1 AAAGCATCAATT-TCATGTATCCTAATGAGGGGAATGTG-TTTGTC-TC-CTAATCTCAAAAAGA
* *** ** * * * * * * *
2611493 ATTGAGGCAGTTACGAGAATTGAT-TCTTATCTTATTTAAGGTATGAACATTGACTTAAAG-GAA
62 A-GGAGATTGTTACGAGAATCCATGT-TTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAA
*** *
2611556 ATAGGGCAAAGAAAAGATCCCCATGCAAAAGA
125 ATAGGGCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * * * * *
2611588 AAATCATCAATATCATTTATCCTAAT-ATGGCGAATGTATTTATAGTGCCTAATCACAAAATGAA
1 AAAGCATCAATTTCATGTATCCTAATGA-GGGGAATGTGTTTGT-CT-CCTAATCTCAAAAAGAA
* ** * ** * * *
2611652 TGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTGGAGGCACGAACTTAGACTTTACA-AAAA
63 -GGAGATTGTTACGAGAATCCATGTTTGTCT-TATTTAAGGGACGAACTTTGATTTTA-AGAAAA
* ** * **
2611715 AT-GGTAG-GAA-AAAAGCCTTTGTTGCGAATTG-
125 ATAGG--GCAAAGAAAAGATTTTCTTGC-AAAAGA
* * * ** * * * * *
2611746 AAAGCATCAATATGATGTATCATGAA-GAGAAGATTATGTTTATGGTGCCCAATC-CGGAAAAA-
1 AAAGCATCAATTTCATGTATCCT-AATGAGGGGAATGTGTTTGT-CT-CCTAATCTC--AAAAAG
* * * * * * * * * * **
2611808 ATGGGGATTGGTGCAAGTATTCATGTTTGTCTTATTTAAGGGACAAACTTTGAATCTATCAAAAA
61 AAGGAGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAA
* * * * * ****
2611873 -CGGTGGAAGGAAAAGTTTTTCTTACAACTCC
126 TAGG-GCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * * * * **
2611904 AAAGCGTTAATTTCAAGTATCCTAATGAAGGGAATATGTTTTGGCT-TTGAATCTCGTAAAGAAT
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTG-TTTGTCTCCT-AATCTCAAAAAGAA-
* * * * * * * * *
2611968 GGCGATTGTTATGAGAGTCAATGCTTGTGTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA
63 GGAGATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAATA
* *
2612033 GGGCAAAGAAAAGATTTCCATGCAAAAGA
128 GGGCAAAGAAAAGATTTTCTTGCAAAAGA
* * * * ** * * * * *
2612062 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTGTAGCCTAACCACATAATGAAAGA
1 AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGTCTCCTAATCTCAAAAAG-AAGG
* * *
2612127 AGGTCGTTACTAGAATCCATGTTTGTCT
65 AGATTGTTACGAGAATCCATGTTTGTCT
2612155 CTTTTGAAGC
Statistics
Matches: 4314, Mismatches: 1552, Indels: 782
0.65 0.23 0.12
Matches are distributed among these distances:
153 10 0.00
154 82 0.02
155 58 0.01
156 168 0.04
157 912 0.21
158 1611 0.37
159 1229 0.28
160 104 0.02
161 70 0.02
162 17 0.00
163 49 0.01
164 4 0.00
ACGTcount: A:0.36, C:0.14, G:0.19, T:0.31
Consensus pattern (156 bp):
AAAGCATCAATTTCATGTATCCTAATGAGGGGAATGTGTTTGTCTCCTAATCTCAAAAAGAAGGA
GATTGTTACGAGAATCCATGTTTGTCTTATTTAAGGGACGAACTTTGATTTTAAGAAAAATAGGG
CAAAGAAAAGATTTTCTTGCAAAAGA
Found at i:2612281 original size:116 final size:114
Alignment explanation
Indices: 2612062--2612281 Score: 275
Period size: 116 Copynumber: 1.9 Consensus size: 114
2612052 ATGCAAAAGA
* ** *
2612062 AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTGTAGCCTAACCACATAATGAAAGA
1 AAATCATCAATATCATTTATCCTAATAAGGAGAATACGTTTGTAGCCTAACCACAAAATGAAAGA
* * * *
2612127 AGGTCGTTACTAGAATCCATGTTTGTCTCTTTTGAAGCATAAACTTTAC
66 AGATCATTACTAGAATCCAAGTTTATCTCTTTTGAAGCATAAACTTTAC
* *
2612176 AAATCATCAATATCATTTATTCTAATAAGGAGAATACGTTAATAGT-GCCTAATCACAAAATGAA
1 AAATCATCAATATCATTTATCCTAATAAGGAGAATACGTT--T-GTAGCCTAACCACAAAATGAA
*
2612240 TA-AAGATCATTACTGGAATCCAAGTTTATCT-TATTTGAAGCA
63 -AGAAGATCATTACTAGAATCCAAGTTTATCTCT-TTTGAAGCA
2612282 CGAACTTAGA
Statistics
Matches: 90, Mismatches: 11, Indels: 8
0.83 0.10 0.07
Matches are distributed among these distances:
114 36 0.40
115 1 0.01
116 50 0.56
117 3 0.03
ACGTcount: A:0.38, C:0.15, G:0.14, T:0.33
Consensus pattern (114 bp):
AAATCATCAATATCATTTATCCTAATAAGGAGAATACGTTTGTAGCCTAACCACAAAATGAAAGA
AGATCATTACTAGAATCCAAGTTTATCTCTTTTGAAGCATAAACTTTAC
Found at i:2616637 original size:12 final size:11
Alignment explanation
Indices: 2616620--2616690 Score: 65
Period size: 12 Copynumber: 6.3 Consensus size: 11
2616610 CTCTCTATTA
2616620 TCTCTCCTATC
1 TCTCTCCTATC
2616631 TCTTCTCCTATC
1 TC-TCTCCTATC
*
2616643 ATCCCTCCTA--
1 -TCTCTCCTATC
*
2616653 TCTCTACTATC
1 TCTCTCCTATC
2616664 TCTCCTCCTATC
1 TCT-CTCCTATC
*
2616676 ATCCCTCCTATC
1 -TCTCTCCTATC
2616688 TCT
1 TCT
2616691 TCTTTCTCTT
Statistics
Matches: 48, Mismatches: 6, Indels: 12
0.73 0.09 0.18
Matches are distributed among these distances:
9 7 0.15
11 7 0.15
12 30 0.62
13 4 0.08
ACGTcount: A:0.13, C:0.45, G:0.00, T:0.42
Consensus pattern (11 bp):
TCTCTCCTATC
Found at i:2616650 original size:24 final size:25
Alignment explanation
Indices: 2616609--2616693 Score: 73
Period size: 33 Copynumber: 3.1 Consensus size: 25
2616599 TCATCCCTCC
* *
2616609 TCTCTCTATTATCTCTCCTATCTCT
1 TCTCTCTATCATCCCTCCTATCTCT
2616634 TCTC-CTATCATCCCTCCTATCTCTACTAT
1 TCTCTCTATCATCCCTCCTA--TCT-C--T
2616663 CTCTCCTCCTATCATCCCTCCTATCTCT
1 -TCT-CT-CTATCATCCCTCCTATCTCT
2616691 TCT
1 TCT
2616694 TTCTCTTTGA
Statistics
Matches: 49, Mismatches: 2, Indels: 16
0.73 0.03 0.24
Matches are distributed among these distances:
24 13 0.27
25 4 0.08
26 3 0.06
27 4 0.08
28 1 0.02
29 1 0.02
30 4 0.08
31 4 0.08
33 15 0.31
ACGTcount: A:0.13, C:0.42, G:0.00, T:0.45
Consensus pattern (25 bp):
TCTCTCTATCATCCCTCCTATCTCT
Found at i:2616655 original size:33 final size:33
Alignment explanation
Indices: 2616618--2616700 Score: 130
Period size: 33 Copynumber: 2.5 Consensus size: 33
2616608 CTCTCTCTAT
*
2616618 TATCTCTCCTATCTCTTCTCCTATCATCCCTCC
1 TATCTCTACTATCTCTTCTCCTATCATCCCTCC
*
2616651 TATCTCTACTATCTCTCCTCCTATCATCCCTCC
1 TATCTCTACTATCTCTTCTCCTATCATCCCTCC
* *
2616684 TATCTCTTCTTTCTCTT
1 TATCTCTACTATCTCTT
2616701 TGAGGGCTAC
Statistics
Matches: 45, Mismatches: 5, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
33 45 1.00
ACGTcount: A:0.12, C:0.42, G:0.00, T:0.46
Consensus pattern (33 bp):
TATCTCTACTATCTCTTCTCCTATCATCCCTCC
Found at i:2616662 original size:21 final size:20
Alignment explanation
Indices: 2616599--2616675 Score: 61
Period size: 21 Copynumber: 3.7 Consensus size: 20
2616589 CCTCCTCCTG
2616599 TCATCCCTCC--TCTCTCTA
1 TCATCCCTCCTATCTCTCTA
* *
2616617 TTATCTCTCCTATCTCTTCTCCTA
1 TCATCCCTCCTA--TC-TCT-CTA
2616641 TCATCCCTCCTATCTCTACTA
1 TCATCCCTCCTATCTCT-CTA
2616662 TC-TCTCCTCCTATC
1 TCATC-CCTCCTATC
2616676 ATCCCTCCTA
Statistics
Matches: 47, Mismatches: 5, Indels: 11
0.75 0.08 0.17
Matches are distributed among these distances:
18 8 0.17
20 2 0.04
21 17 0.36
22 4 0.09
23 3 0.06
24 13 0.28
ACGTcount: A:0.13, C:0.44, G:0.00, T:0.43
Consensus pattern (20 bp):
TCATCCCTCCTATCTCTCTA
Found at i:2619718 original size:773 final size:775
Alignment explanation
Indices: 2618609--2620201 Score: 1932
Period size: 773 Copynumber: 2.0 Consensus size: 775
2618599 AGGAAATGTT
** ** *
2618609 TTTCTTGCGACCCCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTGTCTCCCAAT
1 TTTCTTGCGAAACCAAAGCATCAATTTCATGTATCCTAACCAACGGAATGTGTTTGTCTCCCAAT
* ** *
2618674 CTCATAAAGGAAGGAGATTGTTACGAGAATTGATGCTTGTCTTATTTAAAGGATGAACTTTGATT
66 CTCATAAAGGAAGGAGATAGTTACGAGAATCAATGCTTGTCTTATTTAAAGGATGAACTTTGATA
* * *
2618739 TTAAGGAAAATAAGGCAAATAAAAGATTTCCATGGAAAAGAAAATCAAAATATCATTTATCCTAA
131 TAAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCAAAATATCATTTATCCTAA
** ** *
2618804 TGAGGGGAATGTGTTTATAGTGCCAAATTACAAAATGAATGAAGATCATTACTAGAATCCAAATT
196 TGAGAAGAATGTGTTTATAGTGCCAAACCACAAAATGAAAGAAGATCATTACTAGAATCCAAATT
* * *
2618869 TGTCTTATTTGAGGCACAAACTTTGGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCATGCGA
261 TCTCTTATTTGAAGCACAAACTTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCATGCGA
* * * * *
2618934 AACGAAAGCATCATTATGATGTATCGTAAAGAGAAGACAATGTTTATGGCGCCTTATCCTAAAAA
326 AACGAAAGCATCAATATGATGTATCCTAAAGAAAAGACAATGTTTATGGCGCCTAATCCGAAAAA
* *
2618999 GAATAGGGATTAGTACGAGTATTTATGTTTGTCTCATTTAAGAGACAGACTTTGATTCTATCAAA
391 GAATAGGGATTAGTACGAGTATTCATGTTTGTCTCATTTAAGAGACAAACTTTGATTCTATCAAA
* ** * *
2619064 AATGGTGGAAGGAAATTTTTTTCTTGC-GACA-TCAAAGCATCAATTTCATGTATCCTAATGAAA
456 AATGATGGAAGGAAAAGTTTTTCCT-CTGACAGT-AAAGCATCAATTTCATGCATCCTAATGAAA
2619127 GGAAAGTGTTTTGGCTTCACAATCT-ATAAAAGAACT-GAAACAGTTACGAGAAT-TGATTG-TT
519 GGAAAGTGTTTTGGC-TCACAATCTCAT-AAAGAA-TGGAAACAGTTACGAGAATATGATTGCTT
** *
2619188 ATCTT-A-ATTAA-G-G-TAT-G-AATA-GGCAAAGAAAAGATTTCCAAGCAAAAGAAAAACATC
581 AT-TTAAGACGAACGTGATATAGAAATAGGGCAAAAAAAAGATTTCCAAGCAAAAGAAAAACATC
* * *
2619245 AATATCATTTGTCCTAATAAGGAGAATA-TGTTTATAGTGCCTAAACATAAAATGAATGAAGATG
645 AATATCATTTATCCTAATAAGGAGAA-AGTGTTTATAGTGCCTAAACACAAAATG-A--AAGATC
* *
2619309 ATTACTAGAATCCATGTTTGTCTCTTTTGAAGCATGAACTTAGACTTTACAAAAAATGTTGGG-A
706 ATTACTAGAATCCATGTTTG--TCTTTTGAAGCACGAACTTAGACTTTA-AAAAAATGGTGGGAA
2619373 AAAAAGCC
768 AAAAAGCC
**
2619381 TTTCTTGCGAAACCAAAGCATCAATTTCATGTATCCTAACCAACGGAATGTGTTT-TAGCTCTGA
1 TTTCTTGCGAAACCAAAGCATCAATTTCATGTATCCTAACCAACGGAATGTGTTTGT--CTCCCA
* ** *
2619445 TTCTTGTAAA-GAATGGAGATAGTTACGAGAATCAATGCTTGTCTTATTTAAGGGATGAACTTTG
64 ATCTCATAAAGGAA-GGAGATAGTTACGAGAATCAATGCTTGTCTTATTTAAAGGATGAACTTTG
* * * * *
2619509 ATATAAAGGAAAATAGGGCAAAGAAATGATTTCCGTGCAAAAGAAAATCATCAATATCATTTATT
128 ATATAAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCA-AAATATCATTTATC
*
2619574 CTAATGAGAAGAATGTGTTTATAGTGCCTAACCACAAAATGAAAGAAGATCACTT-CTAGAATCC
192 CTAATGAGAAGAATGTGTTTATAGTGCCAAACCACAAAATGAAAGAAGATCA-TTACTAGAATCC
*** * **
2619638 TTGTTTCTCTCT-TTTGAATCATGAAC-TTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTC
256 AAATTTCTCT-TATTTGAAGCACAAACTTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTC
* * ** * *
2619701 TTGCGAAACGAAAGCATCAATATGATGTATCCTAATGAAAAGACCTTGTTTATGGTGCCTAATTC
320 ATGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAAAAGACAATGTTTATGGCGCCTAATCC
* * * * ** *
2619766 GAAAAAGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATTTATTAGATAAACTTTGATTCT
385 GAAAAAGAATAGGGATTAGTACGAGTATTCATGTTTGTCTCATTTAAGAGACAAACTTTGATTCT
*
2619831 ATCTAAAATGATGGAAGGAAAAGTTTTTCCTCTGACAGTAAAGCATCAATTTCATGCATCCTAAT
450 ATCAAAAATGATGGAAGGAAAAGTTTTTCCTCTGACAGTAAAGCATCAATTTCATGCATCCTAAT
* * ** * ** * *
2619896 GAAGGGAATGTGTTTTGGCTCTGATTCTCATAAAGAATGGAAATTGTTATGAGAATCGATGCTTG
515 GAAAGGAAAGTGTTTTGGCTCACAATCTCATAAAGAATGGAAACAGTTACGAGAAT--ATGATTG
** *
2619961 TCTTATTTAAGGGACGAACGTTGATATAAAGGAAAATAGGGCAAAAAAAAGATTTCCTTGTAAAA
578 -CTTATTTAA--GACGAACG-TGATAT--A-G-AAATAGGGCAAAAAAAAGATTTCCAAGCAAAA
* * * * *
2620026 GAAAATCATCAATATCATTTATCCTATTGATGAGAAAGTGTTTATAGTGCCTAACCACAAAATGA
635 GAAAAACATCAATATCATTTATCCTAATAAGGAGAAAGTGTTTATAGTGCCTAAACACAAAATGA
* *
2620091 AAGATCATTACTAGAATCCATGTTTGTCTTTTGATGCACGAACTTAGACTTTATAAAAATGGTGG
700 AAGATCATTACTAGAATCCATGTTTGTCTTTTGAAGCACGAACTTAGACTTTAAAAAAATGGTGG
2620156 GAAAAAAAGCC
765 GAAAAAAAGCC
* * *
2620167 TTTCTTGCGAAACGAAAGCATCAATATGATGTATC
1 TTTCTTGCGAAACCAAAGCATCAATTTCATGTATC
2620202 GTAAAGAGAA
Statistics
Matches: 695, Mismatches: 94, Indels: 50
0.83 0.11 0.06
Matches are distributed among these distances:
771 2 0.00
772 80 0.12
773 320 0.46
774 84 0.12
775 8 0.01
776 2 0.00
777 5 0.01
780 3 0.00
781 1 0.00
783 1 0.00
784 3 0.00
785 11 0.02
786 66 0.09
788 26 0.04
790 6 0.01
791 77 0.11
ACGTcount: A:0.37, C:0.13, G:0.18, T:0.31
Consensus pattern (775 bp):
TTTCTTGCGAAACCAAAGCATCAATTTCATGTATCCTAACCAACGGAATGTGTTTGTCTCCCAAT
CTCATAAAGGAAGGAGATAGTTACGAGAATCAATGCTTGTCTTATTTAAAGGATGAACTTTGATA
TAAAGGAAAATAAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCAAAATATCATTTATCCTAA
TGAGAAGAATGTGTTTATAGTGCCAAACCACAAAATGAAAGAAGATCATTACTAGAATCCAAATT
TCTCTTATTTGAAGCACAAACTTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCATGCGA
AACGAAAGCATCAATATGATGTATCCTAAAGAAAAGACAATGTTTATGGCGCCTAATCCGAAAAA
GAATAGGGATTAGTACGAGTATTCATGTTTGTCTCATTTAAGAGACAAACTTTGATTCTATCAAA
AATGATGGAAGGAAAAGTTTTTCCTCTGACAGTAAAGCATCAATTTCATGCATCCTAATGAAAGG
AAAGTGTTTTGGCTCACAATCTCATAAAGAATGGAAACAGTTACGAGAATATGATTGCTTATTTA
AGACGAACGTGATATAGAAATAGGGCAAAAAAAAGATTTCCAAGCAAAAGAAAAACATCAATATC
ATTTATCCTAATAAGGAGAAAGTGTTTATAGTGCCTAAACACAAAATGAAAGATCATTACTAGAA
TCCATGTTTGTCTTTTGAAGCACGAACTTAGACTTTAAAAAAATGGTGGGAAAAAAAGCC
Found at i:2628240 original size:158 final size:158
Alignment explanation
Indices: 2627710--2628732 Score: 439
Period size: 158 Copynumber: 6.4 Consensus size: 158
2627700 CCTTATCCTA
* *
2627710 AAAAGAATGGGGATTGGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACATT-GATATTA
1 AAAAGAATGGGAATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAAC-TTAGAT-TTA
*** * * * *
2627774 TCAAAAACA--GTACAAGGAACAA-TCTTTCTTGC-AACCCCAAAGCATCAATTTCATGTATCCT
64 -CAAAAA-ATGGGGGAA-GAA-AAGCCTTTCTTGCGAA-ACAAAAGCATCAATATCATGTATCCT
* * * * * * * *
2627835 AATGA-AGGGATGTGTTT-TTGCT-CCGATTCTCG
124 AAAGAGAAGAATATGTTTATAGCTGCCTAATCTAG
* * * * * *
2627867 TAAAGAAT-GGAGATT-GTTATGAG-AATCAATGCTTGTCTTATTTAAGGGACGAACTTTGATTT
1 AAAAGAATGGGA-ATTAG-TATGAGTATTC-ATGTTTGTCTTATTTAAGAGACAAACTTAGATTT
** * * ** * * *
2627929 A-AAGGAAAATAGGGCAAAGAAAAG-ATTTCAATGTAAAAGAAAATCATCAATATCATTTATCCT
63 ACAA--AAAAT-GGGGGAAGAAAAGCCTTTC-TTGCGAAACAAAAGCATCAATATCATGTATCCT
* * * *
2627992 AATGAGGAGAAATGTGTTTATAG-TGCCTAATC-AC
124 AAAGAGAAG-AATATGTTTATAGCTGCCTAATCTAG
* * * * * * * *
2628026 AAAAAATATGAAGATAATTACTA-GA--ATCCATGTTTGTCTCATTTCAG-GCACGAACTTAAAC
1 AAAAGA-ATG--G-GAATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAG-ACAAACTTAGA-
* * *
2628087 TTTACAAAAAATGGTGGGAA-AAAAGCCTTTCTTGTGAAACAAAAGCATCAATATGATGTATCGT
60 TTTACAAAAAATGG-GGGAAGAAAAGCCTTTCTTGCGAAACAAAAGCATCAATATCATGTATCCT
* *
2628151 AAAGACAAGACTATGTTTAT-GCTGCCTAATCTAG
124 AAAGAGAAGAATATGTTTATAGCTGCCTAATCTAG
* *
2628185 AAAAGAATGGGAATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTAT
1 AAAAGAATGGGAATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTAGATT-TA-
* ** * * * *
2628250 C-AAAAACGGGGGAAGGAAAAGTTTTTCTTGTG-ACCTCAAAGCATCAATTTCATGTATCCTAAT
64 CAAAAAATGGGGGAA-GAAAAGCCTTTCTTGCGAAAC-AAAAGCATCAATATCATGTATCCTAA-
* * * ** * *
2628313 AAAG-AGAATGTGTTT-TGGCT-CAGATTCTTG
126 AGAGAAGAATATGTTTATAGCTGCCTAATCTAG
* * ** * * * *
2628343 CAAAGAATGGAAATT-GTTATGAG-AAACAATGCTTGTCTTATTTAAGGGATAAACTTTGATTTA
1 AAAAGAATGGGAATTAG-TATGAGTATTC-ATGTTTGTCTTATTTAAGAGACAAACTTAGATTTA
* ** ** * * * ** * *
2628406 AAGAAAAATAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATAATCAATATCATTTATCCTAAT
64 CA-AAAAAT-GGGGGAAGAAAAGCCTTTCTTGCGAAACAAAAGCATCAATATCATGTATCCTAAA
* * *
2628471 GAGGAGAATCTGTTTATAG-TGCCTAATC-AC
127 GAGAAGAATATGTTTATAGCTGCCTAATCTAG
* * * * * *
2628501 AAAATGAAT--GAAGTTCATTACT-AGAATCCAAGTTTGTCTTATTTGAG-GCACGAACTTAGAC
1 AAAA-GAATGGGAA-TT-AGTA-TGAGTATTCATGTTTGTCTTATTTAAGAG-ACAAACTTAGA-
* * *
2628562 TTTACAAAAAATGGTGGG-AGAAAAGCCTTTCTTACGAAACAAAAGCATCAATATGACGTATCCT
60 TTTACAAAAAATGG-GGGAAGAAAAGCCTTTCTTGCGAAACAAAAGCATCAATATCATGTATCCT
** * * **
2628626 ATTGAGAAGACA-ATGTTTAT-GGTGCTTAATCCGG
124 AAAGAGAAGA-ATATGTTTATAGCTGCCTAATCTAG
* *
2628660 AAAAGAATGGGGATTAGTATGAGTATATTCATGTTTGTCTTATTTAAAAGACAAACATT-GATTC
1 AAAAGAATGGGAATTAGTATGAG--TATTCATGTTTGTCTTATTTAAGAGACAAAC-TTAGATT-
2628724 TATCAAAAA
62 TA-CAAAAA
2628733 CGGTGGATGG
Statistics
Matches: 648, Mismatches: 148, Indels: 136
0.70 0.16 0.15
Matches are distributed among these distances:
154 2 0.00
155 8 0.01
156 23 0.04
157 91 0.14
158 246 0.38
159 168 0.26
160 84 0.13
161 15 0.02
162 4 0.01
163 6 0.01
164 1 0.00
ACGTcount: A:0.38, C:0.13, G:0.18, T:0.31
Consensus pattern (158 bp):
AAAAGAATGGGAATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTAGATTTACA
AAAAATGGGGGAAGAAAAGCCTTTCTTGCGAAACAAAAGCATCAATATCATGTATCCTAAAGAGA
AGAATATGTTTATAGCTGCCTAATCTAG
Found at i:2628603 original size:475 final size:476
Alignment explanation
Indices: 2627710--2628809 Score: 1636
Period size: 475 Copynumber: 2.3 Consensus size: 476
2627700 CCTTATCCTA
*
2627710 AAAAGAATGGGGATTGGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACATTGATAT-TA
1 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACATTGAT-TCTA
* ** * * *
2627774 TCAAAAACAGTACAAGGAACAA-TCTTTCTTGCAACCCCAAAGCATCAATTTCATGTATCCTAAT
65 TCAAAAACGGTGGAAGGAA-AAGTTTTTCTTGCGACCTCAAAGCATCAATTTCATGTATCCTAAT
* * * * * *
2627838 GAAG-GGATGTGTTTTTGCTCCGATTCTCGTAAAGAATGGAGATTGTTATGAGAATCAATGCTTG
129 GAAGAGAATGTGTTTTGGCTCAGATTCTCGCAAAGAATGGAAATTGTTATGAGAAACAATGCTTG
* * *
2627902 TCTTATTTAAGGGACGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCAATGTAAAA
194 TCTTATTTAAGGGACAAACTTTGATTTAAAGAAAAATAGGGCAAAGAAAAGATTTCAATGCAAAA
* *
2627967 GAAAATCATCAATATCATTTATCCTAATGAGGAGAAATGTGTTTATAGTGCCTAATCACAAAAAA
259 GAAAATAATCAATATCATTTATCCTAATGAGGAGAAATCTGTTTATAGTGCCTAATCACAAAAAA
*
2628032 TATGAAGATAATTACTAGAATCCATGTTTGTCTCATTTCAGGCACGAACTTAAACTTTACAAAAA
324 TATGAAGATAATTACTAGAATCCAAGTTTGTCTCATTTCAGGCACGAACTTAAACTTTACAAAAA
** * *
2628097 ATGGTGGGAAAAAAGCCTTTCTTGTGAAACAAAAGCATCAATATGATGTATCGTAAAGACAAGAC
389 ATGGTGGGAAAAAAGCCTTTCTTACGAAACAAAAGCATCAATATGACGTATCCTAAAGACAAGAC
* *
2628162 TATGTTTATGCTGCCTAATCTAG
454 AATGTTTATGCTGCCTAATCCAG
* * *
2628185 AAAAGAATGGGAATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTAT
1 AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACATTGATTCTAT
* * *
2628250 CAAAAACGGGGGAAGGAAAAGTTTTTCTTGTGACCTCAAAGCATCAATTTCATGTATCCTAATAA
66 CAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACCTCAAAGCATCAATTTCATGTATCCTAATGA
*
2628315 AGAGAATGTGTTTTGGCTCAGATTCTTGCAAAGAATGGAAATTGTTATGAGAAACAATGCTTGTC
131 AGAGAATGTGTTTTGGCTCAGATTCTCGCAAAGAATGGAAATTGTTATGAGAAACAATGCTTGTC
*
2628380 TTATTTAAGGGATAAACTTTGATTTAAAGAAAAATAGGGCAAAGAAAAGATTTTC-ATGCAAAAG
196 TTATTTAAGGGACAAACTTTGATTTAAAGAAAAATAGGGCAAAGAAAAGA-TTTCAATGCAAAAG
*
2628444 AAAATAATCAATATCATTTATCCTAATGAGGAG-AATCTGTTTATAGTGCCTAATCACAAAATGA
260 AAAATAATCAATATCATTTATCCTAATGAGGAGAAATCTGTTTATAGTGCCTAATCACAAAA-AA
* * * * *
2628508 -ATGAAGTTCATTACTAGAATCCAAGTTTGTCTTATTTGAGGCACGAACTTAGACTTTACAAAAA
324 TATGAAGATAATTACTAGAATCCAAGTTTGTCTCATTTCAGGCACGAACTTAAACTTTACAAAAA
* ** *
2628572 ATGGTGGGAGAAAAGCCTTTCTTACGAAACAAAAGCATCAATATGACGTATCCTATTGAGAAGAC
389 ATGGTGGGAAAAAAGCCTTTCTTACGAAACAAAAGCATCAATATGACGTATCCTAAAGACAAGAC
* * *
2628637 AATGTTTATGGTGCTTAATCCGG
454 AATGTTTATGCTGCCTAATCCAG
*
2628660 AAAAGAATGGGGATTAGTATGAGTATATTCATGTTTGTCTTATTTAAAAGACAAACATTGATTCT
1 AAAAGAATGGGGATTAGTATGAG--TATTCATGTTTGTCTTATTTAAGAGACAAACATTGATTCT
* * * * *
2628725 ATCAAAAACGGTGGATGGAAAAGTTTTTCCTGCGACATCAAAGCATCAATTTCATTTATCCTAAG
64 ATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACCTCAAAGCATCAATTTCATGTATCCTAAT
2628790 GAAGAGAATGTGTTTTGGCT
129 GAAGAGAATGTGTTTTGGCT
2628810 TCACAATCTT
Statistics
Matches: 560, Mismatches: 58, Indels: 12
0.89 0.09 0.02
Matches are distributed among these distances:
474 3 0.01
475 296 0.53
476 143 0.26
477 118 0.21
ACGTcount: A:0.37, C:0.13, G:0.19, T:0.31
Consensus pattern (476 bp):
AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACATTGATTCTAT
CAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACCTCAAAGCATCAATTTCATGTATCCTAATGA
AGAGAATGTGTTTTGGCTCAGATTCTCGCAAAGAATGGAAATTGTTATGAGAAACAATGCTTGTC
TTATTTAAGGGACAAACTTTGATTTAAAGAAAAATAGGGCAAAGAAAAGATTTCAATGCAAAAGA
AAATAATCAATATCATTTATCCTAATGAGGAGAAATCTGTTTATAGTGCCTAATCACAAAAAATA
TGAAGATAATTACTAGAATCCAAGTTTGTCTCATTTCAGGCACGAACTTAAACTTTACAAAAAAT
GGTGGGAAAAAAGCCTTTCTTACGAAACAAAAGCATCAATATGACGTATCCTAAAGACAAGACAA
TGTTTATGCTGCCTAATCCAG
Found at i:2629740 original size:476 final size:472
Alignment explanation
Indices: 2628841--2630926 Score: 2937
Period size: 476 Copynumber: 4.4 Consensus size: 472
2628831 AGACAGTTAT
* * * * *
2628841 GAGAATCTGTTTATAGTGCCTAATCACAAAATGAATGAAGTTCATTACAAGAATCCAAGTTTATC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTC
* * *
2628906 TTATTTGAGGCACGAACTTAGACTTTACAAAAAATGGTGGGAGAAATGCCTTTCTTACGAAACGA
66 TCATTTGAGGCACGAACTTAAACTTTACAAAAAATGGTGGGA-AAAAGCCTTTCTTACGAAACGA
* * * * *
2628971 AAGCATCAATATGATGTATCTTATTGAGAAGACTATGTTTATGGTGCCTTATGCTGAAAAGAATG
130 AAGCATCAATATGATGTATCTTA--AAGAAGACAATGTTTATGGTGCCTAATCCGGAAAAGAATG
*
2629036 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACATTGATTCTATCAAAAACGG
193 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
* * * *
2629101 TAGAAGGAAAAGTCTTTCTTGCGAC-CCTAAAGCATCAATTTGATGTATCCTAATGAAGGGAATG
258 TGGAAGGAAAAGTTTTTCTTGCGACATC-AAAGCATCAATTTCATGTATCCTAATGAAGGGAATG
* * * *
2629165 TGTTTTTGCTCCGATTCTCATAAAGAATGGAGATTGTTACAAG-AATCAATGCTTGTCTTATTTA
322 TGTTTTGGCTCCGATTCTCGTAAAGAATGGAGATTGTTACGAGAAAT-GATGCTTGTCTTATTTA
* * *
2629229 AGGGACGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCAT
386 AGAGATGAACTTTGATTTAAAGGAAAATAGGGCAAACAAAAGATTTCCATGCAAAAGAAAATCAT
*
2629294 CAATATCATTTATCATAATGAG
451 CAATATCATTTATCTTAATGAG
2629316 GAGAAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGT
1 GAG-AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGT
* * *
2629381 CTCATTTGAGGCACGAACTTAAACTTTACAAAATATGGTGGGAAAAAGCCCTTTCTTGCAAAACG
65 CTCATTTGAGGCACGAACTTAAACTTTACAAAAAATGGTGGGAAAAAG-CCTTTCTTACGAAACG
* * * *
2629446 AAAGCATCAATATGATGTATCGTAAAGAATGGACTATGTTTATGGTGCCTAATCCCGAAAAAAAT
129 AAAGCATCAATATGATGTATCTTAAAGAA--GACAATGTTTATGGTGCCTAATCCGGAAAAGAAT
* * **
2629511 GGGGATTAGTATGAGTATTTATGTTTGTCTTATTTAAGAGACAAACTTTGATTATGCCAAAAACG
192 GGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACG
* * * *
2629576 ATGGAAGGAAAAGTTTTTCTTGTGACCTCAAAGCATCAATTTCATGTATCCTAATGAAGAGAATG
257 GTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATG
*
2629641 TGTTTTGGCTCCGATTCTCGTAAAGAATGGAGATTGTTACGAGAAATGATGTTTGTCTTATTTAA
322 TGTTTTGGCTCCGATTCTCGTAAAGAATGGAGATTGTTACGAGAAATGATGCTTGTCTTATTTAA
* *
2629706 GAGATGAACTTTGATTTACAA-GAAAATAGGGCAAAGAAAAGATTTCCATGCAAGAGAAAATCAT
387 GAGATGAACTTTGATTTA-AAGGAAAATAGGGCAAACAAAAGATTTCCATGCAAAAGAAAATCAT
*
2629770 CAATATCCTTTATCTTAATGAG
451 CAATATCATTTATCTTAATGAG
* *
2629792 GAGAAATGTGTTTATAGTGCCTAATCACAAAATGATTGAAGATCATTACTAGAATCCATATTTGT
1 GAG-AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGT
* **
2629857 CTCATTTGAGGCACAAACTTAAAAATTACAAAAAAATGGTGGGAAAAAGCCTTTCTTACGAAACG
65 CTCATTTGAGGCACGAACTTAAACTTTAC-AAAAAATGGTGGGAAAAAGCCTTTCTTACGAAACG
** * * *
2629922 AAAGCATCAATATGATGTATCCAAATGAGAAGGCAATGTTTGTGGTGCCTAATCTGGAAAAGAAT
129 AAAGCATCAATATGATGTATCTTAA--AGAAGACAATGTTTATGGTGCCTAATCCGGAAAAGAAT
* *
2629987 GAGGATTAGTATTAGTATTCATGTTTGTCTTATTTAA-AGGACAAACTTTGATTCTATCAAAAAC
192 GGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGA-GACAAACTTTGATTCTATCAAAAAC
* * *
2630051 GGTGGAAGGAAAAGTTTTTCTTACGATATCAAAGCATCAATTTGATGTATCCTAATGAAGGGAAT
256 GGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGGGAAT
* * * * * *
2630116 GTGTTTTGGCTCCAATTCTTGCAAAAAATGGAGATTGTTATGAGAATTGATGCTTGTCTTATTTA
321 GTGTTTTGGCTCCGATTCTCGTAAAGAATGGAGATTGTTACGAGAAATGATGCTTGTCTTATTTA
* *
2630181 AGAGATGAACTTTGATTTAAAAGAAAATAGGGCAAACAAAAGATTTTCATGCAAAAGAAAATCAT
386 AGAGATGAACTTTGATTTAAAGGAAAATAGGGCAAACAAAAGATTTCCATGCAAAAGAAAATCAT
* *
2630246 CAATATCATTTATCCTAGTGAG
451 CAATATCATTTATCTTAATGAG
* *
2630268 GAGAATGTGTTTATAGTGCCTTATCACAAAATGAATGAAGATAATTACTAGAATCCATGTTTGTC
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTC
* *
2630333 TCGTTTGAGGCATGAACTTAAACTTTACAAAAAAATGGTGGGAAAAAGCCTTTCTTACGAAACGA
66 TCATTTGAGGCACGAACTTAAACTTTAC-AAAAAATGGTGGGAAAAAGCCTTTCTTACGAAACGA
** *
2630398 AAGCATCAATATGATGTATCCTATTGAGAAGACATTGTTTATGGTGCCTAATCCGGAAAAGAATG
130 AAGCATCAATATGATGTAT-CT-TAAAGAAGACAATGTTTATGGTGCCTAATCCGGAAAAGAATG
* * *
2630463 GGGATTAGTATGAGTATTCATGTTTATCTTATTTAAAAGACAAACTTTGATTCTATCAAAAATGG
193 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
* * * *
2630528 TGGAAGCAAAAGTTTTTCTAGCGACATCAAAGCATCAATTTCATGTATCCTAAGGAGGGGAATGT
258 TGGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGT
* * * * *
2630593 GTTTTGGCTTCAC-AATCT-TTGAAAGAACT-GAGATAGTTATGAGAATTGATGCTTGTCTTATT
323 GTTTTGGC-TC-CGATTCTCGT-AAAGAA-TGGAGATTGTTACGAGAAATGATGCTTGTCTTATT
*
2630655 TAAGAGATGAACTTTGATTTAAAGGAAAATAGGGCAAACAAAAGATTTTCATGCAAAA-AAAATC
384 TAAGAGATGAACTTTGATTTAAAGGAAAATAGGGCAAACAAAAGATTTCCATGCAAAAGAAAATC
*
2630719 ATCAATATCATTTATCTTAGTGAG
449 ATCAATATCATTTATCTTAATGAG
* ** * *
2630743 GAGAATGTGTTTATAGTGCTTAATCTTAAAATGAATGAAGGTCATTACTAGAATCCATGTTTGTT
1 GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTC
* * * * ** *
2630808 TCTTTTGAAGCATGAACTTAGACTTTACAAAAAATGACGGGAAAAAAAACCTTTCTTACGAAACG
66 TCATTTGAGGCACGAACTTAAACTTTACAAAAAATGGTGGG--AAAAAGCCTTTCTTACGAAACG
* *
2630873 AAAGTAACAATATGATGTATCTTAATGAGAAGACAATGTTTATGGTGCCTAATC
129 AAAGCATCAATATGATGTATCTTAA--AGAAGACAATGTTTATGGTGCCTAATC
2630927 TAGAAAATCA
Statistics
Matches: 1454, Mismatches: 134, Indels: 45
0.89 0.08 0.03
Matches are distributed among these distances:
474 16 0.01
475 421 0.29
476 987 0.68
477 26 0.02
478 4 0.00
ACGTcount: A:0.37, C:0.13, G:0.19, T:0.31
Consensus pattern (472 bp):
GAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTC
TCATTTGAGGCACGAACTTAAACTTTACAAAAAATGGTGGGAAAAAGCCTTTCTTACGAAACGAA
AGCATCAATATGATGTATCTTAAAGAAGACAATGTTTATGGTGCCTAATCCGGAAAAGAATGGGG
ATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGG
AAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTT
TTGGCTCCGATTCTCGTAAAGAATGGAGATTGTTACGAGAAATGATGCTTGTCTTATTTAAGAGA
TGAACTTTGATTTAAAGGAAAATAGGGCAAACAAAAGATTTCCATGCAAAAGAAAATCATCAATA
TCATTTATCTTAATGAG
Found at i:2629745 original size:158 final size:156
Alignment explanation
Indices: 2628841--2630933 Score: 707
Period size: 158 Copynumber: 13.2 Consensus size: 156
2628831 AGACAGTTAT
* * * * * * *
2628841 GAGAATCTGTTTATAGTGCCTAATCAC-AAAATGAATGAAG-TTCATTACAAGAATCCAA-GTTT
1 GAGAATGTGTTTATGGTGCCGAATCTCGAAAA-GAATGGAGATT-GTTACGAGAAT-CAATGTTT
* * * ** * * *
2628903 ATCTTATTTGAG-GCACGAACTTAGACTTTACAAAAAAT-GGTGGGAGAAATGCCTTTCTTACGA
63 GTCTTATTTAAGAG-ACGAACTTTGA-TTTACAAAAAATAGG-GAAAGAAAAGTCTTTCTTGC-A
* * * *
2628966 AACGAAAGCATCAATATGATGTATCTTATTG-A
124 AACCAAAGCATCAATATCATGTATCCTAATGAA
* * ** * * *
2628998 GAAGACTATGTTTATGGTGCCTTATGCT-GAAAAGAATGGGGATTAG-TATGAGTATTC-ATGTT
1 G-AGAATGTGTTTATGGTGCCGAAT-CTCGAAAAGAATGGAGATT-GTTACGAG-AATCAATGTT
* * * *
2629060 TGTCTTATTTAAGAGACAAACATTGATTCTATC-AAAAA-CGGTAGAAGGAAAAGTCTTTCTTGC
62 TGTCTTATTTAAGAGACGAACTTTGATT-TA-CAAAAAATAGG--GAAAGAAAAGTCTTTCTTGC
* * * *
2629123 GACCCTAAAGCATCAATTTGATGTATCCTAATGAA
123 AAACC-AAAGCATCAATATCATGTATCCTAATGAA
* * * * * *
2629158 GGGAATGTGTTTTTGCT-CCGATTCTC-ATAAAGAATGGAGATTGTTACAAGAATCAATGCTTGT
1 GAGAATGTGTTTATGGTGCCGAATCTCGA-AAAGAATGGAGATTGTTACGAGAATCAATGTTTGT
* * *
2629221 CTTATTTAAGGGACGAACTTTGATTTA-AAGGAAAATAGGGCAAAGAAAAGAT-TTCCATGCAAA
65 CTTATTTAAGAGACGAACTTTGATTTACAA--AAAATAGGG-AAAGAAAAG-TCTTTCTTGC-AA
** * * * *
2629284 AGAAAATCATCAATATCATTTATCATAATGAG
125 ACCAAAGCATCAATATCATGTATCCTAATGAA
* * * * ** * *
2629316 GAGAAATGTGTTTATAGTGCCTAATCAC-AAAATGAATGAAGATCATTACTAGAATCCATGTTTG
1 GAG-AATGTGTTTATGGTGCCGAATCTCGAAAA-GAATGGAGATTGTTACGAGAATCAATGTTTG
* * ** * ** *
2629380 TCTCATTTGAG-GCACGAACTTAAACTTTACAAAATAT-GGTGGGA-AAAAGCCCTTTCTTGCAA
64 TCTTATTTAAGAG-ACGAACTTTGA-TTTACAAAAAATAGG-GAAAGAAAAG-TCTTTCTTGC-A
* * * *
2629442 AACGAAAGCATCAATATGATGTATCGTAAAGAA
124 AACCAAAGCATCAATATCATGTATCCTAATGAA
* * * * * * * * **
2629475 TG-GACTATGTTTATGGTGCCTAATCCCGAAAAAAATGGGGATTAG-TATGAGTATTTATGTTTG
1 -GAGAATGTGTTTATGGTGCCGAATCTCGAAAAGAATGGAGATT-GTTACGAGAATCAATGTTTG
* * ** * * * ** *
2629538 TCTTATTTAAGAGACAAACTTTGATTATGCCAAAAACGATGGAAGGAAAAGTTTTTCTTGTGACC
64 TCTTATTTAAGAGACGAACTTTGATT-T-ACAAAAAATAGGGAAAGAAAAGTCTTTCTTGCAAAC
*
2629603 TCAAAGCATCAATTTCATGTATCCTAATGAA
127 -CAAAGCATCAATATCATGTATCCTAATGAA
* * *
2629634 GAGAATGTGTTT-TGGCT-CCGATTCTCGTAAAGAATGGAGATTGTTACGAGAAAT-GATGTTTG
1 GAGAATGTGTTTATGG-TGCCGAATCTCGAAAAGAATGGAGATTGTTACGAG-AATCAATGTTTG
* * *
2629696 TCTTATTTAAGAGATGAACTTTGATTTACAAGAAAATAGGGCAAAGAAAAGAT-TTCCATGCAAG
64 TCTTATTTAAGAGACGAACTTTGATTTACAA-AAAATAGGG-AAAGAAAAG-TCTTTCTTGCAA-
** * * * * *
2629760 AGAAAATCATCAATATCCTTTATCTTAATGAG
125 ACCAAAGCATCAATATCATGTATCCTAATGAA
* * * * * ** * * *
2629792 GAGAAATGTGTTTATAGTGCCTAATCAC-AAAATGATTGAAGATCATTACTAGAATCCATATTTG
1 GAG-AATGTGTTTATGGTGCCGAATCTCGAAAA-GAATGGAGATTGTTACGAGAATCAATGTTTG
* * * ** * ** * *
2629856 TCTCATTTGAG-GCACAAACTTAAAAATTACAAAAAA-ATGGTGGGA-AAAAGCCTTTCTTACGA
64 TCTTATTTAAGAG-ACGAACTT-TGATTTACAAAAAATA-GG-GAAAGAAAAGTCTTTCTTGC-A
* * *
2629918 AACGAAAGCATCAATATGATGTATCCAAATG-A
124 AACCAAAGCATCAATATCATGTATCCTAATGAA
* * * ** *
2629950 GAAGGCAA--TGTTTGTGGTGCCTAATCTGGAAAAGAAT-GAGGATTAG-TATTAGTATTC-ATG
1 G-A-G-AATGTGTTTATGGTGCCGAATCTCGAAAAGAATGGA-GATT-GTTACGAG-AATCAATG
* ** * *
2630010 TTTGTCTTATTTAA-AGGACAAACTTTGATTCTATC-AAAAACGGTGGAAGGAAAAGTTTTTCTT
60 TTTGTCTTATTTAAGA-GACGAACTTTGATT-TA-CAAAAAATAG-GGAAAGAAAAGTCTTTCTT
* * * * *
2630073 ACGATATCAAAGCATCAATTTGATGTATCCTAATGAA
121 GC-AAACCAAAGCATCAATATCATGTATCCTAATGAA
* * * ** *
2630110 GGGAATGTGTTT-TGGCT-CC-AATTCTTGCAAAA-AATGGAGATTGTTATGAGAATTGATGCTT
1 GAGAATGTGTTTATGG-TGCCGAA-TCTCG-AAAAGAATGGAGATTGTTACGAGAATCAATGTTT
* * * *
2630171 GTCTTATTTAAGAGATGAACTTTGATTTAAAAGAAAATAGGGCAAACAAAAGAT-TTTCATGCAA
63 GTCTTATTTAAGAGACGAACTTTGATTTACAA-AAAATAGGG-AAAGAAAAG-TCTTTCTTGC-A
** * * * *
2630235 AAGAAAATCATCAATATCATTTATCCTAGTGAG
124 AACCAAAGCATCAATATCATGTATCCTAATGAA
* ** * * ** * *
2630268 GAGAATGTGTTTATAGTGCCTTATCAC-AAAATGAATGAAGATAATTACTAGAATCCATGTTTGT
1 GAGAATGTGTTTATGGTGCCGAATCTCGAAAA-GAATGGAGATTGTTACGAGAATCAATGTTTGT
** * * ** ** * *
2630332 CTCGTTTGAG-GCATGAACTTAAACTTTACAAAAAA-ATGGTGGGA-AAAAGCCTTTCTTACGAA
65 CTTATTTAAGAG-ACGAACTTTGA-TTTACAAAAAATA-GG-GAAAGAAAAGTCTTTCTTGC-AA
* * *
2630394 ACGAAAGCATCAATATGATGTATCCTATTG-A
125 ACCAAAGCATCAATATCATGTATCCTAATGAA
* * * *
2630425 GAAGACAT-TGTTTATGGTGCCTAATC-CGGAAAAGAATGGGGATTAG-TATGAGTATTC-ATGT
1 G-AGA-ATGTGTTTATGGTGCCGAATCTC-GAAAAGAATGGAGATT-GTTACGAG-AATCAATGT
* * * * * *
2630486 TTATCTTATTTAAAAGACAAACTTTGATTCTATC-AAAAAT-GGTGGAAGCAAAAGTTTTTCTAG
61 TTGTCTTATTTAAGAGACGAACTTTGATT-TA-CAAAAAATAGG-GAAAG-AAAAGTCTTTCTTG
* * * * *
2630549 CGACATCAAAGCATCAATTTCATGTATCCTAAGGAG
122 C-AAACCAAAGCATCAATATCATGTATCCTAATGAA
* * * * * ** *
2630585 GGGAATGTGTTT-TGGCTTCAC-AATCTTTG-AAAGAACT-GAGATAGTTATGAGAATTGATGCT
1 GAGAATGTGTTTATGG-TGC-CGAATC-TCGAAAAGAA-TGGAGATTGTTACGAGAATCAATGTT
* * *
2630646 TGTCTTATTTAAGAGATGAACTTTGATTTA-AAGGAAAATAGGGCAAACAAAAGAT-TTTCATGC
62 TGTCTTATTTAAGAGACGAACTTTGATTTACAA--AAAATAGGG-AAAGAAAAG-TCTTTCTTGC
** * * * * *
2630709 AAAAAAAATCATCAATATCATTTATCTTAGTGAG
123 AAACCAAAGCATCAATATCATGTATCCTAATGAA
* ** * * * ** * *
2630743 GAGAATGTGTTTATAGTGCTTAATCT-TAAAATGAATGAAGGTCATTACTAGAATCCATGTTTGT
1 GAGAATGTGTTTATGGTGCCGAATCTCGAAAA-GAATGGAGATTGTTACGAGAATCAATGTTTG-
* * * * ** *
2630807 TTCTT-TTGAAG-CATGAACTTAGACTTTACAAAAAATGACGGGAAA-AAAAACCTTTCTTACGA
64 -TCTTATTTAAGAGACGAACTTTGA-TTTACAAAAAAT-A-GGGAAAGAAAAGTCTTTCTTGC-A
* * * * *
2630869 AACGAAAGTAACAATATGATGTATCTTAATG-A
124 AACCAAAGCATCAATATCATGTATCCTAATGAA
* * *
2630901 GAAGACA-ATGTTTATGGTGCCTAATCTAGAAAA
1 G-AGA-ATGTGTTTATGGTGCCGAATCTCGAAAA
2630934 TCATCAATAT
Statistics
Matches: 1427, Mismatches: 369, Indels: 277
0.69 0.18 0.13
Matches are distributed among these distances:
156 4 0.00
157 59 0.04
158 678 0.48
159 520 0.36
160 152 0.11
161 12 0.01
162 2 0.00
ACGTcount: A:0.37, C:0.13, G:0.19, T:0.31
Consensus pattern (156 bp):
GAGAATGTGTTTATGGTGCCGAATCTCGAAAAGAATGGAGATTGTTACGAGAATCAATGTTTGTC
TTATTTAAGAGACGAACTTTGATTTACAAAAAATAGGGAAAGAAAAGTCTTTCTTGCAAACCAAA
GCATCAATATCATGTATCCTAATGAA
Found at i:2631866 original size:475 final size:475
Alignment explanation
Indices: 2630928--2658080 Score: 31645
Period size: 475 Copynumber: 57.6 Consensus size: 475
2630918 TGCCTAATCT
* * *
2630928 AGAAAATCATCAATATCATTTATCCTAATGAAGAGATTCTGTTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2630993 AATGAAGTTCATTACTAGAATCCAAGTTTTTCT-TATTTAAGGCACGAACTTAGATTTTACAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAGGCACGAACTTAGACTTTACAAAA
* * * * * * *
2631057 AATGGTGGGAGAAAATCCTTTCTTACAAAACGAAAGCATCAATATGATATATCTTATTA-AGAAG
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTA-AAGAGAAG
*
2631121 ACTATGTTTGTGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
194 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * *
2631186 TTTAAGAGACAAACATTGATTCTATCAAAAATGGTGGAAGAAAAAGTTTTTCTTGCGACCCCAAA
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
* *
2631251 GCATCAATTTGATGTATCCTAATGAAGGGAATGTGTTTTGGC-TC-CAATTCTTGCAAAGAATGG
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAA-TCTTGAAAAGAATGG
* * * *
2631314 AGATTGTTACAAGAAACAATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGGAAATAGG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGG
* * *
2631379 GCAAAGAAAAGATTTCCTTACAAT
452 GCAAAGAAAAGATTTCCATGCAAA
* * * * *
2631403 AGAAAATCATCAATATCATTTATCCCAATGAGGATAATGTGTTTATATTGCCTAACCCCAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2631468 AAAGAAAATCATTATTAGAATCTATATTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * ** * * *
2631533 ATGGTTAGG-AAAAAGCCTTTCTTGCGAAATGAAAATAGCAATATGATGTATCGTAAAGAGAAAA
131 ATGG-TGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* *
2631597 CAATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAC
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * *
2631662 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTGTTGTGACATCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * *
2631727 CATAAATATCATGTATCCTAATGAAGGGATTGTGTTTTGGCTTCACAATCTTGAAAAGAACGGAG
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAATGGAG
*** * *
2631792 ACAATTACGAGAATCGATTCTTGTCTTATTTAAGGTATGAACATCTT-TTTAAAGGAAAATA-GG
390 ATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAAC-T-TTATTTAAAGGAAAATAGGG
* * *
2631855 CAAACAAAAGATTTTCAAAGCAAA
453 CAAAGAAAAGA-TTTCCATGCAAA
* * * *
2631879 AGAAAATCATCAATATCAATTT-TCCTAATAAGGAGAATATGTTTATAGTACCTAATCATAAAAT
1 AGAAAATCATCAATATC-ATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
** * * *
2631943 GAATGAAGATCATTACTAGAATCCAAATTTGTCTCATTTGAAGTACGAACTTAGACTTTACAAAA
65 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
* *
2632008 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGTTGTATCCTAAAGAGACGA
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* *
2632073 CTATGTTTATAGTGCATTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * * *
2632138 TCAAGAGACAAA-TTTGATTCTATCAAAAATGGGGGAAGGAAAAGTTTTTCTTACGATACCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * ** * *
2632202 CATCAATTTCATGTATCCTAAGGAAGAGAATGTGTTTTGGC-TCTGATTC-TCATAAAGAATGGA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGA-AAAGAATGGA
* * * * * ** *
2632265 GATTGTTATGAGAAGCAATGCTTATCTTTTTTAAGAAATGAACTTAGATTTAAAGGAAAATAGGG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTT-TATTTAAAGGAAAATAGGG
*
2632330 CAAAGAAAAGATTTCCATACAAA
453 CAAAGAAAAGATTTCCATGCAAA
* * * *
2632353 AGAAAATCATCAACATCATTTATCCTAATGAGGAGAACGTGTTTACAGTGCCTAATCATAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * *
2632418 AATGAAGATCATTACTAGAATCGAAGTTTGTCT-TATTTGAGGCACGAACTTAAACTTCACAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAGGCACGAACTTAGACTTTACAAAA
* * * *
2632482 AATAGTGGGAAAAAAGCCTTTCATACGAAACGAAAGCATCGATATGATGTATCC-AAATGAGAAG
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAA-GAGAAG
* * ** * * *
2632546 ACAATGTTTTTCATGCCTAATCC-GAAAAAGAATGGGGATTAGTATGAGCATTCATGTTTGTCCT
194 ACTATGTTTATGGTGCCTTATCCTG-AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* *
2632610 ATTTAAGAGACAAACTTTGATTCTATCAAAAACAGTGGAAGGAAAAGTTTTTCTTGCGACCCCAA
258 ATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAA
* * *
2632675 AGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTTGC-TC-CGATTCTTGCAAAGAATG
323 AGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCAC-AATCTTGAAAAGAATG
* * * *
2632738 GAGATTGTTACGAGAAACAATGCTTATCTTATTTAAGGGATGAGCTTTGATTTAAA-GAAAATAG
387 GAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAG
2632802 GGCAAAGAAAAGATTTCCATGCAAA
451 GGCAAAGAAAAGATTTCCATGCAAA
* * * * * *
2632827 AGAAAATCATCAATATTATTTATCCTATTGAGGAGAATGCGTTTAGAGTGCTTAACCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2632892 AAAGAAAATCATTACTAGAATCTATGTTTGTCGCTTTTGAAGCACGAACTTAGACTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * *
2632957 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGGATCAATATGATATATCGTAAAGAGAAGGC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * *
2633022 TATGTTTATGGTGCCTAATCCAGAAAAGAATGCGGATTAGTATGAGTATTCATGTTTCTCTTATT
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * *
2633087 TAAGAGACAAACTTTGATTCTATCAAAAACAGTGGAAGGAAAAGTTTTTCTTTCGACATCAAAGA
261 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGC
** * * *
2633152 ATCAATGCCATGTATCCTAATGAAGAGAATGTGTTTTAGCTTCACAATCTTGAAATGAACT-GAG
326 ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGAG
* * * * *
2633216 ATAGTTACGAGAATCGATGCTTGTCTTATTTAAGAGATGAGCTTTGTTTTAAAGGAAAATAGGGG
390 ATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGGC
* *
2633281 AAAGAAAATATTTGCATGCAAA
454 AAAGAAAAGATTTCCATGCAAA
2633303 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * **
2633368 AATGAAGATTATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACAAACTTAGACTTTA-TGAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * * *
2633432 ATGGTGGGAAAAAAGCCTTTCATGTGAAATGAAAGCATCAATATGATGTGTCCTAATGAGAAGGC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * *
2633497 TATGTTTATGTTGTCTTATCCTAAAAAGAATGGGGATTAGTATGAGTATTCACGTTTGTC-----
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * *
2633557 T----GA-TAA---TGATTCTATCAAAAACGGCGGAAGGAAAAGTTTTTCTTGCGACATCAAAGC
261 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGC
*** * *
2633614 ATCAACACCATGAATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAATGAACT-GAG
326 ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGAG
* * * * *
2633678 ATAGTTACGAGAATCGATGCTTGTCTTATTTAAGAGATGAGCTTTGTTTTAAAGGAAAATAGGGG
390 ATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGGC
* *
2633743 AAAGAAAATATTTGCATGCAAA
454 AAAGAAAAGATTTCCATGCAAA
* *
2633765 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCTTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * *
2633830 AATGAAGATCAGTACTAGAATCCATGTTTGTCTCTTTTGAGGCACAAACTTAGACTTTGCAAAAG
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * *
2633895 ATGGTGGGAAAAAAGCCTTTCATGTGAAACGAAAGCATCAATATGATGTATCCTAATGAGAAGGC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * *
2633960 TATGTTTATGTTGTCTTATCCTGAAAAGCATGGGGATTAGT-TAGAGTATTCATGTTTGTC----
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTAT-GAGTATTCATGTTTGTCTTAT
* * * * * * **
2634020 -T----GATAATCTTTGAATCTATTAAAAAAGGTGGAAAGAAAAGTTTTTCTTTTGACACACAAA
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACAC-CAAA
* * * * * *
2634080 GCATCAATTTCATGTATCCTAATGAAGGGAACGTGTTTGGGCTTC-GATTCTCGTAAAA-AAGGG
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTG-AAAAGAATGG
* * * * *
2634143 AGATTGTTACAAGAAACGATGCTTGTCTTTTTTAAGGGATGAATTTTGATTTAAAGGAAAATAAG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGG
*
2634208 GCCAAGAAAAGA-TTCACATGCAAA
452 GCAAAGAAAAGATTTC-CATGCAAA
* * **
2634232 AGAAAACCATTAATATCATTTATGGTAATGAGGAGAATGTGTTTAT-GTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * * *
2634296 AATGGAGATCATTACTAGAGTCCAAGTTTGTCTCATTTGAGGCACAAACTTAGACTTTTCAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * ** *
2634361 ATGGTGGGAAAAATGCCTTTCTTACGAAATGAAAGCATCAATATGATGTATCCTATTGACAAGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* ** * * * *
2634426 AATGTTTATGGTGCCAAAT-CAGAAAAAGAATGGGGTTTAGTTTGAGTATTCTTGTTTGTCTTAT
196 TATGTTTATGGTGCCTTATCCTG-AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * * * *
2634490 TTAAGAGATAAACTTTGATTCTATCAAAAACGGTGTAAAGAAAAATTTTTCTTGCAACACCAAAA
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * *
2634555 CATCAATTTCACT-AATCCTAATGAAGGGAATGCGTTTTGGCTTCACAATCATGAAAAGAACT-G
325 CATCAATTTCA-TGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGG
** * *
2634618 AGACAGTTACGAGAATCGATGGC-TGTATTATTTAAGGGATGAACTTTAATTTAGAGGAAAATAG
388 AGATTGTTACGAGAATCGAT-GCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAG
* *
2634682 GGCAAAGAAAAGATTTTCATGCAGA
451 GGCAAAGAAAAGATTTCCATGCAAA
* * * *
2634707 AGAAAATCATCAATATCTTTTATCCAAATGAGGAGAATGAGTTGATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* *
2634772 AATGAAGATCATTACTAGAATCCACGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA-AAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* *
2634836 TTTGGTGGGAAAAAATG-CTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
131 -ATGGTGGGAAAAAA-GCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* * * * * * *
2634900 ACAATGTTTAAGTTGCCTTATCTTGAAAAGAGTGGGGATTAGTATGAGTATTCTTGTTTTTCTTA
194 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * * * **
2634965 TTTAAGGGATAAACTTTGATTCAATCAAAAAGGGTGGATGGAAAAGTTTTTCTTATGACACCAAA
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
* ** * *
2635030 GCATCAATTTCATGTATCCTAATGAAGGAAATGTGTTTTGGC-TCTGATTCTTGTAAAGAATGGA
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAATGGA
* * * * *
2635094 GATTGTTACAAGAAACGATGCTTGTCCTATTTAAGGAAT-AACTTTGATTTAAAGGAAAATAGAG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGG
2635158 CAAAGAAAAGATTTCCATGCAAA
453 CAAAGAAAAGATTTCCATGCAAA
* * *
2635181 AGGAAATCATCAATATCATTTATCCTAATGAGGAGAATGTATTTATTGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2635246 AATGAAGATCATTACTAGAATCAAAGTTTGTGTCATATGAGGCACGAA-TATAGACTTTACAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACT-TAGACTTTACAAAA
* * * * * * * *
2635310 AATGGTAGGAAAAAAGCCTTCCATACGAAACGAAAGCATCAATGTGGTGCATCTTAAAGAGAAGA
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * * * * * *
2635375 CAATTTTTATGGTGCCTAATTCAGAGAAGAAGGGGGATTAGT-TAGAGTATTCAGGTTTGTCTTA
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTAT-GAGTATTCATGTTTGTCTTA
* * * ** *
2635439 TTTAAGAAACAAACTTTGAATCTATCACAAACGGTGGAAGGAAAAGTTTTTCTTATGACACCAAT
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
* * * * *
2635504 GCATCACTTTCATGTATCTTAATGAAGGGAATGTGTTTTGGC-TC-CGATTCTCGTAAAGAATGG
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCAC-AATCTTGAAAAGAATGG
* * *
2635567 CGATTGTTACGAGAATTGATGCTTGTCTTCTTTAAGGGATGAACTTTGATTTAAAGGAAAATA-G
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGG
*
2635631 GCAAAGAAAAGATTTTCATGCAAA
452 GCAAAGAAAAGATTTCCATGCAAA
* * * *
2635655 AGAAAATGATCAATTTCATTTATCCTAATGAGGGGAATGTG-TTATAGTGCCTAATCACAAAATC
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * *
2635719 AATGAAGATCATTACTAGAATCCAAGTTTGTCTCATATGAGGCA-TAGACTTAGACTTTACAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGA-ACTTAGACTTTACAAAA
* * *
2635783 AATGGTGGGAAAAAAGCCTTTCTTACGAAACGAAAGCATCAATACGATGTATCCTAATGA-AAGA
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * *
2635847 CAATGTTTATGGTGCCTAAT-CTAGAAAAGAATGGGGATTAATATGACTATTCATGTTTGTCTTA
195 CTATGTTTATGGTGCCTTATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* *
2635911 TTTAAGAG--AAACTTTGATTCTATCAAAAACGGTGGAGGGAAAAGTTTTTCTTGCGACCCCAAA
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
* * * *
2635974 GCATCATTTTCATGTATCCTAATGAAGGGAATATGTTTTGGC-TC-CGAT-TCTCATAAAGAATG
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCT-TGA-AAAGAATG
* ** * * *
2636036 GCGATTACTACGAGAAGCGATGCTTGTCTTCTTTAAGGGATGAACTTTGATTTAAATGAAAATAG
387 GAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAG
* *
2636101 GGCAAAGAAAAGATTTTCATGCAAT
451 GGCAAAGAAAAGATTTCCATGCAAA
* * *
2636126 AG-AAATCATCAATATCATTTATCCTAGT-AGGGAGAATGTGTTTATAGTGCCTGACCACAAAAT
1 AGAAAATCATCAATATCATTTATCCTAATGA-GGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * * *
2636189 AAAAGAAGATCATTACTAGAATCCATGTTTGTCTCTTTCGAAGCATGAACTTAGACTTTACAAAA
65 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
* * * * *
2636254 AATGGTGGGAAAAAAGCCTTTCTTACAAAACAAAAGCATCAATATGATGTATCCCAATGAGAAGA
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * * *
2636319 CAATGTTTATGGGGCCTAATCCAGAAAAGAATGGGGATTAGTATGAGTATTCGTGTTTGTCTTAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* *
2636384 TTATGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * * * *
2636449 CATCGATGTCTTGTATCCGAATGAAGGGAATGTGTTTTGGCTTCACATTCTTCAAAAGAACT-GA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGA
* * * * * * *
2636513 GATAGTTACGAGAATTGATTCTTTTCTTATTTAAGGTATGAACTTCATTTTAATGGAAAATA-GG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTA-TTTAAAGGAAAATAGGG
*
2636577 CAAAGAAAA-ATTTCCGGTGCAAA
453 CAAAGAAAAGATTTCC-ATGCAAA
* * *
2636600 AGAAAGTCATCAATATCATTTATCCTAATAAGGACAATGTGTTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2636665 AATGAAGATCGTTGCTAGAATCCATGTTTGTCTCTTTCGAAGCACGAACTTAGACTTTGCAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * *
2636730 ATGGTGGGAAAAAAGCCTTTCATGCGAAATGAAACCTTCAATATGATGTATCCTAAAGAGAAGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * *
2636795 TATGTTTGTAGTGCCTTATCTTGAAAAGAATGGGGATTAGTATGGGTATTCATGTTTGTCTTATT
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * *
2636860 TAAGAGACAAACTTTGATT-TGATCAAAAACAGTGGAAGGAAAAGCTTTTCTTACGACATCAAAG
261 TAAGAGACAAACTTTGATTCT-ATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * * *
2636924 CATCAATTTCATGTGTGCTAATGAAGGGATTGTGTTTTGCCTTCACAATCTTGAAATGAACT-GA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGA
* * * * *
2636988 GA-AGTTTCGAGAATTGATGTTTGTCTTATTTAAGGAATGAACTTTGATTTAAAGGAAAATAGGG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGG
* *
2637052 AAAAAAAAAGA-TTCACATGCAAA
453 CAAAGAAAAGATTTC-CATGCAAA
* * * *
2637075 AGAAAACCATCAATATCATTTATCCTAATGAGGTGAATGTGTTTATAATGCCTAATCATAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * * *
2637140 AGTGAAGATCATTACCAGAATCCAAGTTTGTCTCATTTGAGGCTCGAACTTAGACTTTACAAAAT
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * * *
2637205 TTGGTGGGAAAAAAGCCTTTCATGCAAAAAGAAAGCTTCAATATGATGTATCCTAAAGAGAAGGC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * *
2637270 TTTGTTTGTAGTGCCTTAT-CTAGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
196 TATGTTTATGGTGCCTTATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * *
2637334 TTAAGAGGCAAACTTTGATTCTATCAAAAATGGTGGAAGGAAATAGTTTTTCTTGCAACATCAAA
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAA-AGTTTTTCTTGCGACACCAAA
* * * * * *
2637399 CCATCAATGTCATGTATCCTAATGAAGGGAATTTGTTATGGCTTCACAATCTTGAAATGAACT-A
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGG
** * *
2637463 AGACAGTTACGAGAATTGATGCTTGTCTTATTTATGGGAAT-AACTTTGATTTAAAGGAAAATAG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGG-ATGAACTTT-ATTTAAAGGAAAATAG
* **
2637527 GGGAAAGAAAAGATTTGAATGCAAA
451 GGCAAAGAAAAGATTTCCATGCAAA
* *
2637552 AGAAAATCATCAATATCATTTATCCTAAGGAGGAGAATGTATTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* **
2637617 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACAAACTTAGACTTTA-TGAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * *
2637681 ATGGTGGGAAAAAAGCCTTTCATGTGAAACGAAAGCATCAATATGATGTGTCCTAATGAGAAGGC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * *
2637746 TATGTTTATGTTGTCTTATCCTAAAAAGAATGGGGATTAGTATGAGTATTCACGTTTGTC-----
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * *
2637806 T----GATAATCTTTGATTCTATCAAAAACGGCGGAAGGAAAAGTTTTTCTTGCGACATCAAAGC
261 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGC
*** * * *
2637867 ATCAACACCATGAATCCTAATGAAGGGAATGTGTTTTGGCTTCACGATCTTGAAATGAACT-GAG
326 ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGAG
* * * * * *
2637931 ATAGTGACGAGAATCGATGCTTGTCTAATTTAAGAGATGAGCTTTGTTTTAAAGGAAAATATGGG
390 ATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATA-GGG
* *
2637996 -AAAGAAAATATTTGCATGCAAA
453 CAAAGAAAAGATTTCCATGCAAA
*
2638018 AGAAAATCATCAATATCATTTATCCTAATGAGTAGAATGTGTTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2638083 AATGAAGATCACTACTAGAATCCATGTTTGTCTCTTTTAAGGCACAAACTTAGACTTTGCAAAAG
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * *
2638148 ATGGTGGGAAAAAAGCCTTTCTTGTGAAATGAAAGCATCAATATAATGTATCCTAATGAGAAGGC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * *
2638213 TATGTTTATGTTGTCTTATCCTGGAAAGAATGAGGATTAGTATGAGTATTCATGTTTG-----TT
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * *
2638273 T----GATAATCTTTGATTCTATC-AAAA------AAGGAAAAGTTTTTCTTGCGATACACAAAG
261 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACAC-CAAAG
* * * * * * *
2638327 CATCAATTTCATGTATCCTAATGAAGGGAATATGTTTGGGCTTC-GATTCTCGTAAAA-CAGGGA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTG-AAAAGAATGGA
* * * *
2638390 GATTGTTGCAAGAAACGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAAGAGGG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGG
* * *
2638455 CTAAGAAAATATTTCCATG-GAA
453 CAAAGAAAAGATTTCCATGCAAA
* ** *
2638477 A-AAAATCATAAATATCATTTATCCTGTTGAGGACAATGTGTTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* ** *
2638541 AATGAAGATCATTACTAGAATCCAAGTTTGTCTCACTTGAGGCACGAACTTAGACTTTATAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* *
2638606 ATGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATTCTAAAGAGAAGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
** * * * ** *
2638671 TATGTTTACAGTGCCTAATTCAGAAAAGAATAAGGATTAGCT-TGAGTACTCATGTTTGTC----
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAG-TATGAGTATTCATGTTTGTCTTAT
* * * * * * *
2638731 TTAAGGGACAAACTTTGATTCTATAAAAAATGATGGAAGAAAAAGTGTTTCTTGCGACCCCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * *
2638796 CATCAATTTAATGTATCCTAATG-AGGAGAATGTG-TTTGTC-TCCCAATCTT-ATAAAGAAAGG
325 CATCAATTTCATGTATCCTAATGAAGG-GAATGTGTTTTGGCTTCACAATCTTGA-AAAGAATGG
* * * *
2638857 AGATTGTTACGAGAATTGATGCTTGTCTTATTTAGGGGATGAACTTCGATTTTAAGGAAAATAGG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTT-TATTTAAAGGAAAATAGG
*
2638922 GCAAAGAAAAGATTTCTATGCAAA
452 GCAAAGAAAAGATTTCCATGCAAA
* * *
2638946 A-AGAAATCATCAATTTCATTTATCCTAATGAGGGGAACGTGTTTATAGTGCCTAATCACAAAAT
1 AGA-AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * *
2639010 GAATGAAGATCATTACTAGAATCCATGTTTGACTTTTTTGAGGCACAAACTTAGACTTTATAAAA
65 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
* * * * *
2639075 AATGTTGGGAAAAAAGCCTTTCTTGCGGAGC-AAAGCATCAATATGATGTATCATAAAGAGAAAA
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * * * * *
2639139 CTATTTTTATGGTGCCTTATCCTGAAAAAAATAGGGATTAGTTTAAGTATTCATGTTCGTATTAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * * *
2639204 TTAAGAGACAGACATTGATTCTATCAAAAACCGTGGAAGGAAAAGTTTTTCTTACGACCCCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * * * *
2639269 CATCAATTTCTTGTATCCTAATGAAGGGAATGTGTTTTGGC-TCCCATTCTCGTAAAGAATGGAA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAATGGAG
* ** * *
2639333 ATTGTTATGAGAATTTATGCTTGTCTTATTTAAGGGTTGAACTTTGATTTTAAGGAAAA-ATGGG
390 ATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATA-GGG
**
2639397 CAAAGAAAAGATTTCTGTGCAAA
453 CAAAGAAAAGATTTCCATGCAAA
* * *
2639420 AAAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAATGCCTAACCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * * *
2639485 AATGAAGATCTTTACTAGAATCCAAGTTTATCT-TATTTGAGGCATGAACTTAGACTTTATAGAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAGGCACGAACTTAGACTTTACAAAA
** * * * * *
2639549 TTTGGT-GGAGAAAAAGCCTTTCTTGCAAAATGAAAGCTTCAATATGATGTTTTCTAAAGAGAAG
130 AATGGTGGGA-AAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* ** *
2639613 GCTATGTTTATAATGCCTT-TCCTTAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
194 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * * * * * *
2639677 TTTAAGTGACAAACTTTCAATCTATCACAAATGGTGGAAAGAAAAGTTTTTCTTGTGATACCAAA
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
* * * *
2639742 GCATCAATTTCATGTATCCTAACGAAGGGAATGTGTTTTGGC-TC-CGAT-TCTCATAAAGAATA
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCT-TGA-AAAGAATG
* * *
2639804 GAGATTGTTACGAGAATCAACGCTTGTCTTCTTTAAGGGATGAACTTTGATTTAAAGGAAAATAG
387 GAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAG
**
2639869 GGCAAAGAAAAGATTTTTATGCAAA
451 GGCAAAGAAAAGATTTCCATGCAAA
* * * * *
2639894 AGAAAATCATCAAT-GCTTTTATCCTAGTAAGGAGAATGTGTTTATAGTGCCTAA--ACACAA--
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* *
2639954 AATGAAGATCATTACCAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * *
2640019 ACGGTGGGAAAAAATCCTTTCTTAG-GAAACAAAAGCATCAATATGATGTATCCTAATA-AGAAG
131 ATGGTGGGAAAAAAGCCTTTCTT-GCGAAACGAAAGCATCAATATGATGTATCCTAA-AGAGAAG
* * * * *
2640082 A-TAATGTTAATAGG-G-CTTAATCCGGCAAAGAATGGGGATTAGTGTGAGTATTCGTGTTTGTC
194 ACT-ATGTTTAT-GGTGCCTT-ATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
* * ***
2640144 TTATTTATGAGACAAACTTTGACTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACGTT
256 TTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACC
* * * * * *
2640209 AAAGCAACGATGTCTTGTATCCTAATGAAGGGAATGCGTTTTGGCTTCACATTCTTGAAAAGAAC
321 AAAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-
* * * * * * *
2640274 T-GAGA-CGATTATGAGAATCGATTCTCGTCTTATTTAAGGTATGAACATCGT-TTTGAAGGAAA
385 TGGAGATTG-TTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAAC-T-TTATTTAAAGGAAA
*
2640336 ATA-GGCAAAGAAAA-AATTCCAATGCAAA
447 ATAGGGCAAAGAAAAGATTTCC-ATGCAAA
* *
2640364 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCGCAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * *
2640429 AATGAGGATCATTACTAGAATTCAAGTTTGTCT-TATTTGAAGCACGAACTTAGACTTTACAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAGGCACGAACTTAGACTTTACAAAA
** * * *
2640493 AATGGTGGGAAAAAAGCCTTTCCGGCAAAACGAAAGCATCAATATGATGTATCCTAACGAGAAGG
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * * * *
2640558 CTGTGTTTATGTTGTCGTATCCTGAAAAGAATGGGAATTAGTATGAATATTCATGTTTGTCTTAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * * *
2640623 TTAAGAGACAAACTTTGATTCTATCAAAAACGATGGAAGGAAAAGTTTTTCTAGCTACAACAAAT
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
*
2640688 CCTCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAACT-GA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGA
** * *
2640752 GACAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGAGGAACTTTGATTTAAAGAAAAATAGGG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGG
*
2640817 TAAAGAAAAGATTTCCATGCAAA
453 CAAAGAAAAGATTTCCATGCAAA
* * * *
2640840 A-AAAGATCATCAATATCTTTTATCCTAATGAGGAGAATGCGTTTTTAGTACCTAATCACAAAAT
1 AGAAA-ATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * *
2640904 GAATGAAGATCATTACCAG-ATCCACT-TTTGTCTC-ATTAAGGCATGAACTTAGACTTT---AA
65 GAATGAAGATCATTACTAGAATCCA-TGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAA
* * * * * ** *
2640963 AAAT--TTGG-AAAAAGCTTTTCTTGCAAAACAAAAGCATGAATACAATGTAACCTAAAGAGAAG
129 AAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
*
2641025 ACTATGTTTATGTTGCCTTATCCTGAAAAGAAT---G----G---G-G-----A---TTG---TA
194 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* *
2641068 --T----G--AAACTTTGATTCTATCAAAAACAGTGGAAGGAAAAGTTTTTCTTGTGACACCAAA
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
* * * * * *
2641125 GCATCAATTTCATGTATGCTAGTGAAGGGAATGTGTTTTGGCTTC-GATTCTCGTAAAGAATGGA
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAATGGA
* * * * *
2641189 GATTGTTACGAGAAAC-AAGAATCGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAAG
389 GATTGTTACGAGAATCGATG-CTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGG
* * *
2641253 ACAAAGAAAAGATTTCCAAGGAAA
452 GCAAAGAAAAGATTTCCATGCAAA
* * * * *
2641277 ATAAAATCATAAATATCATTTATCCTATAAGAGGACAATGTGTTTATAGTGCGTAATCACAAAAT
1 AGAAAATCATCAATATCATTTATCCTA-ATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * *
2641342 GAATGAAGATCATTACTAGAATCAAAGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
65 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
* *
2641407 AATGGTGGGAAGAAAGCCTTTCTTGC-AACACGAAAGCATCAATATGATGTATCCTAAAGAAAAG
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAA-ACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* ** * * *
2641471 ACTATGGTTACAGTGCCTAAT-TTGGAAAAGAATGGGGATTAGCT-TGAGTACTCATGTTTGTC-
194 ACTATGTTTATGGTGCCTTATCCT-GAAAAGAATGGGGATTAG-TATGAGTATTCATGTTTGTCT
* * * *
2641533 ---TTAAGAGACAAACTTTGATTCTATAAAAAACGATGGAA-G----GTGTTTCTTGCGACCCCA
257 TATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCA
* * * * *
2641590 AAGCATCAATTTAATGTATCCTAATGAAGGGAATGTG-TTTGTC-TCCCAATC-TCATAAAGAAA
322 AAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGA-AAAGAAT
* * * * **
2641652 GGAGATTTTTACAAGAATTGATGCTTGTCTTATTTAGGGGATGAACTTTGATTTCGAGGAAAATA
386 GGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATA
2641717 GGGCAAAGAAAAGATTTCCATGCAAAA
450 GGGCAAAGAAAAGATTTCCATGC-AAA
* * * *
2641744 AAAAAATCATCAATTTCATTTATCCTAATGAGGGGAATGTGTTTATAGTGCCTAGTCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * * *
2641809 AATGAAAATCATTACTAGAATCCAAGTTTGTCTCATTTGAGACACAAACTTGGACTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * *
2641874 ATAGTGGGAAAAAAGCC-TTCTTGCGGAAC-AAAACATCAATATGATGTATCGTAAAGAGAAAAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * *
2641937 TATTTTTATGGTGCCTTATCTTGAAAAGTATGGGGATTAGTATGAGTATTCGTGTTTGTCTTATT
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * *
2642002 TTAGAGATAGACATTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGAC-CCTAAAG
261 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACC-AAAG
* * * * * * *
2642066 CTTAAATATCTTGTATCCTAATGAAGGGAATGTGTTTTGGC-TCCCATTCTTGTAAAGAATGGAG
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAATGGAG
* * ** * * *
2642130 ATCGTTATGAGAATTTATGCTTGTCTTATTTAAGGGTTGAAGTTTGATTTTAAGGAAAATAGGGC
390 ATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGGC
*
2642195 AAGGAAAAGATTTCCATGCAAA
454 AAAGAAAAGATTTCCATGCAAA
** *
2642217 AGAAAATTGTCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAACCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * * * *
2642282 AGTGAAGATCGTTACTAGAATCCAAGTTTATCT-TATTTGAGGCATGAACTTAGACTTCACAGAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAGGCACGAACTTAGACTTTACAAAA
** * * * * *
2642346 TTTAG-AGGAGAAAAAGCCTTTCTTGCGAAACGAAAGCTTCACTATGATGTTTCCTAAAGAGAAG
130 AATGGTGGGA-AAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* * * * * * *
2642410 GCTATGTATATAGTGCGTTTTCCTTAAAAGAATGGGGATTAGTATGAGTATTGATGTTTGTCTTA
194 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * **
2642475 TTTAAGAGATAAACTTTGAATCTATCACAATTGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
** * * ** ** * *
2642540 GTTTCAATTTCATATATCCTAATGAAGTGAATGTCCTTTGGC-TCTGATTC-TCATAAAGAATGG
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGA-AAAGAATGG
*
2642603 AGATTGTTACGAGAATCGATGCTTGTCTTCTTTAAGGGATGAACTTTGATTTAAAGGAAAATAGG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGG
*
2642668 GCAAAGAAAAGATTTTCATGCAAA
452 GCAAAGAAAAGATTTCCATGCAAA
* * * * * * *
2642692 AGAAAATCATCAATACCATTTATCCTAGTAAGTAGAATGTGTTTATAGTGCCTGACCACAAAATA
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2642757 AAAGAAGATCATCACTAGAATCCATGTTTGTCTCTTTTAAAGCACGAACTTAGAGTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * *
2642822 ACGGTGGGAAAAAAGCCTTTTTTGCGAAACAAAAGCATCAATATGATCTATCCTAATGAGAAGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * *
2642887 AATGTTTATGGGGCCTAATCCGGAAAA-AATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * *
2642951 TATGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAGC
261 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGC
* * * * *
2643016 ATCGATGTCTTGTATCCTAATGAAGAGAATGTGTTTTGGCTTCACATTCTTGAAAAGAACT-GAG
326 ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGAG
* * * * * * *
2643080 ATAGTTATGAGAATCGATTCTTATCTTATTTAAGGTATGAACATCGT-TTTGAAGGAAAATA-GG
390 ATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAAC-T-TTATTTAAAGGAAAATAGGG
*
2643143 CAAAGAAAA-AATTCCAATGCAAA
453 CAAAGAAAAGATTTCC-ATGCAAA
* *
2643166 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCGCAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * *
2643231 AATGAAGATCATTACTAGAATTCAAGTTTGTCT-TATTTGAAGG-ACGAACTTAGACATTACAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTG-AGGCACGAACTTAGACTTTACAAA
* * *
2643294 AAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATATATCCTAACGAAAAG
129 AAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* * * * * * *
2643359 GCCATGTTTATGTTGTCTTATCGTGAAAAGAATGGAGATTAGTACGAGTATTCATGTTTGTCTTA
194 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * *
2643424 TTTAAGAGACAAACTTTGATGCTATCAAAAATGATGGAAGGAAAAGTTTTTCTTGCTG-CACCAA
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGC-GACACCAA
** * * *
2643488 ATTATCAATTTCATGTTTCCTAAATGAAGGGAATGTGTTTTGGCTTCACAAACATGAAAAGAACT
323 AGCATCAATTTCATGTATCCT-AATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-T
** * * * * *
2643553 -GAGACAGTTACGAGAATTGATGCTTGTTTTATTTAAGGGAGGAACTTTGATTTAAAGAAAAACA
386 GGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATA
*
2643617 GGGTAAAGAAAAGATTTCCATGCAAA
450 GGGCAAAGAAAAGATTTCCATGCAAA
* ** * * *
2643643 AGAAAATCATCAATATAATTTATCCTAATGAGGAGAATGCATTTTTATTTCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * * *
2643708 AATGAAAATTATTACTAG-ATCTACGTTTGTCTCATTTGAGGCACGGACTTAGACTTTA-AAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * *
2643771 TTTGG-GGGGAAAAAGCCTTTCTTGCGAAACGAAAGCATGAATACGATGTATCCTAAAGAGAAGA
131 -ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * * *
2643835 CTATGTTTAAGTTACCTTATCTTGAAAA-AATGGGGATT-GTATGGGTATTCATGTTTGTCTTAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * *
2643898 TTAAGAGATAAACTTTGATTCTACCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* *
2643963 CATCAATTTCATGTATCCTAATGAAGGGATTGTGTTTTGGC-TC-CGATTCTTGTAAAA-AATGG
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCAC-AATCTTG-AAAAGAATGG
* * * * * *
2644025 AGATTGTTATGAGAAACAAGGCTTGTCTTATTTAAGAGATGAAATTTGATTTAAAGGAAAATAGG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGG
** * *
2644090 AAAAAGAAAAGATTTCCGTGGAAA
452 GCAAAGAAAAGATTTCCATGCAAA
* * * *
2644114 AGAAAAACATAAATATCATTTATCCTATAAGAGGACAATGTGTTTATAGTGCCTAATCACAAAAT
1 AGAAAATCATCAATATCATTTATCCTA-ATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * *
2644179 AGAA-GAAGATCATTACTAGAAT-CAAGTTTGTCTCATTTGAGGCACGAACTTAGATTTTACAAA
65 -GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAA
* * * * *
2644242 AAATGGTAGGAAAAAAGCATTTCTTGCAAAACGAAAGCATCAATATGATGTATCCAAAAGAGAAA
129 AAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
** * * * *
2644307 ACTATGTTTACAGTGCCTAATTC-GAAAAAGATTGGGGATTAGCT-TGAGTACTCATGTTTGTC-
194 ACTATGTTTATGGTGCCTTATCCTG-AAAAGAATGGGGATTAG-TATGAGTATTCATGTTTGTCT
* * * * * * *
2644369 ---CTAAGAGACAAACTTTGATTCTCTAAAAAATGGTGGAAGAAAAAGTGTTTCTTGCGACCCCA
257 TATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCA
* * * * * *
2644431 AAGCATCAATTTAATGTATCCTAATAAAGGGAATGTG-TTTGTC-TCCCAATC-TCATAAAGAAA
322 AAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGA-AAAGAAT
* * *
2644493 GGAGATTTTTACGAGAATTGATGCTTGTCTTATTTACGGGATGAACTTTGATTTTAAA-GAAAAT
386 GGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-A-TTTAAAGGAAAAT
* *
2644557 AGGCCAAAGAAAAGATTTCCATTCAAAA
449 AGGGCAAAGAAAAGATTTCCATGC-AAA
* * *
2644585 AAAAAATCATCAATTTCATTTATCCTAATGAGGGGAATGTGTTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2644650 AATGAAAATCATTACTAGAATCCAGGTTTGTCTCATTTGAGGCATGAACTTAGAGTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * *
2644715 A-GGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAACATCAATATGATGTATTCTAATGAGAAGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* ** * *
2644779 AATGTTTATGGCACCTAATCC-GAAAAAGAATGGGGATTAGCATGAGTATTCATGTTTGTCTTAT
196 TATGTTTATGGTGCCTTATCCTG-AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * *
2644843 TTAAGAGACAAACTTTGATTCCATAAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACACCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * ** * *
2644908 CCTCAATTTCATGTATCCTAATGAAGGGATTGTGTTTTGGC-TCGGATTCTCGTAAAA-AATGGA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTG-AAAAGAATGGA
* * * *
2644971 GATTGTTATGAGAATCGATGTTTGTCTTATTTAAGGGATGGACTTCGATTTAAAGGAAAATAGGG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTT-TATTTAAAGGAAAATAGGG
* **
2645036 CAAAGAAAAAATTTCCATATAAA
453 CAAAGAAAAGATTTCCATGCAAA
* * *
2645059 AGAAAATCGTCAATATCATTTATCCTAATGAGGAGAATGTGCTTATAGTGCCTAACCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* *
2645124 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGGACTTAGACTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * *
2645189 ATGGTGGGAAAAAAGCCTTTCTTGTGAAACGAAACCATCAATATGACGTATCCTAATGAGAAGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * ** *
2645254 TATGTTTATGTTGCCTTATCGTGAAAAGAATGGGGATTAGTATGAGTATTTGTATTTG-CTGTAT
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCT-TAT
* * * * * *
2645318 CTAAGAGACAAACTTTGATTTTATCAAAAATGGTGGAAGGAAAAGTTTTTCGTGTGACATCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * * * * *
2645383 CATCAATGTCATGTATCGTAAAGAAGGGAAAGCGTTTTGGCTTTACAATCTTGAAAA-AACT-AA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGA
* * * * *
2645446 GATAGTTACGAGAATCGATTCTTGTCTTATTTAAGGTATGAACATTGTTCTAAAGGAAAATA-GG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTATT-TAAAGGAAAATAGGG
*
2645510 CAAAGAAAAGATTTCCATGTAAA
453 CAAAGAAAAGATTTCCATGCAAA
* *
2645533 ACAAAATCATCAATATCATTTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * * * *
2645598 AATCAAGATCATTACCAAAATCCAAGTTTGTCTCATTTGAGGCTCGAACTTAGACTTTACAAAAT
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * * * * *
2645663 TTGGTGAGAAAAAAGCGTTTCATGCAAAACGAAAGCTTCAATATGATGTATCCTAAAGAGCAGGC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* *
2645728 TATGTTTGTAGTGCCTTAT-CTAGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
196 TATGTTTATGGTGCCTTATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * *
2645792 TTAAGAGGCAAACTTTGATTCTATCAAAAATGGTGGAAGGAAATAGTTTTTCTTGCAACATCAAA
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAA-AGTTTTTCTTGCGACACCAAA
* * * * * *
2645857 CCATCAATGTCATGTATCCTAATGAAGGGAATTTGTTATGGCTTCACAATCTTGAAATGAACT-A
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGG
*** *
2645921 AGACAATTACGAGAATCGATGCTTGTCTTATTTATGGGATGAACTTTGATTTAAAGGAAAATAGG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGG
* *
2645986 GGAAAGAAAAGATTTGCATGCAAA
452 GCAAAGAAAAGATTTCCATGCAAA
* * *
2646010 AGAAAATCATCAATATCATTTATCCTAAGGAGGTGAATGTATTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * **
2646075 AATGAAGATCATTACTAGAGTCCATGTTTGTCTCTTTTGAGGCACAAACTTAGACTTTA-TGAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * * * * *
2646139 ATGGTGGGAAAAAAGGCTTTCATGTGAAACAAAAGCATTAATATGATGTGTCCTAATGAGAAGGC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * *
2646204 TATGTTTATGTTGTCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCACGTTTGTC-----
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * ** *
2646264 T----GATAATCTTTGATTCTATCAAAAACGACGGAAGGAAAAGTTTTTCTTGCGACATCAAAGC
261 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGC
*** * *
2646325 ATCAACACCATGAATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAATGAACT-GAG
326 ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGAG
** * * * * *
2646389 ACAGTGACGAGAATCGATGCTTGTCTTATTTAAGAGATGAGCTTTGTTTTAAAGGAAAATAGGGG
390 ATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGGC
* *
2646454 AAAGAAAATATTTGCATGCAAA
454 AAAGAAAAGATTTCCATGCAAA
2646476 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2646541 AATGAAGATCACTACTAGAATCCATGTTTGTCTCTTTTAAGGCACAAACTTAGACTTTGCAAAAG
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * *
2646606 ATGGTGGGAAAAAAACCTTTCTTGTGAAATGAAAGCATCAATATGATGTATCCTAATGAGAAGGC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * * * *
2646671 TATGTTTCTGTTGTCTTATCGTGGAAAGAATGAGGATTAGTATGAGTATTCATGTTTG-----TT
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * *
2646731 T----GATAATCTCTGATTCTATC-AAAA------AAGGAAAAGTTTTTCTTGCGATACACAAAG
261 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACAC-CAAAG
* * * * * * *
2646785 CATCAATTTCACGTATCCTAATGAAGGGAATGTGTTTGGGCTTC-GATTCTCGTAAAA-TAGGGA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTG-AAAAGAATGGA
* * * * *
2646848 GATTGTTGCAAGAAACGGTGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAAGAGGG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGG
* * *
2646913 CTAAGAAAATATTTCCATG-GAA
453 CAAAGAAAAGATTTCCATGCAAA
* ** *
2646935 A-AAAATCATAAATATCATTTATCCTGTTGAGGACAATGTGTTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* ** * *
2646999 AATGAAGATCATTACTAGAATCCAAGTTTGTCTCACTTGAGGCACAAACTTAGACTTTATAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
*
2647064 ATGGTGGGAAAAAAGCCTTTCTTGCAAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
** * * * * *
2647129 TATGTTTACAGTGCCTAATTCAGAAAAGAATGAGGATTAGCT-TGAGTACTCATGTTTGTC----
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAG-TATGAGTATTCATGTTTGTCTTAT
* * * * * * *
2647189 TTAAGGGACAAACTTTGATTCTATAAAAAATGATGGAAGAAAAAGTGTTTCTTGCGACCCCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * *
2647254 CATCAATTTAATGTATCCTAATG-AGGAGAATGTG-TTTGTC-TCCCAATCTT-ATAAAGAAAGG
325 CATCAATTTCATGTATCCTAATGAAGG-GAATGTGTTTTGGCTTCACAATCTTGA-AAAGAATGG
* * * *
2647315 AGATTGTTACGAGAATTGATGCTTGTCTTATTTAGGGGATGAACTTCGATTTTAAGGAAAATAGG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTT-TATTTAAAGGAAAATAGG
* *
2647380 GCAAAGAAAAGATTTCTACGCAAA
452 GCAAAGAAAAGATTTCCATGCAAA
* * *
2647404 A-AGAAATCATCAATTTCATTTATCCTAATGAGGGGAACGTGTTTATAGTGCCTAATCACAAAAT
1 AGA-AAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * *
2647468 GAATGAAGATCATTACTAGAATCCATGTTTGTCTTTTTTGAGGTACAAACTTAGACTTTATAAAA
65 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
* * * *
2647533 AATGTTGGGAAAAAAGCCTTTCTTGC-AGA-GCAAAGCATCAATATGATGTATCATAAAGAGAAA
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACG-AAAGCATCAATATGATGTATCCTAAAGAGAAG
* * * * *
2647596 ACTATTTTTATGGTGCCTTAT-CTGGAAAAAAATAGGGATTAGCT-TAAGTATTCATGTTCGTCT
194 ACTATGTTTATGGTGCCTTATCCT-GAAAAGAATGGGGATTAG-TATGAGTATTCATGTTTGTCT
* * ** *
2647659 TATTTAAGAGACAAACATTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTTTTATGACCCCA
257 TATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCA
* * * * * *
2647724 AAGCATCAATTTCTTGTATCCTAATGAAGGGCATGTGTTTTGGC-TCCCATTCTCGTAAAGAATG
322 AAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAATG
* * ** * * *
2647788 AAGATTGTTATGAGAATTTATGCTTGTCTTATTTAAGGGTTGAACTTTGATTTTAAGGAAAATTG
387 GAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAG
*
2647853 GGCAAAGAAAAGATTTCTATGCAAA
451 GGCAAAGAAAAGATTTCCATGCAAA
* * *
2647878 AAAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAATGCCTAACCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * * *
2647943 AATGAAGATCTTTACTAGAATCCAAGTTTATCT-TATTTGAGGCATGAACTTAGACTTTATAGAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAGGCACGAACTTAGACTTTACAAAA
** * * * * *
2648007 TTTGGT-GGAGAAAAAGCCTTTCTTGCAAAATGAAAGCTTCAATATGATGTTTTCTAAAGAGAAG
130 AATGGTGGGA-AAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* ** * *
2648071 GCTATGTTTATAATGCCTT-TCCTTAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGCCTTA
194 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * * * *
2648135 TTTAAGAGACAAACTTTGAATCTATCACAAATGGTGGAAAGAAAAGTTTTTCTTGTGATACCAAA
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
* * *
2648200 GCATCAATTTCATGTATCCTAAAGAAGGGAATGTGTTTTGGC-TC-CGAT-TCTCATAAAGAATG
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCT-TGA-AAAGAATG
* * * *
2648262 GAGATTGTTACGAGAAAC-AAGAATCGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA
387 GAGATTGTTACGAGAATCGATG-CTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATA
* * *
2648326 AGGCAAAGAAAAGATTTCCAAGGAAA
450 GGGCAAAGAAAAGATTTCCATGCAAA
* * * * *
2648352 AGAAAATCATAAATATCATTTATCCTATAAGAGGACAATGTGTTTATAGTGCGTAATTACAAAAT
1 AGAAAATCATCAATATCATTTATCCTA-ATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * *
2648417 GAATGAAGATCATTACTAGAATCAAAGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAA
65 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
* *
2648482 AATGGTGGGAAGAAAGCCTTTCTTGC-AACACGAAAGCATCAATATGATGTATCCTAAAGAAAAG
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAA-ACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* ** * * *
2648546 ACTATGGTTACAGTGCCTAAT-TTGGAAAAGAATGGGGATTAGCT-TGAGTACTCATGTTTGTC-
194 ACTATGTTTATGGTGCCTTATCCT-GAAAAGAATGGGGATTAG-TATGAGTATTCATGTTTGTCT
* * * *
2648608 ---TTAAGAGACAAACTTTGATTCTATAAAAAACGATGGAA-G----GTGTTTCTTGCGACCCCA
257 TATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCA
* * * * *
2648665 AAGCATCAATTTAATGTATCCTAATGAAGGGAATGTG-TTTGTC-TCCCAATC-TCATAAAGAAA
322 AAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGA-AAAGAAT
* * * * **
2648727 GGAGATTTTTACAAGAATTGATGCTTGTCTTATTTAGGGGATGAACTTTGATTTCGAGGAAAATA
386 GGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATA
2648792 GGGCAAAGAAAAGATTTCCATGCAAAAAA
450 GGGCAAAGAAAAGATTTCCATGC---AAA
* * * *
2648821 AAAAAATCATCAATTTCATTTATCCTAATGAGGGGAATGTGTTTATAGTGCCTAGTCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2648886 AATGAAAATCATTACTAGAATCCATGTTTGTCTCATTTGAGACACAAACTTGGACTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * *
2648951 ATAGTGGGAAAAAAGCC-TTCTTGCGGAAC-AAAACATCAATATGATGTATCGTAAAGAGAAAAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * *
2649014 TATTTTTATGGTGCCTTATCTTGAAAAGTATGGGGATTAGTATGAGTATTCGTGTTTGTCTTATT
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
* * * *
2649079 TAAGAGACAGACATTGATTCTATTAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACCCCAAAGC
261 TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGC
* * * * * * *
2649144 TTAAATTTCTTGTATCCTAATGAAGGGAATGTGTTTTGGC-TCCCATTCTCGTAAAGAATGGAGA
326 ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAATGGAGA
* ** * * *
2649208 TTGTTATGAGAATTTATGCTTGTCTTATTTAAGGGTTGAAGTTTGATTTTAAGGAAAATAGGGCA
391 TTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGGCA
*
2649273 AGGAAAAGATTTCCATGCAAA
455 AAGAAAAGATTTCCATGCAAA
** *
2649294 AGAAAATTGTCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAACCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * * * * *
2649359 AGTGAAGATCGTTACTAGAATCCAAGTTTATCT-TATTTGAAGCATGAACTTAGACTTCACAGAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAGGCACGAACTTAGACTTTACAAAA
** * * * * *
2649423 TTTAG-AGGAGAAAAAGCCTTTCTTGCGAAACGAAAGCTTCACTATGATGTTTCCTAAAGAGAAG
130 AATGGTGGGA-AAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* * * * * *
2649487 GCTATGTATATAGTGCCTTTTCCTTAAAAGAATGGGGATTAGTATGAGTATTGATGTTTGTCTTA
194 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * **
2649552 TTTAAGAGACAAACTTTGAATCTATCACAATTGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
** * * * * * *
2649617 GTTTCAATTTCATATATCCTAATGAAGTGAATGTGTTTTGGC-TC-CGATTCTCGTATAGAATGG
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCAC-AATCTTGAAAAGAATGG
* *
2649680 AGATTGTTACGAGAATCGATGCTTGTCTTCTTTAAGGGATGAACTTTGATTTAAAGGAATATAGG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGG
* *
2649745 GCAAAGAAAAGATTTTCATACAAA
452 GCAAAGAAAAGATTTCCATGCAAA
* * * * * *
2649769 AGAAAATCATCAATATCATTTATCCTAGTAAGTAGAATGTGTTTATAGTGCCTGACCACAAAATA
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * * *
2649834 AAAGAAGATCATCACTAGAATCCATGTTTGTCTTTTTTAAAGCACGAACTTAGAGTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * *
2649899 ACGGTGGGAAAAAAGCCTTTTTTGCGAAATGAAAGCATCAATATGATGTATCCTAATGAGAAGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * *
2649964 AATGTTTTATGGGGCCTAATCCGGAAAA-AATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
196 TATG-TTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* *
2650028 TTATGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * * * *
2650093 CATCGATGTCTTGTATCCTAATGAAGGGAATGTATTTTGGCTTCACATTCTTCAAAAGAACT-GA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGA
* * * * * *
2650157 GATAGTTATGAGAATCGATTCTTATCTTATTTAAGGTATGAACATTGT-TTTGAAGGAAAATA-G
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAAC-TT-TATTTAAAGGAAAATAGG
*
2650220 GCAAAGAAAA-AATTCCAATGCAAA
452 GCAAAGAAAAGATTTCC-ATGCAAA
* *
2650244 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCGCAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2650309 AATGAAGATCATTACTAGAATTCAAGTTTGTCT-TATTTGAAGCACGGACTTAGACATTACAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAGGCACGAACTTAGACTTTACAAAA
* * * *
2650373 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATATATCCTAATGAAAAGG
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * *
2650438 CTATGTTTATGTTGTCTTATCGTGAAAAGAATGGAGATTAGTATGAGTATTCATGTTTGTCTTAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * *
2650503 TTAAGAGACAAACTTTGATGCTATCAAAAATGATGGAAGGAAAAGTTTTTCTTGCTG-CACCAAA
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGC-GACACCAAA
** * * *
2650567 TTATCAATTTCATGTATCCTAAATGAAGGGAATGTGTTTTGGCTTCACAAACATGAAAAGAATTG
324 GCATCAATTTCATGTATCCT-AATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAATGG
** * * * *
2650632 AGACAGTTACGAGAATTGATGCTTGTTTTATTTAAGGGAGGAACTTTGATTTAAAGAAAAATAGG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGG
** *
2650697 ATAAAGAAAATATTTCCATGCAAA
452 GCAAAGAAAAGATTTCCATGCAAA
* ** * * *
2650721 AGAAAATCATCAATATAATTTATCCTAATGAGGAGAATGCATTTTTATTTCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2650786 AATGAAAATTATTACTAG-ATCTACGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA-AAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * *
2650849 TTTGGGGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATGAATACGATGTATCCTAAAGAGAAGA
131 -ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * * *
2650914 CTATGTTTAAGTTACCTTATCTTGAAAA-AATGGGGATT-GTATGGGTATTCATGTTTGTCTTAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * *
2650977 TTAAGAGATAAACTTTGATTCTACCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* *
2651042 CATCAATTTCATGTATCCTAATGAAGGGATTGTGTTTTGGC-TC-CGATTCTTGTAAAA-AATGG
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCAC-AATCTTG-AAAAGAATGG
* * * * *
2651104 AGATTGTTACGAGAAACAAGGCTTGTCTTATTTAAGAGATGAAATTTGATTTAAAGGAAAATAGG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGG
** * *
2651169 AAAAAGAAAAGATTTCCGTGGAAA
452 GCAAAGAAAAGATTTCCATGCAAA
* * * * *
2651193 AGAAAAACATAAATATCATTTATCCTATAAGAGGACAATGCGTTTATAGTGCCTAATCACAAAAT
1 AGAAAATCATCAATATCATTTATCCTA-ATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * *
2651258 --A-GAAGATCATTACTAGAATCCAAGTTTGTCTCATTTGAGGCACGAACTTAGATTTTACAAAA
65 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
* * * * * * *
2651320 AATGGTAGGAAAAAAGCATTTCTTGCAAAATGAAAGCATCAGTATGATGTATCCAAAAGAGAAAA
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
** * * * * *
2651385 CTATGTTTACAGTGCCTAATTCGGAAAAGATTGGGGATTAGCT-TGAGTACTCATGTTTGTC---
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAG-TATGAGTATTCATGTTTGTCTTA
* * * * *
2651446 -CTAAGAGACAAACTTTGATTCTATAAAAAATGGTGGAA-GAAAAGTGTTTCTTGCGACCCCAAA
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
* * * * *
2651509 GCATCAATTTAATGTATCCTAATAAAGGGAATGTG-TTTGGC-TCCCAATC-TCATAAAGAAAGG
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGA-AAAGAATGG
* * * *
2651571 AGATTTTTACGAGAATTGATGCTTGTCTTATTTACGGGATGAACTTTGATTTTAAA-AAAAATAG
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-A-TTTAAAGGAAAATAG
* *
2651635 GCCAAAGAAAAGATTTCCATTCAAAA
451 GGCAAAGAAAAGATTTCCATGC-AAA
* * *
2651661 AAAAAATCATCAATTTCATTTATCCTAATGAGGGGAATGTGTTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * *
2651726 AATGAAAATCATTACTAGAATCCAGGTTTGTCTCATTTGAGGCATGAACTTAGACTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * *
2651791 A-GGTGGGAAAAAAGCCTTTCTTGCAAAATGAAAACATCAATATGATGTATTCTAATGAGAAGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * *
2651855 AATGTTTATGGTGCCTAAT-CTGAAAAAGAATAGGGATTAGCATGAGTATTCATGTTTGTCTTAT
196 TATGTTTATGGTGCCTTATCCTG-AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * *
2651919 TTAAGAG--AAACTTTGATTCCATAAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACACCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * ** * *
2651982 CCTCAATTTCATGTATCCTAATGAAGGGATTGTGTTTTGGC-TCGGATTCTCGTAAAA-AATGGA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTG-AAAAGAATGGA
* * *
2652045 GATTGTTATGAGAATCGATGCTTGTCTTATTTAAGGGATGGACTTCAATTTAAAGGAAAATAGGG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTT-TATTTAAAGGAAAATAGGG
**
2652110 CAAAGAAAAGATTTCCATATAAA
453 CAAAGAAAAGATTTCCATGCAAA
* * *
2652133 AGAAAATCGTCAATATCATTTATCCTAATGAGGAGAATGTGCTTATAGTGCCTAACCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
*
2652198 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACG-ACTTAGACTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * * *
2652262 ATGGTGGGAAAAAAGCCTTTCTTGTGAAACGAAACCATCAATATGACGTATCCTAATGAGAGGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* *
2652327 TATGTTTATGTTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATATTTG-CTGTAT
196 TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCT-TAT
* * * * * *
2652391 CTAAGAGACAAACTTTGATTCTATAAAAAATGGTGGAAGGAAAAGTTTTTCGTGTGACATCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * * * *
2652456 CATCAATGTCATGTATCGTAAAGAAGGGAAAGTGTTTTGGCTTTACAATCTTGAAAAGAACT-AA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGA
* * * * * * *
2652520 GATAGTTATGAGAATCGATTCTTGTCTTATTTAAGGTATGAACATTGTTCTATAGGAAAATA-GG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTATT-TAAAGGAAAATAGGG
*
2652584 CAAAGAAAAGATTTCCATGTAAA
453 CAAAGAAAAGATTTCCATGCAAA
* *
2652607 ACAAAATCATCAATATCATTTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* *
2652672 AATCAAGATCATTACTAGAATCCATGTTTGTCT-TATTTGAGGCATGAACTTAGACTTTACAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAGGCACGAACTTAGACTTTACAAAA
** *
2652736 AATGGTGGGAAAAAAGCCTTTCTTGCGAAAAAAAAGCTTCAATATGATGTATCCTAAAGAGAAGA
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * *
2652801 CTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATTTTTATCTTAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * * * * **
2652866 TTAAGAGATAAACTTTGACTATATCAAGAAGGGTGGAAGGAAAAGTTTTTCTTGCAACATTAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * * *
2652931 CATCAGTTTCATATATCCTAATGAAGGGAAAGAGTTTTGGCTTCACAATCTTGAAAA-AACT-AA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGA
** * * *
2652994 GACAGTTACGAGAATCAATCCTTGTCTT-TTTAAGGGATGAACTTTGAATTAAAGGAAAATAGGG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGG
* * **
2653058 CAAAGAAAAGATTTCAAAGTGAA
453 CAAAGAAAAGATTTCCATGCAAA
* *
2653081 AGAAAATCATCAATATCATTTATCCTACA-AAGGAGAATGTGTTTATAGTGCCTAATCATAAAAT
1 AGAAAATCATCAATATCATTTATCCTA-ATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * * * *
2653145 GAAAGAAGATCATTACTAGAATCCAAGTTTATCTCATTTGAGGCATGAACCTAGACTTTACAAAA
65 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
* * * * *
2653210 AATGGTTGGAAAAAAGCCTTCCATGCGAAACGAAAGCTTCAATATGATGTATCCTAAAGAGAAGT
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * * *
2653275 CTACGTTTATAGTGCCTTATCTTGAAAAGAATTGGGATTAGTATGAGTATTCATGTTTGTCATAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* *
2653340 TTAGGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* ** * * *
2653405 CATCAATTTCATGTATCCTAGTGAAGGGAATGTGTTTATGGCTT-GGATTCTTGTAAAGAGTGGA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTT-TGGCTTCACAATCTTGAAAAGAATGGA
* * * *
2653469 GATTGTTATGAGAATCGATACTTGTCTTATTTAAGAGATGAACTTTGATTTAAAGGAAAAAAGGG
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAGGG
* *
2653534 CAAAGAAAAAATATCCATGCAAA
453 CAAAGAAAAGATTTCCATGCAAA
* * *
2653557 AGAAAATCATCAATATCATTTATCTTAATTAGGAGAATGTGTTTATAGTGCCTAACCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * *
2653622 AATGAAGATCATTCCTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAATAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * * **
2653687 ATTGTGGGAAAAAAGCCTTTCTTGTGAAACGAAAGCTTCAATATGATGTATCCTAATTAGAAGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * *
2653752 TATGTTTA-GGTTGCCTTATCCTAAAAAGAATGAGGATTACTATGAGTATTCATATTTGTCTTAT
196 TATGTTTATGG-TGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* ** * * *
2653816 TTAAGAGACAAACATTGATTCTATCAAAAATAG-AGAAGGAAAAGTTTTTCATGCGACA-TAAA-
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
*
2653878 -A--AA----A-G---------G-A--GAATGTGCTTTGGCTTCACAATCTTGAAAAGAACT-GA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGGA
* * * *
2653922 GATAGTTACGAGAATCGATTCTTGCCTTATTTAAGGTATGAACATTGT-TTTAAAGGAAAATA-G
389 GATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAAC-TT-TATTTAAAGGAAAATAGG
2653985 GCAAAGAAAAGATTTCCATGCAAA
452 GCAAAGAAAAGATTTCCATGCAAA
* * * *
2654009 GGAAAATCATCATTATCATTTATCCTAATGA--AGAATGTATTTATAGTGCCGAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * *
2654072 AATCAAGATCATTACTAGAATCCATGTTTATCTTTTTTGAGGCACGAACTTAGACTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
* * ** * * **
2654137 ATAGTGTGAAAAAAGCCTTTCTTGCGAAAAAAAAGCTTCAATGTGACATATCCTAAAGAGAAGAC
131 ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
* * * * * *
2654202 TATGTTTCTTGTGCCTTAT-CTGGAAAAGCATGGGGATTTGAATGAGTATTCAAGTTTGTCTTAT
196 TATGTTTATGGTGCCTTATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * * *
2654266 TTAAGAGACAAATTTTGATTATATCAAGAACGGAGGAAGGAAAAGTTTTTCTTGCGACATCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * *
2654331 CATCAATTTCATATATCCTAATGAAGGGAATGAGTTTTGGCTTCACAATCTTGAAAAGAATTGAG
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAATGGAG
** * * * * *
2654396 ACAGTTACAAGAATCGATACTTGTCTTACTTAAGGGATGAACTTTGTTTCGAAGGAAAATAGGGC
390 ATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTATTT-AAAGGAAAATAGGGC
* *
2654461 AAAGAAAAGATTTTCATACAAA
454 AAAGAAAAGATTTCCATGCAAA
* * * * * *
2654483 TGCAAATCATCAATATCTTTTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATAATAAAAC
1 AGAAAATCATCAATATC-ATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * * *** * * *
2654548 GAATAAAGATCATTACTAAAATCCAAGTTTGTCTCATTTGAGGTGTGAACTTTGACATTACAAAC
65 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
** * * *
2654613 GTTGGTGGGAAAAAAGCCTTTTTTGCGAAACGAAAGCTTCAATATGATGTGTCCTAAAGAGAAGA
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * *
2654678 CTATGTTTATAGTGCCTTACCCTGAAAAGAATGGGGATTAGTATGAGTATCCATTTTTGTCTTAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * *
2654743 TTAAGAGACAAACTTTCATTCTGTCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * * *
2654808 CATTAATTTCATGTATCCTAATGAAGGGAATTTGCTTTTGGC-TC-CGAT-TCTCATAAAGAATA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTG-TTTTGGCTTCACAATCT-TGA-AAAGAATG
** *
2654870 GAGATTGTTATAAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAG
387 GAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAG
*
2654935 GGCAAAGAAAAGATTTTCATGCAAA
451 GGCAAAGAAAAGATTTCCATGCAAA
* * *
2654960 AGAAAATCATAAATATCATTTATCCCT-ATGAGGAGAATGTGTTTATAATACCTAATCACAAAAT
1 AGAAAATCATCAATATCATTTAT-CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * *
2655024 GAATGAAGAGCAATA-TGGGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAA
65 GAATGAAGATCATTACT-AGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAA
* * * * * *
2655088 AAATTGTTGGCAAAAAGCCTTTCCTGCGAAATGAAAGCTTCAATATGATGTATCCTAAAGAGAAG
129 AAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* * * *
2655153 ACTATGTTTATAGTGCCTTAT-CTGGAAAAGCATGAGGATTTGTATGAGTATTCATGTTTGTCTT
194 ACTATGTTTATGGTGCCTTATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* * * *
2655217 ATTTAAGAGACAAACTTTGATTATATCAAGAACGGAGGACA-GAAAAGTTTTTCTTGCGACATCA
258 ATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGA-AGGAAAAGTTTTTCTTGCGACACCA
* * *
2655281 AAGCATCAATTTCATATATCCTAATGAAGGGAATGAGTTTTGGCTTCACAATCTTGAAAAGAATT
322 AAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAATG
** * * * *
2655346 GAGACAGTTACGAGAATCGATACTTGTCTTACTTAAGGGATGAACTTTGTTTCGAAGGAAAATAG
387 GAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTATTT-AAAGGAAAATAG
* *
2655411 GGCAAAGAAAAGATTTTCATACAAA
451 GGCAAAGAAAAGATTTCCATGCAAA
* * * * * *
2655436 TGCAAATCATCAATATCTTTTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATAATAAAAC
1 AGAAAATCATCAATATC-ATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * * *** * * *
2655501 GAATAAAGATCATTACTAAAATCCAAGTTTGTCTCATTTGAGGTGTGAACTTTGACATTACAAAC
65 GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
** * * *
2655566 GTTGGTGGGAAAAAAGCCTTTTTTGCGAAACGAAAGCTTCAATATGATGTGTCCTAAAGAGAAGA
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * *
2655631 CTATGTTTATAGTGCCTTACCCTGAAAAGAATGGGGATTAGTATGAGTATCCATTTTTGTCTTAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* * * *
2655696 TTAAGAGACAAACTTTCATTCTGTCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACATCAAAG
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAG
* * * * *
2655761 CATTAATTTCATGTATCCTAATGAAGGGAATTTGCTTTTGGC-TC-CGAT-TCTCATAAAGAATA
325 CATCAATTTCATGTATCCTAATGAAGGGAATGTG-TTTTGGCTTCACAATCT-TGA-AAAGAATG
** *
2655823 GAGATTGTTATAAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTTAAGGAAAATAG
387 GAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAATAG
*
2655888 GGCAAAGAAAAGATTTTCATGCAAA
451 GGCAAAGAAAAGATTTCCATGCAAA
* * *
2655913 AGAAAATCATAAATATCATTTATCCCT-ATGAGGAGAATGTGTTTATAATACCTAATCACAAAAT
1 AGAAAATCATCAATATCATTTAT-CCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAAT
* * * *
2655977 GAATGAAGAGCAATA-TGGGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAA
65 GAATGAAGATCATTACT-AGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAA
* * * * * *
2656041 AAATTGTTGGCAAAAAGCCTTTCCTGCGAAATGAAAGCTTCAATATGATGTATCCTAAAGAGAAG
129 AAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* * * *
2656106 ACTATGTTTATAGTGCCTTAT-CTGGAAAAGCATGAGGATTTGTATGAGTATTCATGTTTGTCTT
194 ACTATGTTTATGGTGCCTTATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTT
* * * *
2656170 ATTTAAGAGACAAACTTTGATTATATCAAGAACGGAGGACA-GAAAAGTTTTTCTTGCGACATCA
258 ATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGA-AGGAAAAGTTTTTCTTGCGACACCA
* *
2656234 AAGCATCAATTTCATATATCCTAATGAAGGGAATGAGTTTTGGCTTCACAATCTTGAAAAGAACT
322 AAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-T
* * * * *
2656299 -GAGATAT-TTACGAGAATAGATGCTTGTCTTACTTAAAGGAAGAACTTTGATTTGAAGGAAAAT
386 GGAGAT-TGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTT-ATTTAAAGGAAAAT
2656362 AGGGCAAAGAAAAGATTTCCATGCAAA
449 AGGGCAAAGAAAAGATTTCCATGCAAA
* * * *
2656389 TGAAAATCATCAATATCTTTTATCCTAATGAGGAGAATGTGTTTATAGTGCCAAATTACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
2656454 AATGAAGATCATTACTTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
66 AATGAAGATCATTAC-TAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAA
* * *
2656519 AATGATAGGAAAAAAGCCTTTCTGATG-G-AAC-AAACGCATCAATATGATGTATCCTAATGAGA
130 AATGGTGGGAAAAAAGCCTTTCT--TGCGAAACGAAA-GCATCAATATGATGTATCCTAAAGAGA
* * *
2656581 AGACTATGTTTGTAGTGCCTTATCTTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCT
192 AGACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCT
* * * * * **
2656646 TATTTAAGACACAAACTTTGATTATATTAAGAACGATGGAAGGAAAAGTTTTTCTTGCGACATTA
257 TATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCA
* * * * *
2656711 AAGCATTAACTTCATATATCCTAATGAGGGGAATGAGTTTTGGCTTCACAATCTTGAAAAGAACT
322 AAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-T
* * * * **
2656776 -GAGATAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATAAACGTTGAATTAAACAAAAATA
386 GGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAAC-TTTATTTAAAGGAAAATA
* *
2656840 GGGCAAAGAAAAGATTTTCGTGCAAA
450 GGGCAAAGAAAAGATTTCCATGCAAA
* * * *
2656866 AGGAAATCATCAATATCATTTATCTTTATGAGGCA-AATGTCTTTATA---CCTAATCACAAAAT
1 AGAAAATCATCAATATCATTTATCCTAATGAGG-AGAATGTGTTTATAGTGCCTAATCACAAAAT
* * *
2656927 GATTGAAGATCATTA-TGGGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAA
65 GAATGAAGATCATTACT-AGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAA
* * *
2656991 AAATTGTGGGAAAAAAGCCTTTCTTGTGAAACGAAAGCATCAATATGATGTATCCTAATGAGAAG
129 AAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAG
* * * * *
2657056 ACTATGTTTATGCTACTTTATCCTGAAAAGAACGGGGATTAGTATGAGTATTCATATTTGTCTTA
194 ACTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTA
* * * * *
2657121 TTTAAAAGACAAACTTTGATTCTATCAAAAACAGTGGAAGGAAAAGTTTTTCGTGCAACATCAAA
259 TTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAA
** * * **
2657186 GCATCAAAGTCATGTATCTTAAAGAAGGGAATGCATTTTGGCTTCACAATCTTGAAAAGAACT-G
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAA-TGG
* * * * * *
2657250 AGATAGTTATGAGAATCGATTCTTGTCTTATTTAAGGCATGAGCATTGT-TTTAAAAGAAAATA-
388 AGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAAC-TT-TATTTAAAGGAAAATAG
2657313 GGCAAAGAAAAGATTTCCATGCAAA
451 GGCAAAGAAAAGATTTCCATGCAAA
* * *
2657338 GGAAAATCATCAATATCATTTATCCTAATGAGGAGCATGTGTTTATAGTGCCGAATCACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
*
2657403 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCATGAACTTAGACTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTAC-AAAA
* ** * * *
2657468 AATGGTGTGAAAAAAGCCTTTCTTGCGAAACGAAAGTTTCAATAAGATGTTTCCGAAAGAGAAGA
130 AATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* * * * *
2657533 CTATGTTTGTAGTGCCTTATCCTGAAAAGAATAGGGATTAGTATAAGTATTCATGTTTATCTTAT
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTAT
* *
2657598 TTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCAAC-CCGAAA
260 TTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACC-AAA
* * * * *
2657662 ACATCAATTTCATGTATCCTAATGAAGGAAATGTGTTTT--CAGTCTA-ATTCTCT-TAAAGAAT
324 GCATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGC-TTC-ACAATCT-TGAAAAGAAT
* *
2657723 GGAGATTGTTACGAGAATCGATGCTTG-CATTATTTACGGGATGAACTTTGATTTAACGGAAAAT
386 GGAGATTGTTACGAGAATCGATGCTTGTC-TTATTTAAGGGATGAACTTT-ATTTAAAGGAAAAT
2657787 AGGGCAAAGAAAAGATTTCCATGCAAA
449 AGGGCAAAGAAAAGATTTCCATGCAAA
* * *
2657814 GGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCGAATAACAAAATG
1 AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
* * * * *
2657879 AATCAAGATAATTAGTAGAATCCATGTTTGTTTCTTTTGAGGCACGAACTTACACTTTACAAAAA
66 AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
** * * * *
2657944 ATGGTCAGAAAAAAGCCTTT-TTCGTGAAATGAAAGCATCAATACGATGTATCCTAAAGGGAAGA
131 ATGGTGGGAAAAAAGCCTTTCTT-GCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGA
* *
2658008 CTATGTTTATGTTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGT-TTGCATTTTTGTCTTA
195 CTATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATT-CATGTTTGTCTTA
2658072 TTTAAGAGA
259 TTTAAGAGA
2658081 ACACTATAAA
Statistics
Matches: 22891, Mismatches: 3221, Indels: 1132
0.84 0.12 0.04
Matches are distributed among these distances:
436 3 0.00
437 106 0.00
438 142 0.01
439 12 0.00
440 21 0.00
443 6 0.00
444 1 0.00
445 6 0.00
446 70 0.00
449 6 0.00
450 219 0.01
451 24 0.00
452 60 0.00
453 73 0.00
454 4 0.00
455 2 0.00
456 4 0.00
457 1 0.00
458 439 0.02
459 15 0.00
460 198 0.01
461 93 0.00
462 314 0.01
463 155 0.01
464 86 0.00
465 25 0.00
466 1098 0.05
467 761 0.03
468 529 0.02
469 520 0.02
470 1023 0.04
471 696 0.03
472 784 0.03
473 1438 0.06
474 4058 0.18
475 4931 0.22
476 3231 0.14
477 1685 0.07
478 50 0.00
479 2 0.00
ACGTcount: A:0.36, C:0.13, G:0.19, T:0.31
Consensus pattern (475 bp):
AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATG
AATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTACAAAAA
ATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGAC
TATGTTTATGGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATT
TAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGC
ATCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAATGGAGA
TTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTATTTAAAGGAAAATAGGGCAA
AGAAAAGATTTCCATGCAAA
Found at i:2633333 original size:159 final size:157
Alignment explanation
Indices: 2633160--2633808 Score: 373
Period size: 159 Copynumber: 4.2 Consensus size: 157
2633150 GAATCAATGC
*
2633160 CATGTATCCTAATGAAGAGAATGTGTTTTAGCTTCACAATCTTGAAATGAACTGAGA-TAGTTAC
1 CATGTATCCTAATGAAGAGAATGTGTTTTAGCTTC-CAATCTTAAAATGAA-TGAGATTAGTTAC
*
2633224 GAGAATCGATGCTTGTCTTATTTAAGAGATGAGCTTTGTTTTAAAGGAAAATAGGGGAAAGAAAA
64 GAGAATCGATGCTTGTCTTATTTAAGAGATGAGCTTTGCTTT-AAGGAAAATAGGGGAAAGAAAA
*
2633289 TATTTGCATGCAAAAGAAAATCATCAATAT
128 TATTTGCATGCAAAAGAAAAGCATCAATAT
* * * **
2633319 CATTTATCCTAATGAGGAGAATGTGTTTATAG-TGCCTAATCACAAAATGAATGAAGATTA-TTA
1 CATGTATCCTAATGAAGAGAATGTGTTT-TAGCTTCC-AATCTTAAAATGAATG-AGATTAGTTA
* * * * ** * * * *
2633382 CTAGAATCCATGTTTGTCTCT-TTTGAG-GCACAAACTTAGACTTT-ATGAAAATGGTGGGAAA-
63 CGAGAATCGATGCTTGTCT-TATTTAAGAG-ATGAGCTTTG-CTTTAAGGAAAATAG-GGGAAAG
*** * *
2633443 AAAGCCTTT-CATGTGAAATG-AAAGCATCAATAT
124 AAAATATTTGCATG-CAAAAGAAAAGCATCAATAT
* * ** * * ** * * *
2633476 GATGTGTCCTAATG-AGAAGGCTATG-TTTATGTTGTCTTATCCTAAAAAGAATGGGGATTAG-T
1 CATGTATCCTAATGAAG-AGAATGTGTTTTA-GCT-TCCAATCTTAAAATGAAT-GAGATTAGTT
* * * * * * * * *
2633538 ATGAGTATTC-ACGTTTGTCTGA--T---A-ATGA---TT-CTATCA--AAAA-CGGCGGAAGGA
62 ACGAG-AATCGATGCTTGTCTTATTTAAGAGATGAGCTTTGCTTTAAGGAAAATAGG-GGAAAGA
* * * * ** * *
2633589 AAAGT-TTTTCTTGCGACATCAAAGCATCAACAC
125 AAA-TATTTGCATGCAAAAGAAAAGCATCAATAT
* * * *
2633622 CATGAATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAATGAACTGAGA-TAGTTAC
1 CATGTATCCTAATGAAGAGAATGTGTTTTAGCTTC-CAATCTTAAAATGAA-TGAGATTAGTTAC
*
2633686 GAGAATCGATGCTTGTCTTATTTAAGAGATGAGCTTTGTTTTAAAGGAAAATAGGGGAAAGAAAA
64 GAGAATCGATGCTTGTCTTATTTAAGAGATGAGCTTTGCTTT-AAGGAAAATAGGGGAAAGAAAA
*
2633751 TATTTGCATGCAAAAGAAAATCATCAATAT
128 TATTTGCATGCAAAAGAAAAGCATCAATAT
* * *
2633781 CATTTATCCTAATGAGGAGAATATGTTT
1 CATGTATCCTAATGAAGAGAATGTGTTT
2633809 ATAGTGCTTA
Statistics
Matches: 348, Mismatches: 97, Indels: 90
0.65 0.18 0.17
Matches are distributed among these distances:
143 1 0.00
144 5 0.01
145 19 0.05
146 61 0.18
147 7 0.02
148 2 0.01
151 3 0.01
152 4 0.01
155 5 0.01
156 6 0.02
157 63 0.18
158 28 0.08
159 133 0.38
160 11 0.03
ACGTcount: A:0.36, C:0.12, G:0.20, T:0.31
Consensus pattern (157 bp):
CATGTATCCTAATGAAGAGAATGTGTTTTAGCTTCCAATCTTAAAATGAATGAGATTAGTTACGA
GAATCGATGCTTGTCTTATTTAAGAGATGAGCTTTGCTTTAAGGAAAATAGGGGAAAGAAAATAT
TTGCATGCAAAAGAAAAGCATCAATAT
Found at i:2636888 original size:158 final size:155
Alignment explanation
Indices: 2636726--2637806 Score: 403
Period size: 158 Copynumber: 6.8 Consensus size: 155
2636716 AGACTTTGCA
* * *
2636726 AAAAATGGTGGGAAAAAAGCCTTTCATGCGAAATGAAACCTTCAATATGATGTATCCTAAAGAGA
1 AAAAATGGTGGGAAAAAAGCCTTTCATGCGAAAAGAAACCATCAATATCATGTATCCTAAAGAGA
* * *
2636791 AGACTATGTTTGTAGTGCCTTATCTTGAAAAGAATGGGGATTAGTATGGGTATTCATGTTTGTCT
66 AGACT-TGTTTGTAGTGCCTTATCTTGAAAAGAATGGAGATTAGTATGAGAATTCATGTTTGTCT
2636856 TATTTAAGAGACAAACTTTGATTTGATC
130 TATTTAAG-GACAAACTTTGATTT-ATC
** * * * * ** * * * * *
2636884 AAAAACAGT-GGAAGGAAAAGCTTTTCTTACGACATCAAAGCATCAATTTCATGTGTGCTAATGA
1 AAAAATGGTGGGAA--AAAAGCCTTTCATGCGAAAAGAAACCATCAATATCATGTATCCTAAAGA
* * * *
2636948 -AGGGA-TTGTGTT-T--TGCCTTCACAATCTTGAAATGAACT-GAGA--AGTTTCGAGAATTGA
64 GA-AGACTTGT-TTGTAGTGCCTT----ATCTTGAAAAGAA-TGGAGATTAGTAT-GAGAATTCA
*
2637005 TGTTTGTCTTATTTAAGGA-ATGAACTTTGATTTA-A
121 TGTTTGTCTTATTTAAGGACA--AACTTTGATTTATC
** * * *
2637040 AGGAAAATAGG-GAAAAAAAAAG-ATTCACATGC-AAAAGAAAACCATCAATATCATTTATCCTA
1 A--AAAAT-GGTG-GGAAAAAAGCCTT-TCATGCGAAAAG-AAACCATCAATATCATGTATCCTA
* ** * * * * * * * * * ** * *
2637102 ATGAGGTGAATGTGTTTATAATGCCTAATCAT-AAAATGAGTGAAGATCATTACCAGAATCCAAG
60 AAGAGAAGACT-TGTTTGTAGTGCCTTATCTTGAAAA-GAATGGAGATTAGTATGAGAATTCATG
* * * * *
2637166 TTTGTCTCATTTGAGGCTCGAACTTAGACTTTA-C
123 TTTGTCTTATTTAAGG-ACAAACTTTGA-TTTATC
* * * * *
2637200 AAAATTTGGTGGGAAAAAAGCCTTTCATGCAAAAAGAAAGCTTCAATATGATGTATCCTAAAGAG
1 AAAA-ATGGTGGGAAAAAAGCCTTTCATGCGAAAAGAAACCATCAATATCATGTATCCTAAAGAG
* * * *
2637265 AAGGCTTTGTTTGTAGTGCCTTATCTAGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTC
65 AAGAC-TTGTTTGTAGTGCCTTATCTTGAAAAGAATGGAGATTAGTATGAGAATTCATGTTTGTC
*
2637330 TTATTTAAGAGGCAAACTTTGATTCTATC
129 TTATTTAAG-GACAAACTTTGATT-TATC
** * ** * *
2637359 AAAAATGGT-GGAAGGAAATAGTTTTTCTTGC-AACATCAAACCATCAATGTCATGTATCCTAAT
1 AAAAATGGTGGGAA--AAA-AGCCTTTCATGCGAA-AAGAAACCATCAATATCATGTATCCTAAA
* * * * * * * * *
2637422 GA-AGGGAATTTGTTATG--GCTTCAC-AATCTTGAAATGAACT-AAGA-CAGTTACGAGAATTG
62 GAGA-AG-ACTTGTT-TGTAG-TGC-CTTATCTTGAAAAGAA-TGGAGATTAG-TATGAGAATTC
* * *
2637481 ATGCTTGTCTTATTTATGGGA-ATAACTTTGATTTA-A
120 ATGTTTGTCTTATTTA-AGGACA-AACTTTGATTTATC
* * * * *
2637517 AGGAAAATAGG-GGAAAGAAAAG-ATTTGAATGC-AAAAGAAAATCATCAATATCATTTATCCTA
1 A--AAAAT-GGTGGGAA-AAAAGCCTTT-CATGCGAAAAG-AAACCATCAATATCATGTATCCTA
* * * * * * ** * * * *
2637579 AGGAGGAGAATGTATTTATAGTGCCTAATC-ACAAAATGAATGAAGATCATTACT-AGAATCCAT
60 AAGAGAAGACT-TGTTTGTAGTGCCTTATCTTGAAAA-GAATGGAGATTAGTA-TGAGAATTCAT
* *
2637642 GTTTGTCTCT-TTTGAGGCACAAACTTAGACTTTAT-
122 GTTTGTCT-TATTTAAGG-ACAAACTTTGA-TTTATC
* * * * * * *
2637677 GAAAATGGTGGGAAAAAAGCCTTTCATGTGAAACGAAAGCATCAATATGATGTGTCCTAATGAGA
1 AAAAATGGTGGGAAAAAAGCCTTTCATGCGAAAAGAAACCATCAATATCATGTATCCTAAAGAGA
* * * * * * * *
2637742 AGGCTATGTTTAT-GTTGTCTTATCCTAAAAAGAATGGGGATTAGTATGAGTATTCACGTTTGTC
66 AGACT-TGTTTGTAG-TGCCTTATCTTGAAAAGAATGGAGATTAGTATGAGAATTCATGTTTGTC
2637806 T
129 T
2637807 GATAATCTTT
Statistics
Matches: 669, Mismatches: 174, Indels: 161
0.67 0.17 0.16
Matches are distributed among these distances:
155 6 0.01
156 4 0.01
157 104 0.16
158 227 0.34
159 193 0.29
160 120 0.18
161 10 0.01
162 5 0.01
ACGTcount: A:0.36, C:0.12, G:0.20, T:0.32
Consensus pattern (155 bp):
AAAAATGGTGGGAAAAAAGCCTTTCATGCGAAAAGAAACCATCAATATCATGTATCCTAAAGAGA
AGACTTGTTTGTAGTGCCTTATCTTGAAAAGAATGGAGATTAGTATGAGAATTCATGTTTGTCTT
ATTTAAGGACAAACTTTGATTTATC
Found at i:2652798 original size:158 final size:157
Alignment explanation
Indices: 2641273--2653742 Score: 2082
Period size: 158 Copynumber: 79.2 Consensus size: 157
2641263 GATTTCCAAG
* * * * * * *
2641273 GAAAATAAAATCATAAATATCATTTATCCTATAAGAGGACAATGTGTTTATAGTGCGTAATCACA
1 GAAAA-AAAAGCATCAATATCATGTATCCTA-AAGAGAAGAATGTGTTTATAGTGCCTAATCTCA
* * * * *
2641338 AAATGAATGAAGATCATTACTAGAATCAAAGTTTGTCTCATTTGAGGCACGAACTTAGACTTTAC
64 AAA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTAC
*
2641403 AAAAAATGGTGGGAAG-AAAGCCTTTCTTGC
127 AAAAAATGGTGGGAAGAAAAGCATTTCTTGC
** * * * * * * * *
2641433 -AACACGAAAGCATCAATATGATGTATCCTAAAGAAAAGACTATGGTTACAGTGCCTAATTTGGA
1 GAA-AAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCT-CA
** * * * *
2641497 AAAGAATG--G-GGATTAGCTTGAGTACTCATGTTTGTCTTA--AGAGACA--AACTTTGATTCT
64 AAAGAATGAAGATCATTA-CTAGAAT-C-CATGTTTGTCTTATTTGAGGCATGAACTTTGATT-T
* * * **
2641555 ATAAAAAACGAT-GGAAG----GTGTTTCTTGC
125 ACAAAAAATGGTGGGAAGAAAAGCATTTCTTGC
**** * * * * * * *
2641583 GACCCCAAAGCATCAATTTAATGTATCCTAATGA-AGGGAATGTGTTTGT-CT-CCCAATCTCAT
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAGTGCCTAATCTCA-
* * ** * ** * *
2641645 AAAGAAAGGAGATTTTTACAAGAATTGATGCTTGTCTTATTT-AGGGGATGAACTTTGATTT-CG
64 AAAGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGA-GGCATGAACTTTGATTTAC-
* ** *
2641708 AGGAAAATAGG-GCAAAGAAAAG-ATTTCCATGC
127 A-AAAAAT-GGTGGGAAGAAAAGCATTT-CTTGC
* * * * * ** * *
2641740 AAAAAAAAAATCATCAATTTCATTTATCCTAATGAGGGGAATGTGTTTATAGTGCCTAGTCACAA
1 -GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * * ** *
2641805 AATGAATGAAAATCATTACTAGAATCCAAGTTTGTCTCATTTGAGACACAAACTTGGACTTTACA
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTACA
* *
2641870 AAAAATAGTGGGAA-AAAAGC-CTTCTTGC
128 AAAAATGGTGGGAAGAAAAGCATTTCTTGC
* * * * * * * * *
2641898 GGAACAAAA-CATCAATATGATGTATCGTAAAGAGAA-AACTATTTTTATGGTGCCTTATCTTGA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAA-TGTGTTTATAGTGCCTAATC-TCA
* ** * * * * * * *
2641961 AAAGTATGGGGATTAGTA-TGAGTATTCGTGTTTGTCTTATTTTAGAG-AT-AGACATTGATTCT
64 AAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAG-GCATGA-ACTTTGATT-T
* **
2642023 ATC-AAAAACGGT-GGAAGGAAAAGTTTTTCTTGC
125 A-CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
**** * * * * * * * * *
2642056 GACCCTAAAGCTTAAATATCTTGTATCCTAATGA-AGGGAATGTGTTT-TGGCT-CCCATTCTTG
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAG-TGCCTAATC-TC
* * * ** * * ** *
2642118 TAAAGAATGGAGATCGTTA-TGAGAATTTATGCTTGTCTTATTTAAGGGTTGAAGTTTGATTTTA
63 AAAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTA
* * * *
2642182 -AGGAAAATAG-GGCAAGGAAAAG-ATTTCCATGC
126 CA-AAAAATGGTGGGAA-GAAAAGCATTT-CTTGC
*** * * * * *
2642214 -AAAAGAAAATTGTCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAACCACAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * * * * *
2642278 AATGAGTGAAGATCGTTACTAGAATCCAAGTTTATCTTATTTGAGGCATGAACTTAGACTT-CAC
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGATTTACAA
* * *
2642342 AGAAT-TTAGAGG-AGAAAAAGCCTTTCTTGC
129 AAAATGGT-G-GGAAG-AAAAGCATTTCTTGC
** * * * * ** * * * ** *
2642372 GAAACGAAAGCTTCACTATGATGTTTCCTAAAGAGAAGGCTATGTATATAGTGCGTTTTCCTTAA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAAT-CTCAA
** * * * ** * * *
2642437 AAGAATGGGGATTAGTA-TGAGTATTGATGTTTGTCTTATTTAAGAG-ATAAACTTTGAATCTAT
65 AAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAG-GCATGAACTTTG-ATTTA-
* * **
2642500 C-ACAATTGGT-GGAAGGAAAAGTTTTTCTTGC
126 CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** ** * * * * ** *
2642531 GACACCAAAGTTTCAATTTCATATATCCTAATGA-AGTGAATGTCCTT-T-G-GCTCTGATTCTC
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAGTGC-CT-AATCTC
* ** * * * * * *
2642592 ATAAAGAATGGAGATTGTTACGAGAATCGATGCTTGTCTTCTTTAAGGGATGAACTTTGATTTA-
63 A-AAAGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGATTTAC
** *
2642656 AAGGAAAATAGG-GCAAAGAAAAG-ATTTTCATGC
127 AA--AAAAT-GGTGGGAAGAAAAGCA-TTTCTTGC
* * * * * * * *
2642689 -AAAAGAAAATCATCAATACCATTTATCCTAGTA-AGTAGAATGTGTTTATAGTGCCTGACCACA
1 GAAAA-AAAAGCATCAATATCATGTATCCTA-AAGAGAAGAATGTGTTTATAGTGCCTAATCTCA
* * * * * * *
2642752 AAATAAAAGAAGATCATCACTAGAATCCATGTTTGTCTCT-TTTAAAGCACGAACTTAGAGTTTA
64 AAA-GAATGAAGATCATTACTAGAATCCATGTTTGTCT-TATTTGAGGCATGAACTTTGA-TTTA
* * *
2642816 CAAAAAACGGTGGGAA-AAAAGCCTTTTTTGC
126 CAAAAAATGGTGGGAAGAAAAGCATTTCTTGC
* * * * * * *
2642847 GAAACAAAAGCATCAATATGATCTATCCTAATGAGAAGACA-ATGTTTATGGGGCCTAATC-CGG
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGA-ATGTGTTTATAGTGCCTAATCTC--
** * * * * *
2642910 AAAA-AATGGGGATTAGTA-TGAGTATTCATGTTTGTCTTATTTATGAGACA--AACTTTGATTC
63 AAAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTA-TT-TGAGGCATGAACTTTGATT-
**
2642971 TATC-AAAAATGGT-GGAAGGAAAAGTTTTTCTTGC
124 TA-CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** * * * * *
2643005 GACATCAAAGCATCGATGTCTTGTATCCTAATGA-AGAGAATGTGTTT-T-G-GCTTCACATTCT
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAGTGCCT-A-A-TC-
* * * * * * * *
2643066 TGAAAAGAACTG-AGAT-AGTTA-TGAGAATCGAT-TCTTATCTTATTTAAGGTATGAACATCGT
61 TCAAAAGAA-TGAAGATCA-TTACT-AGAATCCATGT-TTGTCTTATTTGAGGCATGAACTTTGA
* * ** * * *
2643127 TTTGA-AGGAAAATAG-GCAAAGAAAA-AATTCCAATGC
122 TTT-ACA-AAAAATGGTGGGAAGAAAAGCATTTC-TTGC
* * * * * *
2643163 -AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCGCAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * * *
2643227 AATGAATGAAGATCATTACTAGAATTCAAGTTTGTCTTATTTGAAGG-ACGAACTTAGACATTAC
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTG-AGGCATGAACTTTGA-TTTAC
*
2643291 AAAAAATGGTGGGAA-AAAAGCCTTTCTTGC
127 AAAAAATGGTGGGAAGAAAAGCATTTCTTGC
** * * * * **** * * *
2643321 GAAACGAAAGCATCAATATGATATATCCTAACGAAAAGGCCATGTTTAT-GTTGTCTTATCGTGA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAG-TGCCTAATC-TCA
* * * * * * * *
2643385 AAAGAATGGAGATTAGTACGAGTATTCATGTTTGTCTTATTTAAGAGACA--AACTTTGATGCTA
64 AAAGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTT--GAGGCATGAACTTTGAT-TTA
* **
2643448 TC-AAAAATGAT-GGAAGGAAAAGTTTTTCTTGC
126 -CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** ** * * * * * *
2643480 TG-CACCAAATTATCAATTTCATGTTTCCTAAATGA-AGGGAATGTGTTT-TGGCTTCAC-AAAC
1 -GAAAAAAAAGCATCAATATCATGTATCCTAAA-GAGA-AGAATGTGTTTATAG-TGC-CTAATC
* * ** * * * * *
2643541 ATGAAAAGAACTG-AGA-CAGTTACGAGAATTGATGCTTGTTTTATTTAAGGGAGGAACTTTGAT
61 -TCAAAAGAA-TGAAGATCA-TTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGAT
* * ** *
2643604 TTAAAGAAAAACAGG-GTAAAGAAAAG-ATTTCCATGC
123 TTACA-AAAAA-TGGTGGGAAGAAAAGCATTT-CTTGC
* * * * * ** * * * *
2643640 -AAAAGAAAATCATCAATATAATTTATCCTAATGAGGAGAATGCATTTTTATTTCCTAATCACAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * * * * * *
2643704 AATGAATGAAAATTATTACTAG-ATCTACGTTTGTCTCATTTGAGGCACGGACTTAGACTTTA-A
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTACA
* * *
2643767 AAAATTTGG-GGGGA-AAAAGCCTTTCTTGC
128 AAAA-ATGGTGGGAAGAAAAGCATTTCTTGC
** * * * * * *
2643796 GAAACGAAAGCATGAATA-CGATGTATCCTAAAGAGAAGACTATGTTTA-AGTTACCTTATCTTG
1 GAAAAAAAAGCATCAATATC-ATGTATCCTAAAGAGAAGAATGTGTTTATAG-TGCCTAATC-TC
** * * * * *
2643859 AAAA-AATGGGGAT--TGTA-TGGGTATTCATGTTTGTCTTATTTAAGAG-ATAAACTTTGATTC
63 AAAAGAATGAAGATCAT-TACT-AGAATCCATGTTTGTCTTATTTGAG-GCATGAACTTTGATT-
* * **
2643919 TACCAAAAACGGT-GGAAGGAAAAGTTTTTCTTGC
124 TACAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** * * * * * * *
2643953 GACATCAAAGCATCAATTTCATGTATCCTAATGA-AGGGATTGTGTTT-TGGCT-CCGATTCTTG
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAG-TGCCTAATC-T-
* * ** * * * * * *
2644015 TAAAA-AATGGAGATTGTTA-TGAGAAACAAGGCTTGTCTTATTTAAGAG-ATGAAATTTGATTT
62 CAAAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAG-GCATGAACTTTGATTT
*** *
2644077 A-AAGGAAAATAGG-AAAAAGAAAAG-ATTTCCGTG-
125 ACAA--AAAAT-GGTGGGAAGAAAAGCATTT-CTTGC
* * * * * *
2644110 GAAAAGAAAAACATAAATATCATTTATCCTATAAGAGGACAATGTGTTTATAGTGCCTAATCACA
1 GAAAA-AAAAGCATCAATATCATGTATCCTA-AAGAGAAGAATGTGTTTATAGTGCCTAATCTC-
* * * *
2644175 AAATAGAA-GAAGATCATTACTAGAAT-CAAGTTTGTCTCATTTGAGGCACGAACTTAGATTTTA
63 AAA-AGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTA
*
2644238 CAAAAAATGGTAGGAA-AAAAGCATTTCTTGC
126 CAAAAAATGGTGGGAAGAAAAGCATTTCTTGC
* * * * *
2644269 -AAAACGAAAGCATCAATATGATGTATCCAAAAGAGAA-AACTATGTTTACAGTGCCTAAT-TCG
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAA-TGTGTTTATAGTGCCTAATCTC-
* ** * * * * *
2644331 AAAAAGATTG--G-GGATTAGCTTGAGTACTCATGTTTGTCCTA--AGAGACA--AACTTTGATT
63 -AAAAGAATGAAGATCATTA-CTAGAAT-C-CATGTTTGTCTTATTTGAGGCATGAACTTTGATT
**
2644389 CT-CTAAAAAATGGT-GGAAGAAAAAGTGTTTCTTGC
124 -TAC-AAAAAATGGTGGGAAG-AAAAGCATTTCTTGC
**** * * * * * * *
2644424 GACCCCAAAGCATCAATTTAATGTATCCTAATAAAG-GGAATGTGTTTGT-CT-CCCAATCTCAT
1 GAAAAAAAAGCATCAATATCATGTATCCTAA-AGAGAAGAATGTGTTTATAGTGCCTAATCTCA-
* * ** * ** * *
2644486 AAAGAAAGGAGATTTTTACGAGAATTGATGCTTGTCTTATTT-ACGGGATGAACTTTGATTTTA-
64 AAAGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGA-GGCATGAACTTTGA-TTTAC
***
2644549 AAGAAAATAGG-CCAAAGAAAAG-ATTTCCATT-C
127 AA-AAAAT-GGTGGGAAGAAAAGCATTT-C-TTGC
* * * * * ** *
2644581 AAAAAAAAAATCATCAATTTCATTTATCCTAATGAGGGGAATGTGTTTATAGTGCCTAATCACAA
1 -GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * *
2644646 AATGAATGAAAATCATTACTAGAATCCAGGTTTGTCTCATTTGAGGCATGAACTTAGAGTTTACA
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTACA
*
2644711 AAAAA-GGTGGGAA-AAAAGCCTTTCTTGC
128 AAAAATGGTGGGAAGAAAAGCATTTCTTGC
* * * * * * **
2644739 GAAATGAAAA-CATCAATATGATGTATTCTAATGAGAAGACA-ATGTTTATGGCACCTAATC-CG
1 GAAA-AAAAAGCATCAATATCATGTATCCTAAAGAGAAGA-ATGTGTTTATAGTGCCTAATCTC-
** * ** * * *
2644801 AAAAAGAATGGGGATTAGCA-TGAGTATTCATGTTTGTCTTATTTAAGAGACA--AACTTTGATT
63 -AAAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTT--GAGGCATGAACTTTGATT
* * * ** *
2644863 CCATAAAAAACGGT-GGAAGGAAAAGTTTTTCTTGT
124 -TACAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** * * * * * * *
2644898 GACACCAAAGCCTCAATTTCATGTATCCTAATGA-AGGGATTGTGTTT-T-G-GCTCGGATTCTC
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAGTGC-C-TAATCTC
* ** * * * * *
2644959 GTAAAA-AATGGAGATTGTTA-TGAGAATCGATGTTTGTCTTATTTAAGGGATGGACTTCGATTT
63 --AAAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGATTT
** * * *
2645022 A-AAGGAAAATAGG-GCAAAGAAAA-AATTTCCAT-A
125 ACAA--AAAAT-GGTGGGAAGAAAAGCATTT-CTTGC
* * * * * * * * *
2645055 TAAAAGAAAATCGTCAATATCATTTATCCTAATGAGGAGAATGTGCTTATAGTGCCTAACCACAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * *
2645120 AATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAAGCACGGACTTAGACTTTAC
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCT-TATTTGAGGCATGAACTTTGA-TTTAC
* *
2645184 AAAAAATGGTGGGAA-AAAAGCCTTTCTTGT
127 AAAAAATGGTGGGAAGAAAAGCATTTCTTGC
** * * * * * * * *
2645214 GAAACGAAACCATCAATATGACGTATCCTAATGAGAAGACTATGTTTAT-GTTGCCTTATCGTGA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAG-TGCCTAATC-TCA
** * * * *** * * *
2645278 AAAGAATGGGGATTAGTA-TGAGTATTTGTATTTG-CTGTATCTAAGAGACA--AACTTTGATTT
64 AAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCT-TAT-T-TGAGGCATGAACTTTGA-TT
** * *
2645339 TATC-AAAAATGGT-GGAAGGAAAAGTTTTTCGTGT
124 TA-CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** * * * * * *
2645373 GACATCAAAGCATCAATGTCATGTATCGTAAAGA-AGGGAAAGCGTTT-T-G-GCTTTACAATCT
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAGTGC-CT--AATC-
* * * * * *
2645434 TGAAAA-AACT-AAGAT-AGTTACGAGAATCGAT-TCTTGTCTTATTTAAGGTATGAACATTG-T
61 TCAAAAGAA-TGAAGATCA-TTACTAGAATCCATGT-TTGTCTTATTTGAGGCATGAACTTTGAT
* ** *
2645494 TCTA-AAGGAAAATAG-GCAAAGAAAAG-ATTTCCATG-
123 T-TACAA--AAAATGGTGGGAAGAAAAGCATTT-CTTGC
* * * * *
2645529 TAAAACAAAATCATCAATATCATTTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCACAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * * * *
2645594 AATGAATCAAGATCATTACCAAAATCCAAGTTTGTCTCATTTGAGGC-TCGAACTTAGACTTTAC
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCAT-GAACTTTGA-TTTAC
** * * *
2645658 AAAATTTGGTGAGAA-AAAAGCGTTTCATGC
127 AAAAAATGGTGGGAAGAAAAGCATTTCTTGC
* * * * ** * * * *
2645688 -AAAACGAAAGCTTCAATATGATGTATCCTAAAGAGCAGGCTATGTTTGTAGTGCCTTATCTAGA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCT-CA
** * * * *
2645752 AAAGAATGGGGATTAGTA-TGAGTATTCATGTTTGTCTTATTTAAGAGGCA--AACTTTGATTCT
64 AAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTT--GAGGCATGAACTTTGATT-T
**
2645814 ATC-AAAAATGGT-GGAAGGAAATAGTTTTTCTTGC
125 A-CAAAAAATGGTGGGAA-GAAA-AGCATTTCTTGC
** * * * * * * *
2645848 -AACATCAAACCATCAATGTCATGTATCCTAATGA-AGGGAATTTG-TTATGGCTTCAC-AATCT
1 GAA-AAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAG-TGC-CTAATC-
* * * * * *
2645909 TGAAATGAACT-AAGA-CAATTACGAGAATCGATGCTTGTCTTATTT-ATGGGATGAACTTTGAT
61 TCAAAAGAA-TGAAGATC-ATTACTAGAATCCATGTTTGTCTTATTTGA-GGCATGAACTTTGAT
* *
2645971 TTA-AAGGAAAATAGG-GGAAAGAAAAG-ATTTGCATGC
123 TTACAA--AAAAT-GGTGGGAAGAAAAGCATTT-CTTGC
* * * ** * *
2646007 -AAAAGAAAATCATCAATATCATTTATCCTAAGGAGGTGAATGTATTTATAGTGCCTAATCACAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* ** *
2646071 AATGAATGAAGATCATTACTAGAGTCCATGTTTGTCTCT-TTTGAGGCACAAACTTAGACTTTA-
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCT-TATTTGAGGCATGAACTTTGA-TTTAC
** * *
2646134 TGAAAATGGTGGGAA-AAAAGGC-TTTCATGT
127 AAAAAATGGTGGGAAGAAAA-GCATTTCTTGC
* * * * * ** * * * *
2646164 GAAACAAAAGCATTAATATGATGTGTCCTAATGAGAAGGCTATGTTTAT-GTTGTCTTATCCTGA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAG-TGCCTAAT-CTCA
** * * * * * *
2646228 AAAGAATGGGGATTAGTA-TGAGTATTCACGTTTGTCTGA--T-A---AT---CTTTGATTCTAT
64 AAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGATT-TA-
* ** **
2646283 C-AAAAA-CGACGGAAGGAAAAGTTTTTCTTGC
126 CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** * * * * * * *
2646314 GACATCAAAGCATCAACACCATGAATCCTAATGA-AGGGAATGTGTTT-TGGCTTCAC-AATCTT
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAG-TGC-CTAATC-T
* * * * * * * * *
2646376 GAAATGAACTG-AGA-CAGTGACGAGAATCGATGCTTGTCTTATTTAAGAG-ATGAGCTTTGTTT
62 CAAAAGAA-TGAAGATCA-TTACTAGAATCCATGTTTGTCTTATTTGAG-GCATGAACTTTGATT
* * *
2646438 TA-AAGGAAAATAGG-GGAAAGAAAA-TATTTGCATGC
124 TACAA--AAAAT-GGTGGGAAGAAAAGCATTT-CTTGC
* * * * *
2646473 -AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * ** * *
2646537 AATGAATGAAGATCACTACTAGAATCCATGTTTGTCTCT-TTTAAGGCACAAACTTAGACTTTGC
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCT-TATTTGAGGCATGAACTTTGA-TTTAC
* * * *
2646601 AAAAGATGGTGGGAA-AAAAACCTTTCTTGT
127 AAAAAATGGTGGGAAGAAAAGCATTTCTTGC
** * * ** * * * * **
2646631 GAAATGAAAGCATCAATATGATGTATCCTAATGAGAAGGCTATGTTTCT-GTTGTCTTATCGTGG
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAG-TGCCTAATC-TCA
* * * * * *
2646695 AAAGAATGAGGATTAGTA-TGAGTATTCATGTTTG-----TTT---G-AT-AATCTCTGATTCTA
64 AAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAGGCATGAA-CTTTGATT-TA
**
2646749 TCAAAAAA------G--GAAAAGTTTTTCTTGC
126 -CAAAAAATGGTGGGAAGAAAAGCATTTCTTGC
* * * * * * * * *
2646774 GATACACAAAGCATCAATTTCACGTATCCTAATGA-AGGGAATGTG-TT-T-GGGCTTCGATTCT
1 GA-AAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAGTGC--CTAATCT
* * * ** * * * ** * * *
2646835 CGTAAAA-TAGGGAGATTGTTGCAAGAAACGGTGCTTGTCTTATTTAAGGGATGAACTTTGATTT
62 C--AAAAGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGATTT
* * *
2646899 A-AAGGAAAA-GAG-GGCTAAGAAAA-TATTTCCATG-
125 ACAA--AAAATG-GTGG-GAAGAAAAGCATTT-CTTGC
* * * *** * * *
2646932 G-AAAAAAATCATAAATATCATTTATCCTGTTGAGGACAATGTGTTTATAGTGCCTAATCACAAA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAAA
* * * ** * *
2646996 ATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCACTTGAGGCACAAACTTAGACTTTATAA
66 A-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTACAA
*
2647061 AAAATGGTGGGAA-AAAAGCCTTTCTTGC
129 AAAATGGTGGGAAGAAAAGCATTTCTTGC
* * * * *
2647089 -AAAACGAAAGCATCAATATGATGTATCCTAAAGAGAAGACTATGTTTACAGTGCCTAAT-TCAG
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTC--
* * * *
2647152 AAAAGAATG-AG--GATTAGCTTGAGTACTCATGTTTGTCTTA--AG-GGACA--AACTTTGATT
63 AAAAGAATGAAGATCATTA-CTAGAAT-C-CATGTTTGTCTTATTTGAGG-CATGAACTTTGATT
* * **
2647209 CTATAAAAAATGAT-GGAAGAAAAAGTGTTTCTTGC
124 -TACAAAAAATGGTGGGAAG-AAAAGCATTTCTTGC
**** * * * * * * * *
2647244 GACCCCAAAGCATCAATTTAATGTATCCTAATGAGGAGAATGTGTTTGT-CT-CCCAATCTTATA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCA-A
* * ** * ** * * *
2647307 AAGAAAGGAGATTGTTACGAGAATTGATGCTTGTCTTATTT-AGGGGATGAACTTCGATTTTA-A
65 AAGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGA-GGCATGAACTTTGA-TTTACA
* ** *
2647370 GGAAAATAGG-GCAAAGAAAAG-ATTTC-TAC
128 -AAAAAT-GGTGGGAAGAAAAGCATTTCTTGC
* * * * ** * *
2647399 GCAAAAAGAAATCATCAATTTCATTTATCCTAATGAGGGGAACGTGTTTATAGTGCCTAATCACA
1 G-AAAAA-AAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCA
* * ** * *
2647464 AAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTTTTTTGAGGTACAAACTTAGACTTTAT
64 AAA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTAC
* *
2647529 AAAAAATGTTGGGAA-AAAAGCCTTTCTTGC
127 AAAAAATGGTGGGAAGAAAAGCATTTCTTGC
* ** * * * * * * *
2647559 -AGAGCAAAGCATCAATATGATGTATCATAAAGAGAA-AACTATTTTTATGGTGCCTTATCTGGA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAA-TGTGTTTATAGTGCCTAATCT-CA
* ** * * * * *
2647622 AAAAAAT--AG-GGATTAGCTTAAGTATTCATGTTCGTCTTATTTAAGAGACA--AACATTGATT
64 AAAGAATGAAGATCATTA-C-T-AGAATCCATGTTTGTCTTATTT--GAGGCATGAACTTTGATT
* ** * **
2647682 CTATC-AAAAACGGT-GGAAGGAAAAGTTTTTTTTAT
124 -TA-CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
**** * * * * * * * *
2647717 GACCCCAAAGCATCAATTTCTTGTATCCTAATGA-AGGGCATGTGTTT-TGGCT-CCCATTCTCG
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAG-TGCCTAATCTC-
* ** ** * * **
2647779 TAAAGAATGAAGATTGTTA-TGAGAATTTATGCTTGTCTTATTTAAGGGTTGAACTTTGATTTTA
63 AAAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTA
*
2647843 -AGGAAAAT--TGGGCAAAGAAAAG-ATTTCTATGC
126 CA-AAAAATGGTGGG--AAGAAAAGCATTTCT-TGC
* * * * * * * *
2647875 AAAAAAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAATGCCTAACCACAAA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAAA
* * * * * *
2647940 ATGAATGAAGATCTTTACTAGAATCCAAGTTTATCTTATTTGAGGCATGAACTTAGACTTTATAG
66 A-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTACAA
** *
2648005 AATTTGGT-GG-AGAAAAAGCCTTTCTTGC
129 AAAATGGTGGGAAG-AAAAGCATTTCTTGC
* * * * * ** * * * *
2648033 -AAAATGAAAGCTTCAATATGATGTTTTCTAAAGAGAAGGCTATGTTTATAATGCCT-TTCCTTA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAAT-CTCA
** * * * * * * *
2648096 AAAGAATGGGGATTAGTA-TGAGTATTCATGTTTGCCTTATTTAAGAGACA--AACTTTGAATCT
64 AAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTT--GAGGCATGAACTTTG-ATTT
* * ** *
2648158 ATC-ACAAATGGTGGAAAGAAAAGTTTTTCTTGT
125 A-CAAAAAATGGTGGGAAGAAAAGCATTTCTTGC
* ** * * * * *
2648191 GATACCAAAGCATCAATTTCATGTATCCTAAAGA-AGGGAATGTGTTT-TGGCT-CCGATTCTCA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAG-TGCCTAATCTCA
* ** * * * * * * *
2648253 TAAAGAATGGAGATTGTTACGAGAA-ACAAGAATCGTCTTATTTAAGGGATGAACTTTGATTTA-
64 -AAAGAATGAAGATCATTACTAGAATCCATG-TTTGTCTTATTTGAGGCATGAACTTTGATTTAC
* ** **
2648316 AAGGAAAATAAG-GCAAAGAAAAG-ATTTCCAAG-
127 AA--AAAAT-GGTGGGAAGAAAAGCATTT-CTTGC
* * * * * *
2648348 GAAAAGAAAATCATAAATATCATTTATCCTATAAGAGGACAATGTGTTTATAGTGCGTAAT-TAC
1 GAAAA-AAAAGCATCAATATCATGTATCCTA-AAGAGAAGAATGTGTTTATAGTGCCTAATCT-C
* * * * *
2648412 AAAATGAATGAAGATCATTACTAGAATCAAAGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA
63 AAAA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTA
*
2648477 CAAAAAATGGTGGGAAG-AAAGCCTTTCTTGC
126 CAAAAAATGGTGGGAAGAAAAGCATTTCTTGC
** * * * * * * * *
2648508 -AACACGAAAGCATCAATATGATGTATCCTAAAGAAAAGACTATGGTTACAGTGCCTAATTTGGA
1 GAA-AAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCT-CA
** * * * *
2648572 AAAGAATG--G-GGATTAGCTTGAGTACTCATGTTTGTCTTA--AGAGACA--AACTTTGATTCT
64 AAAGAATGAAGATCATTA-CTAGAAT-C-CATGTTTGTCTTATTTGAGGCATGAACTTTGATT-T
* * * **
2648630 ATAAAAAACGAT-GGAAG----GTGTTTCTTGC
125 ACAAAAAATGGTGGGAAGAAAAGCATTTCTTGC
**** * * * * * * *
2648658 GACCCCAAAGCATCAATTTAATGTATCCTAATGA-AGGGAATGTGTTTGT-CT-CCCAATCTCAT
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAGTGCCTAATCTCA-
* * ** * ** * *
2648720 AAAGAAAGGAGATTTTTACAAGAATTGATGCTTGTCTTATTT-AGGGGATGAACTTTGATTT-CG
64 AAAGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGA-GGCATGAACTTTGATTTAC-
* ** *
2648783 AGGAAAATAGG-GCAAAGAAAAG-ATTTCCATGC
127 A-AAAAAT-GGTGGGAAGAAAAGCATTT-CTTGC
* * * * * ** * *
2648815 AAAAAAAAAAAATCATCAATTTCATTTATCCTAATGAGGGGAATGTGTTTATAGTGCCTAGTCAC
1 ---GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTC
* * * ** *
2648880 AAAATGAATGAAAATCATTACTAGAATCCATGTTTGTCTCATTTGAGACACAAACTTGGACTTTA
63 AAAA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTA
* *
2648945 CAAAAAATAGTGGGAA-AAAAGC-CTTCTTGC
126 CAAAAAATGGTGGGAAGAAAAGCATTTCTTGC
* * * * * * * * *
2648975 GGAACAAAA-CATCAATATGATGTATCGTAAAGAGAA-AACTATTTTTATGGTGCCTTATCTTGA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAA-TGTGTTTATAGTGCCTAATC-TCA
* ** * * * * * * *
2649038 AAAGTATGGGGATTAGTA-TGAGTATTCGTGTTTGTCTTATTTAAGAGACA-G-ACATTGATTCT
64 AAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTT--GAGGCATGAACTTTGATT-T
** * **
2649100 ATTAAAAACGGT-GGAAGGAAAAGTTTTTCTTGC
125 ACAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
**** * * * * * * * * *
2649133 GACCCCAAAGCTTAAATTTCTTGTATCCTAATGA-AGGGAATGTGTTT-TGGCT-CCCATTCTCG
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAG-TGCCTAATCTC-
* * ** ** * * ** *
2649195 TAAAGAATGGAGATTGTTA-TGAGAATTTATGCTTGTCTTATTTAAGGGTTGAAGTTTGATTTTA
63 AAAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTA
* * * *
2649259 -AGGAAAATAG-GGCAAGGAAAAG-ATTTCCATGC
126 CA-AAAAATGGTGGGAA-GAAAAGCATTT-CTTGC
*** * * * * *
2649291 -AAAAGAAAATTGTCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAACCACAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * * * * * *
2649355 AATGAGTGAAGATCGTTACTAGAATCCAAGTTTATCTTATTTGAAGCATGAACTTAGACTT-CAC
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGATTTACAA
* * *
2649419 AGAAT-TTAGAGG-AGAAAAAGCCTTTCTTGC
129 AAAATGGT-G-GGAAG-AAAAGCATTTCTTGC
** * * * * ** * * ** *
2649449 GAAACGAAAGCTTCACTATGATGTTTCCTAAAGAGAAGGCTATGTATATAGTGCCTTTTCCTTAA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAAT-CTCAA
** * * * ** * *
2649514 AAGAATGGGGATTAGTA-TGAGTATTGATGTTTGTCTTATTTAAGAGACA--AACTTTGAATCTA
65 AAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTT--GAGGCATGAACTTTG-ATTTA
* * **
2649576 TC-ACAATTGGT-GGAAGGAAAAGTTTTTCTTGC
126 -CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** ** * * * * * * *
2649608 GACACCAAAGTTTCAATTTCATATATCCTAATGA-AGTGAATGTGTTT-TGGCT-CCGATTCTCG
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAG-TGCCTAATCTC-
* * * ** * * * * * *
2649670 TATAGAATGGAGATTGTTACGAGAATCGATGCTTGTCTTCTTTAAGGGATGAACTTTGATTTA-A
63 AAAAGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGATTTACA
* ** * *
2649734 AGGAATATAGG-GCAAAGAAAAG-ATTTTCATAC
128 A--AAAAT-GGTGGGAAGAAAAGCA-TTTCTTGC
* * * * * * *
2649766 -AAAAGAAAATCATCAATATCATTTATCCTAGTA-AGTAGAATGTGTTTATAGTGCCTGACCACA
1 GAAAA-AAAAGCATCAATATCATGTATCCTA-AAGAGAAGAATGTGTTTATAGTGCCTAATCTCA
* * * * * * * *
2649829 AAATAAAAGAAGATCATCACTAGAATCCATGTTTGTCTTTTTTAAAGCACGAACTTAGAGTTTAC
64 AAA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTAC
* * *
2649894 AAAAAACGGTGGGAA-AAAAGCCTTTTTTGC
127 AAAAAATGGTGGGAAGAAAAGCATTTCTTGC
** * * * *
2649924 GAAATGAAAGCATCAATATGATGTATCCTAATGAGAAGACAATGT-TTTATGGGGCCTAATC-CG
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAG--AATGTGTTTATAGTGCCTAATCTC-
** * * * * *
2649987 GAAAA-AATGGGGATTAGTA-TGAGTATTCATGTTTGTCTTATTTATGAGACA--AACTTTGATT
63 -AAAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTA-TT-TGAGGCATGAACTTTGATT
* **
2650048 CTATC-AAAAACGGT-GGAAGGAAAAGTTTTTCTTGC
124 -TA-CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** * * * * * * *
2650083 GACATCAAAGCATCGATGTCTTGTATCCTAATGA-AGGGAATGTATTT-T-G-GCTTCACATTCT
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAGTGCCT-A-A-TC-
* * * * * *
2650144 TCAAAAGAACTG-AGAT-AGTTA-TGAGAATCGAT-TCTTATCTTATTTAAGGTATGAACATTGT
61 TCAAAAGAA-TGAAGATCA-TTACT-AGAATCCATGT-TTGTCTTATTTGAGGCATGAACTTTGA
* * ** * * *
2650205 TTTGA-AGGAAAATAG-GCAAAGAAAA-AATTCCAATGC
122 TTT-ACA-AAAAATGGTGGGAAGAAAAGCATTTC-TTGC
* * * * * *
2650241 -AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATATGTTTATAGTGCCTAATCGCAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * * * * *
2650305 AATGAATGAAGATCATTACTAGAATTCAAGTTTGTCTTATTTGAAGCACGGACTTAGACATTACA
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTACA
*
2650370 AAAAATGGTGGGAA-AAAAGCCTTTCTTGC
128 AAAAATGGTGGGAAGAAAAGCATTTCTTGC
** * * * * ** * * * *
2650399 GAAACGAAAGCATCAATATGATATATCCTAATGAAAAGGCTATGTTTAT-GTTGTCTTATCGTGA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAG-TGCCTAATC-TCA
* * * * * * *
2650463 AAAGAATGGAGATTAGTA-TGAGTATTCATGTTTGTCTTATTTAAGAGACA--AACTTTGATGCT
64 AAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTT--GAGGCATGAACTTTGAT-TT
* **
2650525 ATC-AAAAATGAT-GGAAGGAAAAGTTTTTCTTGC
125 A-CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** ** * * * * *
2650558 TG-CACCAAATTATCAATTTCATGTATCCTAAATGA-AGGGAATGTGTTT-TGGCTTCAC-AAAC
1 -GAAAAAAAAGCATCAATATCATGTATCCTAAA-GAGA-AGAATGTGTTTATAG-TGC-CTAATC
* * ** * * * * *
2650619 ATGAAAAGAATTG-AGA-CAGTTACGAGAATTGATGCTTGTTTTATTTAAGGGAGGAACTTTGAT
61 -TCAAAAGAA-TGAAGATCA-TTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGAT
* * * *
2650682 TTAAAGAAAAATAGGAT--AAAGAAAA-TATTTCCATGC
123 TTACA-AAAAAT-GG-TGGGAAGAAAAGCATTT-CTTGC
* * * * * ** * * * *
2650718 -AAAAGAAAATCATCAATATAATTTATCCTAATGAGGAGAATGCATTTTTATTTCCTAATCACAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * * * * *
2650782 AATGAATGAAAATTATTACTAG-ATCTACGTTTGTCTCATTTGAGGCACGAACTTAGACTTTA-A
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTACA
* * *
2650845 AAAATTTGGGGGGAA-AAAAGCCTTTCTTGC
128 AAAA-ATGGTGGGAAGAAAAGCATTTCTTGC
** * * * * * *
2650875 GAAACGAAAGCATGAATA-CGATGTATCCTAAAGAGAAGACTATGTTTA-AGTTACCTTATCTTG
1 GAAAAAAAAGCATCAATATC-ATGTATCCTAAAGAGAAGAATGTGTTTATAG-TGCCTAATC-TC
** * * * * *
2650938 AAAA-AATGGGGAT--TGTA-TGGGTATTCATGTTTGTCTTATTTAAGAG-ATAAACTTTGATTC
63 AAAAGAATGAAGATCAT-TACT-AGAATCCATGTTTGTCTTATTTGAG-GCATGAACTTTGATT-
* * **
2650998 TACCAAAAACGGT-GGAAGGAAAAGTTTTTCTTGC
124 TACAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** * * * * * * *
2651032 GACATCAAAGCATCAATTTCATGTATCCTAATGA-AGGGATTGTGTTT-TGGCT-CCGATTCTTG
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAG-TGCCTAATC-T-
* * ** * * * * * * *
2651094 TAAAA-AATGGAGATTGTTACGAGAAACAAGGCTTGTCTTATTTAAGAG-ATGAAATTTGATTTA
62 CAAAAGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAG-GCATGAACTTTGATTTA
*** *
2651157 -AAGGAAAATAGG-AAAAAGAAAAG-ATTTCCGTG-
126 CAA--AAAAT-GGTGGGAAGAAAAGCATTT-CTTGC
* * * * * * *
2651189 GAAAAGAAAAACATAAATATCATTTATCCTATAAGAGGACAATGCGTTTATAGTGCCTAATCACA
1 GAAAA-AAAAGCATCAATATCATGTATCCTA-AAGAGAAGAATGTGTTTATAGTGCCTAATCTCA
* * * * *
2651254 AAA-TA-GAAGATCATTACTAGAATCCAAGTTTGTCTCATTTGAGGCACGAACTTAGATTTTACA
64 AAAGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTACA
*
2651317 AAAAATGGTAGGAA-AAAAGCATTTCTTGC
128 AAAAATGGTGGGAAGAAAAGCATTTCTTGC
* * * * * *
2651346 -AAAATGAAAGCATCAGTATGATGTATCCAAAAGAGAA-AACTATGTTTACAGTGCCTAAT-TCG
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAA-TGTGTTTATAGTGCCTAATCTC-
* ** * * * * *
2651408 GAAAAGATTG--G-GGATTAGCTTGAGTACTCATGTTTGTCCTA--AGAGACA--AACTTTGATT
63 -AAAAGAATGAAGATCATTA-CTAGAAT-C-CATGTTTGTCTTATTTGAGGCATGAACTTTGATT
* **
2651466 CTATAAAAAATGGT-GGAAGAAAAGTGTTTCTTGC
124 -TACAAAAAATGGTGGGAAGAAAAGCATTTCTTGC
**** * * * * * *
2651500 GACCCCAAAGCATCAATTTAATGTATCCTAATAAAG-GGAATGTG-TT-TGGCT-CCCAATCTCA
1 GAAAAAAAAGCATCAATATCATGTATCCTAA-AGAGAAGAATGTGTTTATAG-TGCCTAATCTCA
* * ** * ** * *
2651561 TAAAGAAAGGAGATTTTTACGAGAATTGATGCTTGTCTTATTT-ACGGGATGAACTTTGATTTTA
64 -AAAGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGA-GGCATGAACTTTGA-TTTA
* ***
2651625 AAAAAAATAGG-CCAAAGAAAAG-ATTTCCATT-C
126 CAAAAAAT-GGTGGGAAGAAAAGCATTT-C-TTGC
* * * * * ** *
2651657 AAAAAAAAAATCATCAATTTCATTTATCCTAATGAGGGGAATGTGTTTATAGTGCCTAATCACAA
1 -GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * *
2651722 AATGAATGAAAATCATTACTAGAATCCAGGTTTGTCTCATTTGAGGCATGAACTTAGACTTTACA
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTACA
*
2651787 AAAAA-GGTGGGAA-AAAAGCCTTTCTTGC
128 AAAAATGGTGGGAAGAAAAGCATTTCTTGC
* * * * *
2651815 -AAAATGAAAA-CATCAATATGATGTATTCTAATGAGAAGACA-ATGTTTATGGTGCCTAATCTG
1 GAAAA--AAAAGCATCAATATCATGTATCCTAAAGAGAAGA-ATGTGTTTATAGTGCCTAATCT-
* ** * * *
2651877 AAAAAGAAT--AG-GGATTAGCATGAGTATTCATGTTTGTCTTATTT-AAG-A-GAAACTTTGAT
62 CAAAAGAATGAAGATCATTA-C-T-AGAATCCATGTTTGTCTTATTTGAGGCATG-AACTTTGAT
* * * ** *
2651936 TCCATAAAAAACGGT-GGAAGGAAAAGTTTTTCTTGT
123 T-TACAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** * * * * * * *
2651972 GACACCAAAGCCTCAATTTCATGTATCCTAATGA-AGGGATTGTGTTT-T-G-GCTCGGATTCTC
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAGTGC-C-TAATCTC
* ** * * * * * **
2652033 GTAAAA-AATGGAGATTGTTA-TGAGAATCGATGCTTGTCTTATTTAAGGGATGGACTTCAATTT
63 --AAAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGATTT
** * *
2652096 A-AAGGAAAATAGG-GCAAAGAAAAG-ATTTCCAT-A
125 ACAA--AAAAT-GGTGGGAAGAAAAGCATTT-CTTGC
* * * * * * * * *
2652129 TAAAAGAAAATCGTCAATATCATTTATCCTAATGAGGAGAATGTGCTTATAGTGCCTAACCACAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * *
2652194 AATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCT-TTTGAAGCACG-ACTTAGACTTTAC
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCT-TATTTGAGGCATGAACTTTGA-TTTAC
* *
2652257 AAAAAATGGTGGGAA-AAAAGCCTTTCTTGT
127 AAAAAATGGTGGGAAGAAAAGCATTTCTTGC
** * * * * * * * * *
2652287 GAAACGAAACCATCAATATGACGTATCCTAATGAGAGGACTATGTTTAT-GTTGCCTTATCCTGA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAG-TGCCTAAT-CTCA
** * * * * * * *
2652351 AAAGAATGGGGATTAGTA-TGAGTATTCATATTTG-CTGTATCTAAGAGACA--AACTTTGATTC
64 AAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCT-TAT-T-TGAGGCATGAACTTTGATT-
* ** * *
2652412 TATAAAAAATGGT-GGAAGGAAAAGTTTTTCGTGT
124 TACAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** * * * * *
2652446 GACATCAAAGCATCAATGTCATGTATCGTAAAGA-AGGGAAAGTGTTT-T-G-GCTTTACAATCT
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAGTGC-CT--AATC-
* * * * *
2652507 TGAAAAGAACT-AAGAT-AGTTA-TGAGAATCGAT-TCTTGTCTTATTTAAGGTATGAACATTG-
61 TCAAAAGAA-TGAAGATCA-TTACT-AGAATCCATGT-TTGTCTTATTTGAGGCATGAACTTTGA
* * * ** *
2652567 TTCTATAGGAAAATAG-GCAAAGAAAAG-ATTTCCATG-
122 TT-TACA-AAAAATGGTGGGAAGAAAAGCATTT-CTTGC
* * * * *
2652603 TAAAACAAAATCATCAATATCATTTATCCTAATGAGAAGAATGTGTTTATAGTGCCTAATCACAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* *
2652668 AATGAATCAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTAGACTTTACA
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTACA
*
2652733 AAAAATGGTGGGAA-AAAAGCCTTTCTTGC
128 AAAAATGGTGGGAAGAAAAGCATTTCTTGC
* * * * * *
2652762 GAAAAAAAAGCTTCAATATGATGTATCCTAAAGAGAAGACTATGTTTATAGTGCCTTATCCTGAA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAAT-CTCAA
** * * * * * * * * *
2652827 AAGAATGGGGATTAGTA-TGAGTATTCATTTTTATCTTATTTAAGAG-ATAAACTTTGACTATAT
65 AAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAG-GCATGAACTTTGA-TTTA-
* * **
2652890 C-AAGAAGGGT-GGAAGGAAAAGTTTTTCTTGC
126 CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
** * * * * * * * * *
2652921 -AACATTAAAGCATCAGTTTCATATATCCTAATGA-AGGGAAAGAGTTT-TGGCTTCAC-AATCT
1 GAA-AAAAAAGCATCAATATCATGTATCCTAAAGAGA-AGAATGTGTTTATAG-TGC-CTAATC-
* * * ** * * *
2652982 TGAAAA-AACT-AAGA-CAGTTACGAGAATCAATCCTTGTCTT-TTTAAGGGATGAACTTTGAAT
61 TCAAAAGAA-TGAAGATCA-TTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGATT
** ** *
2653043 TA-AAGGAAAATAGG-GCAAAGAAAAG-ATTTCAAAGT
124 TACAA--AAAAT-GGTGGGAAGAAAAGCATTTC-TTGC
* * * *
2653078 GAAAGAAAATCATCAATATCATTTATCCTACAA-AGGAGAATGTGTTTATAGTGCCTAATCAT-A
1 GAAAAAAAAGCATCAATATCATGTATCCTA-AAGAGAAGAATGTGTTTATAGTGCCTAATC-TCA
* * * * * *
2653141 AAATGAAAGAAGATCATTACTAGAATCCAAGTTTATCTCATTTGAGGCATGAACCTAGACTTTAC
64 AAA-GAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGA-TTTAC
* * * *
2653206 AAAAAATGGTTGGAA-AAAAGCCTTCCATGC
127 AAAAAATGGTGGGAAGAAAAGCATTTCTTGC
** * * ** ** * *
2653236 GAAACGAAAGCTTCAATATGATGTATCCTAAAGAGAAGTCTACGTTTATAGTGCCTTATCTTGAA
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATC-TCAA
* * * * * * *
2653301 AAGAATTG-GGATTAGTA-TGAGTATTCATGTTTGTCATATTTAGGAGACA--AACTTTGATTCT
65 AAGAA-TGAAGATCATTACT-AGAATCCATGTTTGTCTTATTT--GAGGCATGAACTTTGATT-T
**
2653362 ATC-AAAAATGGT-GGAAGGAAAAGTTTTTCTTGC
125 A-CAAAAAATGGTGGGAA-GAAAAGCATTTCTTGC
* ** * * * *
2653395 GACACCAAAGCATCAATTTCATGTATCCT--AGTGAAGGGAATGTGTTTAT-G-GCTTGGATTCT
1 GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAA--GAATGTGTTTATAGTGCCT--AATC-
** * * ** * ** *
2653456 TGTAAAGAGTGGAGATTGTTA-TGAGAATCGATACTTGTCTTATTTAAGAG-ATGAACTTTGATT
61 TCAAAAGAATGAAGATCATTACT-AGAATCCATGTTTGTCTTATTTGAG-GCATGAACTTTGATT
* * ** * * *
2653519 TAAAGGAAAAAAGG-GCAAAGAAAA-AATATCCATGC
124 TACA--AAAAATGGTGGGAAGAAAAGCAT-TTCTTGC
* * * ** * * *
2653554 -AAAAGAAAATCATCAATATCATTTATCTTAATTAGGAGAATGTGTTTATAGTGCCTAACCACAA
1 GAAAA-AAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAA
* * * *
2653618 AATGAATGAAGATCATTCCTAGAATCCATGTTTGTCTCT-TTTGAAGCACGAACTTAGACTTTAC
65 AA-GAATGAAGATCATTACTAGAATCCATGTTTGTCT-TATTTGAGGCATGAACTTTGA-TTTAC
* * * *
2653682 AATAAATTGTGGGAA-AAAAGCCTTTCTTGT
127 AAAAAATGGTGGGAAGAAAAGCATTTCTTGC
** * *
2653712 GAAACGAAAGCTTCAATATGATGTATCCTAA
1 GAAAAAAAAGCATCAATATCATGTATCCTAA
2653743 TTAGAAGACT
Statistics
Matches: 8679, Mismatches: 2626, Indels: 2012
0.65 0.20 0.15
Matches are distributed among these distances:
141 1 0.00
142 3 0.00
143 34 0.00
144 34 0.00
147 4 0.00
148 67 0.01
149 23 0.00
150 175 0.02
151 24 0.00
152 62 0.01
153 99 0.01
154 170 0.02
155 263 0.03
156 566 0.07
157 1318 0.15
158 3035 0.35
159 1916 0.22
160 730 0.08
161 92 0.01
162 57 0.01
163 5 0.00
164 1 0.00
ACGTcount: A:0.36, C:0.13, G:0.19, T:0.31
Consensus pattern (157 bp):
GAAAAAAAAGCATCAATATCATGTATCCTAAAGAGAAGAATGTGTTTATAGTGCCTAATCTCAAA
AGAATGAAGATCATTACTAGAATCCATGTTTGTCTTATTTGAGGCATGAACTTTGATTTACAAAA
AATGGTGGGAAGAAAAGCATTTCTTGC
Found at i:2658912 original size:20 final size:20
Alignment explanation
Indices: 2658887--2658939 Score: 74
Period size: 20 Copynumber: 2.6 Consensus size: 20
2658877 GTTTGAAGCA
2658887 ATGTATCGATACAAT-T-CATC
1 ATGTATCGATACAATGTGC--C
2658907 ATGTATCGATACAATGTGCC
1 ATGTATCGATACAATGTGCC
2658927 ATGTATCGATACA
1 ATGTATCGATACA
2658940 TATAGTGGTA
Statistics
Matches: 31, Mismatches: 0, Indels: 4
0.89 0.00 0.11
Matches are distributed among these distances:
20 29 0.94
21 1 0.03
22 1 0.03
ACGTcount: A:0.34, C:0.19, G:0.15, T:0.32
Consensus pattern (20 bp):
ATGTATCGATACAATGTGCC
Found at i:2659648 original size:22 final size:20
Alignment explanation
Indices: 2659609--2659651 Score: 59
Period size: 22 Copynumber: 2.0 Consensus size: 20
2659599 GGCTCTCGTT
*
2659609 AAAAAATTTTCCCTTTGATA
1 AAAAAATTTTCCCCTTGATA
2659629 AAAAAATTTCTCCCCCTTGATA
1 AAAAAATTT-T-CCCCTTGATA
2659651 A
1 A
2659652 TCAGTTATAA
Statistics
Matches: 20, Mismatches: 1, Indels: 2
0.87 0.04 0.09
Matches are distributed among these distances:
20 9 0.45
21 1 0.05
22 10 0.50
ACGTcount: A:0.40, C:0.21, G:0.05, T:0.35
Consensus pattern (20 bp):
AAAAAATTTTCCCCTTGATA
Found at i:2661412 original size:22 final size:21
Alignment explanation
Indices: 2661377--2661426 Score: 59
Period size: 21 Copynumber: 2.4 Consensus size: 21
2661367 TTTGTTGATG
*
2661377 ATTTTG-A-TGAAAAATGAAGT
1 ATTTTGAAGTGAAAAAT-AAGA
2661397 ATTTTGAAGTGAAAAATAAGA
1 ATTTTGAAGTGAAAAATAAGA
*
2661418 AATTTGAAG
1 ATTTTGAAG
2661427 AAGATTTGAT
Statistics
Matches: 26, Mismatches: 2, Indels: 3
0.84 0.06 0.10
Matches are distributed among these distances:
20 6 0.23
21 12 0.46
22 8 0.31
ACGTcount: A:0.48, C:0.00, G:0.20, T:0.32
Consensus pattern (21 bp):
ATTTTGAAGTGAAAAATAAGA
Found at i:2661423 original size:21 final size:22
Alignment explanation
Indices: 2661384--2661426 Score: 61
Period size: 21 Copynumber: 2.0 Consensus size: 22
2661374 ATGATTTTGA
* *
2661384 TGAAAAATGAAGTATTTTGAAG
1 TGAAAAATGAAGAAATTTGAAG
2661406 TGAAAAAT-AAGAAATTTGAAG
1 TGAAAAATGAAGAAATTTGAAG
2661427 AAGATTTGAT
Statistics
Matches: 19, Mismatches: 2, Indels: 1
0.86 0.09 0.05
Matches are distributed among these distances:
21 11 0.58
22 8 0.42
ACGTcount: A:0.51, C:0.00, G:0.21, T:0.28
Consensus pattern (22 bp):
TGAAAAATGAAGAAATTTGAAG
Found at i:2661552 original size:13 final size:13
Alignment explanation
Indices: 2661534--2661559 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
2661524 ATAGTAACCC
2661534 TTGTATCGATACA
1 TTGTATCGATACA
2661547 TTGTATCGATACA
1 TTGTATCGATACA
2661560 AAGAATATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:2664169 original size:13 final size:13
Alignment explanation
Indices: 2664151--2664176 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
2664141 CTATTTATGA
2664151 TGTATCGATACAC
1 TGTATCGATACAC
2664164 TGTATCGATACAC
1 TGTATCGATACAC
2664177 ACAAATATGT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.23, G:0.15, T:0.31
Consensus pattern (13 bp):
TGTATCGATACAC
Found at i:2664307 original size:22 final size:22
Alignment explanation
Indices: 2664253--2664307 Score: 103
Period size: 21 Copynumber: 2.5 Consensus size: 22
2664243 GTGAACAGTG
2664253 TGAACAGTGATGTATCGATACA
1 TGAACAGTGATGTATCGATACA
2664275 TGAA-AGTGATGTATCGATACA
1 TGAACAGTGATGTATCGATACA
2664296 TGAACAGTGATG
1 TGAACAGTGATG
2664308 AATAGTGATG
Statistics
Matches: 32, Mismatches: 0, Indels: 2
0.94 0.00 0.06
Matches are distributed among these distances:
21 21 0.66
22 11 0.34
ACGTcount: A:0.36, C:0.11, G:0.25, T:0.27
Consensus pattern (22 bp):
TGAACAGTGATGTATCGATACA
Found at i:2664314 original size:10 final size:10
Alignment explanation
Indices: 2664295--2664325 Score: 53
Period size: 10 Copynumber: 3.1 Consensus size: 10
2664285 GTATCGATAC
2664295 ATGAACAGTG
1 ATGAACAGTG
*
2664305 ATGAATAGTG
1 ATGAACAGTG
2664315 ATGAACAGTG
1 ATGAACAGTG
2664325 A
1 A
2664326 AAATGAGATT
Statistics
Matches: 19, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
10 19 1.00
ACGTcount: A:0.42, C:0.06, G:0.29, T:0.23
Consensus pattern (10 bp):
ATGAACAGTG
Found at i:2664413 original size:53 final size:53
Alignment explanation
Indices: 2664349--2664485 Score: 238
Period size: 53 Copynumber: 2.6 Consensus size: 53
2664339 CTACTTCCAA
*
2664349 TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAATGACC
1 TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTACCAATGACC
* *
2664402 TGTATCGATACATATTGTGTGTATCGATACAAATTTGGCTACTACCAATGTCC
1 TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTACCAATGACC
2664455 TGTATCGATACATATTTGTGTGTATCGATAC
1 TGTATCGATACATATTT-TGTGTATCGATAC
2664486 TATGCAATTT
Statistics
Matches: 79, Mismatches: 4, Indels: 1
0.94 0.05 0.01
Matches are distributed among these distances:
53 66 0.84
54 13 0.16
ACGTcount: A:0.28, C:0.18, G:0.18, T:0.37
Consensus pattern (53 bp):
TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTACCAATGACC
Found at i:2664518 original size:20 final size:20
Alignment explanation
Indices: 2664455--2664525 Score: 74
Period size: 20 Copynumber: 3.5 Consensus size: 20
2664445 ACCAATGTCC
**
2664455 TGTATCGATACATATTTGTG
1 TGTATCGATACATATTAATG
* *
2664475 TGTATCGATAC-TATGCAATT
1 TGTATCGATACATAT-TAATG
2664495 TGTATCGATACAT-TTAAATG
1 TGTATCGATACATATT-AATG
2664515 TGTATCGATAC
1 TGTATCGATAC
2664526 TTTTCAGGGT
Statistics
Matches: 42, Mismatches: 6, Indels: 6
0.78 0.11 0.11
Matches are distributed among these distances:
19 3 0.07
20 38 0.90
21 1 0.02
ACGTcount: A:0.30, C:0.13, G:0.17, T:0.41
Consensus pattern (20 bp):
TGTATCGATACATATTAATG
Found at i:2664591 original size:21 final size:21
Alignment explanation
Indices: 2664565--2664605 Score: 57
Period size: 21 Copynumber: 2.0 Consensus size: 21
2664555 GTCAACCTTC
2664565 TGTATTAATACCAATA-GTATA
1 TGTATTAATA-CAATACGTATA
*
2664586 TGTATTGATACAATACGTAT
1 TGTATTAATACAATACGTAT
2664606 TTTTACTTAA
Statistics
Matches: 18, Mismatches: 1, Indels: 2
0.86 0.05 0.10
Matches are distributed among these distances:
20 5 0.28
21 13 0.72
ACGTcount: A:0.39, C:0.10, G:0.12, T:0.39
Consensus pattern (21 bp):
TGTATTAATACAATACGTATA
Found at i:2670582 original size:474 final size:475
Alignment explanation
Indices: 2669556--2676908 Score: 8794
Period size: 474 Copynumber: 15.5 Consensus size: 475
2669546 GATCCTAACA
* * * *
2669556 ATCCTAATGAAGGGAATGTGCTTTTGGC-TC-CAATTCTCGTAAAGAACGGAGATTGTTATGAGA
1 ATCCTAATGAAGGGAATGTG-TTTTGGCTTCACAA-TCTTGTAAAGAACTGAGATAGTTACGAGA
* * * * * *
2669619 ATCAATGCTCGTCTTATTTAAGGGATAAACTTAGATTTTAAGGAAACTAGGGCAAAGAAAAGATT
64 ATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATT
*** * * * *
2669684 TTTGTACAAAAGAAAATCATCAATATCATTTATCCTTATAAGGAGAATGTGTTTATAATGCCTAA
128 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA
** *
2669749 TCACAAAATGAATGAAGATCATTACGGGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGAC
193 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGAC
* *
2669814 TTTACAAAAAATTGTGGGAAAAAAGCCTTTCTTGTGAAATGAAAGCATCAATATGATGTATCCTA
258 TTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCTA
* * *
2669879 CAGAGAAGACTATGTTTAT-GTTGCCTTATCCTGAAAAAAATGGGGATTAGTATGAGTATTCATA
323 AAGAGAAGACTATGTTTATAG-TGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATG
* * *
2669943 TTTGTCTTATTTAAGAGACTAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCATGC
387 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGC
* * * *
2670008 GACATCAAAGCATCACTGTCTTGT
452 GACACCAAAGCATCAATTTCATGT
* * * *
2670032 ATCTTAAAGAACGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAACTGAGATAGTTACGAGAAT
1 ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGTAAAGAACTGAGATAGTTACGAGAAT
* * *
2670097 CGATTCTTGTCTTATTTAAGGTATGAACATT-ATTTTAAAGGAAAATAGGCAAAGAAAAGATTTC
66 CGATGCTTGTCTTATTTAAGGGATGAACTTTGA-TTTAAAGGAAAATAGGCAAAGAAAAGATTTC
* * * * * *
2670161 CATGCAAAGGAAAATCATCAATATCATTTATCTTAATAAGAAAAATGTGTTTATAGTGCCGAATC
130 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC
*
2670226 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTTTTTTGAGGCACGAACTTAGACTT
195 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTT
* * ** *
2670291 TACAAAAAATGGTGTGAAAAAAGCCTTTCTTGCAAAATGAAAGTTTCAATATGATGTAT-CGAAA
260 TACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCTAAA
*
2670355 GAGAAGACTATGTTTGTAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTT
325 GAGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTT
* * * * *
2670420 GTCTTATTTAGGAGACAAACTTTGATTCTATCAAAAACAGTGGAAGGAAAAGTGTTTCTTGCCAT
390 GTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGAC
*
2670485 ATCAAAGCATCAATTTCATGT
455 ACCAAAGCATCAATTTCATGT
* * *
2670506 ATCCTAATGAAGGGATTATGTTTTGGCTTCACAATCTTG-AAATGAACTGAGACAGTTACGAGAA
1 ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGTAAA-GAACTGAGATAGTTACGAGAA
** * *
2670570 TCGATGCTTGTCTTATTTAATAGATGAACTTTGATTTAAAGGAAAATAGGGGAAA-AAAAGACTT
65 TCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATTT
* * * *
2670634 GCACGCAAAAAAAAAATCATCAATATCCTTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA
129 CCATGC-AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA
* * * *
2670699 TCACAAAATGAATGAAGATCATTACTAGAATTCATGTTTATCTTTTTTGAGGCA-TAGACTTAGA
193 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGA-ACTTAGA
* * *
2670763 CTTTACAAAATATGGTAGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCGT
257 CTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCT
* * *
2670828 AAAGAGAAGACTATGTTTAT-GATGCCTTATCCTAAAAAGAATGGGGATTAGAATGAGTTTTCAT
322 AAAGAGAAGACTATGTTTATAG-TGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCAT
* *
2670892 GTTTGTCTTATTTACGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAATGTTTTTTCTT
386 GTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAG-TTTTTCTT
* *
2670957 ACGACACCAAAGGATCAATTTCATGT
450 GCGACACCAAAGCATCAATTTCATGT
* * * ** * * *
2670983 ATCCAAATGAAGAGAATATGTTTTGGC-TCTGATTCTTGTAAAGAA-TGGAGATTGTTACAAGAA
1 ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGTAAAGAACT-GAGATAGTTACGAGAA
* *
2671046 TCGATGCTTGTTTTATTTAAGGGATTAAC-TTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTT
65 TCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATTT
* * * * *
2671110 CCATGGAAAAGAAAATCATCAATATCATTTATTCTAATAAGGAAAATGTGTTTATATTGCCTAAT
129 CCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAAT
* * * * *
2671175 CACAAAATGAATGAAGATCAATACTTGAATCTAGGTTTGTCTCTTTTGAAGCACGAACTTAGACT
194 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACT
* *
2671240 TTACAAAAAATGGTGGG-AAAAAGCCTTTCTTGCTAAACGAAAGCATCAATATGATGTATCCTAA
259 TTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCTAA
* * * * * *
2671304 TGAGAAGACAATGTTTATGGTGCC-TAACCTGGTAAAGAATGGGGATTAGTATGAATATTCATGT
324 AGAGAAGACTATGTTTATAGTGCCTTATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGT
2671368 TTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCG
388 TTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCG
*
2671433 AC-CCGAAAGCATCAATTCCATGT
453 ACACC-AAAGCATCAATTTCATGT
** ** ** * *
2671456 ATCCTAATGAAGGGAATGTGTTTTCAC-TC-TGATCCTCATAAAGGA-TGGAGATTGTTACGAGA
1 ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAAT-CTTGTAAAGAACT-GAGATAGTTACGAGA
*
2671518 ATCGATGCTTGTATTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATT
64 ATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATT
* * * * * * * *
2671583 TCCATTCCAAAGATAAGCATCAATATCCTTTATCATAATTAGGAGAATGTGTTTATACTGCCTAA
128 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA
* * * * * * * * *
2671648 CCACTAAATGCATGAAGATTATTACTAGAATCTATGTTTATCTCCTTTGTA-GTACGAACTTAAA
193 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTG-AGGCACGAACTTAGA
* *
2671712 CTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATAAAGTATCCT
257 CTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCT
* * * * * * *
2671777 AATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAA-GGGGATTAGTATAAGTATTCATG
322 AAAGAGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATG
*
2671841 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGTAAAAGTTTTTCTTGC
387 TTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGC
*
2671906 GATACCAAAGCATCAATTTCATGT
452 GACACCAAAGCATCAATTTCATGT
* ** * * * * *
2671930 ATCCTAATG-AGTGGATTGTGTTTTGGC-TCTGATTCTCGTAAA-AAATGGAGATTGTTATGAGA
1 ATCCTAATGAAG-GGAATGTGTTTTGGCTTCACAATCTTGTAAAGAACT-GAGATAGTTACGAGA
* * *
2671992 ATTGATGCTTATCTTATTTAAGGTATGAACTTTGATTTAAAGGAAAATAGTGCAAAGAAAAGATT
64 ATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAG-GCAAAGAAAAGATT
* * * * * *
2672057 TTCGTGCTGAAA-AAAATCATCAATATCATTTATCCTAGTGAGGAGAATGTGCTTATGGTGCCTA
128 TCCATGC-AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTA
* * * *
2672121 ACCACAATATGAATGAAGATCATTACTAGAATCAATGTTTGTCTCTTTTGAAGCACGAACTTAGA
192 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGA
* * * *
2672186 CTTTACAAAAAAT-ATGGGAAAAAAGCCTTTCTTGTGAAATGAAAGCATCAATTTGATGCATCCT
257 CTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCT
* * * *
2672250 AATGATAAGACTATGTTTAT-GTTGCCTTATCTTGAAAAGAAAGGGGATTAGTATGAGTATTCAT
322 AAAGAGAAGACTATGTTTATAG-TGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCAT
* * * * * *
2672314 ATTTGTCGTATTTAAGAGACAAACTTTAATTCTATCCAAAATGTTGGAAGGAAAAGTTTTT-TGT
386 GTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCT-T
* **
2672378 GCGACATCAAAGCATCAAAGTCATGT
450 GCGACACCAAAGCATCAATTTCATGT
* * * *
2672404 ATCCTAAAGAAGGGAATGTGTTTTGGCTTCACAATCTTG-AAATGATCTGAGACAGTTACAAGAA
1 ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGTAAA-GAACTGAGATAGTTACGAGAA
* * * * *
2672468 TCGATTCTTGCCATATTTTAAGGTATGAACATT-ATTTTAAAGGAAAATAGGCAAAGAAAAGATT
65 TCGATGCTTGTCTTA-TTTAAGGGATGAACTTTGA-TTTAAAGGAAAATAGGCAAAGAAAAGATT
2672532 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA
128 TCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAA
* * * * * * *
2672597 TCATAAAATGAATGAAGATCATTACTAGAATCCACGTTTATCCCATTTAAGGCACGAACTTACAC
193 TCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGAC
* * * * * *
2672662 TTTACAAAATATGGTGGGGAAAAAGCCTTTCTTGCGAAACGAAAACTTCAACATGATGTATCCTA
258 TTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCTA
* *****
2672727 AAGAGAAGACTATGTTTATAGTGCCTTATCCTGAATAGAACAATTATTAGTATGAGTATTCATGT
323 AAGAGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGT
* * * * * * *
2672792 TTGTCTTATTTAAAAGACAAACTTTGATTATATCAAGAATGGTGAAAGGAAAAGTTTTTTTTGTG
388 TTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCG
** *
2672857 ACATTAAAGCATCAATTTCATAT
453 ACACCAAAGCATCAATTTCATGT
* * * * * * *
2672880 ATCCTAATTAAGGGAATGAGTTTTGGCTTCATAATCTTGAAAAAAACTAAGACAGTTACGAGAAT
1 ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGTAAAGAACTGAGATAGTTACGAGAAT
* * *
2672945 CGATGCTTGTCTTATTTAAGGGATGAACTTTGAATTAAGGGAAAATTGGGCAAAGAAAAGATTTC
66 CGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAA-TAGGCAAAGAAAAGATTTC
* ** * *
2673010 CAAGTGAAAGAAAATCATCAATATCATTTATCCTACTGAGGAGAATGTGTTTATAGTGCCTAAAC
130 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC
* * * * * *
2673075 ACAAAATGAACGAAGATCATTACTAGAATCCAAGTTTGTCTCATTTAAAGCACAAACTTAGACTT
195 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTT
* * * * * * *
2673140 TACAAAAAAAGGTGGGAAAAATGTCTTTCATGCGAAATGAAAGCTTCAATATGATGTATCCCAAT
260 TACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCTAAA
* * * *
2673205 GAGAAGACAATGTTTATTGTGCCTTATCCTGAAGAGAATGGGGATTAGTATGAGTTTTCATGTTT
325 GAGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTT
* * * *
2673270 GTCTTA-TTAGGAGACAATCTTTGATTCTAACAAAAACGGTGGAAGGAAAA-TTTTTCTTGCAAC
390 GTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGAC
2673333 ACCAAAGCATCAATTTCATGT
455 ACCAAAGCATCAATTTCATGT
* * * ** * * *
2673354 ATCCAAATGAAGAGAATATGTTTTGGC-TC-TGATTTTCGTAAAGAA-TGGAGATTGTTAAGAGA
1 ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTT-GTAAAGAACT-GAGATAGTTACGAGA
* *
2673416 ATCGATGCTTGTTTTATTTAAGGGATGAACTTTGATTTAAAAGAAAATAGGGCAAAGAAAAGATT
64 ATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATT
* * * * * * * *
2673481 TCAATTG-AAAAGAAAATCATTAATATCGTTTATCATAATGAGGAGAACGTTTTTCTACTG-CTA
128 TCCA-TGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTA
* * * * *
2673544 ACCA-AAAATTAAATGAAGATCATTACTAAAATCCATGTTTGTCTCTTTTGAAGCACGTACTTAG
192 ATCACAAAA-TGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAG
* *
2673608 ACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGAATCAATTTGATGTATCC
256 ACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCC
* * * * * *
2673673 TAATGAGAAGACAATGTTTATGGTGACC-AATCCAGAAAAGAATGGGGATTAGTATAAGTATTCA
321 TAAAGAGAAGACTATGTTTATAGTG-CCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCA
* * * * * *
2673737 TGTTTGTCTTATTTATGA-ATGGAGATTGTTACGACACCAATCTATCAAAAACAGTGGAAGGAAA
385 TGTTTGTCTTATTTAAGAGA--CAAACT-TT--G-----ATTCTATCAAAAACGGTGGAAGGAAA
*
2673801 AGTTTTTCTTGCGACACC-AA-CCTCAATTTCATGT
440 AGTTTTTCTTGCGACACCAAAGCATCAATTTCATGT
** * * *
2673835 ATCCTAATGAA-GGAATTGTGTTTTGGC-TCTGATTCTTGTAAAGAATTGAGATTGTTACGAGAA
1 ATCCTAATGAAGGGAA-TGTGTTTTGGCTTCACAATCTTGTAAAGAACTGAGATAGTTACGAGAA
* * * * *
2673898 TCGGTGCTTGTTTTATTTAAAGGATAAACTTTGATTTAAAAGAAAATAGGCAAAGAAAAGATTTC
65 TCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTC
* * * *
2673963 CACGCAAAGGAAAATCATCAATATCATTTATCCTAATAAGGAGAATGTGTTCATAGTGCCGT-AT
130 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCC-TAAT
*
2674027 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTAAGGCACGAACTTAGACT
194 CACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACT
* * * * * * * *
2674092 TGACAAAAAATGGTGTGAAAAAAGTCTTTCTTGTGAAACGAAAGCTTTAATGTGATGTATCCTAA
259 TTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCTAA
* * * * * * *
2674157 AGAGAAGACTATATTTATAGTGCCTTATCTTGAAAAAAATGAGGATTTGTCTAAGTATTCATGTT
324 AGAGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTT
* * * * * * * *
2674222 CGTCTTATTTGAGAGATAAACTTTGATTATATCAAGAATGGTGGAAAGAAAAGTTTTTCTTGTGA
389 TGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGA
* * * *
2674287 TATCAACGCATCAATTTCATAT
454 CACCAAAGCATCAATTTCATGT
* * * * * *
2674309 ATCCTAAAGAAGGGAATGAGTTTTGGCTTCACAATCTTGAAAATAACTAAGACAGTTACGAGAAT
1 ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGTAAAGAACTGAGATAGTTACGAGAAT
* ** * * *
2674374 CGATGCTTTTCTTACATAAGGGGTGAACTTTGATTTAAATGAAAATAGGCAAAAAAAAGATTTCC
66 CGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCC
* * *
2674439 ATGCAAAAGAAAATCGTCAATATC-TTATATCCTAATGAGGAGAATGTGTTTATAGTGTCTAATG
131 ATGCAAAAGAAAATCATCAATATCATT-TATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC
* * * * * *
2674503 AC-AAATCGAATGAAGATCATTATTAGAATTCAAGTTTGTCTCATTTGA-GCTGCGAACTTAAAC
195 ACAAAAT-GAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGC-ACGAACTTAGAC
** * * * * *
2674566 TTTACAAAATTTGGTGGGAAAAAAGCCTTTTTTGTGAAACGAAAGCTTCAATATGATGTGTCCTA
258 TTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCTA
* * * * * *
2674631 AAGAGAAGACTATGTTAAGAGTGTCGTATCTTGAAAAGAATGGGGATTAGTATGAGTATTCATTT
323 AAGAGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGT
*
2674696 TTGTCTTA-TT--GAGACAAACTTTGATTCTATCAAAAACGGTGAAAGGAAAAGTTTTTCTTGCG
388 TTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCG
* *
2674758 ATACCAAAGCATTAATTTCATGT
453 ACACCAAAGCATCAATTTCATGT
* * *
2674781 ATCCTAATAAAGGGAATGTGCTTTTGGC-TC-CAAT-TATCGTAAAGAA-TGGAGATTGTTAAGA
1 ATCCTAATGAAGGGAATGTG-TTTTGGCTTCACAATCT-T-GTAAAGAACT-GAGATAGTTACGA
* *
2674842 GAATCAATTCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGA
62 GAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGA
* * * *
2674907 TTTCCATACAAAAGGAAATCATCAATATCATTTATCCTAATGAGAAGAATGTGTTTATAGTACCT
126 TTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCT
** *
2674972 AATCACAAAATGAATGAAGATCATTGTTTGAATCCATGTTTGTCTCTTTCTGAGGCACGAACTTA
191 AATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTT-TGAGGCACGAACTTA
* * * *
2675037 GATTTTACAAAAAACGGTGGGAAAAAAGCCTTT-TTGCGAAACGAAAGCATCACTATGATGTATC
255 GACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATC
* * * * * * * * * *
2675101 CCAATGAGAAGGCAATGTTTATGGTGCCTAATCCAGAAAAAAATAGGGATTTGTATGAGTATTCA
320 CTAAAGAGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCA
* * * *
2675166 TGTTTGTCATATTTAAGAGATAAACTTTGATTCCATCAAAAACGGTGGAAGGAAAAGTTTTTCGT
385 TGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTT
* * * *
2675231 GTGACATCAAAGCATTAATGTCATGT
450 GCGACACCAAAGCATCAATTTCATGT
* *
2675257 ATCCTAAAGAAGGGAATGTGTTTTGGCTTCACAATCTTGAAAAGAACTGAGATAGTTACGAGAAT
1 ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGTAAAGAACTGAGATAGTTACGAGAAT
* * * * * * * *
2675322 CAATTCTTGTCTTATTTATGGTATGAACATTGTTTTAAAGGAAAATAGGCGAAGAAAAGATTTTC
66 CGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCC
** * *
2675387 ATGCAATGGAAAATCATCAATATCATTTATCCTAATCAGGAGAATGTGTTTATAGTGCCTAACCA
131 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCA
** * * * *
2675452 CAAAATGAATGAAGATCATTACTCTAATCCACGTTTGTCTCATTTGAGGCATGAACTTAGTCTTT
196 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTT
* * * * * *
2675517 ACAAAATATGGTGGGAAAAAAGCC-ATCTTACGAAACGAAAGCTTCAATATGATGTATCCTAAAA
261 ACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCTAAAG
* * ** ***
2675581 ATATGACTATGTTTATAGTGCCTTATCCTGAAAAGAGCGATTATTAGTATGAGTATTCATGTTTG
326 AGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTG
* * * *
2675646 TCTTATTTAAGAGATAAACTTTGATTATATCAAGAACGGTGGAAGGAAAAGTTTTTCTTGTGACA
391 TCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACA
** *
2675711 TTAAAGCATCAATTTCATAT
456 CCAAAGCATCAATTTCATGT
* * * * *
2675731 ATCCAAATGAAAGGAATGAGTTTTGGCTTCACAATCTTGAAAAGAACTGAGATAGTTATGAGAAT
1 ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGTAAAGAACTGAGATAGTTACGAGAAT
* * **
2675796 CAATGCTTGTCTTATTTAAGGGATGAACTTTGAATTAAAGGAAAATAGGTGAAGAAAAGATTTCC
66 CGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCC
* *
2675861 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTTTTTATAGTGCCTAATAA
131 ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCA
* * *
2675926 CAAAACGAATGAAGATCATTACTAGAATCCAAGTTTGTCTC-ATTGAGGCACGAACTTAGACTTT
196 CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTT
** * * * * * *
2675990 ACAAAATTTGGTGGGAAAAAAGTCTTTCTTGCAAAATGAAAGCTTCAACATGATGTCTCCTAAAA
261 ACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCTAAAG
* * * * *
2676055 AAAAGACTATCTTTATACTGCCTTATCCTAAAAAGAATGGGGATTAGTATGAGTATTCATTTTTG
326 AGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTG
* * * * ** *
2676120 TCTTATTGATGACACAAACTTTCATTCTATCAAAAATTGTGGAAGGAAGAGTTTTTCTTGCGACA
391 TCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACA
*
2676185 CCAAAGCATTAATTTCATGT
456 CCAAAGCATCAATTTCATGT
* * * * *
2676205 ATCCT-ATGAAGGCAATGTGCTTTTGGC-TC-CGATTCTCGTAAAGAA-TGGAGATTGTTAAGAG
1 ATCCTAATGAAGGGAATGTG-TTTTGGCTTCAC-AATCTTGTAAAGAACT-GAGATAGTTACGAG
* * * *
2676266 AATCGATTCTTGTCTTATTTAAGAGATAAACTTTAATTTAAAGGAAAATAGGGCAAAGAAAAGAT
63 AATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGAT
* *
2676331 TTCCATGCAAAAGAAAATCATCAATATCATTTATCGTAATGAGGAGAATGTGTTTATAGTACCTA
127 TTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTA
* * * * * *
2676396 AACACAAAATGAATGAAGATCATTACTTGAATCCATGTTTGTCCCTTTTGAAGTACAAACTTAGA
192 ATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGA
2676461 CTTTACAAAAAATGGTGGG-AAAAAGCCTTT-TT------T----GCATCAATATGATGTATCCT
257 CTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCT
* * * *
2676514 AATGAGAAGACAATGTTTATGGTGCCTAATCC-GAAAAAGAATGGGGATTAGTATGAGTATTCAT
322 AAAGAGAAGACTATGTTTATAGTGCCTTATCCTG-AAAAGAATGGGGATTAGTATGAGTATTCAT
* * * * * *
2676578 ATTTGTCTTGTTTAAGAGATAAGCTTTGATTCTATCAAAAACGGTGAAAGGAAAAGTTTTTCTTA
386 GTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTG
2676643 CGAC-CCTAAAGCATCAATTTCATGT
451 CGACACC-AAAGCATCAATTTCATGT
* * * * ** *
2676668 ATCCTAATGAAGGGAATATGTTTTGGCTTCACATTCTTGAAAAGAACTGAGACAAATACAAGAAT
1 ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGTAAAGAACTGAGATAGTTACGAGAAT
* * * * * * * *
2676733 CGATTCTTGTCTTTTTTATA-GTATGAGCATTGTTTTAAAAGAAAATAGGCAAAGAAAAGATTCC
66 CGATGCTTGTCTTATTTA-AGGGATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTC
* * *
2676797 CATGCCAAA-AAAATCATCAATATCGTTTATCCTAATGAGGAGAATTTGTTTATAGTGCCTAATC
130 CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC
* *
2676861 ACAAAATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTCATTTGA
195 ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGA
2676909 AGCATCAATA
Statistics
Matches: 5903, Mismatches: 862, Indels: 238
0.84 0.12 0.03
Matches are distributed among these distances:
462 96 0.02
463 180 0.03
464 73 0.01
465 3 0.00
467 1 0.00
470 1 0.00
471 10 0.00
472 367 0.06
473 652 0.11
474 1842 0.31
475 1280 0.22
476 925 0.16
477 71 0.01
478 1 0.00
479 3 0.00
480 69 0.01
481 278 0.05
482 36 0.01
483 15 0.00
ACGTcount: A:0.37, C:0.13, G:0.19, T:0.32
Consensus pattern (475 bp):
ATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGTAAAGAACTGAGATAGTTACGAGAAT
CGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCC
ATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCA
CAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAGGCACGAACTTAGACTTT
ACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGAAAGCATCAATATGATGTATCCTAAAG
AGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTG
TCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACA
CCAAAGCATCAATTTCATGT
Found at i:2677509 original size:158 final size:155
Alignment explanation
Indices: 2676908--2684396 Score: 902
Period size: 158 Copynumber: 47.2 Consensus size: 155
2676898 GTCTCATTTG
* * * * * * *
2676908 AAGCATCAATATGATGTATCCTAATGAGAAGACTATGTTTATGTTGCCTTATCTTGGAAATAATG
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATC-AGAAAAGAATG
* * * * *
2676973 GGGATTAGTATGAGTATTCATATTAGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGA
65 GAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA-CAAAAATGG
** *
2677038 T-GGAAGGAAAAGTTTTTCTTGCAACATCA
128 TGGGAA-GAAAAGCCTTTCTTGCAA-AACA
* * ** * *
2677067 AAGCATCAATGTCATATATCCTAA--AGAAGGGAATGTGTT-TTG-GCCTCACAATCTTGAAAAG
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TTATGGTGCCT---AATC-AGAAAAG
* * * * ** * * *
2677128 AACT-GAGA-CAGTTACGTGAATCGAT-TCTTGTCTTATTTAAG-GTATGAACATTG-TTTTAAA
61 AA-TGGAGATTAG-TATGAGATTC-ATGT-TTGTCTTATTTAAGAG-ACAAACTTTGATTCTACA
* ** ** * *
2677188 GGAAAATAG-GCTAAGAAAA-TATTTCCATGCAAAAGA
121 --AAAATGGTGGGAAGAAAAGCCTTT-CTTGCAAAACA
* * * * * * *
2677224 AACTCATCAATTTCATTTATCCTAATGAGAGGA-ACGTGTTTATAGTGCCTAATCAAAAAATGAA
1 AA-GCATCAATATCATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATCAGAAAA-GAA
* * * * * * *
2677288 TGAAGATCATTACT-AGAATAT-GTGTTTGTCTTTTTTGAG-GCACGAA-TTTAGACTT-TACAA
63 TGGAGATTAGTA-TGAG-AT-TCATGTTTGTCTTATTTAAGAG-ACAAACTTT-GA-TTCTAC-A
*
2677348 AAAATGGTGGGAA-AAAAGCCTTTCTTGCGAAACA
121 AAAATGGTGGGAAGAAAAGCCTTTCTTGCAAAACA
* * *
2677382 ATAGCATCAATATGATGTAACCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAAT
1 A-AGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAA-TCAGAAAAGAAT
* *
2677447 GGGGATTAGTATGAGCATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACG
64 GGAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA-CAAAAATG
* ** **
2677512 AT-GGAAGGAAAAGTTTTTCTTGCAACCCCA
127 GTGGGAA-GAAAAGCCTTTCTTGCAA-AACA
* ** * ** * * * * * *
2677542 AAGCATCAATTTCATGTA-CCCCAT-ATAAGGGAATTTCTTTTGGCT-CCGATTCTCGTAAAGAA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TTATGG-TGCCTAATC-AGAAAAGAA
** * * * * * ** * *
2677604 TGGAGATTCTTACGAGAATCGATGCTTATTTTATTTAAGAGATGAACTTTCATT-TAAAGGAAAA
63 TGGAGATTAGTATGAGATTC-ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTACA--AAAA
** ** * *
2677668 TAGG-GCAAAGAAAAGATTTTCATGCAAAAGAA
125 T-GGTGGGAAGAAAAGCCTTTCTTGCAAAA-CA
* * * * * * *
2677700 AATCATCAATATCATTTATCCTCATGAG--GAGAATGTGTTCGTAGTGCCTAATCACAAAATGAA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TT-ATGGTGCCTAATCAGAAAA-GAA
* * * * * * *
2677763 TGAAGATCATTACT-AGAATCTATGTTTGTCTCT-TTTGAAG-CACGAACTTAGA--CTACAAAA
63 TGGAGATTAGTA-TGAGATTC-ATGTTTGTCT-TATTT-AAGAGACAAACTTTGATTCTAC-AAA
** * *
2677823 AAAAGTGGG-A-AAAGGCCTTTCTTGCAAAATGA
123 AATGGTGGGAAGAAAAGCCTTTCTTGCAAAA-CA
* * * *
2677855 AAGCATCAATATGATGTATCCTTATGAGAAGACAATATTTATGGTGCCTAATCCGGAAAAGAATA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CAGAAAAGAAT-
* *
2677920 GG-GATTAGTATGAGTATCCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCAAAAATG
64 GGAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA-CAAAAATG
* ** * * *
2677984 G-AGGAAGGAAAAGTTTTTCTTGTGACATCA
127 GTGGGAA-GAAAAGCCTTTCTTG-CAAAACA
* ** * *
2678014 AAGCATCAATTTCATGTATCCTAAT--GAAGGGAATGAGTTT-TGGCTTCAC-AATCTTGAAAAG
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAAT--GTTTATGG-TGC-CTAATC-AGAAAAG
* * * * * * ** *
2678075 AATTGAGA-CAGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATT-TAAAGGA
61 AATGGAGATTAG-TATGAGATTC-ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTACA--A
* * * * * *
2678138 AAAT-ATGGCAAAGAAAAG-ATTTCCATACAAAAGAA
122 AAATGGTGG-GAAGAAAAGCCTTT-CTTGCAAAA-CA
* * * * * *
2678173 AATCATCAATATCATTTATCCTACA-GAGGAA-A-ATGTGTTTATAGTACCTAATCACAAAATGA
1 AAGCATCAATATCATGTATCCTA-ATGA-GAAGACA-ATGTTTATGGTGCCTAATCAGAAAA-GA
* * * * * * * * * * *
2678235 ATGAAGATCATTACT-AGAATCCATGTTTGTCTCT-TTTGAAG-CACGAGCTTAGACTATAAAAA
62 ATGGAGATTAGTA-TGAG-ATTCATGTTTGTCT-TATTT-AAGAGACAAACTTTGATTCT-ACAA
* **
2678297 AAATAGTGGGAA-AAAAGCCTTTCTTGCGAAATGA
122 AAATGGTGGGAAGAAAAGCCTTTCTTGC-AAAACA
*
2678331 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATGCAGAAAAGAATG
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CAGAAAAGAATG
* * * * * * ** *
2678396 GGGATTAGGATAAGTATTCATGTTTGT-TCTATTTAAGTGACAAACTTTGATCCCATGTAAAATA
65 GAGATTAGTATGAG-ATTCATGTTTGTCT-TATTTAAGAGACAAACTTTGATTCTA-CAAAAATG
* * *
2678460 GTGGAAAGAAAAGCTTTTCTTGCAACACCA
127 GTGGGAAGAAAAGCCTTTCTTGCAA-AACA
** * * * * * * * *
2678490 AAGCATCAATGGCATCTATCATAATGAG-GGA-ATATGTTT-TGGCTTCCCAAGCATTAAAAAAA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACA-ATGTTTATGG-TGCCTAATCA-GAAAAGAA
* * * * * * * * ** *
2678552 TGTAGATT-GTTACGAGAATCAATGCTTCTCATATTTTAGGGATGAACTTTGATTTTACAAAAAA
63 TGGAGATTAG-TATGAGATTC-ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTAC-AAAAA
* * * * *
2678616 TAG-GGCATAGAAAAG-ATTTCCATGCAAAAAA
125 TGGTGGGA-AGAAAAGCCTTT-CTTGCAAAACA
* * * ** * *
2678647 AATCATTAATATCATTTATCCTAATGAG--GTGAATGTGCTTATAGTGCCTAATCACAAAAGGAA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT--TTATGGTGCCTAATCAGAAAA-GAA
* * * * *
2678710 T-GATGATCACTGCTA-GA-ATCCATGTTTGTCTCT-TTTAA-AGCACAGACATAGACTT-TACA
63 TGGA-GATTA--G-TATGAGATTCATGTTTGTCT-TATTTAAGAG-ACAAACTTTGA-TTCTAC-
2678769 AAAAATGGTGGGAA-AAAAGCCTTTCTTGCAAAACGA
120 AAAAATGGTGGGAAGAAAAGCCTTTCTTGCAAAAC-A
* * * * *
2678805 AAGCATCAATATGATGTATCCTAATGAAAAGACAATGTTTACGGTGCCTAATTCGGAAAAGAGTG
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAA-TCAGAAAAGAATG
* * * *
2678870 GGGATTCGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
65 GAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA-CAAAAATGG
** * * *
2678935 T-GGAAGGAAAAGTTTTTCTTGGGACATCA
128 TGGGAA-GAAAAGCCTTTCTT-GCAAAACA
* * ** * * * *
2678964 AAGCATCAATGTCTTGTATCCTAAT-A-AAGGGAATTTGTTT-TGGCTTCAC-AAGCTTGAAAAA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAA--TGTTTATGG-TGC-CTAATC-AGAAAAG
* * * ** * *
2679025 AACT-GAGA-CAGTTACGAGAATTGAT-TCTTGTCTTATTTAAG-GTATGAAC--AGCATTCTAA
61 AA-TGGAGATTAG-TATGAG-ATTCATGT-TTGTCTTATTTAAGAG-ACAAACTTTG-ATTCTAC
* ** * * * *
2679084 AGGAAAATAG-GCAAAGAAAAG-ATTTCCATGGGAAAAAA
120 A--AAAATGGTGGGAAGAAAAGCCTTT-C-TTGCAAAACA
* * * ** * *
2679122 AATCATCAATATCATTTATCCTAATGAG--GAGAATGCGTTTATAATGTCTAATCACAAAATGAA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAAT--GTTTATGGTGCCTAATCAGAAAA-GAA
* * * * * *
2679185 TGAAGATCATTACTAT-A-ATCCATGTTTGTCTCT-TTTGAAGCG-CGAACTTAGACTT-TACAA
63 TG--GA-GATTAGTATGAGATTCATGTTTGTCT-TATTT-AAGAGACAAACTTTGA-TTCTAC-A
* *
2679245 AAAATGGTGGGAA-AAAAGCGTTTCTTGCGAAACGA
121 AAAATGGTGGGAAGAAAAGCCTTTCTTGCAAAAC-A
* * * * * * * * * *
2679280 AAGCATCAATATGATGTATTCTAAAGAGAAGACTATGCTTATAGTGTCTTATCCTGAAATGAATG
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CAGAAAAGAATG
* * * * * *
2679345 GGGAGTAGTATGAGTATTCAGGTTTGTCTTATTGAAAAGACAAACTTTGATTCTATCAAAAACGG
65 GAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA-CAAAAATGG
* ** * * *
2679410 TGGAAAGAAAAGTTTTTCTAGCGACATCA
128 TGGGAAGAAAAGCCTTTCTTGC-AAAACA
* ** * * * *
2679439 AAGCATCAATGTCATGTATCCTAAT--GAAGGGAATTTGTTAT-G-GCTTTA-CAG---A-ACT-
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TTATGGTGCCTAATCAGAAAAGAATG
* * * * *
2679494 GAGA-CAGTTACGAGAATTAAT-TCTTGTCTTATTTAAGGTATGA-AAA--TTG-TTTTAAAGGA
65 GAGATTAG-TATGAG-ATTCATGT-TTGTCTTATTTAA-G-A-GACAAACTTTGATTCTACA--A
* ** * * * ** *
2679553 AAATAG-GCAAAGAAGAG-ATTCCCAAGCAAAAGA
122 AAATGGTGGGAAGAAAAGCCTT-TCTTGCAAAACA
** * * * *** * *
2679586 AGATTATCAATATCATTTATCCTAATGCGGAGATTGTGTTTATAGTGCCTAATCACAAAATGAAT
1 A-AGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCAGAAAA-GAAT
** * * ** * * * * **
2679651 AAATATTATTACCAGAATCCAGGTTTGTCTCT-TTT--GAGGCATGAACTTAGACTT-TGGAAAA
64 GGAGATTAGTATGAG-ATTCATGTTTGTCT-TATTTAAGAGACA--AACTTTGA-TTCTACAAAA
* * * **
2679712 ATTGGTAGGAA-AAATGCCTTTCTTGTGAAATGA
124 A-TGGTGGGAAGAAAAGCCTTTCTTG-CAAAACA
* * * * **
2679745 AAGCATCAATATGATGTAACGTAAAGAGAAGA-ATATGTTTATGGTGCCTTACCCTA-AAAAGAA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCC-TAATC-AGAAAAGAA
* * * * *
2679808 TGGGGATTAGTTTGAGGATTCATGTTTATCTTATTTAAGAGACAAACGTTGATTCTATCAAAAAC
63 TGGAGATTAGTATGA-GATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA-CAAAAAT
** * ***
2679873 GGT-GGAAGGAAAAGTTTTTCTTACGACCCCA
126 GGTGGGAA-GAAAAGCCTTTCTTGC-AAAACA
* ** * * * *
2679904 AAGCATCAATTTCATGTATCCTAAT--GAAGGGAATGTGTTTTGGAT--CTGATTCTCGTAAAGA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TTATGG-TGCCT-AATC-AGAAAAGA
* * * * * ** *
2679965 ATGAAGATTACTATGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATT-TAAAGGAAA
62 ATGGAGATTAGTATGAGATTC-ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTACA--AAA
** * * * *
2680029 ATAGG-GCAAAGAAAAG-ATTTCATGGAAAAGAA
124 AT-GGTGGGAAGAAAAGCCTTTCTTGCAAAA-CA
** * * *** ** *
2680061 AATTATCAATATCATTTATCCTAATGAGTAGATTGTGTTTATTATGCCTAATCACAAAATGAATG
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCAGAAAA-GAATG
* * * * * * * * **
2680126 AATATCATTACT-AGAATCCATGTTTGTCTTTTTTGAAG-CACGAACTTAAACTT-TACAAAAAT
65 GAGATTAGTA-TGAG-ATTCATGTTTGTCTTATTT-AAGAGACAAACTTTGA-TTCTACAAAAA-
* * *
2680188 TGGTAGGAA-AAAATCCTTCCTTGCAAAACAA
125 TGGTGGGAAGAAAAGCCTTTCTTGCAAAAC-A
* * * * * *
2680219 AAGCATCAATATGATGTGTCCTAAGGAGAAGACATTGTTTATGGTGCCTAATTCGGAAAAGATTC
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAA-TCAGAAAAGAAT-
* * *
2680284 AGGA-A-TAGTATGAGTATTCATGTTTGTCTTATTTTAGAAATAAACTTTGATTCTATCAAAAAC
64 -GGAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA-CAAAAA-
* * * *
2680347 AGG-GGAAAGAAAAGCTTTTCTTGCAACATCA
125 TGGTGGGAAGAAAAGCCTTTCTTGCAA-AACA
* ** * * *
2680378 AAGCATCAATGTCATGTATCCTAAT--GAAGGGAATGTGTTTTGGCTTCAC-AATTATGAAAAGA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TTATGG-TGC-CTAATCA-GAAAAGA
* * * * * * *
2680440 ACT-GAGA-CAGTTACGAGAATCGAT-TCTTATCTTATTTAAG-GAACGAACATTG-TTTTA-AA
62 A-TGGAGATTAG-TATGAGATTC-ATGT-TTGTCTTATTTAAGAG-ACAAACTTTGATTCTACAA
* ** * *
2680499 GGAAA--GTAGGCAAAGAAAAGATTTTCATGCAAAAAA
122 --AAATGGT-GG-GAAGAAAAGCCTTTCTTGCAAAACA
* * * * * * *
2680535 AATCATCATTATCATTTATCCTAATGAGATGA-ATGTGTTTATAGTGCCTAATCACAAAATGAAT
1 AAGCATCAATATCATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATCAGAAAA-GAAT
* * * * * * * * * *
2680599 -GAGGATCATTATTAGAATCCAGGTTTGTTTTTTTTTAG-GCACGAACTTAGACTT-TACAAAAA
64 GGA-GATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCTAC-AAAA
* ** * * **
2680661 AAGAGTAAGAA-AAAAGCCTTTTTTGTGAAATGA
124 ATG-GTGGGAAGAAAAGCCTTTCTTG-CAAAACA
* * * * * **
2680694 ATGCATCAATA-CGATGTATCGTAAAGAGAAGACTATGTTTATGGTGCCTTATCCTCAAAAGAAT
1 AAGCATCAATATC-ATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CAGAAAAGAAT
* * * *
2680758 AGG-GATTAGTATGAGTGTTCATGTTTATCTTATTTAAGAGACAAACTTTGATTCTATAAAAAAC
64 -GGAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA-CAAAAAT
* * * **
2680822 GG-CGTAAGGAAAAG-TTTCTCTTGCAATCCCA
126 GGTGGGAA-GAAAAGCCTT-TCTTGCAA-AACA
* * * * *
2680853 AAGCATCAATTTCATGTATCCTAATGA-AAG-GAATGTGTTTTGGCT-CC-AATTCTCGTAAAGA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TTATGG-TGCCTAA-TC-AGAAAAGA
* * * * ** *
2680914 ATGGAGATT-GTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATT-TAAAGGAA
62 ATGGAGATTAG-TATGAGATTC-ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTACA--AA
** * * *
2680977 AATAGG-GCAAAGAAAAG-ATTTCCATG-AAAAGA
123 AAT-GGTGGGAAGAAAAGCCTTT-CTTGCAAAACA
* * * * * * *
2681009 AATTCATCAATATCATTTATCCTAATGAGGAGA-ATGTGTTTATAGTGTCTAA-CAACAAAATGA
1 AA-GCATCAATATCATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATC-AGAAAA-GA
* * * * * * *
2681072 ATGAAGATCATTACT-AGAATCCATGTTTGTCTCT-TTTGAAG-CACGAACTTAGACTT-TACAA
62 ATGGAGATTAGTA-TGAG-ATTCATGTTTGTCT-TATTT-AAGAGACAAACTTTGA-TTCTACAA
* * ** * **
2681133 AAATTGGT-TGAAAAAAATTCTTTTTTGCGAAATGA
122 AAA-TGGTGGGAAGAAAAGCCTTTCTTGC-AAAACA
* ** * * * *
2681168 AAGCATCAATATGATGCGTCCTAATGAGAAGATAGTGTTTATGGTGCCTAATCTGGAAAAGATTA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATC-AGAAAAGAAT-
* * *
2681233 GG-GATT-CTATGAGTATTCATGTTTG-CTTTATTTAAGAGATAAACTTTGATTCTATCAAAAAC
64 GGAGATTAGTATGAG-ATTCATGTTTGTC-TTATTTAAGAGACAAACTTTGATTCTA-CAAAAAT
* * * ****
2681295 GG-GAGAAAGAATAGCTTTTCTTGCGACTTTA
126 GGTG-GGAAGAAAAGCCTTTCTTGC-AAAACA
* * ** ** * * * * *
2681326 AAGCATCAATGTAATACATCCTAAT--GAAGGGAATGTGTT-TAGACTTCATAGTCCTGAAAAGA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TTAT-G-GTGCCTAAT-CAGAAAAGA
* * * * * ** *
2681388 ACT-AAGATT-GTTAGGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATT-TAAAGGA
62 A-TGGAGATTAG-TATGAGATTC-ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTACA--A
** ** * *
2681450 AAATAGG-GCAAAGAAAAGATTTTCGTGCAAAAGAA
122 AAAT-GGTGGGAAGAAAAGCCTTTCTTGCAAAA-CA
* * * * * * * *
2681485 AATCATCAATATCATTTATCCTAATGTGGAGA-ATGTGTTTATAGTGCCTAATGACAAAATGAAT
1 AAGCATCAATATCATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATCAGAAAA-GAAT
* * * * * ** * * *
2681549 GAAGATCATTACT-AGAATCCATGTTTATCTCT-TTTGAAG-CTCGAACTTAGATTTTACAAAAA
64 GGAGATTAGTA-TGAG-ATTCATGTTTGTCT-TATTT-AAGAGACAAACTTTGATTCTACAAAAA
** **
2681611 TTGGAT-GG-A-AAAATTCTTTCTTGCGGAACGA
125 -TGG-TGGGAAGAAAAGCCTTTCTTGCAAAAC-A
* * * * * * *
2681642 ACGCATCAATATGATGTGTCCTAATGAGAAGACAGTGCTTATGGTGGCTAATCCAGAAAAGACTG
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CAGAAAAGAATG
* * * ** *
2681707 GGGATTAGTATGAGTATTCATGTTTGCCTTATTTAAGAGATAAACTTCAATTCTATCAAAAACAG
65 GAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA-CAAAAA-TG
* * * * * * *
2681772 G-GGAAAGAATAGCTTTTCCTACGACATCA
127 GTGGGAAGAAAAGCCTTTCTTGC-AAAACA
* * * ** * * *
2681801 ACGCATCAAT-TAATGTATCTTAAT--GAAGGGAATGTGTTTTGGCTTCAC-AATCGTGAAAAGA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TTATGG-TGC-CTAATC-AGAAAAGA
* * * * * * *
2681862 ACT-GAGATT-GTTACGAGAATCGATTTTTATCTTATTTAAG-GTACAAACATTG-TTTTAAAGG
62 A-TGGAGATTAG-TATGAGATTC-ATGTTTGTCTTATTTAAGAG-ACAAACTTTGATTCTACA--
* ** * * * *
2681923 AAAATAG-GCAAAGAAAAG-ATTCCCATGCAAAAGAA
121 AAAATGGTGGGAAGAAAAGCCTT-TCTTGCAAAA-CA
* * * * * * * *
2681958 AATCATCATTGTCATTTATCCTAATGAGATGA-ATGTGTTTATAGTGCCTAATCACAAAATGAAT
1 AAGCATCAATATCATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATCAGAAAA-GAAT
* * * * * * * *
2682022 GAAGATCATTACT-AGAATCCAAG-TTGTCTCT-TTTGAG-GCACAGACTTAGACTT-TACAAAA
64 GGAGATTAGTA-TGAG-ATTCATGTTTGTCT-TATTTAAGAG-ACAAACTTTGA-TTCTACAAAA
* * **
2682082 TTTGGGGGGAA-AAAA-CCTTTCTTATG-AAATGA
124 -ATGGTGGGAAGAAAAGCCTTTC-T-TGCAAAACA
* * * * * * * **
2682114 AAACGTCAATATGATGTAACATAAAGAGAAGA-ATATGTTTATGGTGCCTTATCCTAAAAGGAAT
1 AAGCATCAATATCATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATCAGAAAA-GAAT
*
2682178 AGG-GATTAGTATGAGTATTCATGTTTATCTTATTTTAAGAGACAAACTTTGATTCTATCAAAAA
64 -GGAGATTAGTATGAG-ATTCATGTTTGTCTTA-TTTAAGAGACAAACTTTGATTCTA-CAAAAA
* ** * **
2682242 CGGT-GGAAGGAAAAGTTTTTCTTGCGACCCTA
125 TGGTGGGAA-GAAAAGCCTTTCTTGCAAAAC-A
* ** * * * *
2682274 AAGCATCAATTTCATGTATCCTAAT--GAAGGGATTGTGTTTTGGCTTCAC-AATCTTGAAAAGA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TTATGG-TGC-CTAATC-AGAAAAGA
* * * * * * *
2682336 ACT-GAGA-GAGTTATGAGAATT-GTTTCTTATCTTATTTAAG-GTACGAACATTG-TTTTA-AA
62 A-TGGAGATTAG-TATGAG-ATTCATGT-TTGTCTTATTTAAGAG-ACAAACTTTGATTCTACAA
* ** * * * *
2682395 GGAAACTAG-GCAAAGAAAAG-ATTCCCATGCAAAAGAA
122 --AAA-TGGTGGGAAGAAAAGCCTT-TCTTGCAAAA-CA
* * * ** * ** * * *
2682432 AATCATCAATATAATTTATTATAATAAGGTGA-ATGTGTTTATAGTGCCTAATCACAAAATGAAT
1 AAGCATCAATATCATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATCAGAAAA-GAAT
* * * * * * * * *
2682496 GAAGATCATTACT-AGAATCCAGGTTTGACTCT-TTTGAG-GCACGAACTTAGACTT-TACAAAA
64 GGAGATTAGTA-TGAG-ATTCATGTTTGTCT-TATTTAAGAG-ACAAACTTTGA-TTCTAC-AAA
* * **
2682557 AATGGTAGGAA-AAAAGCCTTTCTTGTGAAATGA
123 AATGGTGGGAAGAAAAGCCTTTCTTG-CAAAACA
* * * * * **
2682590 AAGCATCAATATGATGTAAT-GTAAAGAGAAGGA-TATGCTTATGGTGCCTTGTCCTA-AAAAGA
1 AAGCATCAATATCATGT-ATCCTAATGAGAA-GACAATGTTTATGGTGCCTAAT-C-AGAAAAGA
* * *
2682652 ATGGGATTAATATGAGGGGATTAGTATGAGTACTCATGTTTATCTTATTTAAGAGACACACTTTG
62 AT--G--------GA---GATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTG
* *** ***
2682717 ATTCTATCAAAAAAGGT-GGAAGGAAAAATTTTTCTTGCGACCCCA
113 ATTCTA-CAAAAATGGTGGGAA-GAAAAGCCTTTCTTGC-AAAACA
* * ** * * * *
2682762 AAGCATCAGTTTCATGTATCCTAAT-A-AAGGGATTGTGTTTTGGCTTCAC-AATCTCGAAAAGA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TTATGG-TGC-CTAATC-AGAAAAGA
** * ** * * ** * * *
2682824 ATTAAGA-CAGTTACAAGAATCGAT-TCTTATCTTATTTAAG-GTACGGACATTG-TTTTAAAGG
62 ATGGAGATTAG-TATGAGATTC-ATGT-TTGTCTTATTTAAGAG-ACAAACTTTGATTCTACA--
** ** * * * *
2682885 AAAAT-AAGCAAAGAAAAG-ATTCACATGCAAAAGAA
121 AAAATGGTGGGAAGAAAAGCCTT-TCTTGCAAAA-CA
* * ** * * * *
2682920 AATCATCAATATCATTTATCCTAATGAGGTGA-ATGTGTTTATAGTGCTTAATCACAAAATGAAT
1 AAGCATCAATATCATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATCAGAAAA-GAAT
* * * * * * * *
2682984 GAAGATCATTACT-AGAATCATGGTTTGTCTCT-TTTGAG-GCACGAACTTAGACTT-TAGAAAA
64 GGAGATTAGTA-TGAGATTCAT-GTTTGTCT-TATTTAAGAG-ACAAACTTTGA-TTCTACAAAA
* ** * **
2683045 ATGGTAGGAA-AAGTGCCTTTCTTGTGAAATGA
124 ATGGTGGGAAGAAAAGCCTTTCTTG-CAAAACA
* * * * * * * *
2683077 AAGCATCAATATGATGTAACGTAAAAGAGAAGAAAATGTTTATGGTGCCTTATCCTGAAAAAAAA
1 AAGCATCAATATCATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAAT-CAG-AAAAGAA
* *
2683142 TAGG-GATTAGTATGAGTATTCATGTCTGTCTTAATTTAAGAGAGAAACTTTGATTCTATCAAAA
63 T-GGAGATTAGTATGAG-ATTCATGTTTGTCTT-ATTTAAGAGACAAACTTTGATTCTA-CAAAA
** ** * *
2683206 ATCAT-GGAAGGAAAAGTTTTTCTTACAACACCA
124 ATGGTGGGAA-GAAAAGCCTTTCTTGCAA-AACA
* ** * * * * *
2683239 AAGCATCAATTTCATGTAATCCTAAT-AG-AGGGAATGTGTTTTGGCT-CCGATTCTTGTAAAGA
1 AAGCATCAATATCATGT-ATCCTAATGAGAAGACAATGT-TTATGG-TGCCTAATC-AGAAAAGA
* * * *
2683301 ATGGAGATT-GT-TGCGAGAATCGATGTTTGTCTTATTTAAGGGATAAACTTTGATT-TAAAAGA
62 ATGGAGATTAGTAT--GAGATTC-ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCT-ACA-A
** ** * *
2683363 AAATAGG-GCAAAGAAAA-TATTTCCATGCAAAAGAA
122 AAAT-GGTGGGAAGAAAAGCCTTT-CTTGCAAAA-CA
* * * * * * * *
2683398 AATCATCAATATCATTTATGCTAATGAGGAGA-ATGTGTTTATAGTGCCTAATCATAAAATGAAA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATCAGAAAA-GAAT
** * * ** * * * * * * *
2683462 AAAGATCATTACAAGAATCCAAGTTTGTCTCATTTGAG-GCACGAACTTAGACTT-TACAAAATT
64 GGAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAG-ACAAACTTTGA-TTCTACAAAA-A
**
2683525 TGGTGGGAA-AAAAGCCTTTCTTGTGAAACGA
125 TGGTGGGAAGAAAAGCCTTTCTTGCAAAAC-A
* * * * * * * * * **
2683556 AAGCTTCAATATGATGTATTCTAAGGAGAAGACTATGTTTTTAGTGCCTTATCCTGAAAAGGCTA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-CAGAAAAGAAT-
* * * *
2683621 GG-GATTAGTATGAGAATTCACGTTTGTCTTATTTAACAAACAAACTTTGATTCTATCAAAAACG
64 GGAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA-CAAAAATG
* * ** ***
2683685 GT-AGAAGGAGAAGTTTTTCTTGCGACCCCA
127 GTGGGAA-GAAAAGCCTTTCTTGC-AAAACA
* * * * * * **
2683715 AAGCATTAATTTCATGTATCCTAATGA-AGGGC-ATGTGTT-TTG-GCTCTGATTCTCATAAAGA
1 AAGCATCAATATCATGTATCCTAATGAGAAGACAATGT-TTATGGTGC-CT-AATCAGA-AAAGA
* * * * ** *
2683776 ATGGAGATT-GTTATGAGAATCGATGCTTGTATTATTTAAGGGATGAACTTTGATT-TAAAGGAA
62 ATGGAGATTAG-TATGAGATTC-ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTACA--AA
** * * *
2683839 AATAGG-GCAAAGAAAAG-ATTTCCATGCAAAAGAA
123 AAT-GGTGGGAAGAAAAGCCTTT-CTTGCAAAA-CA
* * * * * *
2683873 AATCATCAATATCATTTATCCTAATGA-AGAGA-ATGTGTTTTTAGTGCCTAA-CGACAAAATGA
1 AAGCATCAATATCATGTATCCTAATGAGA-AGACA-ATGTTTATGGTGCCTAATC-AGAAAA-GA
* * * * * * * *
2683935 ATGAAGATCAATACT-AGAATCCATGTTTGTTTCTT-TTCAAG-CACGAACTTAGACTT-TACAA
62 ATGGAGATTAGTA-TGAG-ATTCATGTTTG--TCTTATTTAAGAGACAAACTTTGA-TTCTACAA
* * *
2683996 AGAATAGTGGGAA-AAACGCCTTTCTTGCAAAATGA
122 A-AATGGTGGGAAGAAAAGCCTTTCTTGCAAAA-CA
* * *
2684031 AAGCATCAATATGC-TGTTTCC-AATGAGAAGACAATGTTTGTGGTGCCTAATTCGGAAAAGAAT
1 AAGCATCAATAT-CATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAA-TCAGAAAAGAAT
* * *
2684094 GGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAAAAAACG
64 GGAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTA-CAAAAATG
** ** *
2684159 GT-GGAAGGAAAAGTTTTTCTTATG-ACCATA
127 GTGGGAA-GAAAAGCCTTTC-T-TGCAAAACA
* * * *
2684189 AACCATCAATTTCATGTATCCTAATGAAGGGAATGTATCCAACGAGAAGACAATGTTTGTGGAGC
1 AAGCATCAATATCATGTATCC---T-------A---AT-----GAGAAGACAATGTTTATGGTGC
* *
2684254 CTAATCCAGAAGAGAATGG-GATTAGTACGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTT
48 CTAAT-CAGAAAAGAATGGAGATTAGTATGAG-ATTCATGTTTGTCTTATTTAAGAGACAAACTT
** *
2684318 TGATTCTATCAAAAATGGT-GGAAGGAAAAGTTTTTCTTGCAACCACA
111 TGATTCTA-CAAAAATGGTGGGAA-GAAAAGCCTTTCTTGCAA-AACA
* * *
2684365 AAGCGTCAATTTCATGTATCCTAATGAAAAGA
1 AAGCATCAATATCATGTATCCTAATGAGAAGA
2684397 ATGTGTTTTG
Statistics
Matches: 5164, Mismatches: 1504, Indels: 1325
0.65 0.19 0.17
Matches are distributed among these distances:
147 7 0.00
148 40 0.01
149 36 0.01
150 8 0.00
151 8 0.00
152 4 0.00
153 1 0.00
154 9 0.00
155 99 0.02
156 171 0.03
157 741 0.14
158 2017 0.39
159 1390 0.27
160 281 0.05
161 59 0.01
162 34 0.01
163 5 0.00
166 1 0.00
168 1 0.00
169 2 0.00
170 12 0.00
171 50 0.01
172 45 0.01
173 2 0.00
174 2 0.00
175 2 0.00
176 101 0.02
177 36 0.01
ACGTcount: A:0.37, C:0.13, G:0.19, T:0.31
Consensus pattern (155 bp):
AAGCATCAATATCATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCAGAAAAGAATGG
AGATTAGTATGAGATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTACAAAAATGGTGG
GAAGAAAAGCCTTTCTTGCAAAACA
Found at i:2677694 original size:475 final size:472
Alignment explanation
Indices: 2676908--2684224 Score: 8478
Period size: 475 Copynumber: 15.4 Consensus size: 472
2676898 GTCTCATTTG
* * * * *
2676908 AAGCATCAATATGATGTATCCTAATGAGAAGACTATGTTTATGTTGCCTTATCTTGG-AAATAAT
1 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAAT-TCGGAAAAGAAT
* *
2676972 GGGGATTAGTATGAGTATTCATATTAGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACG
65 GGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACG
* * * * * *
2677037 ATGGAAGGAAAAGTTTTTCTTGCAACATCAAAGCATCAATGTCATATATCCTAAAGAAGGGAATG
130 GTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATG
* ** * *
2677102 TGTTTTGGCCTCACAATCTTGAAAAGAACT-GAGACAGTTACGTGAATCGATTCTTGTCTTATTT
195 TGTTTTGG-CTC-CAATCTCGAAAAGAA-TGGAGATTGTTACGAGAATCGATGCTTGTCTTATTT
* * * * *
2677166 AAGGTATGAACATTGTTTTAAAGGAAAATAGGCTAAGAAAATATTTCCATGCAAAAGAAACTCAT
257 AAGG-ATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCAT
* * *
2677231 CAATTTCATTTATCCTAATGA-GAGGAACGTGTTTATAGTGCCTAATCAAAAAATGAATGAAGAT
321 CAATATCATTTATCCTAATGAGGA-GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
*** * * *
2677295 CATTACTAGAATATGTGTTTGTCTTTTTTGAGGCACGAATTTAGACTTTACAAAAAATGGTGGGA
385 CATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGA
*
2677360 AAAAAGCCTTTCTTGCGAAA-CA
450 AAAAAGCCTTTCTTGCGAAATGA
*
2677382 ATAGCATCAATATGATGTAACCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAAT
1 A-AGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAAT
*
2677447 GGGGATTAGTATGAGCATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACG
65 GGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACG
* * * * *
2677512 ATGGAAGGAAAAGTTTTTCTTGCAACCCCAAAGCATCAATTTCATGTACCCCATAT-AAGGGAAT
130 GTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTA-ATGAAGGGAAT
* * * * * * *
2677576 TTCTTTTGGCTCCGATTCTCGTAAAGAATGGAGATTCTTACGAGAATCGATGCTTATTTTATTTA
194 GTGTTTTGGCTCC-AATCTCGAAAAGAATGGAGATTGTTACGAGAATCGATGCTTGTCTTATTTA
* *
2677641 AGAGATGAACTTTCATTTAAAGGAAAATAGGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCAT
258 AG-GATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATTTCCATGCAAAAGAAAATCAT
* **
2677706 CAATATCATTTATCCTCATGAGGAGAATGTGTTCGTAGTGCCTAATCACAAAATGAATGAAGATC
321 CAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
* **
2677771 ATTACTAGAATCTATGTTTGTCTCTTTTGAAGCACGAACTTAGAC--TACAAAAAAAAGTGGG-A
386 ATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAA
* *
2677833 AAAGGCCTTTCTTGCAAAATGA
451 AAAAGCCTTTCTTGCGAAATGA
* * * *
2677855 AAGCATCAATATGATGTATCCTTATGAGAAGACAATATTTATGGTGCCTAATCCGGAAAAGAATA
1 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAATG
* * *
2677920 GGGATTAGTATGAGTATCCATGTTTGTCTTATTTAAGAGATAAACTTTGATTCTATCAAAAATGG
66 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
* * * *
2677985 AGGAAGGAAAAGTTTTTCTTGTGACATCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGA
131 TGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGT
* * **
2678050 GTTTTGGCTTCACAATCTTGAAAAGAATTGAGACAGTTACGAGAATCGATGCTTGTCTTATTTAA
196 GTTTTGGC-TC-CAATCTCGAAAAGAATGGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAA
*
2678115 GGGATGAACTTTGATTTAAAGGAAAATATGGCAAAGAAAAGATTTCCATACAAAAGAAAATCATC
259 -GGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATC
* *
2678180 AATATCATTTATCCTACA-GAGGAAAATGTGTTTATAGTACCTAATCACAAAATGAATGAAGATC
322 AATATCATTTATCCTA-ATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
* * * *
2678244 ATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAGCTTAGACTATAAAAAAAATAGTGGGAA
386 ATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAA
2678309 AAAAGCCTTTCTTGCGAAATGA
451 AAAAGCCTTTCTTGCGAAATGA
* *
2678331 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATGCAGAAAAGAATG
1 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAATG
* * * * * ** **
2678396 GGGATTAGGATAAGTATTCATGTTTGT-TCTATTTAAGTGACAAACTTTGATCCCATGTAAAATA
66 GGGATTAGTATGAGTATTCATGTTTGTCT-TATTTAAGAGACAAACTTTGATTCTATCAAAAACG
* * * ** * * *
2678460 GTGGAAAGAAAAGCTTTTCTTGCAACACCAAAGCATCAATGGCATCTATCATAATG-AGGGAATA
130 GTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATG
* * * * * * *
2678524 TGTTTTGGCTTCCCAAGCAT-TAAAAAAATGTAGATTGTTACGAGAATCAATGCTTCTCATATTT
195 TGTTTTGGC-T-CCAATC-TCGAAAAGAATGGAGATTGTTACGAGAATCGATGCTTGTCTTA-TT
* *
2678588 TAGGGATGAACTTTGATTTTACAA--AAAATAGGGCATAGAAAAGATTTCCATGCAAAA-AAAAT
256 TAAGGATGAACTTTGA-TTTA-AAGGAAAATA-GGCAAAGAAAAGATTTCCATGCAAAAGAAAAT
* * * * *
2678650 CATTAATATCATTTATCCTAATGAGGTGAATGTGCTTATAGTGCCTAATCACAAAAGGAATGATG
318 CATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAG
* * * *
2678715 ATCACTGCTAGAATCCATGTTTGTCTCTTTTAAAGCAC-AGACATAGACTTTACAAAAAATGGTG
383 ATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGA-ACTTAGACTTTACAAAAAATGGTG
* *
2678779 GGAAAAAAGCCTTTCTTGCAAAACGA
447 GGAAAAAAGCCTTTCTTGCGAAATGA
* * *
2678805 AAGCATCAATATGATGTATCCTAATGAAAAGACAATGTTTACGGTGCCTAATTCGGAAAAGAGTG
1 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAATG
* *
2678870 GGGATTCGTATGGGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
66 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
* * * * * *
2678935 TGGAAGGAAAAGTTTTTCTTGGGACATCAAAGCATCAATGTCTTGTATCCTAATAAAGGGAATTT
131 TGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGT
* * * ** * *
2679000 GTTTTGGCTTCACAAGCTTGAAAAAAACT-GAGACAGTTACGAGAATTGATTCTTGTCTTATTTA
196 GTTTTGGC-TC-CAATCTCGAAAAGAA-TGGAGATTGTTACGAGAATCGATGCTTGTCTTATTTA
* *
2679064 AGGTATGAAC--AGCATTCTAAAGGAAAATAGGCAAAGAAAAGATTTCCATGGGAAAA-AAAATC
258 AGG-ATGAACTTTG-ATT-TAAAGGAAAATAGGCAAAGAAAAGATTTCCAT-GCAAAAGAAAATC
* * *
2679126 ATCAATATCATTTATCCTAATGAGGAGAATGCGTTTATAATGTCTAATCACAAAATGAATGAAGA
319 ATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
* *
2679191 TCATTACTATAATCCATGTTTGTCTCTTTTGAAGCGCGAACTTAGACTTTACAAAAAATGGTGGG
384 TCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGG
* *
2679256 AAAAAAGCGTTTCTTGCGAAACGA
449 AAAAAAGCCTTTCTTGCGAAATGA
* * * * * * * * * *
2679280 AAGCATCAATATGATGTATTCTAAAGAGAAGACTATGCTTATAGTGTCTTATCCTGAAATGAATG
1 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAATG
* * * *
2679345 GGGAGTAGTATGAGTATTCAGGTTTGTCTTATTGAAAAGACAAACTTTGATTCTATCAAAAACGG
66 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
* * * * *
2679410 TGGAAAGAAAAGTTTTTCTAGCGACATCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATTT
131 TGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGT
* * ** ** *
2679475 GTTATGGCT----T-T---ACAGAACT-GAGACAGTTACGAGAATTAATTCTTGTCTTATTTAAG
196 GTTTTGGCTCCAATCTCGAAAAGAA-TGGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAG
** * * * * * *
2679531 GTATGAAAATTGTTTTAAAGGAAAATAGGCAAAGAAGAGATTCCCAAGCAAAAGAAGATTATCAA
260 G-ATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
* * * * *
2679596 TATCATTTATCCTAATGCGGAGATTGTGTTTATAGTGCCTAATCACAAAATGAATAAATATTATT
324 TATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATT
* * * * ** * *
2679661 ACCAGAATCCAGGTTTGTCTCTTTTGAGGCATGAACTTAGACTTTGGAAAAATTGGTAGGAAAAA
389 ACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAAAAA
* *
2679726 TGCCTTTCTTGTGAAATGA
454 AGCCTTTCTTGCGAAATGA
* * * * ** **
2679745 AAGCATCAATATGATGTAACGTAAAGAGAAGA-ATATGTTTATGGTGCCTTACCCTAAAAAGAAT
1 AAGCATCAATATGATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATTCGGAAAAGAAT
* * * *
2679809 GGGGATTAGTTTGAGGATTCATGTTTATCTTATTTAAGAGACAAACGTTGATTCTATCAAAAACG
65 GGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACG
* *
2679874 GTGGAAGGAAAAGTTTTTCTTACGACCCCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATG
130 GTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATG
* * * * * ** *
2679939 TGTTTTGGATCTGATTCTCGTAAAGAATGAAGATTACTATGAGAATCGATGCTTGTCTTATTTAA
195 TGTTTTGGCTC-CAATCTCGAAAAGAATGGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAA
* *
2680004 GGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTT-CATGGAAAAGAAAATTATC
259 -GGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATC
* * *
2680068 AATATCATTTATCCTAATGAGTAGATTGTGTTTATTA-TGCCTAATCACAAAATGAATGAATATC
322 AATATCATTTATCCTAATGAGGAGAATGTGTTTA-TAGTGCCTAATCACAAAATGAATGAAGATC
* * * *
2680132 ATTACTAGAATCCATGTTTGTCTTTTTTGAAGCACGAACTTAAACTTTACAAAAATTGGTAGGAA
386 ATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAA
* * * **
2680197 AAAATCCTTCCTTGCAAAACAA
451 AAAAGCCTTTCTTGCGAAATGA
* * * * *
2680219 AAGCATCAATATGATGTGTCCTAAGGAGAAGACATTGTTTATGGTGCCTAATTCGGAAAAGATTC
1 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAATG
* * * * *
2680284 AGGAATAGTATGAGTATTCATGTTTGTCTTATTTTAGAAATAAACTTTGATTCTATCAAAAACAG
66 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAAC-G
* * * * *
2680349 G-GGAAAGAAAAGCTTTTCTTGCAACATCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
130 GTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATG
* ** * *
2680413 TGTTTTGGCTTCACAAT-TATGAAAAGAACT-GAGACAGTTACGAGAATCGATTCTTATCTTATT
195 TGTTTTGGC-TC-CAATCT-CGAAAAGAA-TGGAGATTGTTACGAGAATCGATGCTTGTCTTATT
* * * * *
2680476 TAAGGAACGAACATTGTTTTAAAGGAAAGTAGGCAAAGAAAAGATTTTCATGCAAAA-AAAATCA
256 TAAGG-ATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCA
* *
2680540 TCATTATCATTTATCCTAATGA-GATGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAGGA
320 TCAATATCATTTATCCTAATGAGGA-GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
* * * * * * * **
2680604 TCATTATTAGAATCCAGGTTTGTTTTTTTTTAGGCACGAACTTAGACTTTACAAAAAAAGAGTAA
384 TCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATG-GTGG
* *
2680669 GAAAAAAGCCTTTTTTGTGAAATGA
448 GAAAAAAGCCTTTCTTGCGAAATGA
* * * * * * * ** *
2680694 ATGCATCAATACGATGTATCGTAAAGAGAAGACTATGTTTATGGTGCCTTATCCTCAAAAGAATA
1 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAATG
* * *
2680759 GGGATTAGTATGAGTGTTCATGTTTATCTTATTTAAGAGACAAACTTTGATTCTATAAAAAACGG
66 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
* * * * *
2680824 CGTAAGGAAAAGTTTCTCTTGCAATC-CCAAAGCATCAATTTCATGTATCCTAATGAAAGGAATG
131 TGGAAGGAAAAGTTTTTCTTGCGA-CACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATG
*
2680888 TGTTTTGGCTCCAATTCTCGTAAAGAATGGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAA
195 TGTTTTGGCTCCAA-TCTCGAAAAGAATGGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAA
*
2680953 GGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATG-AAAAGAAATTCATC
259 -GGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATC
*
2681017 AATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGTCTAA-CAACAAAATGAATGAAGATC
322 AATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATC
* * *
2681081 ATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAATTGGTTGAAA
386 ATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAA
** *
2681146 AAAATTCTTTTTTGCGAAATGA
451 AAAAGCCTTTCTTGCGAAATGA
** * * *
2681168 AAGCATCAATATGATGCGTCCTAATGAGAAGATAGTGTTTATGGTGCCTAA-TCTGGAAAAGATT
1 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTC-GGAAAAGAAT
* * *
2681232 AGGGATT-CTATGAGTATTCATGTTTG-CTTTATTTAAGAGATAAACTTTGATTCTATCAAAAAC
65 GGGGATTAGTATGAGTATTCATGTTTGTC-TTATTTAAGAGACAAACTTTGATTCTATCAAAAAC
* * * *** * * **
2681295 GG-GAGAAAGAATAGCTTTTCTTGCGACTTTAAAGCATCAATGTAATACATCCTAATGAAGGGAA
129 GGTG-GAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAA
* * * * *
2681359 TGTGTTTAGACTTCATAGTC-CTGAAAAGAACT-AAGATTGTTAGGAGAATCGATGCTTGTCTTA
193 TGTGTTTTGGCTCCA-A-TCTC-GAAAAGAA-TGGAGATTGTTACGAGAATCGATGCTTGTCTTA
* *
2681422 TTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTTCGTGCAAAAGAAAA
254 TTTAA-GGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* *
2681487 TCATCAATATCATTTATCCTAATGTGGAGAATGTGTTTATAGTGCCTAATGACAAAATGAATGAA
317 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
* * * *
2681552 GATCATTACTAGAATCCATGTTTATCTCTTTTGAAGCTCGAACTTAGATTTTACAAAAATTGGAT
382 GATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGG-T
** * *
2681617 -GG-AAAAATTCTTTCTTGCGGAACGA
446 GGGAAAAAAGCCTTTCTTGCGAAATGA
* * * * * * * *
2681642 ACGCATCAATATGATGTGTCCTAATGAGAAGACAGTGCTTATGGTGGCTAATCCAGAAAAGACTG
1 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAATG
* * **
2681707 GGGATTAGTATGAGTATTCATGTTTGCCTTATTTAAGAGATAAACTTCAATTCTATCAAAAACAG
66 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAAC-G
* * * * * * * * *
2681772 G-GGAAAGAATAGCTTTTCCTACGACATCAACGCATCAA-TTAATGTATCTTAATGAAGGGAATG
130 GTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATG
** *
2681835 TGTTTTGGCTTCACAATCGT-GAAAAGAACT-GAGATTGTTACGAGAATCGATTTTTATCTTATT
195 TGTTTTGGC-TC-CAATC-TCGAAAAGAA-TGGAGATTGTTACGAGAATCGATGCTTGTCTTATT
** * * *
2681898 TAAGGTACAAACATTGTTTTAAAGGAAAATAGGCAAAGAAAAGATTCCCATGCAAAAGAAAATCA
256 TAAGG-ATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCA
* *
2681963 TCATTGTCATTTATCCTAATGA-GATGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
320 TCAATATCATTTATCCTAATGAGGA-GAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGA
* * ** *
2682027 TCATTACTAGAATCCAAG-TTGTCTCTTTTGAGGCAC-AGACTTAGACTTTACAAAATTTGGGGG
384 TCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGA-ACTTAGACTTTACAAAAAATGGTGG
**
2682090 GAAAAAA-CCTTTCTTATGAAATGA
448 GAAAAAAGCCTTTCTTGCGAAATGA
* * * * * * **
2682114 AAACGTCAATATGATGTAACATAAAGAGAAGA-ATATGTTTATGGTGCCTTA-TCCTAAAAGGAA
1 AAGCATCAATATGATGTATCCTAATGAGAAGACA-ATGTTTATGGTGCCTAATTCGGAAAA-GAA
* *
2682177 TAGGGATTAGTATGAGTATTCATGTTTATCTTATTTTAAGAGACAAACTTTGATTCTATCAAAAA
64 TGGGGATTAGTATGAGTATTCATGTTTGTCTTA-TTTAAGAGACAAACTTTGATTCTATCAAAAA
2682242 CGGTGGAAGGAAAAGTTTTTCTTGCGAC-CCTAAAGCATCAATTTCATGTATCCTAATGAAGGGA
128 CGGTGGAAGGAAAAGTTTTTCTTGCGACACC-AAAGCATCAATTTCATGTATCCTAATGAAGGGA
* * * * * * *
2682306 TTGTGTTTTGGCTTCACAATCTTGAAAAGAACTGAGAGA--GTTATGAGAATTGTTTCTTATCTT
192 ATGTGTTTTGGC-TC-CAATCTCGAAAAGAA-TG-GAGATTGTTACGAGAATCGATGCTTGTCTT
* * * * *
2682369 ATTTAAGGTACGAACATTGTTTTAAAGGAAACTAGGCAAAGAAAAGATTCCCATGCAAAAGAAAA
253 ATTTAAGG-ATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* ** * *
2682434 TCATCAATATAATTTATTATAATAAGGTGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
317 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
* * * *
2682499 GATCATTACTAGAATCCAGGTTTGACTCTTTTGAGGCACGAACTTAGACTTTACAAAAAATGGTA
382 GATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTG
*
2682564 GGAAAAAAGCCTTTCTTGTGAAATGA
447 GGAAAAAAGCCTTTCTTGCGAAATGA
* * * * ** ***
2682590 AAGCATCAATATGATGTAAT-GTAAAGAGAAGGA-TATGCTTATGGTGCCTTGTCCTAAAAAGAA
1 AAGCATCAATATGATGT-ATCCTAATGAGAA-GACAATGTTTATGGTGCCTAAT--TCGGAA-AA
* * *
2682653 TGGGATTAATATGAGGGGATTAGTATGAGTACTCATGTTTATCTTATTTAAGAGACACACTTTGA
61 ---G----A-AT--GGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGA
* * * *
2682718 TTCTATCAAAAAAGGTGGAAGGAAAAATTTTTCTTGCGACCCCAAAGCATCAGTTTCATGTATCC
116 TTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCC
* * ** ** *
2682783 TAATAAAGGGATTGTGTTTTGGCTTCACAATCTCGAAAAGAATTAAGACAGTTACAAGAATCGAT
181 TAATGAAGGGAATGTGTTTTGGC-TC-CAATCTCGAAAAGAATGGAGATTGTTACGAGAATCGAT
* * * * * * *
2682848 TCTTATCTTATTTAAGGTACGGACATTGTTTTAAAGGAAAATAAGCAAAGAAAAGA-TTCACATG
244 GCTTGTCTTATTTAAGG-ATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTC-CATG
* *
2682912 CAAAAGAAAATCATCAATATCATTTATCCTAATGAGGTGAATGTGTTTATAGTGCTTAATCACAA
307 CAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAA
*
2682977 AATGAATGAAGATCATTACTAGAAT-CATGGTTTGTCTCTTTTGAGGCACGAACTTAGACTTTA-
372 AATGAATGAAGATCATTACTAGAATCCAT-GTTTGTCTCTTTTGAAGCACGAACTTAGACTTTAC
* * ** *
2683040 GAAAAATGGTAGGAAAAGTGCCTTTCTTGTGAAATGA
436 AAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAATGA
* * * * * * * *
2683077 AAGCATCAATATGATGTAACGTAAAAGAGAAGAAAATGTTTATGGTGCCTTATCCTGAAAAAAAA
1 AAGCATCAATATGATGTATCCT-AATGAGAAGACAATGTTTATGGTGCCTAATTC-GGAAAAGAA
* * *
2683142 TAGGGATTAGTATGAGTATTCATGTCTGTCTTAATTTAAGAGAGAAACTTTGATTCTATCAAAAA
64 TGGGGATTAGTATGAGTATTCATGTTTGTCTT-ATTTAAGAGACAAACTTTGATTCTATCAAAAA
* * *
2683207 TC-ATGGAAGGAAAAGTTTTTCTTACAACACCAAAGCATCAATTTCATGTAATCCTAAT-AGAGG
128 -CGGTGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGT-ATCCTAATGA-AGG
* * * * *
2683270 GAATGTGTTTTGGCTCCGATTCTTGTAAAGAATGGAGATTGTTGCGAGAATCGATGTTTGTCTTA
190 GAATGTGTTTTGGCTCC-AATCTCGAAAAGAATGGAGATTGTTACGAGAATCGATGCTTGTCTTA
* * *
2683335 TTTAAGGGATAAACTTTGATTTAAAAGAAAATAGGGCAAAGAAAATATTTCCATGCAAAAGAAAA
254 TTTAA-GGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATTTCCATGCAAAAGAAAA
* * **
2683400 TCATCAATATCATTTATGCTAATGAGGAGAATGTGTTTATAGTGCCTAATCATAAAATGAAAAAA
317 TCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAA
* * * * **
2683465 GATCATTACAAGAATCCAAGTTTGTCTCATTTGAGGCACGAACTTAGACTTTACAAAATTTGGTG
382 GATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTG
* *
2683530 GGAAAAAAGCCTTTCTTGTGAAACGA
447 GGAAAAAAGCCTTTCTTGCGAAATGA
* * * * * * * * * ** *
2683556 AAGCTTCAATATGATGTATTCTAAGGAGAAGACTATGTTTTTAGTGCCTTATCCTGAAAAGGCTA
1 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAATG
* * * *
2683621 GGGATTAGTATGAGAATTCACGTTTGTCTTATTTAACAAACAAACTTTGATTCTATCAAAAACGG
66 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
* * * * *
2683686 TAGAAGGAGAAGTTTTTCTTGCGACCCCAAAGCATTAATTTCATGTATCCTAATGAAGGGCATGT
131 TGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGT
* * * *
2683751 GTTTTGGCTCTGATTCTC-ATAAAGAATGGAGATTGTTATGAGAATCGATGCTTGTATTATTTAA
196 GTTTTGGCTC-CAATCTCGA-AAAGAATGGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAA
2683815 GGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATC
259 -GGATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATC
* *
2683880 AATATCATTTATCCTAATGAAGAGAATGTGTTTTTAGTGCCTAA-CGACAAAATGAATGAAGATC
322 AATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC-ACAAAATGAATGAAGATC
* * * * *
2683944 AATACTAGAATCCATGTTTGTTTCTTTTCAAGCACGAACTTAGACTTTACAAAGAATAGTGGGAA
386 ATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAA
* *
2684009 AAACGCCTTTCTTGCAAAATGA
451 AAAAGCCTTTCTTGCGAAATGA
* * *
2684031 AAGCATCAATATGCTGTTTCC-AATGAGAAGACAATGTTTGTGGTGCCTAATTCGGAAAAGAATG
1 AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAATG
*
2684095 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAAAAAACGG
66 GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
** * *
2684160 TGGAAGGAAAAGTTTTTCTTATGAC-CATAAACCATCAATTTCATGTATCCTAATGAAGGGAATG
131 TGGAAGGAAAAGTTTTTCTTGCGACAC-CAAAGCATCAATTTCATGTATCCTAATGAAGGGAATG
2684224 T
195 T
2684225 ATCCAACGAG
Statistics
Matches: 5897, Mismatches: 796, Indels: 300
0.84 0.11 0.04
Matches are distributed among these distances:
464 5 0.00
465 390 0.07
466 2 0.00
467 1 0.00
468 1 0.00
470 1 0.00
471 10 0.00
472 324 0.05
473 518 0.09
474 1668 0.28
475 1765 0.30
476 363 0.06
477 171 0.03
478 186 0.03
479 57 0.01
480 2 0.00
482 2 0.00
486 7 0.00
487 65 0.01
488 327 0.06
489 32 0.01
ACGTcount: A:0.37, C:0.13, G:0.19, T:0.31
Consensus pattern (472 bp):
AAGCATCAATATGATGTATCCTAATGAGAAGACAATGTTTATGGTGCCTAATTCGGAAAAGAATG
GGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGG
TGGAAGGAAAAGTTTTTCTTGCGACACCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGT
GTTTTGGCTCCAATCTCGAAAAGAATGGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGG
ATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATA
TCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTAC
TAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAAAAAAG
CCTTTCTTGCGAAATGA
Found at i:2684350 original size:176 final size:177
Alignment explanation
Indices: 2684049--2684392 Score: 555
Period size: 176 Copynumber: 1.9 Consensus size: 177
2684039 ATATGCTGTT
* * * * *
2684049 TCCAATGAGAAGACAATGTTTGTGGTGCCTAATTCGGAAAAGAATGGGGATTAGTATGAGTATTC
1 TCCAACGAGAAGACAATGTTTGTGGAGCCTAATCCAGAAAAGAATGGGGATTAGTACGAGTATTC
2684114 ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAAAAAACGGTGGAAGGAAAAGTTTTTCT
66 ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAAAAAACGGTGGAAGGAAAAGTTTTTCT
** *
2684179 TATGACCATAAACCATCAATTTCATGTATCCTAATGAAGGGAATGTA
131 TACAACCACAAACCATCAATTTCATGTATCCTAATGAAGGGAATGTA
*
2684226 TCCAACGAGAAGACAATGTTTGTGGAGCCTAATCCAGAAGAGAAT-GGGATTAGTACGAGTATTC
1 TCCAACGAGAAGACAATGTTTGTGGAGCCTAATCCAGAAAAGAATGGGGATTAGTACGAGTATTC
* *
2684290 ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCT
66 ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAAAAAACGGTGGAAGGAAAAGTTTTTCT
* * *
2684355 TGCAACCACAAAGCGTCAATTTCATGTATCCTAATGAA
131 TACAACCACAAACCATCAATTTCATGTATCCTAATGAA
2684393 AAGAATGTGT
Statistics
Matches: 153, Mismatches: 14, Indels: 1
0.91 0.08 0.01
Matches are distributed among these distances:
176 113 0.74
177 40 0.26
ACGTcount: A:0.35, C:0.13, G:0.21, T:0.31
Consensus pattern (177 bp):
TCCAACGAGAAGACAATGTTTGTGGAGCCTAATCCAGAAAAGAATGGGGATTAGTACGAGTATTC
ATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAAAAAACGGTGGAAGGAAAAGTTTTTCT
TACAACCACAAACCATCAATTTCATGTATCCTAATGAAGGGAATGTA
Found at i:2684939 original size:18 final size:18
Alignment explanation
Indices: 2684897--2684940 Score: 54
Period size: 18 Copynumber: 2.4 Consensus size: 18
2684887 TCCATCTTCT
2684897 TCTCTCCTCCTCCTATCA
1 TCTCTCCTCCTCCTATCA
* *
2684915 TCCCTCCT-CTCTCTATTA
1 TCTCTCCTCCTC-CTATCA
2684933 TCTCTCCT
1 TCTCTCCT
2684941 ATCTTTCCTT
Statistics
Matches: 22, Mismatches: 3, Indels: 2
0.81 0.11 0.07
Matches are distributed among these distances:
17 3 0.14
18 19 0.86
ACGTcount: A:0.09, C:0.48, G:0.00, T:0.43
Consensus pattern (18 bp):
TCTCTCCTCCTCCTATCA
Found at i:2684943 original size:9 final size:9
Alignment explanation
Indices: 2684931--2684987 Score: 50
Period size: 9 Copynumber: 6.8 Consensus size: 9
2684921 CTCTCTCTAT
2684931 TATCTCTCC
1 TATCTCTCC
*
2684940 TATCTTTCC
1 TATCTCTCC
*
2684949 T-TCTAT-C
1 TATCTCTCC
* *
2684956 -ATCCCTTC
1 TATCTCTCC
2684964 TATCTCT-C
1 TATCTCTCC
2684972 TATCTCTCC
1 TATCTCTCC
2684981 TATCTCT
1 TATCTCT
2684988 TCTCATATTA
Statistics
Matches: 39, Mismatches: 5, Indels: 8
0.75 0.10 0.15
Matches are distributed among these distances:
7 4 0.10
8 13 0.33
9 22 0.56
ACGTcount: A:0.12, C:0.39, G:0.00, T:0.49
Consensus pattern (9 bp):
TATCTCTCC
Found at i:2685001 original size:41 final size:41
Alignment explanation
Indices: 2684904--2685011 Score: 130
Period size: 41 Copynumber: 2.6 Consensus size: 41
2684894 TCTTCTCTCC
* * * *
2684904 TCCTCCTATCATCCCTCCTCTCTCTATTATCTCTCCTATCTT
1 TCCTTCTATCATCCCTTCTATCTCT-CTATCTCTCCTATCTT
2684946 TCCTTCTATCATCCCTTCTATCTCTCTATCTCTCCTATCTCT
1 TCCTTCTATCATCCCTTCTATCTCTCTATCTCTCCTATCT-T
*
2684988 T-C-TCATATTATCCCTTCTATCTCT
1 TCCTTC-TATCATCCCTTCTATCTCT
2685012 ACTAGGAATT
Statistics
Matches: 59, Mismatches: 5, Indels: 5
0.86 0.07 0.07
Matches are distributed among these distances:
40 2 0.03
41 33 0.56
42 24 0.41
ACGTcount: A:0.13, C:0.40, G:0.00, T:0.47
Consensus pattern (41 bp):
TCCTTCTATCATCCCTTCTATCTCTCTATCTCTCCTATCTT
Found at i:2695141 original size:42 final size:42
Alignment explanation
Indices: 2695073--2695204 Score: 158
Period size: 42 Copynumber: 3.1 Consensus size: 42
2695063 TCATTCTTCC
* * * * *
2695073 ATCT-TCTTCTCTCCTCCTCCTGTCATCCCTCTTCTCTCTATT
1 ATCTCTCTTATCT-CTCCTCCTATCATCCCTCCTATCTCTACT
2695115 ATCTCTCTTATCTCTCCTCCTATCATCCCTCCTATCTCTACT
1 ATCTCTCTTATCTCTCCTCCTATCATCCCTCCTATCTCTACT
* * * *
2695157 ATCTCTCCTATCTCTCCTTCTATCATCCATCCTATCTCTTCT
1 ATCTCTCTTATCTCTCCTCCTATCATCCCTCCTATCTCTACT
*
2695199 TTCTCT
1 ATCTCT
2695205 TTGAGGGCTA
Statistics
Matches: 79, Mismatches: 10, Indels: 2
0.87 0.11 0.02
Matches are distributed among these distances:
42 72 0.91
43 7 0.09
ACGTcount: A:0.11, C:0.42, G:0.01, T:0.46
Consensus pattern (42 bp):
ATCTCTCTTATCTCTCCTCCTATCATCCCTCCTATCTCTACT
Found at i:2695150 original size:24 final size:24
Alignment explanation
Indices: 2695123--2695195 Score: 77
Period size: 21 Copynumber: 3.3 Consensus size: 24
2695113 TTATCTCTCT
*
2695123 TATCTCTCCTCCTATCATCCCTCC
1 TATCTCTCCTACTATCATCCCTCC
2695147 TA--TCT-CTACTATC-T--CTCC
1 TATCTCTCCTACTATCATCCCTCC
* *
2695165 TATCTCTCCTTCTATCATCCATCC
1 TATCTCTCCTACTATCATCCCTCC
2695189 TATCTCT
1 TATCTCT
2695196 TCTTTCTCTT
Statistics
Matches: 40, Mismatches: 3, Indels: 12
0.73 0.05 0.22
Matches are distributed among these distances:
18 6 0.15
20 4 0.10
21 14 0.35
22 4 0.10
24 12 0.30
ACGTcount: A:0.15, C:0.42, G:0.00, T:0.42
Consensus pattern (24 bp):
TATCTCTCCTACTATCATCCCTCC
Found at i:2695172 original size:9 final size:9
Alignment explanation
Indices: 2695114--2695174 Score: 56
Period size: 9 Copynumber: 7.1 Consensus size: 9
2695104 TTCTCTCTAT
*
2695114 TATCTCTCT
1 TATCTCTCC
2695123 TATCTCTCC
1 TATCTCTCC
* *
2695132 T-CCTAT-C
1 TATCTCTCC
*
2695139 -ATCCCTCC
1 TATCTCTCC
*
2695147 TATCTCTAC
1 TATCTCTCC
2695156 TATCTCTCC
1 TATCTCTCC
2695165 TATCTCTCC
1 TATCTCTCC
2695174 T
1 T
2695175 TCTATCATCC
Statistics
Matches: 40, Mismatches: 9, Indels: 6
0.73 0.16 0.11
Matches are distributed among these distances:
7 3 0.08
8 4 0.10
9 33 0.82
ACGTcount: A:0.13, C:0.43, G:0.00, T:0.44
Consensus pattern (9 bp):
TATCTCTCC
Found at i:2697058 original size:33 final size:32
Alignment explanation
Indices: 2697012--2697106 Score: 136
Period size: 33 Copynumber: 2.9 Consensus size: 32
2697002 TCCATCTTCT
* *
2697012 TCTCTCCTCCTATCATCCCTCCTCTCTCTATTA
1 TCTCTCCT-CTATCATCCCTTCTATCTCTATTA
*
2697045 TCTCTCCTACTATCATCCCTTCTATCTCTCTTA
1 TCTCTCCT-CTATCATCCCTTCTATCTCTATTA
2697078 TCTCTCCTCATATCATCCCTTCTATCTCT
1 TCTCTCCTC-TATCATCCCTTCTATCTCT
2697107 TCTTTCTCTT
Statistics
Matches: 57, Mismatches: 4, Indels: 2
0.90 0.06 0.03
Matches are distributed among these distances:
32 1 0.02
33 56 0.98
ACGTcount: A:0.14, C:0.42, G:0.00, T:0.44
Consensus pattern (32 bp):
TCTCTCCTCTATCATCCCTTCTATCTCTATTA
Found at i:2697115 original size:33 final size:33
Alignment explanation
Indices: 2697006--2697115 Score: 129
Period size: 33 Copynumber: 3.4 Consensus size: 33
2696996 CACTCTTCCA
* * *
2697006 TCTTC-TTCTCTCCTCCTATCATCCCTCCTCTC
1 TCTTCTTTCTCTCCTCATATCATCCCTTCTATC
*
2697038 TCTAT-TATCTCTCCT-ACTATCATCCCTTCTATC
1 TCT-TCTTTCTCTCCTCA-TATCATCCCTTCTATC
2697071 TC-TCTTATCTCTCCTCATATCATCCCTTCTATC
1 TCTTCTT-TCTCTCCTCATATCATCCCTTCTATC
2697104 TCTTCTTTCTCT
1 TCTTCTTTCTCT
2697116 TTGAGGGCTA
Statistics
Matches: 66, Mismatches: 5, Indels: 13
0.79 0.06 0.15
Matches are distributed among these distances:
31 1 0.02
32 4 0.06
33 56 0.85
34 5 0.08
ACGTcount: A:0.12, C:0.41, G:0.00, T:0.47
Consensus pattern (33 bp):
TCTTCTTTCTCTCCTCATATCATCCCTTCTATC
Found at i:2700564 original size:158 final size:155
Alignment explanation
Indices: 2699860--2700578 Score: 380
Period size: 158 Copynumber: 4.5 Consensus size: 155
2699850 GCCTTATCCT
* * * *
2699860 GAAAAGAATGGGGATTAG-TATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCT
1 GAAAAGAATGGAGATT-GTTATGAG-AATCATGTTTGTCTTATTTAAGGGATAAACTTTGATT-T
* * * *
2699924 ATAAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACACTAAAGCATCAATTTCTTGTATCCTAAT
63 ATAAAAAATGG-GGAAAGAAAAGTTTTTCTT-TGACACTAAAGCATCAATATCATGTATCCTAAT
* *
2699989 GAAAGG--AATGTGTTTGGGC-TCTGATTCTT
126 G-AAGGACAATGTGTTTTGGCTTC-GATTCTC
* * * * *
2700018 GTAAAGAATAGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTT-T
1 GAAAAGAATGGAGATTGTTATGAGAATC-ATGTTTGTCTTATTTAAGGGATAAACTTTGATTTAT
* * * * * ** * * * *
2700082 AAGGAAAATAGGGCAAAGAAAA-TATTTCCATGTAAAAGAAAATCAACAATATCGTTTATCCTAA
65 AA--AAAAT-GGGGAAAGAAAAGT-TTTTC-TTTGACACTAAAGCATCAATATCATGTATCCTAA
* * ** * * *
2700146 TG-AGGAGAATGTGTTTATAGCACCTAATCAC
125 TGAAGGACAATGTGTTT-TGGCTTCGATTCTC
* * * * * * *** *
2700177 -AAAATGAAAGAAGATTGTTACTG-GAATCCAAGTTTGTCTCATTTGAGGCACGGACTTAGACTT
1 GAAAA-GAATGGAGATTGTTA-TGAGAAT-CATGTTTGTCTTATTTAAGGGATAAACTTTGA-TT
* ** * * ** * * * *
2700240 TACAAAATTTGAGGGGAA-AAAAGCCTTTT-TACGA-AATGAAAGCTTCAATATGATGTATTCTA
62 TATAAAAAATG-GGGAAAGAAAAG-TTTTTCTTTGACACT-AAAGCATCAATATCATGTATCCT-
* *
2700302 AATAGAA-GACTATGT-TTTTAGTGCCTT--ATCCT-
123 AAT-GAAGGACAATGTGTTTT-G-G-CTTCGATTCTC
* * ** *
2700334 GAAAAGAATGGGGATTAG-TATGAGAATTCACGTTTGTCTTATTTAATAGATAACCTTTGATTCT
1 GAAAAGAATGGAGATT-GTTATGAGAA-TCATGTTTGTCTTATTTAAGGGATAAACTTTGATT-T
* *
2700398 ATCAAAAATGGTGGAAAGAAAAGTTTTTCTTTCGACACTAAAGCATCAATTTCATGTATCCTAAT
63 ATAAAAAATGG-GGAAAGAAAAGTTTTTCTTT-GACACTAAAGCATCAATATCATGTATCCTAAT
2700463 GAAGGA-AATGTGTTTTGGCTTCGATTCTC
126 GAAGGACAATGTGTTTTGGCTTCGATTCTC
* * *
2700492 GTAAAGAATGGAGATTGTTATGAGAATCGATGCTTGTCTTATTTAGGGGATAAACTTTGATTTA-
1 GAAAAGAATGGAGATTGTTATGAGAATC-ATGTTTGTCTTATTTAAGGGATAAACTTTGATTTAT
*
2700556 AAGGAAAATAGGGCAAAGAAAAG
65 AA--AAAAT-GGGGAAAGAAAAG
2700579 ATTTCCATGC
Statistics
Matches: 406, Mismatches: 109, Indels: 92
0.67 0.18 0.15
Matches are distributed among these distances:
155 3 0.01
156 14 0.03
157 91 0.22
158 198 0.49
159 88 0.22
160 10 0.02
161 2 0.00
ACGTcount: A:0.35, C:0.11, G:0.21, T:0.33
Consensus pattern (155 bp):
GAAAAGAATGGAGATTGTTATGAGAATCATGTTTGTCTTATTTAAGGGATAAACTTTGATTTATA
AAAAATGGGGAAAGAAAAGTTTTTCTTTGACACTAAAGCATCAATATCATGTATCCTAATGAAGG
ACAATGTGTTTTGGCTTCGATTCTC
Found at i:2700966 original size:475 final size:473
Alignment explanation
Indices: 2698727--2702438 Score: 4118
Period size: 474 Copynumber: 7.8 Consensus size: 473
2698717 GGTTTTCATC
* * *
2698727 AATGTGTTTATTGTGCCTAATCACAAAATGAATGAATATCATTACTAGAATCCATGTTTGCCTCT
1 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCT
* * * * * * * *
2698792 TTTGAAACTCAAACTTAAACTTTAGAAAAATTGGTGGGAAAAAATCCTTTCTTGCGAAACAAAAG
66 TTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAG
* * * * * * *
2698857 CATCAATATCATGTGTCTTAATGAGAAG-CAAATGTTTATGGTGCCTAATCTAGAAAAGAGTGGG
131 CATCAATATGATGTATCCTAAAGAGAAGAC-AATGTTTATGGTGCCTTATCCAGAAAAGAATGGG
* * * *
2698921 GATTAGTATAAGTATTCATGTTTGCCTTATTTAAGAGATAAACTTTGATTCTATCAAAAATAGG-
195 GATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAA-CGGT
** * * * *
2698985 GGAAATAATAGCTTTTCTTGCAACATCAAAGCATCAATGTCAAGTATCCTAATGAAGGGAATGTG
259 GGAAGGAAAAGTTTTTCTTGCAACCTCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
** * * *
2699050 TTTTGGCTTCACAATCAT-GAAAAGAACTGAGACAGTTACGAGAATCGATTCTTATCTTATTTAA
324 TTTTGGCTT-TGATTC-TCGTAAAGAA-TGAGATAGTTACGAGAATCGATTCTTATCTTATTTAA
* * * *
2699114 GGTACGAACATTGTTTTAAAGGAAAATAGGCAAAAAAAAAAAGA-TTCCTATGCAAAA-AAAATC
386 GGTATGAACTTTGATTTAAAGGAAAATAGGC---AAAGAAAAGATTTCC-ATGCAAAAGAAAATC
*
2699177 ATCATTATCATTTATCCTAATGA-GATG
447 ATCAATATCATTTATCCTAATGAGGA-G
* * * * *
2699204 AATGTGTTTATAATGCCTAATCATAAAATGAATAAAGATCATTACTAGAAACCAGGTTTGTCTCT
1 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCT
** * * * * * *
2699269 TTTGGGGCACGAACTAAGACTTTCCAAAAAATGATAGGAAAAAAGCCTTTCTTGTGAAATGAAAG
66 TTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAG
* * *
2699334 CATCAATATGATGTATCGTAAAGAGAAGACTATGTTTTATGGTGCTTTATCCTA-AAAA-AATGG
131 CATCAATATGATGTATCCTAAAGAGAAGACAATG-TTTATGGTGCCTTATCC-AGAAAAGAATGG
* * *
2699397 GGATTGGTATGAGTATTCATGTTTGCCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGA
194 GGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGT
* * *
2699462 GGAAGGAAAAGTTTTTCTTGCGACATCAAAGCATCAATGTCATGTATCCTAACGAAGGGAATGTG
259 GGAAGGAAAAGTTTTTCTTGCAACCTCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
* * * *
2699527 TTTTGGCTTTCGA-TCTTGAAAAGAACTAAGATAGTTATGAGAATCGATTCTTATCTTATTTAAG
324 TTTTGGCTTT-GATTCTCGTAAAGAA-TGAGATAGTTACGAGAATCGATTCTTATCTTATTTAAG
* * * * *
2699591 GTACGAACATT-ATTTTAAGAGAGAATAGGCAAAGAAAAGATTTTCATGCAAAAGAAAATCATCA
387 GTATGAACTTTGATTTAAAG-GAAAATAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCA
* * * * *
2699655 AAAACATTTATTCTAATAAAGAG
451 ATATCATTTATCCTAATGAGGAG
* * * *
2699678 AATGTGCTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATGCAAGTTTGTCTCA
1 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCT
* ** * * *
2699743 TTTGAGGCACGAACTTAGACTTTACAAAATTTGGTGGGAAAAAAGCCTTTTTTGCAAAATGAAAG
66 TTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAG
* * * *
2699808 C-TGCAATATGATGTATCATAAAGAGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGG
131 CAT-CAATATGATGTATCCTAAAGAGAAGACAATGTTTATGGTGCCTTATCCAGAAAAGAATGGG
*
2699872 GATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATAAAAAACGGTG
195 GATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTG
** * * *
2699937 GAAGGAAAAGTTTTTCTTGTGACACT-AAAGCATCAATTTCTTGTATCCTAATGAAAGGAATGTG
260 GAAGGAAAAGTTTTTCTTGCAAC-CTCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
* * * * * *
2700001 TTTGGGCTCTGATTCTTGTAAAGAATAGAGATTGTTACGAGAATCGATGCTTGTCTTATTTAAGG
324 TTTTGGCTTTGATTCTCGTAAAGAAT-GAGATAGTTACGAGAATCGATTCTTATCTTATTTAAGG
* * * * *
2700066 GATGAACTTTGATTTTAAGGAAAATAGGGCAAAGAAAATATTTCCATGTAAAAGAAAATCAACAA
388 TATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
*
2700131 TATCGTTTATCCTAATGAGGAG
452 TATCATTTATCCTAATGAGGAG
** * ** * * *
2700153 AATGTGTTTATAGCACCTAATCACAAAATGAAAGAAGATTGTTACTGGAATCCAAGTTTGTCTCA
1 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCT
* * ** * *
2700218 TTTGAGGCACGGACTTAGACTTTACAAAATTTGAG-GGGAAAAAAGCCTTT-TTACGAAATGAAA
66 TTTGAAGCACGAACTTAGACTTTACAAAAAATG-GTGGGAAAAAAGCCTTTCTTGCGAAACGAAA
* * * * * * *
2700281 GCTTCAATATGATGTATTCTAAATAGAAGACTATGTTTTTAGTGCCTTATCCTGAAAAGAATGGG
130 GCATCAATATGATGTATCCTAAAGAGAAGACAATGTTTATGGTGCCTTATCCAGAAAAGAATGGG
* * * * * *
2700346 GATTAGTATGAGAATTCACGTTTGTCTTATTTAATAGATAACCTTTGATTCTATCAAAAATGGTG
195 GATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTG
* * * * *
2700411 GAAAGAAAAGTTTTTCTTTCGACACT-AAAGCATCAATTTCATGTATCCTAATGAAGGAAATGTG
260 GAAGGAAAAGTTTTTCTTGCAAC-CTCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
* * * * * *
2700475 TTTTGGCTTCGATTCTCGTAAAGAATGGAGATTGTTATGAGAATCGATGCTTGTCTTATTTAGGG
324 TTTTGGCTTTGATTCTCGTAAAGAAT-GAGATAGTTACGAGAATCGATTCTTATCTTATTTAAGG
* *
2700540 GATAAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
388 TATGAACTTTGATTTAAAGGAAAATA-GGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAA
* *
2700605 TATTATTTATCCTATTGAGGAG
452 TATCATTTATCCTAATGAGGAG
*
2700627 AATGTGTTTATAGTGCCTTAA-CAACAAAATGAATGAAGATCATTACTAGAATCCATCTTTGTCT
1 AATGTGTTTATAGTGCC-TAATC-ACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCT
** * * *
2700691 CTTTTGAAGCACGAACTTAGACTTTACAAAAAATCATGGAAAAAAAGCCTTTCTCGCAAAACGAA
64 CTTTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAA
* * * * * *
2700756 AGCGTTAATATGATGCATCCTAATGAGAAGACAATGTTTATGGTGCCTAATCCAGAAAAGAATAG
129 AGCATCAATATGATGTATCCTAAAGAGAAGACAATGTTTATGGTGCCTTATCCAGAAAAGAATGG
* *
2700821 GGATTAGTATGAGTATTCATGTTTGTGTTGTTTAAGAGA-AAACTTTGATTCTATCAAAAACGGT
194 GGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGT
* * * * *
2700885 GGAAGGAAAAGTTTTTTTTGCAACCTCGAAGCATCAATTTCATGTATCCTATTGAAGAGAATGTG
259 GGAAGGAAAAGTTTTTCTTGCAACCTCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTG
* * * * * *
2700950 TTTTGGCTTTGATTCTCGTAAAGAATGGAGATTGTTGCAAGAATCGATGCTTGT-TAGATTTAA-
324 TTTTGGCTTTGATTCTCGTAAAGAAT-GAGATAGTTACGAGAATCGATTCTTATCT-TATTTAAG
* * *
2701013 GTGATGAACTTTGATTTAAAGGAAAACAAGGCAAAGAAATGATTTCCATGCAAACGAAAATCATC
387 GT-ATGAACTTTGATTTAAAGGAAAA-TAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATC
* *
2701078 AATATCATTTATCCTGATTAGGAG
450 AATATCATTTATCCTAATGAGGAG
* * *
2701102 AATGTGTTTATAGTGCCTAACCACAAAATGAATGAAGATCATTACTGGAATCCATGTTTGTCTTT
1 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCT
* * * * * * *
2701167 TTTGTAGTACAAACTTAGACTTTACCAAAATTGGTGGGAAAAAATCCTTTCTTGCAAAACGAAAG
66 TTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAG
* * * * * * ** ** *
2701232 CATCAATATGAAGAACCCTAATGAGAAGAAAATGTTTATGGTGCCTAATCTGGTGAAGATTGGGG
131 CATCAATATGATGTATCCTAAAGAGAAGACAATGTTTATGGTGCCTTATCCAGAAAAGAATGGGG
* * * * *
2701297 ATTAGTATGAGTATTCATGTTTATCTTATTTAAGAGACAAACTTTGAATCAACCAAAAATGGTGG
196 ATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGG
* * *
2701362 AAGGAAAACTTTTTCTTGCAACATCAAAGCATCAATGTCATGTATCCAAATGAAGGGAATGTGTT
261 AAGGAAAAGTTTTTCTTGCAACCTCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTT
** * * * * * * *
2701427 TTGGCTTCACAATCTGGAAAAGAAACGAGACAGTTACAAGAATCAATTCTTATCTTATTTAAGGT
326 TTGGCTT-TGATTCTCGTAAAG-AATGAGATAGTTACGAGAATCGATTCTTATCTTATTTAAGGT
* * *
2701492 ATGAACATTGTTTTAAAGGAAAATAGGCAAAGAAAATA-TTCACATGCAAAAGAAAATCATCAAT
389 ATGAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTC-CATGCAAAAGAAAATCATCAAT
*
2701556 ATCATTTATCCTAATGAGGTG
453 ATCATTTATCCTAATGAGGAG
* * * *
2701577 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAATATCATTACTAAAATCCAAGTTTGTCTCA
1 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCT
* * * * *
2701642 TTTGAGGCATGAACTTAGACTTTACAAAAAATGGTGCGAAAAAAACCTTTCTTGCGAAATGAAAG
66 TTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAG
* * * ** * *
2701707 CATCAATATAATGTATCCTAAAGAGAAGTCTATAAGCATAT--TGCATTATCCTGAAAAGAATGG
131 CATCAATATGATGTATCCTAAAGAGAAGAC-A-ATGTTTATGGTGCCTTATCCAGAAAAGAATGG
* * * * **
2701770 GAATGAGTATGAGTATTCATGTTTGTCTTATTTAAGCGACAAACTTTGATTCAATCAAAAACAAT
194 GGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGT
* * * *
2701835 GGAAACG-AATGCTTTTCTTGCAACAC-CAAAGCATCAGTGTCATGTATCCTAAT-AAGGGAATG
259 GG-AAGGAAAAGTTTTTCTTGCAAC-CTCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATG
** * * * * * *
2701897 TGTTTTGGCTTCACAATCTTGTAAAGAACTAAGATAGTTATGAGAATTGATTATTATCTTATTTA
322 TGTTTTGGCTT-TGATTCTCGTAAAGAA-TGAGATAGTTACGAGAATCGATTCTTATCTTATTTA
* * * * *
2701962 TGGTATGAA-TGATGTTTTAAAGGAAAATAGGCAAATAAAAGATTTCCATGCAAAAGAAAATTAT
385 AGGTATGAACT-TTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCAT
*
2702026 CAATATCATTTATCCTAATTAGGAG
449 CAATATCATTTATCCTAATGAGGAG
* * * *
2702051 AATATGTTTATAGTGCCTAATCACAACATGAATGAAGACCATTACTAGAATCCATGTTTCTCTCT
1 AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCT
* * ** * *
2702116 TTTGGAGCACGAA-TGTAGTA-TTTACAAAAAATGGGGGGGGGGGAAAAGACTTTCTTGTGAAAC
66 TTTGAAGCACGAACT-TAG-ACTTTACAAAAAAT---GGTGGGAAAAAAGCCTTTCTTGCGAAAC
* * * * * *
2702179 GAAAGCATCAATATGGTGTATTCTAAAAAGAAGACCATGTTTAAGTTGCCTTATCCTA-AAAAGA
126 GAAAGCATCAATATGATGTATCCTAAAGAGAAGACAATGTTTATGGTGCCTTATCC-AGAAAAGA
* * * ** * * * *
2702243 ATGGGGAATAGCATGAGAATTTGTGTTTCTCTTATTTTAGAGACAAACTTTGATTTTATAAAAAA
190 ATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAA
* * * * * * *
2702308 CGGCGGAAGGAAAAGCTTTACTTGCGACCCCAAAGCATCAATTTCATGTATCCTAATGAAAGGAA
255 CGGTGGAAGGAAAAGTTTTTCTTGCAACCTCAAAGCATCAATGTCATGTATCCTAATGAAGGGAA
* * * * *
2702373 TGTGTTTTGGCTCTGATTCTCGTAAAG-ATCGGAGATTGTTATGAGAATCGATACTTGTCTTATT
320 TGTGTTTTGGCTTTGATTCTCGTAAAGAAT--GAGATAGTTACGAGAATCGATTCTTATCTTATT
2702437 TA
383 TA
2702439 TGGTGCCTAA
Statistics
Matches: 2766, Mismatches: 414, Indels: 110
0.84 0.13 0.03
Matches are distributed among these distances:
473 43 0.02
474 1109 0.40
475 874 0.32
476 231 0.08
477 471 0.17
478 37 0.01
479 1 0.00
ACGTcount: A:0.37, C:0.13, G:0.19, T:0.32
Consensus pattern (473 bp):
AATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCT
TTTGAAGCACGAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAG
CATCAATATGATGTATCCTAAAGAGAAGACAATGTTTATGGTGCCTTATCCAGAAAAGAATGGGG
ATTAGTATGAGTATTCATGTTTGTCTTATTTAAGAGACAAACTTTGATTCTATCAAAAACGGTGG
AAGGAAAAGTTTTTCTTGCAACCTCAAAGCATCAATGTCATGTATCCTAATGAAGGGAATGTGTT
TTGGCTTTGATTCTCGTAAAGAATGAGATAGTTACGAGAATCGATTCTTATCTTATTTAAGGTAT
GAACTTTGATTTAAAGGAAAATAGGCAAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATC
ATTTATCCTAATGAGGAG
Found at i:2702615 original size:217 final size:216
Alignment explanation
Indices: 2702237--2702654 Score: 604
Period size: 217 Copynumber: 1.9 Consensus size: 216
2702227 CCTTATCCTA
** * * *
2702237 AAAAGAATGGGGAATAGCATGAGAATTTGTGTTTCTCTTATTTTAGAGACAAACTTTGATTTTAT
1 AAAAGAATGGGGAATAGCATGAGAATTCATCTTTCTCTTATTTAAGAGACAAACTTTGATTCTAT
* *
2702302 AAAAAACGGCGGAAGGAAAAGCTTTACTTGCGACCCCAAAGCATCAATTTCATGTATCCTAATGA
66 AAAAAACGGCGGAAGGAAAAGCTTTACTTGCAACCCCAAAGCATCAATTTCATGTATCCCAATGA
* * *
2702367 AAGGAATGTGTTTTGGCTCTGATTCTCGTAAAG-ATCGGAGATTGTTATGAGAATCGATACTTGT
131 AAGGAATGTGTTTTGGCTCAGATTCTCGTAAAGAAT-AGAGATTGTTACGAGAATCGAT-CTTGT
2702431 CTTATTTATGGTGCCTAATCCGG
194 CTTATTTATGGTGCCTAATCCGG
* * * *
2702454 AAAAGAATGGGGATTAGTATGAGTATTCATCTTTGTCTTATTTAAGAGACAAACTTTGATTCTAT
1 AAAAGAATGGGGAATAGCATGAGAATTCATCTTTCTCTTATTTAAGAGACAAACTTTGATTCTAT
* * * * * *
2702519 CAAAAATGGTGGAAGGAAAAGTTTTTCTTGCAACCCTAAAGCATCAATTTCATGTATCCCAATGA
66 AAAAAACGGCGGAAGGAAAAGCTTTACTTGCAACCCCAAAGCATCAATTTCATGTATCCCAATGA
* * *
2702584 AGGGAATGTGTTTTGGCTCAGATTTTCGTAAAGAATAGAGATTGTTACGAGAATTGATCTTGTCT
131 AAGGAATGTGTTTTGGCTCAGATTCTCGTAAAGAATAGAGATTGTTACGAGAATCGATCTTGTCT
2702649 TATTTA
196 TATTTA
2702655 AGGGATGAAC
Statistics
Matches: 177, Mismatches: 23, Indels: 3
0.87 0.11 0.01
Matches are distributed among these distances:
216 13 0.07
217 162 0.92
218 2 0.01
ACGTcount: A:0.32, C:0.13, G:0.21, T:0.34
Consensus pattern (216 bp):
AAAAGAATGGGGAATAGCATGAGAATTCATCTTTCTCTTATTTAAGAGACAAACTTTGATTCTAT
AAAAAACGGCGGAAGGAAAAGCTTTACTTGCAACCCCAAAGCATCAATTTCATGTATCCCAATGA
AAGGAATGTGTTTTGGCTCAGATTCTCGTAAAGAATAGAGATTGTTACGAGAATCGATCTTGTCT
TATTTATGGTGCCTAATCCGG
Found at i:2703630 original size:474 final size:472
Alignment explanation
Indices: 2702435--2714891 Score: 15261
Period size: 474 Copynumber: 26.4 Consensus size: 472
2702425 ACTTGTCTTA
* *
2702435 TTTATGGTGCCTAATCCGGAAAAGAATGGGGATTAGTATGAGTATTCATCTTTGTCTTATTTAAG
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
*
2702500 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCAACCCTAAAGCATCA
66 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACCC-AAAGCATCA
* * *
2702565 ATTTCATGTATCCCAATGAAGGGAATGTGTTTTGGC-TCAGATTTTCGTAAAGAATAGAGATTGT
130 ATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTC--ATTCTCATAAAGAAT-GAGATTGT
* * * *
2702629 TACGAGAATTGAT-CTTGTCTTATTTAAGGGATGAACTTTGAATTAAAGGAACATATGGCAAAGA
192 TACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGA
* * *
2702693 AAAGGTTTCCATGCTAAAA-AAAATCATCAATATCATTTATCCTAATGAGCAAAATGTGTTTATA
257 AAAGATTTCCATGC-AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATA
** * * *
2702757 GTGCCTAAAGACAAAATGAATGAAGATCAGTACTAGAATCCATGTCTATCTCTTTTGAAGCACGA
321 GTGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGA
* *
2702822 ACTTAGACTTTACAAAAAATGGTGGGAAAAATGCCTTTCTTGCGAAACGAAAGCATCAATATGTT
386 ACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGAT
2702887 GTATCC-AATGAGAAGACAATG
451 GTATCCTAATGAGAAGACAATG
* * * * *
2702908 TTTGTGGTGCCTAATTCGGAAAAGAAT-GGGATTAGTAGGAGTATTCATGTTTGTCTAATTTAAG
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
* * *
2702972 AGACAAACTTTGATTCTATCAAAAACGGTGAAAGGAAAAGTTTTTCTTGTGACCCCAAAGCATCA
66 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGA-CCCAAAGCATCA
* * * * * *
2703037 ATTTCAAGTATCCTAATGAAGGAAATGTGTTTTGGCTTTGATTTTCGTAAAGAATGGAGATTATT
130 ATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGC-TTCATTCTCATAAAGAAT-GAGATTGTT
* *
2703102 ACAAGAATCGATGCTTGTCTTATTTACGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAA
193 ACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAA
*
2703167 AAGATTTCCATGCAAAAGAAAATCATCAATATCATTTGTCCTAATGAGGAGAATGTGTTTATAGT
258 AAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
* * *
2703232 GCCTAATCAC-AATTGAATGAAGACCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAAC
323 GCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAAC
* * * * * *
2703296 TTAGACTTTGCAAAAAGTGGTGAGAAAAAAGACTTTCTTGCGAAACGAAAGCAACAATACGATGT
388 TTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGT
* *
2703361 ATCTTAATGAGAAGACTATG
453 ATCCTAATGAGAAGACAATG
* * * *
2703381 TTTATGTTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGTTTTTATGTTTGTCTTATTTAAG
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
* * *
2703446 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCCTGCAACACCAAAGCATTA
66 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGAC-CCAAAGCATCA
* * * ** * *
2703511 ATTTCATGTATCTTAATGAAAGGAACGTGTTTTGGCTTCATAATCATGAAAGGAACTAAGACAT-
130 ATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCATTCTCAT-AAA-GAA-TGAGA-TTG
* * * * * * * * *
2703575 TTGCGGGAATCGATTCTTATCTTATTTAAGGTACGAACATTGTTTTAAA-GAAAATA-GGCAAAT
191 TTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAG
* * *
2703638 AAAAGATTCCCATGCAAAAGAAAATCATCATTATCATTTATCCCAATGAGGAGAATGTGTTTATA
256 AAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATA
* * * * *
2703703 GTGCCTAATCAGAAAATGAATGAAGATCAATA-TGAGAATCTATGTTTATCCCTTTTGAAGCATG
321 GTGCCTAATCACAAAATGAATGAAGATCAATACT-AGAATCCATGTTTGTCTCTTTTGAAGCACG
* * * *
2703767 AACTTAGA-TATTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGTGAAACAAAAGCGTCAAAATG
385 AACTTAGACT-TTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATG
* *
2703831 ATGTATCCCAATGAGAAGAAAATG
449 ATGTATCCTAATGAGAAGACAATG
2703855 TTTATGGTGCCTAAT-CTGGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
* * *
2703919 GAGACAAACTTTGATTCCATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACCCCAAAGCATT
65 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGA-CCCAAAGCATC
** * * * *
2703984 AATTTCATGTATCCTAATGAAAAGAATGTGTTTTGGCTACGATTTTCATATAG-ATGGAGATTAT
129 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTC-ATTCTCATAAAGAAT-GAGATTGT
* * * *
2704048 TACGAGAATTGATGCTTGTCTTATTTACGGGATGAATTTTGATTTAAAGGAAAATAGGGTAAAGA
192 TACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGA
* * *
2704113 AAATG-TCTCCATGCAAAAGTAAATCGTCAATATCATTTATCCT-ATAGAGGAGAATGTGTTTAT
257 AAA-GATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAAT-GAGGAGAATGTGTTTAT
* *
2704176 AGTGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGCCTCTTTTGAAGCATG
320 AGTGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACG
* * * *
2704241 AACTTAAACTTTATAAAAAATGGTGGGAAAAATGCCTTTCTTGCAAAACGAAAGCATCAATATGA
385 AACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGA
*
2704306 TGTATCC-AACGAGAAGACAATG
450 TGTATCCTAATGAGAAGACAATG
* * * * *
2704328 TTCATGGTGCCTAGTCCGGAAAAGAATGGGGATTAGTATGA-TATTCATGTTTGTCTTAATTAAA
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
* * *
2704392 AGACAAACTTTGATTCTAACAAAAACGGTGGAAGGAAAAGTTTTTCTTGCAACACCAAAGCATCA
66 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGAC-CCAAAGCATCA
* *
2704457 ATTTCATGTA-CCTAATGAAGAGAATGTGTTTTGGCTTCATAATC-CGGA-AAAGAACTGAGATA
130 ATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCAT--TCTC--ATAAAGAA-TGAGATT
* * * * * * *
2704519 GTTACGAGAATCGATTCATATCTTATTTAAGGTACGAACATTGTTTTAAAGGAAAATA-GGCAAA
190 GTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAA
* * * * *
2704583 GAAAAGATTCCCATGCAAAAGAAAATCATCATTATCATTTATCCCAATAAGGAGAATGTGTTTGT
255 GAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTAT
* * * * * *
2704648 AGTGCCTAATCATAAAATGAATGAAGATCATTGCGAGAATCCATGTTTGTCCCTTTTGTAGCACG
320 AGTGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACG
*
2704713 AACTTAGACATTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGA
385 AACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGA
2704778 TGTATCCTAATGAGAAGACAATG
450 TGTATCCTAATGAGAAGACAATG
* * * *
2704801 CTTATGGTGCCTAAT-CTAGAAAAGAATGGGGATTAGAATGAGTATTCATGTTTGTCTTTTTTAC
1 TTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
* * *
2704865 GAGACAAACTTTGATTCTATCAAAAACGATGGAAGGAAAAGTTTTTCTTGCAACACCAAAGCATC
65 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGAC-CCAAAGCATC
* ** *
2704930 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGGTTCATAATCATGAATAGAACTGAGATAG
129 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCATTCTCAT-AA-AGAA-TGAGATTG
* * * * * * * * *
2704995 TTATGAGAGTCGATTCTTATCTTATTTAAGGTATGAACATTGTTTTAAAGGAAAATA-AGCAAAA
191 TTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAG
* * * *
2705059 AAAAGATTCCCATGCAAAAGAAAATCATCATTATCATTTATCCCAATGAGGAAAATGTGTTTATA
256 AAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATA
* * * * * * *
2705124 GTGCCTAAACACAAAATGAATGAAGACCATTACGAGAATCTATGTTTATCCCTTTTGAAGCACGA
321 GTGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGA
* *
2705189 ACTTAGACATTACAAAAAATGGTGGGAAAAAAG-CTTTCTTGCGAAATGAAAGCATCAATATGAT
386 ACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGAT
*
2705253 GTATCCTAATGAGAAGACAACG
451 GTATCCTAATGAGAAGACAATG
* ** * *
2705275 TTTATGGTACCTAATCAGGAAAATAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAG
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
* * * *
2705340 AGATAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACCCTGAAGCATCA
66 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACCC-AAAGCATCA
* * * * * ** * **
2705405 ATTGCACGTATCCTAATAAAGGGAATGTCTTTTAGCTTCATAATCATGAAAAGAACTAAGACAGT
130 ATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCATTCTCAT--AAAGAA-TGAGATTGT
* * ** * * * * * * * *
2705470 TATGGGAATTAATTCTTATCATATTTAAGGTACGAACATTGTTTTAAAGGAAAATA-GGAAAAGA
192 TACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGA
* * * * * * * * *
2705534 AAATATTCCCATGCAAAAAGAAAATCAACATTGTTATTTATCCTCATGAGGAGAATATGTTTGTA
257 AAAGATTTCCATGC-AAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATA
*
2705599 GTGCCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCTTTTGAAGCACGA
321 GTGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGA
* * *
2705664 ACTTAGACTTTAAAAAAAATGGTGGGAAAAAAGCCTTTCTTGTGAAACGAAAGCATCAAGATGAT
386 ACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGAT
* *
2705729 GTATCCTAAAGAGAAGACTATG
451 GTATCCTAATGAGAAGACAATG
* * * * *
2705751 TTTAAGTTGCCTTATCCTGAAAAGAATGGGGATTAGTATGAGAATTCATGTTTGTCTTATTTAAC
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
* * * * * *
2705816 AGACAAACTTTGATTTTATCAAAAAAGGTGGAAGAAAAAGTTTTTGTTTCGACACTAAAGCATCA
66 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGAC-CCAAAGCATCA
* * *
2705881 ATTTCATGTATCCTAATGAAGGAAACGTGTTTTGGCTCCGATTCTCATAAAGAATGAAGATTGTT
130 ATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTC-ATTCTCATAAAGAATG-AGATTGTT
* * *
2705946 ACGAGAATTGATGCTTGTCTTATTTAAGGGATAAAGTTTGATTTAAAGGAAAATAGGGCAAAGAA
193 ACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAA
* * * * * *
2706011 AAGATTTCCATGCAGAATAAAATCGTCAATATCATTTACCCTATTAAGGAGAATGTGTTTATAGT
258 AAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
* *
2706076 GCCTAATCACAAAATGAATCAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCCCGAAC
323 GCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAAC
* * * *
2706141 TTAGACTTCATAAAAAATGGT-GGAAAAAATGCCTTTTTTGCGAAACAAAAGCATCAATATGATG
388 TTAGACTTTACAAAAAATGGTGGGAAAAAA-GCCTTTCTTGCGAAACGAAAGCATCAATATGATG
2706205 TATCC--ATCGAGAAGACAATG
452 TATCCTAAT-GAGAAGACAATG
* * *
2706225 TTTATGGTGCCTAATCCGGAAAAGAATGGGGATTAGTGA-GAGTATTAATCTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGT-ATGAGTATTCATGTTTGTCTTATTTAA
* *
2706289 GAGATAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACCCTAAAGCATC
65 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACCC-AAAGCATC
* * *
2706354 AATTTCATGTATCCCAATGAAGGGAATGTGTTTTGGC-TCAGATTTTCGTAAAGAATAGAGATTG
129 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTC--ATTCTCATAAAGAAT-GAGATTG
* *
2706418 TTACGAGAATTGAT-CTTGTCTTATTTAAGTGATGAACTTTGATTTAAAGGAAAATAGGGCAAAG
191 TTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAG
* *
2706482 AAAAGGTTTCCATGCAAAAAAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATA
256 AAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATA
*
2706547 GTGCCTAA-CGACAAAATGAATGAAGATCAATACTAGAATCCATGTCTGTCTCTTTTGAAGCACG
321 GTGCCTAATC-ACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACG
* *
2706611 AACTTAGAC-TTACAAAAAATGGTGGGAAAAATGCCTTTCTTGCGAAACGAAAGCATCAATATGT
385 AACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGA
2706675 TGTATCC-AATGAGAAGACAATG
450 TGTATCCTAATGAGAAGACAATG
* *
2706697 TTTGTGGTGCCTAATCC-GAAAAAGAAT-GGGATTAGTATGAGTATTCATGTTTATCTTATTTAA
1 TTTATGGTGCCTAATCCTG-AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
* *
2706760 GAGACAAACTTTGATTCTATCAAAAATGGTGAAAGGAAAAGTTTTTCTTGTGACCCGAAAGCATC
65 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACCC-AAAGCATC
* * *
2706825 AATTTCATGTATCCTAATGATGGAAATGTGTTTTGGCTCTGATTTTCTCATAAAGAATGGAGATT
129 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCT-TCA--TTCTCATAAAGAAT-GAGATT
* *
2706890 ATTACGAGAATCGATGCTTGTCTTATTTACGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAA
190 GTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAA
* * * *
2706955 GAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTGTCCTAAGGAGGAGAATGTGTTCAT
255 GAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTAT
* * *
2707020 AGTGCCTAATCAC-AAATGAATGAAGA-CAATTACGAGAATCCATGTTTGTTTTTTTTGAAGCAC
320 AGTGCCTAATCACAAAATGAATGAAGATCAA-TACTAGAATCCATGTTTGTCTCTTTTGAAGCAC
* * * *
2707083 GAACTTAGACTTTGCAAAAAATGGTGAGAAAAAAGACTTTCTTGCGAAACGAAAGCAACAATATG
384 GAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATG
* *
2707148 ATGTATCCTAATGAGTAGACTATG
449 ATGTATCCTAATGAGAAGACAATG
* * * * * * *
2707172 TTTGTGTTGCCTTATCCTCAAAAGAATGGGGATTAGTATGAATATT--TATATGTCTTATTTAAG
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
*
2707235 AGACAAACTTTGATTCTATCAAAAACT-GTGGAAGGAAAAGTTTTTCTTGCAACACCAAAGCATC
66 AGACAAACTTTGATTCTATCAAAAA-TGGTGGAAGGAAAAGTTTTTCTTGCGAC-CCAAAGCATC
** * * *
2707299 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCATAATCATGAATGGAACTAAGATAG
129 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCATTCTCAT-AA-AGAA-TGAGATTG
* * * * * * *
2707364 TTAC-AGGAATCGATTCTTATGTTATTTATGGTATGAACATTGTTTTAAA-GAAAATA-GGCAAA
191 TTACGA-GAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAA
* * * * *
2707426 TAAAAGATTCCCATGCAAAAGAAAATCATCATTATCATCTATCCCAATGAGGAGAATGTGTTTAT
255 GAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTAT
* * *
2707491 AGTGCCTAATGC-CACAATGAATGAAGATCAATA-TGAGAATCTATGTTTGTCCCTTTTGAAGCA
320 AGTGCCTAAT-CACAAAATGAATGAAGATCAATACT-AGAATCCATGTTTGTCTCTTTTGAAGCA
* ** * * *
2707554 CGAACTTAGA-TATTACAGAAAATGGTGGGAAAAAAGAGTTTCTTGTGAAACAAAAGCGTCAATA
383 CGAACTTAGACT-TTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATA
* * *
2707618 TGATGTATCCCAATTAGAAGAAAATG
447 TGATGTATCCTAATGAGAAGACAATG
* * * *
2707644 TATATGGTGCCTAATCCGGAAAAGAATGAGGATTAGTATGAGTATTCATGATTGTCTTATTTAAG
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
* * *
2707709 AGATAAACTTTAATTCTATCAAAAATGGTGGAAGAAAAAGTTTTTCTTGCGACTCCAAAGCATCA
66 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGAC-CCAAAGCATCA
* ** * **
2707774 ATTGCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCATAATCAAGAAAAGAACTGAGACAGT
130 ATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCATTCTC-A-TAAAGAA-TGAGATTGT
* * * * * * * * *
2707839 TATGAGAATTGATTCTTATCTTATTTAAGGTATGAACATTG-TCTCAAAGGAAATTA-GCCAAAG
192 TACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGAT-TTAAAGGAAAATAGGGCAAAG
* * *
2707902 AAAAGA-TCCTCATGCAAAAGAAAATCATCATTATCATTTATCCTAATGAGGAGAATATGTTTAT
256 AAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTAT
* *
2707966 AGTGCCTAATCACAAAATGAATGAAGATCATTACGAGAATCCATGTTTGTCTCTTTTGAAGCACG
320 AGTGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACG
* * * * ***
2708031 AACTTAGACTTTACAAAAAATAGTGGGAAAAAAGTCTTTCTTGTGAAACAAAAATGTCAATATGA
385 AACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGA
*
2708096 -GTATCCTAATTAGAAGACAATG
450 TGTATCCTAATGAGAAGACAATG
* * * * *
2708118 TTTATGGTGCCTAAT-CTGGAAAAGAATAGGGATTAATATGAATATTCTTGTTTGTCTTATTTAT
1 TTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
*
2708182 GAGGCAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACCCCAAAGCATC
65 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGA-CCCAAAGCATC
* * * * *
2708247 AATTTCATGTATCCT--T-CAGGGTATGTGTTTTGGCTCTGATTCTCGTAAAAAATGGAGATTGT
129 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCT-TCATTCTCATAAAGAAT-GAGATTGT
* * * * *
2708309 TACAAGAATCAATGTTTATTTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGA
192 TACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGA
* *
2708374 AAAGATTTCCAT-CAAAAGAAAATCATCAATACCATTTATCCTAATGAAGAGAATGTGTTTATAG
257 AAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAG
* * * * * * * * *
2708438 TGCCTAATGACAAATTGAATGAAGATGAATTCTAGAATTCATGTTTATCTTTTTTGAAGTACGTA
322 TGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAA
* * *
2708503 CTTAGACTTTA-AAAAAATGGGGGGAAAAATG-CTTTCTTGTGAAACGAAAGCATCAATATGATG
387 CTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATG
* * *
2708566 CATCCTAAAGAGAAGACTATG
452 TATCCTAATGAGAAGACAATG
* * * * *
2708587 TTTATAGTGCCT-TTTCTGAAAAAGAATGCGGATTAGTGTGAGTATTCATGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCTG-AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
* * * ***
2708651 TAGACAAACTTCGATTCTATCAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGATAATAAAGCATC
65 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGA-CCCAAAGCATC
* *
2708716 AATTTCATGTATCCTAATGAAGGGAATATGTTTTGGCTCCGATTCTCATAAAGAATGGAGATTGT
129 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTC-ATTCTCATAAAGAAT-GAGATTGT
* * * * * * *
2708781 TATGATATTCGATGTTTCTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGAGCAGAGA
192 TACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGA
* * *
2708846 AAATATTTCCATGCAAAAGAAAATCATCAATGTCATCTATCCTAATGAGGAGAATGTGTTTATAG
257 AAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAG
* * * * *
2708911 TGCCTAATCACAAAATTAATGAAGATCATTATTAGAATCCTTGTTTGTCTCTTTTGAAGCATGAA
322 TGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAA
* * * * * * * **
2708976 CTTTGACTTTACAGAAAATGGTGGGAAAAAAGCCTTACTTGTGAAGCGAAAGCGTTAATCGGATG
387 CTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATG
2709041 TATCCTAATGAGAAGACAATG
452 TATCCTAATGAGAAGACAATG
* *
2709062 TTTATGGTGCCTAATTCGGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
** ** *
2709127 AGACAAACTTTGATTCTATCAAAAACAGTGGAAAAAAAAGTTTTTCTTGCAACCCTAAAGCATCA
66 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACCC-AAAGCATCA
* * * * *
2709192 ATTTCAAGTATCCTAATGAAGGGAATGTGGTTTGGCTCTGATTTTCATGAAGAATGGAGATTGTT
130 ATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCT-TCATTCTCATAAAGAAT-GAGATTGTT
* * * *
2709257 ACGAGAATCGATGCTTGTTTTATTTAAGAGATGAACATTGATTTAAAGGAAAATAGGGCAAAGGA
193 ACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAA
* * *
2709322 AAGATTTCCATGTAAAAGAGAATCATCAATATCATTTATCGTAATGAGGAGAATGTGTTTATAGT
258 AAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
* *
2709387 GCCTAATGACAAAATGAATGAAGCA-CAATACTAGAATCCAAGTTTGTCTCTTTTGAAGCACGAA
323 GCCTAATCACAAAATGAATGAAG-ATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAA
* * * * *
2709451 CCTAGGCTTTATAAAAAATGGTGGGAAAAATGCCTTTCTTGCGAAATGAAAGCATCAATATGATG
387 CTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATG
* * *
2709516 TA-CCCAATGATAAGATAATG
452 TATCCTAATGAGAAGACAATG
* ** *
2709536 TTTATGGTGCCTAAT-TTAGAAAAGAATGGGGATTAGTACAAGTATTCATGTTTGTGTTATTTAA
1 TTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
* ** ** *
2709600 GAGACAAACTTTGATTCTAT-AAGAAACGGTAAAAAAAAAAGTTTTTCTTGCAACCACAAAGCAT
65 GAGACAAACTTTGATTCTATCAA-AAATGGTGGAAGGAAAAGTTTTTCTTGCGACC-CAAAGCAT
* * *
2709664 CAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCACAATCTTGA-AAAGAACTGAGAC
128 CAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTT--CATTC-TCATAAAGAA-TGAGAT
* * * * * * *
2709728 AGTTACGAGAATCGATTCTTGTCTTTTTTACGGTATGAACTTTGTTTTAAAGGAAAATA-GACAA
189 TGTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAA
* * * * * * *
2709792 TGGAAAGATTCCCATGTAGAAGAAAATCATGAATATCATTTATCCTAATGAGGAGAATATGTTTA
254 AGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTA
* * * * * *
2709857 TAGTACCTAATCAAAAAATGAATGAAGATCATTACTAGAATCCAAGTTTGTCTC--ATGAAGCAA
319 TAGTGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCAC
* * *
2709920 GAACTTAGACTTTACAAAAAATGGTGGAAAAAAAGCCTTTCTTGCGAAACGGAAGCATTAATATG
384 GAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATG
* * * *
2709985 ATGTATCATAATAAAAAGACAACG
449 ATGTATCCTAATGAGAAGACAATG
* * * * * * *
2710009 TTTATGGTGCCTAATACAGAAAAGATTGGGGACTAGTGTTGAGTTTTCATGTTTGTCTTATTGAA
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGT-ATGAGTATTCATGTTTGTCTTATTTAA
* * * ** * * * *
2710074 GAGACAAACTCTGTTTCTATAAAAAATTATGGAAAGAAAAGTTTTTCTTGCGGCATCAAAGCATT
65 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGAC-CCAAAGCATC
* * * * * * **
2710139 AGTGTCATGTATCCTAATGAAGGGTATTTGTTTTGGCTTCACAATCTTGA-AAAGAACTGAGACA
129 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTT--CATTC-TCATAAAGAA-TGAGATT
* * * * * * * *
2710203 CTTACAAGAATCGATTCTTATCATATTTAAGGTATGAACATTGTTTTAAAGGAAAATA-GGCAAA
190 GTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAA
* * * ** *
2710267 GAAAAGA-TTCGCATACAATAGAAAATCGTCAGCATCATTTATCCTAATGAGGTGAATGTGTTTA
255 GAAAAGATTTC-CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTA
* * * *
2710331 TAGTGCCGAA-CGACAAAATGAATGAAGATCATTACTAGAATCTAGGTTTGTCTCTTTTGAAGCA
319 TAGTGCCTAATC-ACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCA
* *
2710395 CGAACTTAGACTTTACAAAAAATGGTGGGAAAAATGCCTTTCTTGC-AGAACGAATGCATCAATA
383 CGAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGA-AACGAAAGCATCAATA
*
2710459 TGATGTATCC-AATGAGAAGACAGTG
447 TGATGTATCCTAATGAGAAGACAATG
* * * *
2710484 TTTGTGGTGCCTAATTCC-AAAAAGAATGGGGATTAGTATGTGTATTCAAGTTTGTCTTATTTAA
1 TTTATGGTGCCTAA-TCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
* * *
2710548 GAGATAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGTGACCCTATAGCATC
65 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACCC-AAAGCATC
* * * * ** *
2710613 AATTTCATGTATCCTAATGAAGAGAATCTGCTTTGGCTCTTATTCTTGTAAAGAATAGAGATTTT
129 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCT-TCATTCTCATAAAGAAT-GAGATTGT
* *
2710678 TATGAGAATC-AGTGCTTGTCTTATTGAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAG
192 TACGAGAATCGA-TGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAG
* * * *
2710742 AAAAGATTTCCATGCAAAAGAAAATCATCAATATCAATTATCCTAATGAGGAGAATTTGTTTGTG
256 AAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATA
* * * * *
2710807 GTGCCTAA-CAACAAAATGAATGAAGATCAAAACTGGAATCCATG-CTATCTCTTTTGAAGCATG
321 GTGCCTAATC-ACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACG
* * * *
2710870 AACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCATTTCTTGCAAAATGAAAGCGTCAATATGA
385 AACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGA
* *
2710935 TGTATCCTAATGATAAGAAAATG
450 TGTATCCTAATGAGAAGACAATG
* * *
2710958 TTTATGGTGCTTAATCCAGAAAAGAATGGGGATTAGTATGAGTATTCATTTTTGTCTTATTTAAG
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
* ** ***
2711023 AGACAAACTTTGATTTTATCAAAAACAGTGGAAGGAAAAGTTTTTCTTATTACCCCAAAGCATCA
66 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGA-CCCAAAGCATCA
* * *** *
2711088 ATTTCATGTATCCTAATTAAGAGAATGTGTTTCATCTCTGATTCTCATAAAGAATGGAGATTGTT
130 ATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCT-TCATTCTCATAAAGAAT-GAGATTGTT
* *
2711153 ACGAGAATCGATGCTTGTCTTACTTAAGGGATGAATTTTGATTTAAAGGAAAATAGGGCAAAGAA
193 ACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAA
* * *
2711218 AAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGAATAATGTGTTTATAGT
258 AAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
* * *
2711283 G------C-C----T-AAT---GA-CAA-AAT-GAATCCATGTTTGTCT-TTTCTAAAGCACGAG
323 GCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTT-TGAAGCACGAA
* * ** * ** *
2711329 CTTAGACTTTACAAAAAAT-GTGAGAAAAATGCCTTTCTTGTAAAAAGAAAGTGTCAA-ATGGTG
387 CTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATG
2711392 TATCCTAATGAGAAGACAATG
452 TATCCTAATGAGAAGACAATG
* * *
2711413 TTTATGGTGCCTAGTCC-GAAAAAAGAATGGGGATTAGTGTGAGTATTCTTGTTTGTCTTATTTA
1 TTTATGGTGCCTAATCCTG--AAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTA
* * *
2711477 AAAGGCAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAGGTTTTTCCTT-CGACCCTAAAGCA
64 AGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTT-CTTGCGACCC-AAAGCA
* * * * * *
2711541 TCAATTTTATGCATCCTAATGAAGGAAATGTGTTTTGGCTCCGATTCTCGTAAACAATGGAGATT
127 TCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTC-ATTCTCATAAAGAAT-GAGATT
* * *
2711606 GTTACGAGAATCGATGCTTATCTTATTTAAGGGATGAACTTTGATTTAAAAGAAAACAGGGCAAA
190 GTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAA
* * *
2711671 GAAAAGATTT-CATGCAAAAGAAAATCATCAATATCATTTATCCTAAAGAGAATAATGTGTTTAT
255 GAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTAT
* * * * *
2711735 AGTGGCTAATGACAAAATGAATGAAAATCAATACTAGAGTCCATGTTTGTCTCTTTTGAAGCATG
320 AGTGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACG
* * * * * **
2711800 AACTTAGACTTTACAAAAAAAGGTGGG-AAAATGCCTTTCTTGCAAAATGAAAGCGTCAATAAAA
385 AACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGA
*
2711864 TGTATCC-AACGAGAAGACAATG
450 TGTATCCTAATGAGAAGACAATG
* * * *
2711886 TTTGTGGAGCCTAAT-CTAGAAGAGAAT-GGGATTAGTACGAGTATTCATGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
*
2711949 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAGGTTTTTCCTT-CGACCCTAAAGCAT
65 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTT-CTTGCGACCC-AAAGCAT
* * * * * *
2712013 CAATTTTATGCATCCTAATGAAGGAAATGTGTTTTGGCTCCGATTCTCGTAAACAATGGAGATTG
128 CAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTC-ATTCTCATAAAGAAT-GAGATTG
* * *
2712078 TTACGAGAATCGATGCTTATCTTATTTAAGGGATGAACTTTGATTTAAAAGAAAACAGGGCAAAG
191 TTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAG
* * *
2712143 AAAAGATTT-CATGCAAAAGAAAATCATCAATATCATTTATCCTAAAGAGAATAATGTGTTTATA
256 AAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATA
* * * * *
2712207 GTGGCTAATGACAAAATGAATGAAAATCAATACTAGAGTCCATGTTTGTCTCTTTTGAAGCATGA
321 GTGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGA
** * * * * **
2712272 ACTTAGACTTTACAAAAAAAAGTGGG-AAAATGCCTTTCTTGCAAAATGAAAGCGTCAATAAAAT
386 ACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGAT
*
2712336 GTATCC-AACGAGAAGACAATG
451 GTATCCTAATGAGAAGACAATG
* * * *
2712357 TTTGTGGAGCCTAAT-CTAGAAGAGAAT-GGGATTAGTACGAGTATTCATGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA
* *
2712420 GAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCAACCCCAAAGCATC
65 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGA-CCCAAAGCATC
* * * *
2712485 AATTTCATGTATCCTAATGAAGGGAATGTGCTTTGGCTCTGATTCTCGTAAAGAATGGAGATTAT
129 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCT-TCATTCTCATAAAGAAT-GAGATTGT
* * *
2712550 TAGGAGAATCAATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATTGGGCAAAGA
192 TACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGA
* * *
2712615 AAAGATTTCCAAGCAAAAGAAAATCATCAATATCATTTATCCTGATGAGGAGAATTTGTTTATAG
257 AAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAG
* * ** * *
2712680 TGCCTAATGACAAAATGAACGAAGATCAATACTAGAATCCATGTTTGTCTCCATTAAAGCACAAA
322 TGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAA
* * *
2712745 CTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGTGAAATGAAAGCGTCAATATGATG
387 CTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATG
* *
2712810 TATCCTAAAGAGAAGACTATG
452 TATCCTAATGAGAAGACAATG
* * * ** * * *
2712831 TTTATAGTGCCTTATCCTGAAAAGAATTGGGATTAGTGCGAGTATTCATGTTTGCCTTTTTTGAG
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
*
2712896 AGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACCCCAAAGCATCA
66 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGA-CCCAAAGCATCA
* * * *
2712961 ATTTCATGTATCCTAATGAAGGGAATGTGCTTTGGCTCTGATTCTCATAAAAAATGGAGATTATT
130 ATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCT-TCATTCTCATAAAGAAT-GAGATTGTT
* * * *
2713026 AGGAGAATCGATGCTTGTCTTATTTAAGGGATGAATTTTGTTTTAAATGAAAATA-GGCAAAGAA
193 ACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAA
* * * * *
2713090 AAGATTTCCAGGCAAATGAAAATCATCAATATCATTTATCCTAATGTGGAGAATTTGTTTGTAGT
258 AAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGT
* * ** *
2713155 TCCTAATGACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCCATTGAAGCACAAAC
323 GCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAAC
* * * *
2713220 TTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTTTTGCAAAATGAAAGCGTCAATATGATGT
388 TTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGT
* *
2713285 ATCCTAAAGAGAAGACTATG
453 ATCCTAATGAGAAGACAATG
* * * * *
2713305 TTTATAGTGCCTTATCCTGAAAAGAATAGGGATTAGTGTGAGTATTCATGTTTGTCTTATTTGAG
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
** * *
2713370 AGACAAACTTTGATTCTATCAATAAA-GGTGGAAATAAAAGTTTTTCTTGTGACCCCAAAGCATT
66 AGACAAACTTTGATTCTATCAA-AAATGGTGGAAGGAAAAGTTTTTCTTGCGA-CCCAAAGCATC
* * ** * * *
2713434 AATTTCATGTATCCTAATTATGGGAATGTGCATTAGCTTTGATTCTCGTAAAGAATGGAGATTGT
129 AATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGC-TTCATTCTCATAAAGAAT-GAGATTGT
* * *
2713499 TACGAGAGTCGACGCTTGTCTTATTTAAGAGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGA
192 TACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGA
* * * *
2713564 AAAGATTTTCATGCAAAAGAAAATCATTAATATCATTTATCCTAATGAGAATAATGTGTTTATAG
257 AAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAG
* *
2713629 TG-------AC----T-AAT---GA-CAA-AAT-GAATCCATCTTTGTCT-TTTCTGAAGCACGA
322 TGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTT-TGAAGCACGA
* * *
2713675 ACTTAGACTTTACAAAAAAT-GTGGGAAAAATGCCTTTCTTGC-AAACAGAAAGCGTCAATATGG
386 ACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAAC-GAAAGCATCAATATGA
2713738 TGTATCCTAATGAGAAGACAATG
450 TGTATCCTAATGAGAAGACAATG
*
2713761 TTTATGGTGCCTAAT-CTGGAAAAGAATGGGGATTAGTATGAGTATTCTTTGTTTGTCTTATTTA
1 TTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGAGTATTC-ATGTTTGTCTTATTTA
* * * *
2713825 AAAGGCAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAGGTTTTTCCTTG-GACCCTAAAGCA
64 AGAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTT-CTTGCGACCC-AAAGCA
* * * * * *
2713889 TTAATTTTACGCATCCTAATGAAGGGAATGTGTTTTGGCTCCAATTCTCATAAACAATAGAGATT
127 TCAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTC-ATTCTCATAAAGAAT-GAGATT
* * * * *
2713954 GTTATGAGAATCGAAGCTTTTCCTATTTAAGGGATGAGCTTTGATTTAAAGGAAAATAGGGCAAA
190 GTTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAA
* * *
2714019 GAAAAGATATCTATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGGTTAT
255 GAAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTAT
* *
2714084 AGTGCCTAA-CGACAAAATGAATGAAAATCAATACTAGAATCCATGTTTGTCTTTTTTGAAGCAC
320 AGTGCCTAATC-ACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCAC
* *
2714148 GAACTTAGACTTTAC-AAAAATGGTGGG-AAAATGCCTTTCTTGCGAAACGAAAGCATCAATTTG
384 GAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATG
2714211 ATGTATCC-AATGAGAAGACAATG
449 ATGTATCCTAATGAGAAGACAATG
* **
2714234 TTTGTGGTGCCTAATCCAAAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA-
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
* * * * *
2714298 ACAGCAAACTTTGATTCTATAAAAAATGGTGGAAGGAAAAGTTTTT-TCGGGGACCCTATAGCAT
66 AGA-CAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCT-TGCGACCC-AAAGCAT
* * * * * *
2714362 CAATTTCATGTATCCTAATGATGGAAATGTGTTTTGGCTCTGATTTTCGTAAAGAAAGGAGATTG
128 CAATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCT-TCATTCTCATAAAG-AATGAGATTG
* *
2714427 TTACGAGAATCGATGCTTGTCTTATTTAAGAGATGAACTTTGATTTAAAGGAAAACAGGGCAAAG
191 TTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAG
*
2714492 AAAAGATTT-CATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGGATGTGTTTAGT
256 AAAAGATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTA-T
* * * * *
2714556 -GTGCCTAATGATAAAGTGAATGAAAATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCATG
320 AGTGCCTAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACG
* * * * * **
2714620 AACTTAGACTTTACAAAAAATCGTGGGAAAAATGCCTTTCTTGCAAAATGAAAGCGTCAATAAAA
385 AACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGA
*
2714685 TGTATCC-AACGAGAAGACAATG
450 TGTATCCTAATGAGAAGACAATG
* * * * *
2714707 TTTGTGGAGCCTAATCCAGAAGAGAAT-GGGATTAGTACGAGTATTCATGTTTGTCTTATTTAAG
1 TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
*
2714771 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCAACCCCAAAGCATCA
66 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGA-CCCAAAGCATCA
* *
2714836 ATTTCATGTATCCTAATGAAGGGAATGTGCTTTGGCTCTGATTCTCATAAAGAATG
130 ATTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCT-TCATTCTCATAAAGAATG
2714892 GACATTGAAA
Statistics
Matches: 10504, Mismatches: 1247, Indels: 468
0.86 0.10 0.04
Matches are distributed among these distances:
454 1 0.00
455 104 0.01
456 359 0.03
457 310 0.03
458 9 0.00
459 5 0.00
460 2 0.00
462 4 0.00
463 4 0.00
464 3 0.00
466 1 0.00
467 4 0.00
468 31 0.00
469 163 0.02
470 175 0.02
471 1079 0.10
472 1494 0.14
473 1338 0.13
474 3349 0.32
475 1751 0.17
476 311 0.03
477 7 0.00
ACGTcount: A:0.36, C:0.13, G:0.19, T:0.31
Consensus pattern (472 bp):
TTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACCCAAAGCATCAA
TTTCATGTATCCTAATGAAGGGAATGTGTTTTGGCTTCATTCTCATAAAGAATGAGATTGTTACG
AGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGCAAAGAAAAG
ATTTCCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATGTGTTTATAGTGCC
TAATCACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCTTTTGAAGCACGAACTTA
GACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCGAAACGAAAGCATCAATATGATGTATC
CTAATGAGAAGACAATG
Found at i:2706836 original size:157 final size:156
Alignment explanation
Indices: 2702435--2714854 Score: 1290
Period size: 158 Copynumber: 78.9 Consensus size: 156
2702425 ACTTGTCTTA
* * * * *
2702435 TTTATGGTGCCTAATCCGGAAAAGAATGGGGATTAGTATGAGTATTCATCTTTGTCTTATTTAAG
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAAG
* * *
2702500 AGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGC-AACCCTAAAGCATC
66 AGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAA-ACGAAAGCATC
* **
2702564 AATTTCATGTATCCCAAT--GAAGGGAATG
128 AATATCATGTAT-CCAATGAGAAGACAATG
* ** * * * * * *
2702592 TGTTTTGGCT-CAGATTTTCG-TAAAGAATAGAGATT-GTTACGAGAATTGAT-CTTGTCTTATT
1 T-TTATGG-TGCCTA-ATCCGAAAAAGAATAGAGATTAG-TATGAGAATTCATGTTTGTCTTATT
* ** * * * * * * * **
2702653 TAAGGGATGAACTTTGAATTAAAGGAACATATGG-CAAA-GAAAAGGTTTCCATGCTAAAAAAAA
62 TAAGAGACAAACTTTGATTTACA--AA-A-ATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAA
* * *
2702716 TCATCAATATCATTTATCCTAATGAGCAA-A-ATGTG
123 GCATCAATATCATGTATCC-AATGAG-AAGACA-ATG
* * * * *
2702751 TTTATAGTGCCTAA--AGACAAAATGAAT-GAAGATCAGTACT-AGAATCCATGTCTATCTCTT-
1 TTTATGGTGCCTAATCCGA-AAAA-GAATAG-AGATTAGTA-TGAGAATTCATGT-T-TGTCTTA
* * * * **
2702811 TTGAAG-CACGAACTTAGACTTTACAAAAAATGGTG---GGAAAAATGCCTTTCTTGCGAAACGA
60 TTTAAGAGACAAACTTTGA-TTTAC-AAAAATGGTGAAAGG-AAAA-GTTTTTCTTGCGAAACGA
**
2702872 AAGCATCAATATGTTGTATCCAATGAGAAGACAATG
121 AAGCATCAATATCATGTATCCAATGAGAAGACAATG
* * * * * * *
2702908 TTTGTGGTGCCTAATTCGGAAAAGAAT-GGGATTAGTAGGAGTATTCATGTTTGTCTAATTTAAG
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAAG
* * ** *
2702972 AGACAAACTTTGATTCTATCAAAAACGGTGAAAGGAAAAGTTTTTCTTGTGACCCCAAAGCATCA
66 AGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCATCA
* * *
2703037 ATTTCAAGTATCCTAATGA-AGGA-AATG
129 ATATCATGTATCC-AATGAGAAGACAATG
* * * * * * * ** *
2703064 TGTT-TTG-GCTTTGATTTTCG-TAAAGAATGGAGATTATTACAAGAA-TCGATGCTTGTCTTAT
1 T-TTATGGTGC-CT-A-ATCCGAAAAAGAATAGAGATTAGTATGAGAATTC-ATGTTTGTCTTAT
* * ** * * * * *
2703125 TTACGGGATGAACTTTGATTTAAAGGAAAATAGG-GCAAA-GAAAAGATTTCCATGC-AAAAGAA
61 TTAAGAGACAAACTTTGATTTACA--AAAAT-GGTG-AAAGGAAAAGTTTTTCTTGCGAAACG-A
* * * * *
2703187 AATCATCAATATCATTTGTCCTAATGAGGAGA-ATGTG
121 AAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* ** ** * *
2703224 TTTATAGTGCCTAAT-C-ACAATTGAAT-GAAGACCATTACT-AGAATCCATGTTTGTCTCT-TT
1 TTTATGGTGCCTAATCCGA-AAAAGAATAG-AGATTAGTA-TGAGAATTCATGTTTGTCT-TATT
* * * * **
2703284 TGAAG-CACGAACTTAGACTTTGCAAAAAGTGGTGAGAA--AAAAGACTTTCTTGCGAAACGAAA
62 T-AAGAGACAAACTTTGA-TTTACAAAAA-TGGTGA-AAGGAAAAGTTTTTCTTGCGAAACGAAA
* * *
2703346 GCAACAATA-CGATGTATCTTAATGAGAAGACTATG
123 GCATCAATATC-ATGTATC-CAATGAGAAGACAATG
* * * * ** *
2703381 TTTATGTTGCCTTATCCTG-AAAAGAATGGGGATTAGTATGAGTTTTTATGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCC-GAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * *
2703445 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCCTGC-AACACCAAAGCAT
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAA-ACGAAAGCAT
* * * *
2703509 TAATTTCATGTATCTTAATGA-AAGGA-ACGTG
127 CAATATCATGTATC-CAATGAGAA-GACA-ATG
* * * * * ** * *
2703540 TTT-TGGCTTCATAATCATG-AAAGGAACTAAGACATT--TGCGGGAA-TCGAT-TCTTATCTTA
1 TTTATGG-TGCCTAATC-CGAAAAAGAA-T-AGAGATTAGTATGAGAATTC-ATGT-TTGTCTTA
* * * * * * * ** * *
2703599 TTTAAG-GTACGAACATTGTTTTAAAGAAAATAGG-CAAA-TAAAAGATTCCCATGC-AAAAGAA
60 TTTAAGAG-ACAAACTTTGATTTACA-AAAAT-GGTGAAAGGAAAAGTTTTTCTTGCGAAACG-A
* * * * *
2703660 AATCATCATTATCATTTATCCCAATGAGGAGA-ATGTG
121 AAGCATCAATATCATGTAT-CCAATGAGAAGACA-ATG
* * * * * * *
2703697 TTTATAGTGCCTAATCAGAAAATGAAT-GAAGATCAATATGAGAA-TCTATGTTTATCCCT-TTT
1 TTTATGGTGCCTAATCCGAAAAAGAATAG-AGATTAGTATGAGAATTC-ATGTTTGT-CTTATTT
* * * ** * *
2703759 GA-AG-CATGAACTTAGATATTACAAAAAATGGTGGGAA--AAAAGCCTTTCTTGTGAAACAAAA
63 AAGAGACA--AACTTTGAT-TTAC-AAAAATGGT-GAAAGGAAAAGTTTTTCTTGCGAAACGAAA
* * * *
2703820 GCGTCAAAATGATGTATCCCAATGAGAAGAAAATG
123 GCATCAATATCATGTAT-CCAATGAGAAGACAATG
* * * * *
2703855 TTTATGGTGCCTAATCTGGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAAG
* * * ** * *
2703920 AGACAAACTTTGATTCCATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACCCCAAAGCATTA
66 AGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCATCA
* *
2703985 ATTTCATGTATCCTAATGA-AA-AGAATG
129 ATATCATGTATCC-AATGAGAAGACAATG
* * * * * * * * * * * *
2704012 TGTTTTGGCT-ACGATTTTC-ATATAG-ATGGAGATTATTACGAGAATTGATGCTTGTCTTATTT
1 T-TTATGG-TGCCTA-ATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTT
* * ** * * * * * *
2704074 ACGGGATGAATTTTGATTTAAAGGAAAATAGG-GTAAA-GAAAA-TGTCTCCATGC-AAAAGTAA
63 AAGAGACAAACTTTGATTTACA--AAAAT-GGTG-AAAGGAAAAGT-TTTTCTTGCGAAACG-AA
* * * * * *
2704135 ATCGTCAATATCATTTATCCTATAGAGGAGA-ATGTG
122 AGCATCAATATCATGTATCCAAT-GAGAAGACA-ATG
* * * * *
2704171 TTTATAGTGCCTAATCAC-AAAATGAAT-GAAGATCAATACT-AGAATCCATGTTTGCCTCTT-T
1 TTTATGGTGCCTAATC-CGAAAAAGAATAG-AGATTAGTA-TGAGAATTCATGTTTG--TCTTAT
* ** *
2704232 TGAAGCATGAACTTAAACTTT-A--TA-AAAAATGGTG---GGAAAAATGCCTTTCTTGCAAAAC
61 TTAAG-A-G-AC--AAACTTTGATTTACAAAAATGGTGAAAGG-AAAA-GTTTTTCTTGCGAAAC
* *
2704290 GAAAGCATCAATATGATGTATCCAACGAGAAGACAATG
119 GAAAGCATCAATATCATGTATCCAATGAGAAGACAATG
* * * * * * * *
2704328 TTCATGGTGCCTAGTCCGGAAAAGAATGGGGATTAGTATGA-TATTCATGTTTGTCTTAATTAAA
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAAG
* * *
2704392 AGACAAACTTTGATTCTAACAAAAACGGTGGAAGGAAAAGTTTTTCTTGC-AACACCAAAGCATC
66 AGACAAACTTTGATT-T-ACAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAA-ACGAAAGCATC
* *
2704456 AATTTCATGTA-CCTAAT--GAAGAGAATG
128 AATATCATGTATCC-AATGAGAAGACAATG
* * * * * * *
2704483 TGTTTTGGCTTCATAATCCGGAAAAGAACT-GAGA-TAGTTACGAGAA-TCGAT-TCATATCTTA
1 T-TTATGG-TGCCTAATCCGAAAAAGAA-TAGAGATTAG-TATGAGAATTC-ATGT-TTGTCTTA
* * * * * * ** * *
2704544 TTTAAG-GTACGAACATTGTTTTAAAGGAAAATAGG-CAAA-GAAAAGATTCCCATGC-AAAAGA
60 TTTAAGAG-ACAAACTTTGATTTACA--AAAAT-GGTGAAAGGAAAAGTTTTTCTTGCGAAACG-
* * * * * *
2704605 AAATCATCATTATCATTTATCCCAATAAGGAGA-ATGTG
120 AAAGCATCAATATCATGTAT-CCAATGAGAAGACA-ATG
* * ** * * * ** *
2704643 TTTGTAGTGCCTAATCATAAAATGAAT-GAAGATCATTGCGAGAATCCATGTTTGTCCCTT-TTG
1 TTTATGGTGCCTAATCCGAAAAAGAATAG-AGATTAGTATGAGAATTCATGTTTGT--CTTATT-
* * * * * **
2704706 T-AG-CACGAACTTAGACATTACAAAAAATGGTGGGAA--AAAAGCCTTTCTTGCGAAACGAAAG
62 TAAGAGACAAACTTTGA-TTTAC-AAAAATGGT-GAAAGGAAAAGTTTTTCTTGCGAAACGAAAG
*
2704767 CATCAATATGATGTATCCTAATGAGAAGACAATG
124 CATCAATATCATGTATCC-AATGAGAAGACAATG
* * * * * * * *
2704801 CTTATGGTGCCTAAT-CTAGAAAAGAATGGGGATTAGAATGAGTATTCATGTTTGTCTTTTTTAC
1 TTTATGGTGCCTAATCCGA-AAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * * *
2704865 GAGACAAACTTTGATTCTATCAAAAACGATGGAAGGAAAAGTTTTTCTTGC-AACACCAAAGCAT
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAA-ACGAAAGCAT
* **
2704929 CAATTTCATGTATCCTAAT--GAAGGGAATG
127 CAATATCATGTATCC-AATGAGAAGACAATG
* * * * * * *
2704958 TGTTTTGGGTTCATAATCATG-AATAGAACT-GAGA-TAGTTATGAG-AGTCGAT-TCTTATCTT
1 T-TTAT-GGTGCCTAATC-CGAAAAAGAA-TAGAGATTAG-TATGAGAATTC-ATGT-TTGTCTT
** * * * * * * * ** * *
2705018 ATTTAAG-GTATGAACATTGTTTTAAAGGAAAATAAG-CAAA-AAAAAGATTCCCATGC-AAAAG
59 ATTTAAGAG-ACAAACTTTGATTTACA--AAAAT-GGTGAAAGGAAAAGTTTTTCTTGCGAAACG
* * * *
2705079 AAAATCATCATTATCATTTATCCCAATGAGGAA-A-ATGTG
120 -AAAGCATCAATATCATGTAT-CCAATGA-GAAGACA-ATG
* * * ** * * *
2705118 TTTATAGTGCCTAAACAC-AAAATGAAT-GAAGACCATTACGAGAA-TCTATGTTTATCCCTT-T
1 TTTATGGTGCCTAATC-CGAAAAAGAATAG-AGATTAGTATGAGAATTC-ATGTTTGT--CTTAT
* * * * * * * *
2705179 TGAAG-CACGAACTTAGACATTACAAAAAATGGTGGGAA--AAAAG-CTTTCTTGCGAAATGAAA
61 TTAAGAGACAAACTTTGA-TTTAC-AAAAATGGT-GAAAGGAAAAGTTTTTCTTGCGAAACGAAA
* *
2705240 GCATCAATATGATGTATCCTAATGAGAAGACAACG
123 GCATCAATATCATGTATCC-AATGAGAAGACAATG
* * * * * * **
2705275 TTTATGGTACCTAATCAGGAAAATAATGGGGATTAGTATGACTATTCATGTTTGTCTTATTTAAG
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAAG
* * * * **
2705340 AGATAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGTGACCCTG-AAGCATC
66 AGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAAC-GAAAGCATC
* **
2705404 AAT-TGCACGTATCCTAAT-A-AAGGGAATG
128 AATAT-CATGTATCC-AATGAGAAGACAATG
* * * * * * * * * *
2705432 TCTTTTAGCTTCATAATCATG-AAAAGAACTA-AGA-CAGTTATGGGAATTAAT-TCTTATCATA
1 T-TTAT-GGTGCCTAATC-CGAAAAAGAA-TAGAGATTAG-TATGAGAATTCATGT-TTGTCTTA
* * * * * * ** * * *
2705493 TTTAAG-GTACGAACATTGTTTTAAAGGAAAATAG-GAAAAGAAAA-TATTCCCATGCAAAAAGA
60 TTTAAGAG-ACAAACTTTGATTTACA--AAAATGGTGAAAGGAAAAGT-TTTTCTTGCGAAACG-
* * * * * * * *
2705555 AAATCAACATTGTTATTTATCCTCATGAGGAGA-ATATG
120 AAAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * * *
2705593 TTTGTAGTGCCTAATCAC-AAAATGAAT-GAAGATCATTACT-AGAATCCATGTTTGTCTCT-TT
1 TTTATGGTGCCTAATC-CGAAAAAGAATAG-AGATTAGTA-TGAGAATTCATGTTTGTCT-TATT
* * * * * ** *
2705654 TGAAG-CACGAACTTAGACTTTAAAAAAAATGGTGGGAA--AAAAGCCTTTCTTGTGAAACGAAA
62 T-AAGAGACAAACTTTGA-TTT-ACAAAAATGGT-GAAAGGAAAAGTTTTTCTTGCGAAACGAAA
* * * *
2705716 GCATCAAGATGATGTATCCTAAAGAGAAGACTATG
123 GCATCAATATCATGTATCC-AATGAGAAGACAATG
* * * * *
2705751 TTTAAGTTGCCTTATCCTG-AAAAGAATGGGGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCC-GAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * * * * * * *
2705815 CAGACAAACTTTGATTTTATCAAAAAAGGTGGAAGAAAAAGTTTTTGTTTCGACACTAAAGCATC
65 GAGACAAACTTTGA-TTTA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCATC
* *
2705880 AATTTCATGTATCCTAATGAAGGAA-AC-GTG
128 AATATCATGTATCC-AATG-A-GAAGACAATG
* * * * * *
2705910 TTT-TGGCT-CCGATTCTC-ATAAAGAAT-GAAGATT-GTTACGAGAATTGATGCTTGTCTTATT
1 TTTATGG-TGCCTAATC-CGAAAAAGAATAG-AGATTAG-TATGAGAATTCATGTTTGTCTTATT
* * * * * * *
2705970 TAAGGGATAAAGTTTGATTTAAAGGAAAATAGG-GCAAA-GAAAAGATTTCCATGCAGAATA--A
62 TAAGAGACAAACTTTGATTTACA--AAAAT-GGTG-AAAGGAAAAGTTTTTCTTGC-GAA-ACGA
* * * * * * * *
2706031 AATCGTCAATATCATTTACCCTATTAAGGAGA-ATGTG
121 AAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * *
2706068 TTTATAGTGCCTAATCAC-AAAATGAATCA-AGATCAATACT-AGAATCCATGTTTGTCTCT-TT
1 TTTATGGTGCCTAATC-CGAAAAAGAAT-AGAGATTAGTA-TGAGAATTCATGTTTGTCT-TATT
** * * * * *
2706129 TGAAG-CCCGAACTTAGACTTCATA-AAAAATGGTGGAAA--AAATGCCTTTT-TTGCGAAACAA
62 T-AAGAGACAAACTTTGA-TT--TACAAAAATGGT-GAAAGGAAAAG-TTTTTCTTGCGAAACGA
*
2706189 AAGCATCAATATGATGTATCC-ATCGAGAAGACAATG
121 AAGCATCAATATCATGTATCCAAT-GAGAAGACAATG
* * * * * *
2706225 TTTATGGTGCCTAATCCGGAAAAGAATGGGGATTAGTGA-GAGTATTAATCTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGT-ATGAGAATTCATGTTTGTCTTATTTAA
* * * ** *
2706289 GAGATAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACCCTAAAGCATC
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCATC
* **
2706354 AATTTCATGTATCCCAAT--GAAGGGAATG
128 AATATCATGTAT-CCAATGAGAAGACAATG
* ** * * * * * *
2706382 TGTTTTGGCT-CAGATTTTCG-TAAAGAATAGAGATT-GTTACGAGAATTGAT-CTTGTCTTATT
1 T-TTATGG-TGCCTA-ATCCGAAAAAGAATAGAGATTAG-TATGAGAATTCATGTTTGTCTTATT
* ** * * * * * **
2706443 TAAGTGATGAACTTTGATTTAAAGGAAAATAGG-GCAAA-GAAAAGGTTTCCATGCAAAAAAAAA
62 TAAGAGACAAACTTTGATTTACA--AAAAT-GGTG-AAAGGAAAAGTTTTTCTTGCGAAACGAAA
* * * *
2706506 TCATCAATATCATTTATCCTAATGAGGAGA-ATGTG
123 GCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * *
2706541 TTTATAGTGCCTAA--CGACAAAATGAAT-GAAGATCAATACT-AGAATCCATGTCTGTCTCT-T
1 TTTATGGTGCCTAATCCGA-AAAA-GAATAG-AGATTAGTA-TGAGAATTCATGTTTGTCT-TAT
* * * * **
2706601 TTGAAG-CACGAACTTAGACTTACAAAAAATGGTG---GGAAAAATGCCTTTCTTGCGAAACGAA
61 TT-AAGAGACAAACTTTGATTTAC-AAAAATGGTGAAAGG-AAAA-GTTTTTCTTGCGAAACGAA
**
2706662 AGCATCAATATGTTGTATCCAATGAGAAGACAATG
122 AGCATCAATATCATGTATCCAATGAGAAGACAATG
* * * *
2706697 TTTGTGGTGCCTAATCCGAAAAAGAAT-GGGATTAGTATGAGTATTCATGTTTATCTTATTTAAG
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAAG
* **
2706761 AGACAAACTTTGATTCTATCAAAAATGGTGAAAGGAAAAGTTTTTCTTGTGACCCGAAAGCATCA
66 AGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCATCA
*
2706826 ATTTCATGTATCCTAATGATG--GA-AATG
129 ATATCATGTATCC-AATGA-GAAGACAATG
* * * * * * *
2706853 TGTT-TTG-GCTCTGATTTTCTC-ATAAAGAATGGAGATTATTACGAGAA-TCGATGCTTGTCTT
1 T-TTATGGTGC-CT-A--ATC-CGAAAAAGAATAGAGATTAGTATGAGAATTC-ATGTTTGTCTT
* * ** * * * *
2706914 ATTTACGGGATGAACTTTGATTTAAAGGAAAATAGG-GCAAA-GAAAAGATTTTCATGC-AAAAG
59 ATTTAAGAGACAAACTTTGATTTACA--AAAAT-GGTG-AAAGGAAAAGTTTTTCTTGCGAAACG
* * * * *
2706976 AAAATCATCAATATCATTTGTCCTAA-G-GAGGAGAATG
120 -AAAGCATCAATATCATGTATCC-AATGAGAAGACAATG
* * ** * * * * *
2707013 TGTTCATAGTGCCTAAT-C-ACAAATGAAT-GAAGACAATTACGAGAATCCATGTTTGTTTTTTT
1 T-TT-ATGGTGCCTAATCCGA-AAAAGAATAG-AGATTAGTATGAGAATTCATGTTTGTCTTATT
* * * * **
2707075 TGAAG-CACGAACTTAGACTTTGCAAAAAATGGTGAGAA--AAAAGACTTTCTTGCGAAACGAAA
62 T-AAGAGACAAACTTTGA-TTTAC-AAAAATGGTGA-AAGGAAAAGTTTTTCTTGCGAAACGAAA
* * * *
2707137 GCAACAATATGATGTATCCTAATGAGTAGACTATG
123 GCATCAATATCATGTATCC-AATGAGAAGACAATG
* * * ** * * * *
2707172 TTTGTGTTGCCTTATCCTCAAAAGAATGGGGATTAGTATGA-ATATT--TATATGTCTTATTTAA
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGA-ATTCATGTTTGTCTTATTTAA
* *
2707234 GAGACAAACTTTGATTCTATCAAAAACT-GTGGAAGGAAAAGTTTTTCTTGC-AACACCAAAGCA
65 GAGACAAACTTTGATT-TA-CAAAAA-TGGTGAAAGGAAAAGTTTTTCTTGCGAA-ACGAAAGCA
* **
2707297 TCAATTTCATGTATCCTAAT--GAAGGGAATG
126 TCAATATCATGTATCC-AATGAGAAGACAATG
* * * * ** * * *
2707327 TGTTTTGGCTTCATAATCATG-AATGGAACTA-AGA-TAGT-TACAGGAA-TCGAT-TCTTATGT
1 T-TTATGG-TGCCTAATC-CGAAAAAGAA-TAGAGATTAGTAT-GA-GAATTC-ATGT-TTGTCT
* ** * * * * * * ** * *
2707386 TATTTATG-GTATGAACATTGTTTTAAAGAAAATAGG-CAAA-TAAAAGATTCCCATGC-AAAAG
58 TATTTAAGAG-ACAAACTTTGATTTACA-AAAAT-GGTGAAAGGAAAAGTTTTTCTTGCGAAACG
* * * * *
2707447 AAAATCATCATTATCATCTATCCCAATGAGGAGA-ATGTG
120 -AAAGCATCAATATCATGTAT-CCAATGAGAAGACA-ATG
* * * * *
2707486 TTTATAGTGCCTAATGCC-ACAATGAAT-GAAGATCAATATGAGAA-TCTATGTTTGTCCCTT-T
1 TTTATGGTGCCTAAT-CCGAAAAAGAATAG-AGATTAGTATGAGAATTC-ATGTTTGT--CTTAT
* * * * * ** * *
2707547 TGAAG-CACGAACTTAGATATTACAGAAAATGGTGGGAA--AAAAGAGTTTCTTGTGAAACAAAA
61 TTAAGAGACAAACTTTGAT-TTACA-AAAATGGT-GAAAGGAAAAGTTTTTCTTGCGAAACGAAA
* * * *
2707609 GCGTCAATATGATGTATCCCAATTAGAAGAAAATG
123 GCATCAATATCATGTAT-CCAATGAGAAGACAATG
* * * *
2707644 TATATGGTGCCTAATCCGGAAAAGAAT-GAGGATTAGTATGAGTATTCATGATTGTCTTATTTAA
1 TTTATGGTGCCTAATCCGAAAAAGAATAGA-GATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * * * ** *
2707708 GAGATAAACTTTAATTCTATCAAAAATGGTGGAAGAAAAAGTTTTTCTTGCGACTCCAAAGCATC
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCATC
**
2707773 AAT-TGCATGTATCCTAAT--GAAGGGAATG
128 AATAT-CATGTATCC-AATGAGAAGACAATG
* * * * * * *
2707801 TGTTTTGGCTTCATAAT-CAAGAAAAGAACT-GAGA-CAGTTATGAGAATTGAT-TCTTATCTTA
1 T-TTATGG-TGCCTAATCCGA-AAAAGAA-TAGAGATTAG-TATGAGAATTCATGT-TTGTCTTA
** * * * ** * ** * *
2707862 TTTAAG-GTATGAACATTG-TCT-CAAAGGAAATTAGCCAAA-GAAAAGATCCTCATGC-AAAAG
60 TTTAAGAG-ACAAACTTTGATTTAC-AA--AAA-TGGTGAAAGGAAAAGTTTTTCTTGCGAAACG
* * * *
2707922 AAAATCATCATTATCATTTATCCTAATGAGGAGA-ATATG
120 -AAAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * * *
2707961 TTTATAGTGCCTAATCAC-AAAATGAAT-GAAGATCATTACGAGAATCCATGTTTGTCTCT-TTT
1 TTTATGGTGCCTAATC-CGAAAAAGAATAG-AGATTAGTATGAGAATTCATGTTTGTCT-TATTT
* * * * * * * * *
2708023 GAAG-CACGAACTTAGACTTTACAAAAAATAGTGGGAA--AAAAGTCTTTCTTGTGAAACAAAAA
63 -AAGAGACAAACTTTGA-TTTAC-AAAAATGGT-GAAAGGAAAAGTTTTTCTTGCGAAACGAAAG
** * *
2708085 TGTCAATATGA-GTATCCTAATTAGAAGACAATG
124 CATCAATATCATGTATCC-AATGAGAAGACAATG
* * * * * *
2708118 TTTATGGTGCCTAATCTGGAAAAGAATAGGGATTAATATGA-ATATTCTTGTTTGTCTTATTTAT
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGA-ATTCATGTTTGTCTTATTTAA
* * ** *
2708182 GAGGCAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGCGACCCCAAAGCATC
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCATC
* * * **
2708247 AATTTCATGTATCC-TTCAG--G-GTATG
128 AATATCATGTATCCAATGAGAAGACAATG
* * * * ** * *
2708272 TGTT-TTG-GCTCTGATTCTCGTAAAA-AATGGAGATT-GTTACAAGAA-TCAATGTTTATTTTA
1 T-TTATGGTGC-CT-AATC-CGAAAAAGAATAGAGATTAG-TATGAGAATTC-ATGTTTGTCTTA
* ** * * * * *
2708332 TTTAAGGGATGAACTTTGATTTAAAGGAAAATAGG-GCAAA-GAAAAGATTTCCAT-C-AAAAGA
60 TTTAAGAGACAAACTTTGATTTACA--AAAAT-GGTG-AAAGGAAAAGTTTTTCTTGCGAAACG-
* * * *
2708393 AAATCATCAATACCATTTATCCTAATGA-AGAGA-ATGTG
120 AAAGCATCAATATCATGTATCC-AATGAGA-AGACA-ATG
* * * * * * *
2708431 TTTATAGTGCCTAAT--GACAAATTGAAT-GAAGATGAAT-TCTAGAATTCATGTTTATCTTTTT
1 TTTATGGTGCCTAATCCGA-AAA-AGAATAG-AGATTAGTAT-GAGAATTCATGTTTGTCTTATT
* ** * * * * * *
2708492 TGAAG-TACGTACTTAGACTTTAAAAAAATGG-G--GGGAAAAATGCTTTCTTGTGAAACGAAAG
62 T-AAGAGACAAACTTTGA-TTTACAAAAATGGTGAAAGGAAAAGT-TTTTCTTGCGAAACGAAAG
* * * *
2708553 CATCAATATGATGCATCCTAAAGAGAAGACTATG
124 CATCAATATCATGTATCC-AATGAGAAGACAATG
* ** * * * *
2708587 TTTATAGTGCCTTTTCTGAAAAAGAAT-GCGGATTAGTGTGAGTATTCATGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCGAAAAAGAATAG-AGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * *
2708651 TAGACAAACTTCGATTCTATCAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGATAA-TAAAGCAT
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGA-AACGAAAGCAT
* *
2708715 CAATTTCATGTATCCTAATGA-AGGGA-ATATG
127 CAATATCATGTATCC-AATGAGA-AGACA-ATG
* * * * * *
2708746 TTT-TGGCT-CCGATTCTC-ATAAAGAATGGAGATT-GTTATGA-TATTCGATGTTTCTCTTATT
1 TTTATGG-TGCCTAATC-CGAAAAAGAATAGAGATTAG-TATGAGAATTC-ATGTTTGTCTTATT
* ** * * * * * * *
2708806 TAAGGGATGAACTTTGATTTAAAGGAAAATAGAG-CAGAGAAAA-TATTTCCATGC-AAAAGAAA
62 TAAGAGACAAACTTTGATTTACA--AAAATGGTGAAAG-GAAAAGT-TTTTCTTGCGAAACG-AA
* * * * *
2708868 ATCATCAATGTCATCTATCCTAATGAGGAGA-ATGTG
122 AGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* ** * * * * *
2708904 TTTATAGTGCCTAATCAC-AAAATTAAT-GAAGATCATTATTAGAATCCTTGTTTGTCTCT-TTT
1 TTTATGGTGCCTAATC-CGAAAAAGAATAG-AGATTAGTATGAGAATTCATGTTTGTCT-TATTT
* * ** * * *
2708966 GA-AG-CATGAACTTTGACTTTACAGAAAATGGTGGGAA--AAAAGCCTTACTTGTGAAGCGAAA
63 AAGAGACA--AACTTTGA-TTTACA-AAAATGGT-GAAAGGAAAAGTTTTTCTTGCGAAACGAAA
* * ***
2709027 GCGTTAATCGGATGTATCCTAATGAGAAGACAATG
123 GCATCAATATCATGTATCC-AATGAGAAGACAATG
* * * * *
2709062 TTTATGGTGCCTAATTCGGAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAAG
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAAG
** * * *
2709127 AGACAAACTTTGATTCTATCAAAAACAGTGGAAA-AAAAAGTTTTTCTTGC-AACCCTAAAGCAT
66 AGACAAACTTTGATT-TA-CAAAAATGGT-GAAAGGAAAAGTTTTTCTTGCGAA-ACGAAAGCAT
* * **
2709190 CAATTTCAAGTATCCTAAT--GAAGGGAATG
127 CAATATCATGTATCC-AATGAGAAGACAATG
* * ** * * * *
2709219 TGGTT-T-G-GCTCTGATTTTC-ATGAAGAATGGAGATT-GTTACGAGAA-TCGATGCTTGTTTT
1 T--TTATGGTGC-CT-A-ATCCGAAAAAGAATAGAGATTAG-TATGAGAATTC-ATGTTTGTCTT
** * * * * * * *
2709278 ATTTAAGAGATGAACATTGATTTAAAGGAAAATAGG-GCAAAGG-AAAGATTTCCATG-TAAAAG
59 ATTTAAGAGACAAACTTTGATTTACA--AAAAT-GGTG-AAAGGAAAAGTTTTTCTTGCGAAACG
* * * * *
2709340 AGAATCATCAATATCATTTATCGTAATGAGGAGA-ATGTG
120 A-AAGCATCAATATCATGTATC-CAATGAGAAGACA-ATG
* * * * *
2709379 TTTATAGTGCCTAAT--GACAAAATGAAT-GAAGCA-CAATACT-AGAATCCAAGTTTGTCTCT-
1 TTTATGGTGCCTAATCCGA-AAAA-GAATAG-AG-ATTAGTA-TGAGAATTCATGTTTGTCT-TA
* * ** * * ** *
2709438 TTTGAAG-CACGAACCTAGGCTTTATAAAAAATGGTG---GGAAAAATGCCTTTCTTGCGAAATG
60 TTT-AAGAGAC-AAACTTTGATTTA-CAAAAATGGTGAAAGG-AAAA-GTTTTTCTTGCGAAACG
* * * *
2709499 AAAGCATCAATATGATGTACCCAATGATAAGATAATG
120 AAAGCATCAATATCATGTATCCAATGAGAAGACAATG
** * * ** * *
2709536 TTTATGGTGCCTAAT-TTAGAAAAGAATGGGGATTAGTACAAGTATTCATGTTTGTGTTATTTAA
1 TTTATGGTGCCTAATCCGA-AAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * * **
2709600 GAGACAAACTTTGATTCTATAAGAAACGGTAAAAAAAAAAGTTTTTCTTGC-AACCAC-AAAGCA
65 GAGACAAACTTTGATT-TACAA-AAATGGTGAAAGGAAAAGTTTTTCTTGCGAA--ACGAAAGCA
* **
2709663 TCAATTTCATGTATCCTAAT--GAAGGGAATG
126 TCAATATCATGTATCC-AATGAGAAGACAATG
* * * * *
2709693 TGTTTTGGCTTCAC-AATCTTG-AAAAGAACT-GAGA-CAGTTACGAGAA-TCGAT-TCTTGTCT
1 T-TTATGG-TGC-CTAATC-CGAAAAAGAA-TAGAGATTAG-TATGAGAATTC-ATGT-TTGTCT
* * ** * * * ** * * ** * *
2709752 TTTTTACG-GTATGAACTTTGTTTTAAAGGAAAATAGACAATGG-AAAGATTCCCATG-TAGAA-
58 TATTTAAGAG-ACAAACTTTGATTTACA--AAAATGGTGAAAGGAAAAGTTTTTCTTGCGA-AAC
* * * *
2709813 GAAAATCATGAATATCATTTATCCTAATGAGGAGA-ATATG
119 G-AAAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * * * * * *
2709853 TTTATAGTACCTAAT-CAAAAAATGAAT-GAAGATCATTACT-AGAATCCAAGTTTGTCTCA-TG
1 TTTATGGTGCCTAATCCGAAAAA-GAATAG-AGATTAGTA-TGAGAATTCATGTTTGTCTTATTT
* * ** *
2709914 AAGCA-A-GAACTTAGACTTTACAAAAAATGGTGGAAA--AAAAGCCTTTCTTGCGAAACGGAAG
63 AAG-AGACAAACTTTGA-TTTAC-AAAAATGGT-GAAAGGAAAAGTTTTTCTTGCGAAACGAAAG
* * * * * *
2709975 CATTAATATGATGTATCATAATAAAAAGACAACG
124 CATCAATATCATGTATC-CAATGAGAAGACAATG
* * * * * * ** *
2710009 TTTATGGTGCCTAATAC-AGAAAAGATTGGGGACTAGTGTTGAGTTTTCATGTTTGTCTTATTGA
1 TTTATGGTGCCTAATCCGA-AAAAGAATAGAGATTAGT-ATGAGAATTCATGTTTGTCTTATTTA
* * * ** * *
2710073 AGAGACAAACTCTGTTTCTATAAAAAATTATGGAAA-GAAAAGTTTTTCTTGCGGCATC-AAAGC
64 AGAGACAAACTTTGATT-TA-CAAAAATGGT-GAAAGGAAAAGTTTTTCTTGC-GAAACGAAAGC
* * * * ** *
2710136 ATTAGTGTCATGTATCCTAATGA-AGGGTATTTG
125 ATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * * *
2710169 TTT-TGGCTTCAC-AATCTTG-AAAAGAACTGAGACACTTA-CA--AGAA-TCGAT-TCTTATCA
1 TTTATGG-TGC-CTAATC-CGAAAAAGAA-T-AGAGA-TTAGTATGAGAATTC-ATGT-TTGTCT
** * * * * * ** * *
2710226 TATTTAAG-GTATGAACATTGTTTTAAAGGAAAATAGG-CAAA-GAAAAGATTCGCATAC-AATA
58 TATTTAAGAG-ACAAACTTTGATTTACA--AAAAT-GGTGAAAGGAAAAGTTTTTCTTGCGAA-A
* * ** * ** *
2710287 -GAAAATCGTCAGCATCATTTATCCTAATGAGGTGA-ATGTG
118 CG-AAAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * *
2710327 TTTATAGTGCCGAA--CGACAAAATGAAT-GAAGATCATTACT-AGAA-TCTAGGTTTGTCTCT-
1 TTTATGGTGCCTAATCCGA-AAAA-GAATAG-AGATTAGTA-TGAGAATTC-ATGTTTGTCT-TA
* * * **
2710386 TTTGAAG-CACGAACTTAGACTTTACAAAAAATGGTG---GGAAAAATGCCTTTCTTGC-AGAAC
60 TTT-AAGAGACAAACTTTGA-TTTAC-AAAAATGGTGAAAGG-AAAA-GTTTTTCTTGCGA-AAC
* * *
2710446 GAATGCATCAATATGATGTATCCAATGAGAAGACAGTG
119 GAAAGCATCAATATCATGTATCCAATGAGAAGACAATG
* * * * * *
2710484 TTTGTGGTGCCTAATTCC-AAAAAGAATGGGGATTAGTATGTGTATTCAAGTTTGTCTTATTTAA
1 TTTATGGTGCCTAA-TCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * * ** * *
2710548 GAGATAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGTGACCCTATAGCATC
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCATC
* *
2710613 AATTTCATGTATCCTAATGA-AGAGA-ATCTG
128 AATATCATGTATCC-AATGAGA-AGACA-ATG
* * * * * ** * *
2710643 CTT-TGGCT-CTTATTCTTG-TAAAGAATAGAGATTTTTATGAGAA-TCAGTGCTTGTCTTATTG
1 TTTATGG-TGCCTAATC-CGAAAAAGAATAGAGATTAGTATGAGAATTCA-TGTTTGTCTTATTT
* ** * * * * *
2710704 AAGGGATGAACTTTGATTTAAAGGAAAATAGG-GCAAA-GAAAAGATTTCCATGC-AAAAGAAAA
63 AAGAGACAAACTTTGATTTACA--AAAAT-GGTG-AAAGGAAAAGTTTTTCTTGCGAAACG-AAA
* * *
2710766 TCATCAATATCAAT-TATCCTAATGAGGAGA-ATTTG
123 GCATCAATATC-ATGTATCC-AATGAGAAGACA-ATG
* * * ** * * *
2710801 TTTGTGGTGCCTAA-CAAC-AAAATGAAT-GAAGATCAAAACTG-GAATCCATGCTATCTCTT-T
1 TTTATGGTGCCTAATC--CGAAAAAGAATAG-AGATTAGTA-TGAGAATTCATG-TTTGTCTTAT
* * ** * * ** * *
2710861 TGAAG-CATGAACTTAGACTTTACAAAAAATGGTGGGAA--AAAAGCATTTCTTGCAAAATGAAA
61 TTAAGAGACAAACTTTGA-TTTAC-AAAAATGGT-GAAAGGAAAAGTTTTTCTTGCGAAACGAAA
* * * *
2710923 GCGTCAATATGATGTATCCTAATGATAAGAAAATG
123 GCATCAATATCATGTATCC-AATGAGAAGACAATG
* * * * *
2710958 TTTATGGTGCTTAATCC-AGAAAAGAATGGGGATTAGTATGAGTATTCATTTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCGA-AAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
** * *** ** *
2711022 GAGACAAACTTTGATTTTATCAAAAACAGTGGAAGGAAAAGTTTTTCTTATTACCCCAAAGCATC
65 GAGACAAACTTTGA-TTTA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCATC
* * *
2711087 AATTTCATGTATCCTAAT--TAAGAGAATG
128 AATATCATGTATCC-AATGAGAAGACAATG
** * * * * *
2711115 TGTT-TCAT-CTCTGATTCTC-ATAAAGAATGGAGATT-GTTACGAGAA-TCGATGCTTGTCTTA
1 T-TTATGGTGC-CT-AATC-CGAAAAAGAATAGAGATTAG-TATGAGAATTC-ATGTTTGTCTTA
* * ** * * * * *
2711175 CTTAAGGGATGAATTTTGATTTAAAGGAAAATAGG-GCAAA-GAAAAGATTTTCATGC-AAAAGA
60 TTTAAGAGACAAACTTTGATTTACA--AAAAT-GGTG-AAAGGAAAAGTTTTTCTTGCGAAACG-
* * * *
2711237 AAATCATCAATATCATTTATCCTAATGAGAATA-ATGTG
120 AAAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * *
2711275 TTTATAGTGCCTAAT--------G---ACA-A--A--AT--GAATCCATGTTTGTCTTTTCTAAA
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTAT-TTAA
* * * * * ** ** * **
2711322 G-CACGAGCTTAGACTTTACAAAAAAT-GTGAGAA--AAATGCCTTTCTTGTAAAAAGAAAGTGT
65 GAGACAAACTTTGA-TTTAC-AAAAATGGTGA-AAGGAAAAGTTTTTCTTGCGAAACGAAAGCAT
**
2711383 CAA-ATGGTGTATCCTAATGAGAAGACAATG
127 CAATATCATGTATCC-AATGAGAAGACAATG
* * * * * *
2711413 TTTATGGTGCCTAGTCCGAAAAAAGAATGGGGATTAGTGTGAGTATTCTTGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCG-AAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * * * ** *
2711478 AAGGCAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAGGTTTTTCCTT-CGACCCTAAAGCAT
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTT-CTTGCGAAACGAAAGCAT
* * * *
2711542 CAATTTTATGCATCCTAATGA-AGGA-AATG
127 CAATATCATGTATCC-AATGAGAAGACAATG
* * * * * * * * *
2711571 TGTTTTGGCT-CCGATTCTCG-TAAACAATGGAGATT-GTTACGAGAA-TCGATGCTTATCTTAT
1 T-TTATGG-TGCCTAATC-CGAAAAAGAATAGAGATTAG-TATGAGAATTC-ATGTTTGTCTTAT
* ** * * * * *
2711632 TTAAGGGATGAACTTTGATTTAAAAGAAAACAGG-GCAAA-GAAAAG-ATTTCATGC-AAAAGAA
61 TTAAGAGACAAACTTTGATTT-ACA-AAAA-TGGTG-AAAGGAAAAGTTTTTCTTGCGAAACG-A
* * * * *
2711693 AATCATCAATATCATTTATCCTAAAGAGAATA-ATGTG
121 AAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * * * *
2711730 TTTATAGTGGCTAAT--GACAAAATGAAT-GAAAATCAATACT-AGAGTCCATGTTTGTCTCT-T
1 TTTATGGTGCCTAATCCGA-AAAA-GAATAG-AGATTAGTA-TGAGAATTCATGTTTGTCT-TAT
* * * ** * *
2711790 TTGA-AG-CATGAACTTAGACTTTACAAAAAAAGGTG---GGAAAATGCCTTTCTTGCAAAATGA
61 TTAAGAGACA--AACTTTGA-TTTAC-AAAAATGGTGAAAGGAAAA-GTTTTTCTTGCGAAACGA
* ** *
2711850 AAGCGTCAATAAAATGTATCCAACGAGAAGACAATG
121 AAGCATCAATATCATGTATCCAATGAGAAGACAATG
* * * * * * *
2711886 TTTGTGGAGCCTAAT-CTAGAAGAGAAT-GGGATTAGTACGAGTATTCATGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCGA-AAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * ** *
2711949 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAGGTTTTTCCTT-CGACCCTAAAGCAT
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTT-CTTGCGAAACGAAAGCAT
* * * *
2712013 CAATTTTATGCATCCTAATGA-AGGA-AATG
127 CAATATCATGTATCC-AATGAGAAGACAATG
* * * * * * * * *
2712042 TGTTTTGGCT-CCGATTCTCG-TAAACAATGGAGATT-GTTACGAGAA-TCGATGCTTATCTTAT
1 T-TTATGG-TGCCTAATC-CGAAAAAGAATAGAGATTAG-TATGAGAATTC-ATGTTTGTCTTAT
* ** * * * * *
2712103 TTAAGGGATGAACTTTGATTTAAAAGAAAACAGG-GCAAA-GAAAAG-ATTTCATGC-AAAAGAA
61 TTAAGAGACAAACTTTGATTT-ACA-AAAA-TGGTG-AAAGGAAAAGTTTTTCTTGCGAAACG-A
* * * * *
2712164 AATCATCAATATCATTTATCCTAAAGAGAATA-ATGTG
121 AAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * * * *
2712201 TTTATAGTGGCTAAT--GACAAAATGAAT-GAAAATCAATACT-AGAGTCCATGTTTGTCTCT-T
1 TTTATGGTGCCTAATCCGA-AAAA-GAATAG-AGATTAGTA-TGAGAATTCATGTTTGTCT-TAT
* * ** ** * *
2712261 TTGA-AG-CATGAACTTAGACTTTACAAAAAAAAGTG---GGAAAATGCCTTTCTTGCAAAATGA
61 TTAAGAGACA--AACTTTGA-TTTAC-AAAAATGGTGAAAGGAAAA-GTTTTTCTTGCGAAACGA
* ** *
2712321 AAGCGTCAATAAAATGTATCCAACGAGAAGACAATG
121 AAGCATCAATATCATGTATCCAATGAGAAGACAATG
* * * * * * *
2712357 TTTGTGGAGCCTAAT-CTAGAAGAGAAT-GGGATTAGTACGAGTATTCATGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCGA-AAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * * *
2712420 GAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGC-AACCCCAAAGCAT
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAA-ACGAAAGCAT
* **
2712484 CAATTTCATGTATCCTAAT--GAAGGGAATG
127 CAATATCATGTATCC-AATGAGAAGACAATG
* * * * * *
2712513 TGCTT-T-G-GCTCTGATTCTCG-TAAAGAATGGAGATTATTAGGAGAA-TCAATGCTTGTCTTA
1 T--TTATGGTGC-CT-AATC-CGAAAAAGAATAGAGATTAGTATGAGAATTC-ATGTTTGTCTTA
* ** * * * ** *
2712573 TTTAAGGGATGAACTTTGATTTAAAGGAAAATTGG-GCAAA-GAAAAGATTTCCAAGC-AAAAGA
60 TTTAAGAGACAAACTTTGATTTACA--AAAA-TGGTG-AAAGGAAAAGTTTTTCTTGCGAAACG-
* * * * *
2712635 AAATCATCAATATCATTTATCCTGATGAGGAGA-ATTTG
120 AAAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * * *
2712673 TTTATAGTGCCTAAT--GACAAAATGAA-CGAAGATCAATACT-AGAATCCATGTTTGTCTCCA-
1 TTTATGGTGCCTAATCCGA-AAAA-GAATAG-AGATTAGTA-TGAGAATTCATGTTTGTCT-TAT
* * ** * *
2712733 TTAA-AGCACAAACTTAGACTTTACAAAAAATGGTGGGAA--AAAAGCCTTTCTTGTGAAATGAA
61 TTAAGAG-ACAAACTTTGA-TTTAC-AAAAATGGT-GAAAGGAAAAGTTTTTCTTGCGAAACGAA
* * * *
2712795 AGCGTCAATATGATGTATCCTAAAGAGAAGACTATG
122 AGCATCAATATCATGTATCC-AATGAGAAGACAATG
* * * * ** * * * *
2712831 TTTATAGTGCCTTATCCTG-AAAAGAATTGGGATTAGTGCGAGTATTCATGTTTGCCTTTTTTGA
1 TTTATGGTGCCTAATCC-GAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * ** *
2712895 GAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAAGTTTTTCTTGCGACCCCAAAGCATC
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCATC
* **
2712960 AATTTCATGTATCCTAAT--GAAGGGAATG
128 AATATCATGTATCC-AATGAGAAGACAATG
* * * * *
2712988 TGCTT-T-G-GCTCTGATTCTC-ATAAAA-AATGGAGATTATTAGGAGAA-TCGATGCTTGTCTT
1 T--TTATGGTGC-CT-AATC-CGA-AAAAGAATAGAGATTAGTATGAGAATTC-ATGTTTGTCTT
* ** * * * * * * ** *
2713047 ATTTAAGGGATGAATTTTGTTTTAAATGAAAATAGG-CAAA-GAAAAGATTTCCAGGC-AAATGA
59 ATTTAAGAGACAAACTTTGATTTACA--AAAAT-GGTGAAAGGAAAAGTTTTTCTTGCGAAACG-
* * * * *
2713109 AAATCATCAATATCATTTATCCTAATGTGGAGA-ATTTG
120 AAAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * * * *
2713147 TTTGTAGTTCCTAAT--GACAAAATGAAT-GAAGATCAATACT-AGAATCCATGTTTGTCTCCAT
1 TTTATGGTGCCTAATCCGA-AAAA-GAATAG-AGATTAGTA-TGAGAATTCATGTTTGTCT-TAT
* * * * * * *
2713208 TGAAG-CACAAACTTAGACTTTACAAAAAATGGTGGGAA--AAAAGCCTTTT-TTGCAAAATGAA
61 TTAAGAGACAAACTTTGA-TTTAC-AAAAATGGT-GAAAGGAAAAG-TTTTTCTTGCGAAACGAA
* * * *
2713269 AGCGTCAATATGATGTATCCTAAAGAGAAGACTATG
122 AGCATCAATATCATGTATCC-AATGAGAAGACAATG
* * * * * *
2713305 TTTATAGTGCCTTATCCTG-AAAAGAATAGGGATTAGTGTGAGTATTCATGTTTGTCTTATTTGA
1 TTTATGGTGCCTAATCC-GAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * ** *
2713369 GAGACAAACTTTGATTCTATCAATAAA-GGTGGAAA-TAAAAGTTTTTCTTGTGACCCCAAAGCA
65 GAGACAAACTTTGATT-TA-CAA-AAATGGT-GAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCA
* * * *
2713432 TTAATTTCATGTATCCTAATTATG--G-GAATG
126 TCAATATCATGTATCC-AATGA-GAAGACAATG
** * * * * * * * *
2713462 TGCAT--TAGCTTTGATTCTCG-TAAAGAATGGAGATT-GTTACGAG-AGTCGACGCTTGTCTTA
1 TTTATGGT-GC-CT-AATC-CGAAAAAGAATAGAGATTAG-TATGAGAATTC-ATGTTTGTCTTA
** * * * *
2713522 TTTAAGAGATGAACTTTGATTTAAAGGAAAATAGG-GCAAA-GAAAAGATTTTCATGC-AAAAGA
60 TTTAAGAGACAAACTTTGATTTACA--AAAAT-GGTG-AAAGGAAAAGTTTTTCTTGCGAAACG-
* * * * *
2713584 AAATCATTAATATCATTTATCCTAATGAGAATA-ATGTG
120 AAAGCATCAATATCATGTATCC-AATGAGAAGACA-ATG
* * * * * * *
2713622 TTTATAGTGACTAAT--------G---ACA-A--A--AT--GAATCCATCTTTGTCTTTTCTGAA
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTAT-TTAA
* * * **
2713669 G-CACGAACTTAGACTTTACAAAAAAT-GTG---GGAAAAATGCCTTTCTTGC-AAACAGAAAGC
65 GAGACAAACTTTGA-TTTAC-AAAAATGGTGAAAGG-AAAA-GTTTTTCTTGCGAAAC-GAAAGC
* **
2713728 GTCAATATGGTGTATCCTAATGAGAAGACAATG
125 ATCAATATCATGTATCC-AATGAGAAGACAATG
* * * * * *
2713761 TTTATGGTGCCTAATCTGGAAAAGAATGGGGATTAGTATGAGTATTCTTTGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTC-ATGTTTGTCTTATTTAA
* * * * * ** *
2713826 AAGGCAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAGGTTTTTCCTTG-GACCCTAAAGCAT
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTT-CTTGCGAAACGAAAGCAT
* * * * * **
2713890 TAATTTTACGCATCCTAAT--GAAGGGAATG
127 CAATATCATGTATCC-AATGAGAAGACAATG
* * * * *
2713919 TGTTTTGGCT-CC-AATTCTC-ATAAACAATAGAGATT-GTTATGAGAA-TCGAAGCTTT-TCCT
1 T-TTATGG-TGCCTAA-TC-CGAAAAAGAATAGAGATTAG-TATGAGAATTC-ATG-TTTGTCTT
* ** * * * * *
2713978 ATTTAAGGGATGAGCTTTGATTTAAAGGAAAATAGG-GCAAA-GAAAAG-ATATCTATGC-AAAA
59 ATTTAAGAGACAAACTTTGATTTACA--AAAAT-GGTG-AAAGGAAAAGTTTTTCT-TGCGAAAC
* * *
2714039 GAAAATCATCAATATCATTTATCCTAATGAG--GAGAATG
119 G-AAAGCATCAATATCATGTATCC-AATGAGAAGACAATG
* * * * * *
2714077 TGGTTATAGTGCCTAA--CGACAAAATGAAT-GAAAATCAATACT-AGAATCCATGTTTGTCTTT
1 T--TTATGGTGCCTAATCCGA-AAAA-GAATAG-AGATTAGTA-TGAGAATTCATGTTTGTCTTA
* * * **
2714138 TTTGAAG-CACGAACTTAGACTTTACAAAAATGGTG---GGAAAATGCCTTTCTTGCGAAACGAA
60 TTT-AAGAGACAAACTTTGA-TTTACAAAAATGGTGAAAGGAAAA-GTTTTTCTTGCGAAACGAA
* *
2714199 AGCATCAATTTGATGTATCCAATGAGAAGACAATG
122 AGCATCAATATCATGTATCCAATGAGAAGACAATG
* * * * *
2714234 TTTGTGGTGCCTAATCCAAAAAAGAATGGGGATTAGTATGAGTATTCATGTTTGTCTTATTTAA-
1 TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAAG
* * * * * ** * *
2714298 ACAGCAAACTTTGATTCTATAAAAAATGGTGGAAGGAAAAGTTTTT-TCGGGGACCCTATAGCAT
66 AGA-CAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCT-TGCGAAACGAAAGCAT
*
2714362 CAATTTCATGTATCCTAATGATG--GA-AATG
127 CAATATCATGTATCC-AATGA-GAAGACAATG
* * * * * *
2714391 TGTT-TTG-GCTCTGATTTTCG-TAAAGAA-AGGAGATT-GTTACGAGAA-TCGATGCTTGTCTT
1 T-TTATGGTGC-CT-A-ATCCGAAAAAGAATA-GAGATTAG-TATGAGAATTC-ATGTTTGTCTT
** * * * * *
2714450 ATTTAAGAGATGAACTTTGATTTAAAGGAAAACAGG-GCAAA-GAAAAG-ATTTCATGC-AAAAG
59 ATTTAAGAGACAAACTTTGATTTACA--AAAA-TGGTG-AAAGGAAAAGTTTTTCTTGCGAAACG
* * * **
2714511 AAAATCATCAATATCATTTATCCTAATGAGGAGGA-TGTG
120 -AAAGCATCAATATCATGTATCC-AATGA-GAAGACAATG
* * * * *
2714550 TTTA-GTGTGCCTAAT--GATAAAGTGAAT-GAAAATCAATACT-AGAATCCATGTTTGTCTCT-
1 TTTATG-GTGCCTAATCCGA-AAA-AGAATAG-AGATTAGTA-TGAGAATTCATGTTTGTCT-TA
* * * ** * *
2714609 TTTGA-AG-CATGAACTTAGACTTTACAAAAAATCGTG---GGAAAAATGCCTTTCTTGCAAAAT
60 TTTAAGAGACA--AACTTTGA-TTTAC-AAAAATGGTGAAAGG-AAAA-GTTTTTCTTGCGAAAC
* ** *
2714669 GAAAGCGTCAATAAAATGTATCCAACGAGAAGACAATG
119 GAAAGCATCAATATCATGTATCCAATGAGAAGACAATG
* * * * * *
2714707 TTTGTGGAGCCTAATCC-AGAAGAGAAT-GGGATTAGTACGAGTATTCATGTTTGTCTTATTTAA
1 TTTATGGTGCCTAATCCGA-AAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAA
* * *
2714770 GAGACAAACTTTGATTCTATCAAAAATGGTGGAAGGAAAAGTTTTTCTTGC-AACCCCAAAGCAT
65 GAGACAAACTTTGATT-TA-CAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAA-ACGAAAGCAT
*
2714834 CAATTTCATGTATCCTAATGA
127 CAATATCATGTATCC-AATGA
2714855 AGGGAATGTG
Statistics
Matches: 8646, Mismatches: 2440, Indels: 2353
0.64 0.18 0.18
Matches are distributed among these distances:
137 1 0.00
138 37 0.00
139 73 0.01
140 11 0.00
141 49 0.01
142 19 0.00
143 4 0.00
147 4 0.00
148 2 0.00
150 7 0.00
151 5 0.00
152 2 0.00
153 7 0.00
154 65 0.01
155 329 0.04
156 661 0.08
157 2002 0.23
158 3243 0.38
159 1629 0.19
160 398 0.05
161 73 0.01
162 14 0.00
163 5 0.00
164 1 0.00
165 5 0.00
ACGTcount: A:0.36, C:0.13, G:0.19, T:0.31
Consensus pattern (156 bp):
TTTATGGTGCCTAATCCGAAAAAGAATAGAGATTAGTATGAGAATTCATGTTTGTCTTATTTAAG
AGACAAACTTTGATTTACAAAAATGGTGAAAGGAAAAGTTTTTCTTGCGAAACGAAAGCATCAAT
ATCATGTATCCAATGAGAAGACAATG
Found at i:2715646 original size:13 final size:13
Alignment explanation
Indices: 2715628--2715658 Score: 53
Period size: 13 Copynumber: 2.4 Consensus size: 13
2715618 GTTACAAGCT
2715628 ATGTATCGATACA
1 ATGTATCGATACA
2715641 ATGTATCGATACA
1 ATGTATCGATACA
*
2715654 TTGTA
1 ATGTA
2715659 CCTTGTATCG
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
13 17 1.00
ACGTcount: A:0.35, C:0.13, G:0.16, T:0.35
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:2715756 original size:19 final size:19
Alignment explanation
Indices: 2715703--2715759 Score: 53
Period size: 19 Copynumber: 2.9 Consensus size: 19
2715693 CTGCCAGTTT
**
2715703 CATGTATCGATACAATTTGTC
1 CATGTATCGATACAA--TGAA
*
2715724 CATATATC-AGTACAATGAA
1 CATGTATCGA-TACAATGAA
2715743 CATGTATCGATACAATG
1 CATGTATCGATACAATG
2715760 TATCGATACA
Statistics
Matches: 30, Mismatches: 4, Indels: 6
0.75 0.10 0.15
Matches are distributed among these distances:
19 16 0.53
20 2 0.07
21 12 0.40
ACGTcount: A:0.37, C:0.18, G:0.14, T:0.32
Consensus pattern (19 bp):
CATGTATCGATACAATGAA
Found at i:2715762 original size:13 final size:13
Alignment explanation
Indices: 2715744--2715770 Score: 54
Period size: 13 Copynumber: 2.1 Consensus size: 13
2715734 TACAATGAAC
2715744 ATGTATCGATACA
1 ATGTATCGATACA
2715757 ATGTATCGATACA
1 ATGTATCGATACA
2715770 A
1 A
2715771 AGCAGCATGT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 14 1.00
ACGTcount: A:0.41, C:0.15, G:0.15, T:0.30
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:2724436 original size:13 final size:13
Alignment explanation
Indices: 2724418--2724448 Score: 53
Period size: 13 Copynumber: 2.4 Consensus size: 13
2724408 ACATTTCTTC
2724418 ATGTATCGATACA
1 ATGTATCGATACA
2724431 ATGTATCGATACA
1 ATGTATCGATACA
*
2724444 TTGTA
1 ATGTA
2724449 CCACGTATCG
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
13 17 1.00
ACGTcount: A:0.35, C:0.13, G:0.16, T:0.35
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:2724457 original size:33 final size:32
Alignment explanation
Indices: 2724398--2724464 Score: 91
Period size: 33 Copynumber: 2.0 Consensus size: 32
2724388 GTTACAAGCT
*
2724398 ATGTATCGATACATTTCTTCATGTATCGATACA
1 ATGTATCGATACATTTC-TCACGTATCGATACA
2724431 ATGTATCGATACATTGTAC-CACGTATCGATACA
1 ATGTATCGATACATT-T-CTCACGTATCGATACA
2724464 A
1 A
2724465 ATAGTGATAG
Statistics
Matches: 31, Mismatches: 1, Indels: 4
0.86 0.03 0.11
Matches are distributed among these distances:
33 29 0.94
34 1 0.03
35 1 0.03
ACGTcount: A:0.33, C:0.19, G:0.13, T:0.34
Consensus pattern (32 bp):
ATGTATCGATACATTTCTCACGTATCGATACA
Found at i:2724519 original size:21 final size:19
Alignment explanation
Indices: 2724493--2724566 Score: 76
Period size: 19 Copynumber: 3.7 Consensus size: 19
2724483 CTGCCAGTTT
**
2724493 CATGTATCGATACAATTTGTC
1 CATGTATCGATACAA--TGAA
*
2724514 CATGTATTGATACAATGAA
1 CATGTATCGATACAATGAA
* *
2724533 CATGTATCGATACAAAGTAG
1 CATGTATCGATACAATG-AA
2724553 CATGTATCGATACA
1 CATGTATCGATACA
2724567 TCTGGGAGTG
Statistics
Matches: 46, Mismatches: 6, Indels: 3
0.84 0.11 0.05
Matches are distributed among these distances:
19 17 0.37
20 15 0.33
21 14 0.30
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.31
Consensus pattern (19 bp):
CATGTATCGATACAATGAA
Found at i:2725531 original size:474 final size:475
Alignment explanation
Indices: 2724856--2726433 Score: 2538
Period size: 474 Copynumber: 3.3 Consensus size: 475
2724846 CCTAACAGAC
*
2724856 ATTATTAGGAGAATCGATGCTTGTCTTATTTAAGGGATAAACTTTGATTTAAAGGAAAATAGGGC
1 ATTATTAGGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGC
*
2724921 AAAGAAAAGATTTCCAAGCAAAAGAAAATCATCAATATAATTTATCCTAATGAGGAGAATTTGTT
66 AAAGAAAAGATTTCCAAGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATTTGTT
2724986 TATAGTGCCTAATGACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCCATTGAAGC
131 TATAGTGCCTAATGACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCCATTGAAGC
* *
2725051 ACAAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCATGCGAAATGAAAGCGTCAATA
196 ACAAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCAAAATGAAAGCGTCAATA
*
2725116 TGATGTATCCTAAAGAGAAGACTATGTTTATAGTGCCTTATCCTGAAAAGAATGGGGATTAGTGT
261 TGATGTATCCTAAAGAGAAGACTATGTTTATAGTGCCTTATCCAGAAAAGAATGGGGATTAGTGT
* *
2725181 GAGTATTCATGTTTGTCTTATTTGAGAGACAAACTTTAATTCTATCAAAAACGATGGAAGGAAAA
326 GAGTATTCATGTTTGTCTTATTTGAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAA
* *
2725246 GTTTTTCTTGTGACCACAAAGCATCAATTTCATGTATCCTAATGAAAGGAATGTGCTTTGGCTTT
391 GTTTTTCTTGTGACCCCAAAGCATCAATTTCATGTATCCTAATGAAAGGAATGTGCTTTGGCTCT
**
2725311 GATTCTCATAAAGAATATAG
456 GATTCTCATAAAGAATGGAG
*
2725331 ATTATTAGGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGTTTTAAAGGAAAATA-GGC
1 ATTATTAGGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGC
* *
2725395 AAAGAAAAGATTTCCAAGCAAATA-AAAATTATCAATATCATTTATCCTAATGAGGAGATTTTGT
66 AAAGAAAAGATTTCCAAGCAAA-AGAAAATCATCAATATCATTTATCCTAATGAGGAGAATTTGT
2725459 TTATAGTGCCTAATGACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCCATTGAAG
130 TTATAGTGCCTAATGACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCCATTGAAG
* * *
2725524 CACAAACTTAGACTTTACAAAAAAGGGTGGGAAAAAAGCCTTTTTTGCAAAATGAAAGTGTCAAT
195 CACAAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCAAAATGAAAGCGTCAAT
*
2725589 ATGATGTATCCTAAAGAGAAGACTATGTTTATAGTGCCTTATCCAGAAAAGAATAGGGATTAGTG
260 ATGATGTATCCTAAAGAGAAGACTATGTTTATAGTGCCTTATCCAGAAAAGAATGGGGATTAGTG
** *
2725654 TGAGTATTCATGTTTGTCTTATTTGAGAGACAAACTTTGATTCTATCAGTAACGGTGAAAGGAAA
325 TGAGTATTCATGTTTGTCTTATTTGAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAA
* *
2725719 AGTTTTTCTTGCGACCCCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGCTTTGGCTC
390 AGTTTTTCTTGTGACCCCAAAGCATCAATTTCATGTATCCTAATGAAAGGAATGTGCTTTGGCTC
*
2725784 TGATTCTCGTAAAGAATGGAG
455 TGATTCTCATAAAGAATGGAG
2725805 ATTATTAGGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGC
1 ATTATTAGGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGC
* *
2725870 AAAGAAAAGATTTCCATGCAAAAGAAAATCATCAATATCAATTATCCTAATGAGGAGAATTTGTT
66 AAAGAAAAGATTTCCAAGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATTTGTT
* * * * * * * **
2725935 TGTAGTGCCTAACT-ACAAAATAAATAAAGATCAAAACTGGAATCCATGCTTATCTCTTTTGAAG
131 TATAGTGCCTAA-TGACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCCATTGAAG
* * **
2725999 CACAAACTTAGACTTTACAAAAAATAGTGAGAAAAAAGGATTTCTTGCAAAATGAAAGCGTCAAT
195 CACAAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCAAAATGAAAGCGTCAAT
* * * ** *
2726064 -TTATGTATCCTAATGATAAGAAAATGTTTATGGTG-CTTAATCCAGAAAAGAATGGGGATTAGT
260 ATGATGTATCCTAAAGAGAAGACTATGTTTATAGTGCCTT-ATCCAGAAAAGAATGGGGATTAGT
* * * *
2726127 ATGAGTATTCATATTTGTCTTATTTAAGAGACAAACTTTGATTTTATCAAAAACGGTGGAAGGAA
324 GTGAGTATTCATGTTTGTCTTATTTGAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAA
* * * * *
2726192 ATGTTTTTCTTATGACCCCAAAGCATCAATTTCATGTATCCTAATTAAAAGAATGTG-TTTCGTC
389 AAGTTTTTCTTGTGACCCCAAAGCATCAATTTCATGTATCCTAATGAAAGGAATGTGCTTT-GGC
2726256 TCTGATTCTCATAAAGAATGGAG
453 TCTGATTCTCATAAAGAATGGAG
*
2726279 ATTATTACGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGC
1 ATTATTAGGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGC
* * * * *
2726344 AAAGAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGAATAATGTGTT
66 AAAGAAAAGATTTCCAAGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATTTGTT
2726409 TATAGTGCCTAATGACAAAATGAAT
131 TATAGTGCCTAATGACAAAATGAAT
2726434 CCATGTTTGT
Statistics
Matches: 1021, Mismatches: 75, Indels: 15
0.92 0.07 0.01
Matches are distributed among these distances:
473 7 0.01
474 780 0.76
475 233 0.23
476 1 0.00
ACGTcount: A:0.38, C:0.12, G:0.19, T:0.31
Consensus pattern (475 bp):
ATTATTAGGAGAATCGATGCTTGTCTTATTTAAGGGATGAACTTTGATTTAAAGGAAAATAGGGC
AAAGAAAAGATTTCCAAGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGGAGAATTTGTT
TATAGTGCCTAATGACAAAATGAATGAAGATCAATACTAGAATCCATGTTTGTCTCCATTGAAGC
ACAAACTTAGACTTTACAAAAAATGGTGGGAAAAAAGCCTTTCTTGCAAAATGAAAGCGTCAATA
TGATGTATCCTAAAGAGAAGACTATGTTTATAGTGCCTTATCCAGAAAAGAATGGGGATTAGTGT
GAGTATTCATGTTTGTCTTATTTGAGAGACAAACTTTGATTCTATCAAAAACGGTGGAAGGAAAA
GTTTTTCTTGTGACCCCAAAGCATCAATTTCATGTATCCTAATGAAAGGAATGTGCTTTGGCTCT
GATTCTCATAAAGAATGGAG
Found at i:2725687 original size:158 final size:158
Alignment explanation
Indices: 2724922--2726179 Score: 393
Period size: 158 Copynumber: 7.9 Consensus size: 158
2724912 AAATAGGGCA
* * * * * * * * *
2724922 AAGAAAAGATTTCCAAGCAAAA-GAAAATCATCAATATAATTTATCCTAATGAGGAGAATTTGTT
1 AAGAAAAGCTTT-CATGCAAAATG-AAAGCATCAATATCATGTATCCTAAAGAGAAGACTATGTT
* * * * * * * * *
2724986 TATAGTGCCTAATGACAAAATGAAT-GAAGATCAATACT-AGAATCCATGTTTGTCTCCA-TTGA
64 TATAGTGCCTTAT-CCAAAAAGAATAG-AGATTAGTAGTGAGTATTCATGTTTGTCT-TATTTGA
2725048 -AGCACAAACTTAGACTTTACAAAAAATGGTGGG
126 GAG-ACAAACTTAGACTTTACAAAAAATGGTGGG
* * *
2725081 AA-AAAAGCCTTTCATGCGAAATGAAAGCGTCAATATGATGTATCCTAAAGAGAAGACTATGTTT
1 AAGAAAAG-CTTTCATGCAAAATGAAAGCATCAATATCATGTATCCTAAAGAGAAGACTATGTTT
* * *
2725145 ATAGTGCCTTATCCTGAAAAGAATGGGGATTAGT-GTGAGTATTCATGTTTGTCTTATTTGAGAG
65 ATAGTGCCTTATCC-AAAAAGAATAGAGATTAGTAGTGAGTATTCATGTTTGTCTTATTTGAGAG
* *
2725209 ACAAACTTTA-A-TTCTATC-AAAAACGAT-GG
129 ACAAAC-TTAGACTT-TA-CAAAAAATGGTGGG
* * * ** * * * * *
2725238 AAGGAAAAGTTTTTCTTGTGACCA-CAAAGCATCAATTTCATGTATCCTAATGA-AAGGAATGTG
1 AA-GAAAAG-CTTTCATG-CAAAATGAAAGCATCAATATCATGTATCCTAAAGAGAA-GACTATG
* * * * * * *
2725301 CTT-T-G-GCTTTGATTCTCATAAAGAATATAGATTATTAG-GAG-AATCGATGCTTGTCTTATT
62 TTTATAGTGCCTT-A-TC-CAAAAAGAATAGAGATTAGTAGTGAGTATTC-ATGTTTGTCTTATT
* * ** * * * **
2725361 TAAGGGATGAACTTTG-TTTTA-AAGGAAAATAG-GCA
123 TGAGAGACAAACTTAGACTTTACAA--AAAATGGTGGG
* * * ** * * * * *
2725396 AAGAAAAGATTTCCAAGC-AAATAAAAATTATCAATATCATTTATCCTAATGAGGAGATTTTGTT
1 AAGAAAAGCTTT-CATGCAAAAT-GAAAGCATCAATATCATGTATCCTAAAGAGAAGACTATGTT
* * * * * * * * *
2725460 TATAGTGCCTAATGACAAAATGAAT-GAAGATCAATACT-AGAATCCATGTTTGTCTCCA-TTGA
64 TATAGTGCCTTAT-CCAAAAAGAATAG-AGATTAGTAGTGAGTATTCATGTTTGTCT-TATTTGA
*
2725522 -AGCACAAACTTAGACTTTACAAAAAAGGGTGGG
126 GAG-ACAAACTTAGACTTTACAAAAAATGGTGGG
** ** *
2725555 AA-AAAAGCCTTTTTTGCAAAATGAAAGTGTCAATATGATGTATCCTAAAGAGAAGACTATGTTT
1 AAGAAAAG-CTTTCATGCAAAATGAAAGCATCAATATCATGTATCCTAAAGAGAAGACTATGTTT
*
2725619 ATAGTGCCTTATCCAGAAAAGAATAGGGATTAGT-GTGAGTATTCATGTTTGTCTTATTTGAGAG
65 ATAGTGCCTTATCCA-AAAAGAATAGAGATTAGTAGTGAGTATTCATGTTTGTCTTATTTGAGAG
* ** * *
2725683 ACAAACTTTGA-TTCTATC-AGTAACGGT-GA
129 ACAAACTTAGACTT-TA-CAAAAAATGGTGGG
* * * **** * * * * * *
2725712 AAGGAAAAGTTTTTCTTGCGACCCCAAAGCATCAATTTCATGTATCCTAATGA-AGGGAATGTGC
1 AA-GAAAAG-CTTTCATGCAAAATGAAAGCATCAATATCATGTATCCTAAAGAGA-AGACTATGT
* ** * * * *
2725776 TT-T-G-GCTCTGATTCTCGTAAAGAATGGAGATTATTAG-GAG-AATCGATGCTTGTCTTATTT
63 TTATAGTGC-CTTA-TC-CAAAAAGAATAGAGATTAGTAGTGAGTATTC-ATGTTTGTCTTATTT
* * ** * **
2725836 AAGGGATGAACTTTGA-TTTA-AAGGAAAATAGG-GCA
124 GAGAGACAAACTTAGACTTTACAA--AAAAT-GGTGGG
* * * * * *
2725871 AAGAAAAGATTTCCATGCAAAA-GAAAATCATCAATATCAAT-TATCCTAATGAGGAGAATTTGT
1 AAGAAAAGCTTT-CATGCAAAATG-AAAGCATCAATATC-ATGTATCCTAAAGAGAAGACTATGT
* * * * * ** * * * * *
2725934 TTGTAGTGCCTAACTACAAAATA-AATAAAGATCAAAACTG-GAATCCATGCTTATCTCT-TTTG
63 TTATAGTGCCTTA-TCCAAAA-AGAATAGAGATTAGTAGTGAGTATTCATGTTTGTCT-TATTTG
* *
2725996 A-AGCACAAACTTAGACTTTACAAAAAATAGTGAG
125 AGAG-ACAAACTTAGACTTTACAAAAAATGGTGGG
* * * * * * **
2726030 AA-AAAAGGATTTCTTGCAAAATGAAAGCGTCAAT-TTATGTATCCTAATGATAAGAAAATGTTT
1 AAGAAAA-GCTTTCATGCAAAATGAAAGCATCAATATCATGTATCCTAAAGAGAAGACTATGTTT
* * * * *
2726093 ATGGTG-CTTAATCCAGAAAAGAATGGGGATTAGTA-TGAGTATTCATATTTGTCTTATTTAAGA
65 ATAGTGCCTT-ATCCA-AAAAGAATAGAGATTAGTAGTGAGTATTCATGTTTGTCTTATTTGAGA
* *
2726156 GACAAACTTTGATTTTATCAAAAA
128 GACAAACTTAGACTTTA-CAAAAA
2726180 CGGTGGAAGG
Statistics
Matches: 794, Mismatches: 217, Indels: 177
0.67 0.18 0.15
Matches are distributed among these distances:
155 1 0.00
156 22 0.03
157 145 0.18
158 421 0.53
159 181 0.23
160 20 0.03
161 4 0.01
ACGTcount: A:0.38, C:0.13, G:0.19, T:0.31
Consensus pattern (158 bp):
AAGAAAAGCTTTCATGCAAAATGAAAGCATCAATATCATGTATCCTAAAGAGAAGACTATGTTTA
TAGTGCCTTATCCAAAAAGAATAGAGATTAGTAGTGAGTATTCATGTTTGTCTTATTTGAGAGAC
AAACTTAGACTTTACAAAAAATGGTGGG
Found at i:2726358 original size:158 final size:158
Alignment explanation
Indices: 2725715--2726409 Score: 363
Period size: 158 Copynumber: 4.4 Consensus size: 158
2725705 ACGGTGAAAG
* * ** **
2725715 GAAAAGTTTTTCTTGCGACCCCAAAGCATCAATTTCATGTATCCTAATGAAGGGAATGTGCTTTG
1 GAAAAGATTTTCTTACGAAACCAAAGCATCAATTTCATGTATCCTAATGAAAAGAATGTG-TTTG
* * * **
2725780 -GCTCTGATTCTCGTAAAGAATGGAGATTATTAGGAGAATCGATGCTTGTCTTATTTAAGGGATG
65 TACTCT-ATTCTCATAAAGAATGGAGATTATTACGAGAATCGATGCTTGTCTTATTTAAGGGACA
2725844 AACTTTGATTTAAAGGAAAATAGG-GCAAA
129 AACTTTGATTTAAAGGAAAATAGGAGCAAA
* * * * ** * * ** *
2725873 GAAAAGATTTCCATGCAAAAGAAAATCATCAATATCAAT-TATCCTAATGAGGAGAATTTGTTTG
1 GAAAAGATTTTCTTACGAAACCAAAGCATCAATTTC-ATGTATCCTAATGAAAAGAATGTGTTTG
* * * ** * ** * *
2725937 TAGTGCCTA-ACTACA-AAATAAATAAAGATCAAAACTG-GAATCCATGCTTATCTCT-TTTGAA
65 TACT--CTATTCT-CATAAA-GAATGGAGATTATTAC-GAGAATCGATGCTTGTCT-TATTT-AA
* *
2725998 -GCACAAACTTAGACTTTACAA--AAAATAGTGAG-AAA
123 GGGACAAACTTTGA-TTTA-AAGGAAAATAG-GAGCAAA
* * * ** * *
2726033 -AAAGGA-TTTCTTGCAAAATGAAAGCGTCAATTT-ATGTATCCTAATGATAAGAAAATGT-TTA
1 GAAAAGATTTTCTTACGAAACCAAAGCATCAATTTCATGTATCCTAATGA-AA-AGAATGTGTT-
* * * * * * * ** *
2726094 TGGTGCT-TAATC-CAGAAAAGAATGGGGATTAGTATGAGTATTC-ATATTTGTCTTATTTAAGA
63 T-GTACTCTATTCTCA-TAAAGAATGGAGATTATTACGAG-AATCGATGCTTGTCTTATTTAAGG
* ** * * *
2726156 GACAAACTTTGATTT-TATCAAAA-ACGGTGGAAG
125 GACAAACTTTGATTTAAAGGAAAATA-GGAGCAAA
* * * ** *
2726189 GAAATGTTTTTCTTATGACCCCAAAGCATCAATTTCATGTATCCTAATTAAAAGAATGTGTTTCG
1 GAAAAGATTTTCTTACGAAACCAAAGCATCAATTTCATGTATCCTAATGAAAAGAATGTGTTT-G
**
2726254 T-CTCTGATTCTCATAAAGAATGGAGATTATTACGAGAATCGATGCTTGTCTTATTTAAGGGATG
65 TACTCT-ATTCTCATAAAGAATGGAGATTATTACGAGAATCGATGCTTGTCTTATTTAAGGGACA
2726318 AACTTTGATTTAAAGGAAAATAGG-GCAAA
129 AACTTTGATTTAAAGGAAAATAGGAGCAAA
* * * ** * * * * *
2726347 GAAAAGATTTTCATGCAAAAGAAAATCATCAATATCATTTATCCTAATGAGAATAATGTGTTT
1 GAAAAGATTTTCTTACGAAACCAAAGCATCAATTTCATGTATCCTAATGAAAAGAATGTGTTT
2726410 ATAGTGCCTA
Statistics
Matches: 390, Mismatches: 108, Indels: 78
0.68 0.19 0.14
Matches are distributed among these distances:
154 1 0.00
155 3 0.01
156 20 0.05
157 63 0.16
158 203 0.52
159 79 0.20
160 18 0.05
161 3 0.01
ACGTcount: A:0.37, C:0.13, G:0.18, T:0.32
Consensus pattern (158 bp):
GAAAAGATTTTCTTACGAAACCAAAGCATCAATTTCATGTATCCTAATGAAAAGAATGTGTTTGT
ACTCTATTCTCATAAAGAATGGAGATTATTACGAGAATCGATGCTTGTCTTATTTAAGGGACAAA
CTTTGATTTAAAGGAAAATAGGAGCAAA
Found at i:2727716 original size:59 final size:59
Alignment explanation
Indices: 2727624--2728508 Score: 1039
Period size: 59 Copynumber: 15.4 Consensus size: 59
2727614 CTTCTCCTTC
* * *
2727624 CACCTTCAGTCCTCAAAGAGCGGGATGCCTTTTCTTTTAAAGCTCACACAAGTTGGTGG
1 CACCTTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
2727683 CACCTTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
1 CACCTTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
*
2727742 CACCTTCAGTCCTCAAAGAGCGGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
1 CACCTTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
* * * * *
2727801 CACCTTCAGTCGTCAAAGAGCGGGACGTCTTTTCTTTTAAAGCCCACCCGAGTTGGTGG
1 CACCTTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
* * * * *
2727860 CACTTTCAGTCCTCAAAGAGCAGGATGCTTTTTCTTTTCGAAGCCTACACAAGTTGGTGG
1 CACCTTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTT-AAAGCCCACACAAGTTGGTGG
*
2727920 CACCTTTCAGTCCTCAAAGAGCAGGACACC-TTTC----AAAGCCCACACAAGTTGGTGG
1 CACC-TTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
** *
2727975 CATTTTCCAGTCCTCAAAGAGCAGGACACC-TTTC----AAAGCCCACACAAGTTGGTGG
1 CACCTT-CAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
** * *
2728030 CATTTTCTAGTCCTCAGAGAGCAGGACACC---TC--TTAAAGCCCACACAAGTTGGTGG
1 CACCTTC-AGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
* * *
2728085 CACCTTCAGTCCTCAAAGAGCGGGACACATTTTCTTTTAAAGCCCACACAAGTTGGTGG
1 CACCTTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
* *
2728144 CACCTTCAGTCCTCAAAGAGCGGGACGCCTTTTCTTTTAAAGCCCACCCAAGTTGGTGG
1 CACCTTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
* *
2728203 CACCTTCAGTCCTCAAAGAGCAGGATGCTTTTTCTTTTCAAAGCCCACACAAGTTGGTGG
1 CACCTTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTT-AAAGCCCACACAAGTTGGTGG
* *
2728263 CACCTTTCAGTCCCCAAAGAGCAGGAC-CC----CTTTCAAAGCCCACACAAGTTGGTGG
1 CACC-TTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
* * * *
2728318 CGCCTTTCAGTCCCCAAAGAGCAGGAC-AC----CTGTTAAAGCCCACACAAGTTGGTGG
1 CACC-TTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
** * *
2728373 CATTTTCCAGTCCTTAAAGAGCAGGACACC---TC--TTAAAGCCCACACAAGTTGGTGG
1 CACCTT-CAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
*
2728428 CACCTTTCAGTCCTCAAAGAGCAGGACGCC-TTTC----AAAGCCCACACGAGTTGGTGG
1 CACC-TTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
* * * *
2728483 CACAATTTACTCCTCAATGAGCAGGA
1 CAC-CTTCAGTCCTCAAAGAGCAGGA
2728509 TACACTTTAT
Statistics
Matches: 744, Mismatches: 62, Indels: 44
0.88 0.07 0.05
Matches are distributed among these distances:
53 2 0.00
54 24 0.03
55 300 0.40
56 7 0.01
57 5 0.01
59 315 0.42
60 49 0.07
61 42 0.06
ACGTcount: A:0.26, C:0.28, G:0.21, T:0.24
Consensus pattern (59 bp):
CACCTTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAAGCCCACACAAGTTGGTGG
Found at i:2727967 original size:55 final size:55
Alignment explanation
Indices: 2727657--2728508 Score: 886
Period size: 55 Copynumber: 14.9 Consensus size: 55
2727647 GATGCCTTTT
* * *
2727657 CTTTTAAAGCTCACACAAGTTGGTGGCACC-TTCAGTCCTCAAAGAGCAGGACGC
1 CTTTCAAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACAC
* *
2727711 CTTTTCTTTTAAAGCCCACACAAGTTGGTGGCACC-TTCAGTCCTCAAAGAGCGGGACGC
1 C-TTTC----AAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACAC
* * *
2727770 CTTTTCTTTTAAAGCCCACACAAGTTGGTGGCACC-TTCAGTCGTCAAAGAGCGGGACGTC
1 C-TTTC----AAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGAC-AC
* * * *
2727830 TTTTCTTTTAAAGCCCACCCGAGTTGGTGGCA-CTTTCAGTCCTCAAAGAGCAGGATGCTTTTTC
1 ----CTTTCAAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGA--C----AC
* * *
2727894 TTTTCGAAGCCTACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACAC
1 CTTTCAAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACAC
*
2727949 CTTTCAAAGCCCACACAAGTTGGTGGCA-TTTTCCAGTCCTCAAAGAGCAGGACAC
1 CTTTCAAAGCCCACACAAGTTGGTGGCACCTTT-CAGTCCTCAAAGAGCAGGACAC
* *
2728004 CTTTCAAAGCCCACACAAGTTGGTGGCA-TTTTCTAGTCCTCAGAGAGCAGGACAC
1 CTTTCAAAGCCCACACAAGTTGGTGGCACCTTTC-AGTCCTCAAAGAGCAGGACAC
*
2728059 CTCTT-AAAGCCCACACAAGTTGGTGGCACC-TTCAGTCCTCAAAGAGCGGGACAC
1 CT-TTCAAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACAC
* * *
2728113 ATTTTCTTTTAAAGCCCACACAAGTTGGTGGCACC-TTCAGTCCTCAAAGAGCGGGACGC
1 -----CTTTCAAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACAC
* *
2728172 CTTTTCTTTTAAAGCCCACCCAAGTTGGTGGCACC-TTCAGTCCTCAAAGAGCAGGATGCTTTTT
1 C-TTTC----AAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGA--C----A
2728236 C
55 C
* * *
2728237 TTTTCAAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCCCAAAGAGCAGGACCC
1 CTTTCAAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACAC
* *
2728292 CTTTCAAAGCCCACACAAGTTGGTGGCGCCTTTCAGTCCCCAAAGAGCAGGACAC
1 CTTTCAAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACAC
* *
2728347 CTGTT-AAAGCCCACACAAGTTGGTGGCA-TTTTCCAGTCCTTAAAGAGCAGGACAC
1 CT-TTCAAAGCCCACACAAGTTGGTGGCACCTTT-CAGTCCTCAAAGAGCAGGACAC
*
2728402 CTCTT-AAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACGC
1 CT-TTCAAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACAC
* * * *
2728457 CTTTCAAAGCCCACACGAGTTGGTGGCACAATTT-ACTCCTCAATGAGCAGGA
1 CTTTCAAAGCCCACACAAGTTGGTGGCAC-CTTTCAGTCCTCAAAGAGCAGGA
2728509 TACACTTTAT
Statistics
Matches: 704, Mismatches: 50, Indels: 87
0.84 0.06 0.10
Matches are distributed among these distances:
54 30 0.04
55 319 0.45
56 10 0.01
58 3 0.00
59 239 0.34
60 47 0.07
61 45 0.06
63 3 0.00
64 7 0.01
65 1 0.00
ACGTcount: A:0.26, C:0.28, G:0.21, T:0.24
Consensus pattern (55 bp):
CTTTCAAAGCCCACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACAC
Found at i:2728008 original size:27 final size:27
Alignment explanation
Indices: 2727920--2728008 Score: 67
Period size: 26 Copynumber: 3.3 Consensus size: 27
2727910 AAGTTGGTGG
2727920 CACCTTT-CAGTCCTCAAAGAGCAGGA
1 CACCTTTCCAGTCCTCAAAGAGCAGGA
* * * * **
2727946 CACCTTTCAAAGCCCACACAAGTTGGTGG-
1 CACCTTTC-CAGTCCTCA-AAG-AGCAGGA
*
2727975 CA-TTTTCCAGTCCTCAAAGAGCAGGA
1 CACCTTTCCAGTCCTCAAAGAGCAGGA
2728001 CACCTTTC
1 CACCTTTC
2728009 AAAGCCCACA
Statistics
Matches: 43, Mismatches: 14, Indels: 11
0.63 0.21 0.16
Matches are distributed among these distances:
25 3 0.07
26 12 0.28
27 10 0.23
28 10 0.23
29 5 0.12
30 3 0.07
ACGTcount: A:0.28, C:0.31, G:0.18, T:0.22
Consensus pattern (27 bp):
CACCTTTCCAGTCCTCAAAGAGCAGGA
Found at i:2728110 original size:343 final size:341
Alignment explanation
Indices: 2727659--2728485 Score: 1324
Period size: 343 Copynumber: 2.4 Consensus size: 341
2727649 TGCCTTTTCT
* ** *
2727659 TTTAAAGCTCACACAAGTTGGTGGCACCTTCAGTCCTCAAAGAGCAGGACGCCTTTTCTTTTAAA
1 TTTAAAGCCCACACAAGTTGGTGGCATTTTCAGTCCTCAAAGAGCAGGACACC---TC--TTAAA
2727724 GCCCACACAAGTTGGTGGCACCTTCAGTCCTCAAAGAGCGGGACGCCTTTTCTTTTAAAGCCCAC
61 GCCCACACAAGTTGGTGGCACCTTCAGTCCTCAAAGAGCGGGACGCCTTTTCTTTTAAAGCCCAC
* * *
2727789 ACAAGTTGGTGGCACCTTCAGTCGTCAAAGAGCGGGACGTCTTTTCTTTTAAAGCCCACCCGAGT
126 ACAAGTTGGTGGCACCTTCAGTCCTCAAAGAGCGGGACGCCTTTTCTTTTAAAGCCCACCCAAGT
* * *
2727854 TGGTGGCACTTTCAGTCCTCAAAGAGCAGGATGCTTTTTCTTTTCGAAGCCTACACAAGTTGGTG
191 TGGTGGCACCTTCAGTCCTCAAAGAGCAGGATGCTTTTTCTTTTCAAAGCCCACACAAGTTGGTG
* *
2727919 GCACCTTTCAGTCCTCAAAGAGCAGGACACCTTTCAAAGCCCACACAAGTTGGTGGC-ATTTTCC
256 GCACCTTTCAGTCCCCAAAGAGCAGGACACCTTTCAAAGCCCACACAAGTTGGTGGCGACTTT-C
*
2727983 AGTCCTCAAAGAGCAGGACACC
320 AGTCCCCAAAGAGCAGGACACC
*
2728005 TTTCAAAGCCCACACAAGTTGGTGGCATTTTCTAGTCCTCAGAGAGCAGGACACCTCTTAAAGCC
1 TTT-AAAGCCCACACAAGTTGGTGGCATTTTC-AGTCCTCAAAGAGCAGGACACCTCTTAAAGCC
* *
2728070 CACACAAGTTGGTGGCACCTTCAGTCCTCAAAGAGCGGGACACATTTTCTTTTAAAGCCCACACA
64 CACACAAGTTGGTGGCACCTTCAGTCCTCAAAGAGCGGGACGCCTTTTCTTTTAAAGCCCACACA
2728135 AGTTGGTGGCACCTTCAGTCCTCAAAGAGCGGGACGCCTTTTCTTTTAAAGCCCACCCAAGTTGG
129 AGTTGGTGGCACCTTCAGTCCTCAAAGAGCGGGACGCCTTTTCTTTTAAAGCCCACCCAAGTTGG
2728200 TGGCACCTTCAGTCCTCAAAGAGCAGGATGCTTTTTCTTTTCAAAGCCCACACAAGTTGGTGGCA
194 TGGCACCTTCAGTCCTCAAAGAGCAGGATGCTTTTTCTTTTCAAAGCCCACACAAGTTGGTGGCA
* *
2728265 CCTTTCAGTCCCCAAAGAGCAGGACCCCTTTCAAAGCCCACACAAGTTGGTGGCGCCTTTCAGTC
259 CCTTTCAGTCCCCAAAGAGCAGGACACCTTTCAAAGCCCACACAAGTTGGTGGCGACTTTCAGTC
2728330 CCCAAAGAGCAGGACACC
324 CCCAAAGAGCAGGACACC
*
2728348 TGTTAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTTAAAGAGCAGGACACCTCTTAAAGCC
1 T-TTAAAGCCCACACAAGTTGGTGGCATTTT-CAGTCCTCAAAGAGCAGGACACCTCTTAAAGCC
*
2728413 CACACAAGTTGGTGGCACCTTTCAGTCCTCAAAGAGCAGGACGCC-TTTC----AAAGCCCACAC
64 CACACAAGTTGGTGGCACC-TTCAGTCCTCAAAGAGCGGGACGCCTTTTCTTTTAAAGCCCACAC
*
2728473 GAGTTGGTGGCAC
128 AAGTTGGTGGCAC
2728486 AATTTACTCC
Statistics
Matches: 451, Mismatches: 24, Indels: 19
0.91 0.05 0.04
Matches are distributed among these distances:
339 23 0.05
343 350 0.78
344 28 0.06
345 2 0.00
346 3 0.01
347 25 0.06
348 20 0.04
ACGTcount: A:0.26, C:0.29, G:0.22, T:0.24
Consensus pattern (341 bp):
TTTAAAGCCCACACAAGTTGGTGGCATTTTCAGTCCTCAAAGAGCAGGACACCTCTTAAAGCCCA
CACAAGTTGGTGGCACCTTCAGTCCTCAAAGAGCGGGACGCCTTTTCTTTTAAAGCCCACACAAG
TTGGTGGCACCTTCAGTCCTCAAAGAGCGGGACGCCTTTTCTTTTAAAGCCCACCCAAGTTGGTG
GCACCTTCAGTCCTCAAAGAGCAGGATGCTTTTTCTTTTCAAAGCCCACACAAGTTGGTGGCACC
TTTCAGTCCCCAAAGAGCAGGACACCTTTCAAAGCCCACACAAGTTGGTGGCGACTTTCAGTCCC
CAAAGAGCAGGACACC
Found at i:2728324 original size:29 final size:29
Alignment explanation
Indices: 2728238--2728374 Score: 80
Period size: 29 Copynumber: 4.9 Consensus size: 29
2728228 TGCTTTTTCT
2728238 TTTCAAAGCCCACACAAGTTGGTGGCACC
1 TTTCAAAGCCCACACAAGTTGGTGGCACC
* ** *
2728267 TTTC--AGTCCC-CA-AAG-AGCAGGACCCC
1 TTTCAAAG-CCCACACAAGTTGGTGG-CACC
*
2728293 TTTCAAAGCCCACACAAGTTGGTGGCGCC
1 TTTCAAAGCCCACACAAGTTGGTGGCACC
* **
2728322 TTTC--AGTCCC-CA-AAG-AGCAGGACACC
1 TTTCAAAG-CCCACACAAGTTGGTGG-CACC
2728348 TGTT-AAAGCCCACACAAGTTGGTGGCA
1 T-TTCAAAGCCCACACAAGTTGGTGGCA
2728375 TTTTCCAGTC
Statistics
Matches: 78, Mismatches: 15, Indels: 30
0.63 0.12 0.24
Matches are distributed among these distances:
25 6 0.08
26 17 0.22
27 16 0.21
28 14 0.18
29 19 0.24
30 6 0.08
ACGTcount: A:0.28, C:0.31, G:0.22, T:0.19
Consensus pattern (29 bp):
TTTCAAAGCCCACACAAGTTGGTGGCACC
Found at i:2729292 original size:21 final size:21
Alignment explanation
Indices: 2729266--2729322 Score: 105
Period size: 21 Copynumber: 2.7 Consensus size: 21
2729256 AAATTACCCA
2729266 AATGTATCGATACATTTGTAG
1 AATGTATCGATACATTTGTAG
*
2729287 AATGTATCGATACATTTGTGG
1 AATGTATCGATACATTTGTAG
2729308 AATGTATCGATACAT
1 AATGTATCGATACAT
2729323 CCTACAAATG
Statistics
Matches: 35, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
21 35 1.00
ACGTcount: A:0.33, C:0.11, G:0.19, T:0.37
Consensus pattern (21 bp):
AATGTATCGATACATTTGTAG
Found at i:2729402 original size:19 final size:19
Alignment explanation
Indices: 2729378--2729445 Score: 85
Period size: 19 Copynumber: 3.9 Consensus size: 19
2729368 AATTCAACAA
2729378 TTTGTATCGATACATAAGT
1 TTTGTATCGATACATAAGT
2729397 TTTGTATCGATAC--AA--
1 TTTGTATCGATACATAAGT
2729412 --TGTATCGATACATAAGT
1 TTTGTATCGATACATAAGT
*
2729429 ATTGTATCGATACATAA
1 TTTGTATCGATACATAA
2729446 TTAGCTACTG
Statistics
Matches: 43, Mismatches: 0, Indels: 12
0.78 0.00 0.22
Matches are distributed among these distances:
13 11 0.26
15 2 0.05
17 2 0.05
19 28 0.65
ACGTcount: A:0.35, C:0.12, G:0.15, T:0.38
Consensus pattern (19 bp):
TTTGTATCGATACATAAGT
Found at i:2729417 original size:13 final size:13
Alignment explanation
Indices: 2729399--2729423 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
2729389 ACATAAGTTT
2729399 TGTATCGATACAA
1 TGTATCGATACAA
2729412 TGTATCGATACA
1 TGTATCGATACA
2729424 TAAGTATTGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:2729421 original size:32 final size:32
Alignment explanation
Indices: 2729380--2729442 Score: 117
Period size: 32 Copynumber: 2.0 Consensus size: 32
2729370 TTCAACAATT
*
2729380 TGTATCGATACATAAGTTTTGTATCGATACAA
1 TGTATCGATACATAAGTATTGTATCGATACAA
2729412 TGTATCGATACATAAGTATTGTATCGATACA
1 TGTATCGATACATAAGTATTGTATCGATACA
2729443 TAATTAGCTA
Statistics
Matches: 30, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
32 30 1.00
ACGTcount: A:0.35, C:0.13, G:0.16, T:0.37
Consensus pattern (32 bp):
TGTATCGATACATAAGTATTGTATCGATACAA
Found at i:2729503 original size:13 final size:13
Alignment explanation
Indices: 2729485--2729510 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
2729475 CATTTTTCTA
2729485 TGTATCGATACAT
1 TGTATCGATACAT
2729498 TGTATCGATACAT
1 TGTATCGATACAT
2729511 GGATCTTTGT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:2729507 original size:33 final size:33
Alignment explanation
Indices: 2729465--2729531 Score: 98
Period size: 33 Copynumber: 2.0 Consensus size: 33
2729455 GCCAAGGAAA
***
2729465 TGTATCGATACATTTTTCTATGTATCGATACAT
1 TGTATCGATACATGGATCTATGTATCGATACAT
*
2729498 TGTATCGATACATGGATCTTTGTATCGATACAT
1 TGTATCGATACATGGATCTATGTATCGATACAT
2729531 T
1 T
2729532 TGGAAATTTT
Statistics
Matches: 30, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
33 30 1.00
ACGTcount: A:0.27, C:0.15, G:0.15, T:0.43
Consensus pattern (33 bp):
TGTATCGATACATGGATCTATGTATCGATACAT
Found at i:2731935 original size:51 final size:53
Alignment explanation
Indices: 2731871--2732212 Score: 178
Period size: 52 Copynumber: 6.5 Consensus size: 53
2731861 AGTTTCTCAA
* * * *
2731871 TTCTCCACAATCGGGGATATTCCAACTCCGATTTTATTTTC-AAAACACTAA-
1 TTCTTCACAATCGGGGATACTCCAACTCCGATTTTATTTCCAAAAACACCAAT
* *
2731922 TT-TTCTATAATCGGGGATACTCTAACTCCGATTTTATTTCCAAAAAACACCAAT
1 TTCTTC-ACAATCGGGGATACTCCAACTCCGATTTTATTTCC-AAAAACACCAAT
* * * *** * *
2731976 TTCTTCACAATCGGGGATACTCCAACCCCG--TTAATCATCGGGGATACTCCAACCCCGT
1 TTCTTCACAATCGGGGATACTCCAACTCCGATTTTAT-TTC-CAAAAACACCAA-----T
* * * *
2732034 TAT-TTC-CGA--GGGGATACTCCAACCCCGATTTTA--TCGCTAAAACACTAAT
1 T-TCTTCACAATCGGGGATACTCCAACTCCGATTTTATTTC-CAAAAACACCAAT
* * *
2732083 TT-TTCCACAATCGGGGATACTCCAA-TCCCGGTTTTATTTTC-AAAACGCCAATT
1 TTCTT-CACAATCGGGGATACTCCAACT-CCGATTTTATTTCCAAAAACACCAA-T
* * * * * *
2732136 TTCCTT--TAATCGAGTATACTCTAACTCCGATTTTATTTCTAAAAATACCAAT
1 TT-CTTCACAATCGGGGATACTCCAACTCCGATTTTATTTCCAAAAACACCAAT
*
2732188 TT-TTCACAATCGAGGATACTCCAAC
1 TTCTTCACAATCGGGGATACTCCAAC
2732213 CTCGTTATTT
Statistics
Matches: 220, Mismatches: 42, Indels: 57
0.69 0.13 0.18
Matches are distributed among these distances:
48 3 0.01
49 3 0.01
50 6 0.03
51 33 0.15
52 77 0.35
53 31 0.14
54 33 0.15
55 23 0.10
57 5 0.02
58 5 0.02
59 1 0.00
ACGTcount: A:0.30, C:0.26, G:0.12, T:0.32
Consensus pattern (53 bp):
TTCTTCACAATCGGGGATACTCCAACTCCGATTTTATTTCCAAAAACACCAAT
Found at i:2732015 original size:27 final size:28
Alignment explanation
Indices: 2731985--2732060 Score: 109
Period size: 27 Copynumber: 2.8 Consensus size: 28
2731975 TTTCTTCACA
2731985 ATCGGGGATACTCCAACCCCGTTA-ATC
1 ATCGGGGATACTCCAACCCCGTTATATC
*
2732012 ATCGGGGATACTCCAACCCCGTTATTTC
1 ATCGGGGATACTCCAACCCCGTTATATC
***
2732040 CGAGGGGATACTCCAACCCCG
1 ATCGGGGATACTCCAACCCCG
2732061 ATTTTATCGC
Statistics
Matches: 44, Mismatches: 4, Indels: 1
0.90 0.08 0.02
Matches are distributed among these distances:
27 24 0.55
28 20 0.45
ACGTcount: A:0.24, C:0.34, G:0.21, T:0.21
Consensus pattern (28 bp):
ATCGGGGATACTCCAACCCCGTTATATC
Found at i:2732196 original size:104 final size:103
Alignment explanation
Indices: 2731876--2732213 Score: 299
Period size: 104 Copynumber: 3.2 Consensus size: 103
2731866 CTCAATTCTC
* * * * *
2731876 CACAATCGGGGATATTCCAACTCCGATTTTATTTTCAAAACACTAATTTT-CTATAATCGGGGAT
1 CACAATCGGGGATACTCCAAC-CCGGTTTTATTTTCAAAACACCAATTTTCCTTTAATCGAGGAT
*
2731940 ACTCTAACTCCGATTTTATTTCCAAAAAACACCAATTTCTT
65 ACTCTAACTCCGATTTTATTT-CTAAAAACACCAATTT-TT
* * ** * * * ** * *
2731981 CACAATCGGGGATACTCCAACCCCG-TTAATCATCGGGGATACTCCAA--CCCCGTTATTTCCGA
1 CACAATCGGGGATACTCCAACCCGGTTTTATTTTC---AAAACACCAATTTTCCTTTA-AT-CGA
* * ** *
2732043 GGGGATACTCCAACCCCGATTTTATCGCT-AAAACACTAATTTTT
61 --GGATACTCTAACTCCGATTTTATTTCTAAAAACACCAATTTTT
* *
2732087 CCACAATCGGGGATACTCCAATCCCGGTTTTATTTTCAAAACGCCAATTTTCCTTTAATCGAGTA
1 -CACAATCGGGGATACTCCAA-CCCGGTTTTATTTTCAAAACACCAATTTTCCTTTAATCGAGGA
*
2732152 TACTCTAACTCCGATTTTATTTCTAAAAATACCAATTTTT
64 TACTCTAACTCCGATTTTATTTCTAAAAACACCAATTTTT
*
2732192 CACAATCGAGGATACTCCAACC
1 CACAATCGGGGATACTCCAACC
2732214 TCGTTATTTC
Statistics
Matches: 178, Mismatches: 41, Indels: 30
0.71 0.16 0.12
Matches are distributed among these distances:
103 8 0.04
104 43 0.24
105 36 0.20
106 19 0.11
107 35 0.20
108 10 0.06
109 27 0.15
ACGTcount: A:0.30, C:0.26, G:0.12, T:0.32
Consensus pattern (103 bp):
CACAATCGGGGATACTCCAACCCGGTTTTATTTTCAAAACACCAATTTTCCTTTAATCGAGGATA
CTCTAACTCCGATTTTATTTCTAAAAACACCAATTTTT
Found at i:2732232 original size:28 final size:30
Alignment explanation
Indices: 2732196--2732272 Score: 99
Period size: 28 Copynumber: 2.7 Consensus size: 30
2732186 ATTTTTCACA
* *
2732196 ATCGAGGATACTCCAACCTCGTTA-TTTC-
1 ATCGGGGATACTCCAACCCCGTTACTTTCG
2732224 ATCGGGGATACTCCAACCCCGTTACTTTCG
1 ATCGGGGATACTCCAACCCCGTTACTTTCG
*
2732254 A--GGGGATACTCCAATCCCG
1 ATCGGGGATACTCCAACCCCG
2732273 ATTTTTTTTC
Statistics
Matches: 44, Mismatches: 3, Indels: 4
0.86 0.06 0.08
Matches are distributed among these distances:
28 39 0.89
29 4 0.09
30 1 0.02
ACGTcount: A:0.23, C:0.31, G:0.19, T:0.26
Consensus pattern (30 bp):
ATCGGGGATACTCCAACCCCGTTACTTTCG
Found at i:2732241 original size:212 final size:212
Alignment explanation
Indices: 2731874--2732277 Score: 627
Period size: 212 Copynumber: 1.9 Consensus size: 212
2731864 TTCTCAATTC
* * *
2731874 TCCACAATCGGGGATATTCCAACTCCGATTTTATTTTCAAAACACTAATTTTCTATAATCGGGGA
1 TCCACAATCGGGGATACTCCAACTCCGATTTTATTTTCAAAACACCAATTTTCTATAATCGAGGA
*
2731939 TACTCTAACTCCGATTTTATTTCCAAAAAACACCAATTTCTTCACAATCGGGGATACTCCAACCC
66 TACTCTAACTCCGATTTTATTTCCAAAAAACACCAATTTCTTCACAATCGAGGATACTCCAACCC
2732004 CGTTAATCATCGGGGATACTCCAACCCCGTTA-TTTCCGAGGGGATACTCCAACCCCGATTTTAT
131 CGTTAATCATCGGGGATACTCCAACCCCGTTACTTT-CGAGGGGATACTCCAACCCCGATTTTAT
2732068 CGCTAAAACACTAATTTT
195 CGCTAAAACACTAATTTT
* * *
2732086 TCCACAATCGGGGATACTCCAA-TCCCGGTTTTATTTTCAAAACGCCAATTTTCCTTTAATCGAG
1 TCCACAATCGGGGATACTCCAACT-CCGATTTTATTTTCAAAACACCAATTTT-CTATAATCGAG
* * *
2732150 TATACTCTAACTCCGATTTTATTT-CTAAAAATACCAATTT-TTCACAATCGAGGATACTCCAAC
64 GATACTCTAACTCCGATTTTATTTCCAAAAAACACCAATTTCTTCACAATCGAGGATACTCCAAC
* * *
2732213 CTCGTTATTTCATCGGGGATACTCCAACCCCGTTACTTTCGAGGGGATACTCCAATCCCGATTTT
129 CCCGTTA-ATCATCGGGGATACTCCAACCCCGTTACTTTCGAGGGGATACTCCAACCCCGATTTT
2732278 TTTTCTTCTG
Statistics
Matches: 175, Mismatches: 13, Indels: 8
0.89 0.07 0.04
Matches are distributed among these distances:
211 29 0.17
212 111 0.63
213 35 0.20
ACGTcount: A:0.28, C:0.27, G:0.13, T:0.32
Consensus pattern (212 bp):
TCCACAATCGGGGATACTCCAACTCCGATTTTATTTTCAAAACACCAATTTTCTATAATCGAGGA
TACTCTAACTCCGATTTTATTTCCAAAAAACACCAATTTCTTCACAATCGAGGATACTCCAACCC
CGTTAATCATCGGGGATACTCCAACCCCGTTACTTTCGAGGGGATACTCCAACCCCGATTTTATC
GCTAAAACACTAATTTT
Found at i:2734046 original size:20 final size:22
Alignment explanation
Indices: 2734021--2734065 Score: 67
Period size: 20 Copynumber: 2.1 Consensus size: 22
2734011 GCAGCACTCA
*
2734021 CCAGGTCGCGACC-GGC-ACCC
1 CCAGGTCGCAACCAGGCAACCC
2734041 CCAGGTCGCAACCAGGCAACCC
1 CCAGGTCGCAACCAGGCAACCC
2734063 CCA
1 CCA
2734066 TACTCACGAC
Statistics
Matches: 22, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
20 12 0.55
21 3 0.14
22 7 0.32
ACGTcount: A:0.22, C:0.49, G:0.24, T:0.04
Consensus pattern (22 bp):
CCAGGTCGCAACCAGGCAACCC
Found at i:2736909 original size:21 final size:22
Alignment explanation
Indices: 2736869--2736911 Score: 61
Period size: 21 Copynumber: 2.0 Consensus size: 22
2736859 GATGATTTTG
* *
2736869 ATGAAAAATAAAGTATTTTGAA
1 ATGAAAAATAAAGAAATTTGAA
2736891 ATGAAAAAT-AAGAAATTTGAA
1 ATGAAAAATAAAGAAATTTGAA
2736912 GAAGATTTGA
Statistics
Matches: 19, Mismatches: 2, Indels: 1
0.86 0.09 0.05
Matches are distributed among these distances:
21 10 0.53
22 9 0.47
ACGTcount: A:0.58, C:0.00, G:0.14, T:0.28
Consensus pattern (22 bp):
ATGAAAAATAAAGAAATTTGAA
Found at i:2746702 original size:20 final size:20
Alignment explanation
Indices: 2746677--2746730 Score: 67
Period size: 20 Copynumber: 2.7 Consensus size: 20
2746667 GTTTGAAGCA
2746677 ATGTATCGATACAAT-T-CATC
1 ATGTATCGATACAATGTGC--C
*
2746697 ATGTATCAATACAATGTGCC
1 ATGTATCGATACAATGTGCC
2746717 ATGTATCGATACAA
1 ATGTATCGATACAA
2746731 ACAATGGTAG
Statistics
Matches: 30, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
20 28 0.93
21 1 0.03
22 1 0.03
ACGTcount: A:0.37, C:0.19, G:0.13, T:0.31
Consensus pattern (20 bp):
ATGTATCGATACAATGTGCC
Found at i:2746803 original size:19 final size:19
Alignment explanation
Indices: 2746759--2746831 Score: 85
Period size: 20 Copynumber: 3.7 Consensus size: 19
2746749 CTGCCAGTTT
**
2746759 CATGTATCGATACAATTGTC
1 CATGTATCGATACAA-TGAA
2746779 CATGTATCGATACAATGAA
1 CATGTATCGATACAATGAA
*
2746798 CATGTATCGATACAAAGCATA
1 CATGTATCGATACAATG-A-A
2746819 -ATGTATCGATACA
1 CATGTATCGATACA
2746832 TCTGGGTAGG
Statistics
Matches: 48, Mismatches: 3, Indels: 4
0.87 0.05 0.07
Matches are distributed among these distances:
19 18 0.38
20 29 0.60
21 1 0.02
ACGTcount: A:0.38, C:0.18, G:0.15, T:0.29
Consensus pattern (19 bp):
CATGTATCGATACAATGAA
Found at i:2749766 original size:35 final size:35
Alignment explanation
Indices: 2749685--2749811 Score: 149
Period size: 35 Copynumber: 3.8 Consensus size: 35
2749675 CTTTGCAAGA
* *
2749685 CTATC-TTTTGAAA-GCTAAGATAG-A-AT-GTCC
1 CTATCTTTTTCAAAGGCTAAGATAGAACATCCTCC
* *
2749715 CTATC-TTTTCACAGGCTAAGATAGAACATCTTCC
1 CTATCTTTTTCAAAGGCTAAGATAGAACATCCTCC
* * *
2749749 TTATCTTTTTCAAAGGCTAAAATAGAACTTCCTCC
1 CTATCTTTTTCAAAGGCTAAGATAGAACATCCTCC
2749784 CTATCTTTTTCAAAGGCTAAGATAGAAC
1 CTATCTTTTTCAAAGGCTAAGATAGAAC
2749812 CTCTCAATCA
Statistics
Matches: 82, Mismatches: 10, Indels: 5
0.85 0.10 0.05
Matches are distributed among these distances:
30 11 0.13
31 10 0.12
32 1 0.01
33 2 0.02
34 7 0.09
35 51 0.62
ACGTcount: A:0.32, C:0.21, G:0.13, T:0.34
Consensus pattern (35 bp):
CTATCTTTTTCAAAGGCTAAGATAGAACATCCTCC
Found at i:2750355 original size:19 final size:20
Alignment explanation
Indices: 2750332--2750383 Score: 70
Period size: 19 Copynumber: 2.6 Consensus size: 20
2750322 GTAGCCAAAC
**
2750332 TTGTATCGATACACCAAGTA
1 TTGTATCGATACACCAAAAA
*
2750352 -TGTATCGAAACACCAAAAA
1 TTGTATCGATACACCAAAAA
2750371 TTGTATCGATACA
1 TTGTATCGATACA
2750384 TTGGCTTGTA
Statistics
Matches: 27, Mismatches: 4, Indels: 2
0.82 0.12 0.06
Matches are distributed among these distances:
19 16 0.59
20 11 0.41
ACGTcount: A:0.40, C:0.19, G:0.13, T:0.27
Consensus pattern (20 bp):
TTGTATCGATACACCAAAAA
Found at i:2756571 original size:13 final size:13
Alignment explanation
Indices: 2756553--2756592 Score: 71
Period size: 13 Copynumber: 3.1 Consensus size: 13
2756543 ACATTTTTCT
2756553 TTGTATCGATACA
1 TTGTATCGATACA
2756566 TTGTATCGATACA
1 TTGTATCGATACA
*
2756579 CTGTATCGATACA
1 TTGTATCGATACA
2756592 T
1 T
2756593 GGGGATTATA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
13 25 1.00
ACGTcount: A:0.30, C:0.17, G:0.15, T:0.38
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:2756755 original size:20 final size:20
Alignment explanation
Indices: 2756712--2756757 Score: 58
Period size: 21 Copynumber: 2.2 Consensus size: 20
2756702 AAATCTTTTG
2756712 CAAAATACTTGTTTTTCACTT
1 CAAAATACTTGTTTTTCAC-T
*
2756733 CAAATTACTTCGTTTTTCA-T
1 CAAAATACTT-GTTTTTCACT
2756753 CAAAA
1 CAAAA
2756758 CTAGCATCAA
Statistics
Matches: 22, Mismatches: 2, Indels: 3
0.81 0.07 0.11
Matches are distributed among these distances:
20 5 0.23
21 9 0.41
22 8 0.36
ACGTcount: A:0.33, C:0.20, G:0.04, T:0.43
Consensus pattern (20 bp):
CAAAATACTTGTTTTTCACT
Found at i:2759090 original size:20 final size:20
Alignment explanation
Indices: 2759036--2759090 Score: 76
Period size: 20 Copynumber: 2.8 Consensus size: 20
2759026 AAAACCCTTA
*
2759036 AAAGTATCGATACACGATTC
1 AAAGTATCGATACATGATTC
2759056 AAAGTATCGATACATG-TTGC
1 AAAGTATCGATACATGATT-C
*
2759076 AATGTATCGATACAT
1 AAAGTATCGATACAT
2759091 CAAAAATATG
Statistics
Matches: 32, Mismatches: 2, Indels: 2
0.89 0.06 0.06
Matches are distributed among these distances:
19 2 0.06
20 30 0.94
ACGTcount: A:0.38, C:0.16, G:0.16, T:0.29
Consensus pattern (20 bp):
AAAGTATCGATACATGATTC
Found at i:2759179 original size:13 final size:13
Alignment explanation
Indices: 2759161--2759186 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
2759151 TACACCAAGT
2759161 ATGTATCGATACA
1 ATGTATCGATACA
2759174 ATGTATCGATACA
1 ATGTATCGATACA
2759187 CCAAAAATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:2759186 original size:32 final size:33
Alignment explanation
Indices: 2759145--2759206 Score: 99
Period size: 32 Copynumber: 1.9 Consensus size: 33
2759135 GCGAAACTTT
**
2759145 TATCGATACACCAAGTA-TGTATCGATACAATG
1 TATCGATACACCAAAAATTGTATCGATACAATG
2759177 TATCGATACACCAAAAATTGTATCGATACA
1 TATCGATACACCAAAAATTGTATCGATACA
2759207 TTGGCTTGTA
Statistics
Matches: 27, Mismatches: 2, Indels: 1
0.90 0.07 0.03
Matches are distributed among these distances:
32 15 0.56
33 12 0.44
ACGTcount: A:0.40, C:0.19, G:0.13, T:0.27
Consensus pattern (33 bp):
TATCGATACACCAAAAATTGTATCGATACAATG
Found at i:2761183 original size:87 final size:87
Alignment explanation
Indices: 2761090--2761263 Score: 296
Period size: 87 Copynumber: 2.0 Consensus size: 87
2761080 CTTTTTTTAG
* *
2761090 AAAGCAATTTTATATAAATTCTCTAATTTCTCCTATTATAACACTTCTCAATTTCTCAATTTTAA
1 AAAGCAATTTTATACAAATTCTCCAATTTCTCCTATTATAACACTTCTCAATTTCTCAATTTTAA
*
2761155 ATGTTC-TCCCGCTATGTGTTAT
66 ACGTTCTTCCC-CTATGTGTTAT
*
2761177 AAAGCAATTTTATACAAATTCTCCAATTTCTCCTATTATAACACTTCTCTATTTCTCAATTTTAA
1 AAAGCAATTTTATACAAATTCTCCAATTTCTCCTATTATAACACTTCTCAATTTCTCAATTTTAA
2761242 ACGTTCTTCCCCTATGTGTTAT
66 ACGTTCTTCCCCTATGTGTTAT
2761264 GAGCCAACAA
Statistics
Matches: 82, Mismatches: 4, Indels: 2
0.93 0.05 0.02
Matches are distributed among these distances:
87 78 0.95
88 4 0.05
ACGTcount: A:0.29, C:0.21, G:0.05, T:0.44
Consensus pattern (87 bp):
AAAGCAATTTTATACAAATTCTCCAATTTCTCCTATTATAACACTTCTCAATTTCTCAATTTTAA
ACGTTCTTCCCCTATGTGTTAT
Found at i:2762971 original size:10 final size:10
Alignment explanation
Indices: 2762956--2762981 Score: 52
Period size: 10 Copynumber: 2.6 Consensus size: 10
2762946 TTTAGAAAGA
2762956 GAATTTGATG
1 GAATTTGATG
2762966 GAATTTGATG
1 GAATTTGATG
2762976 GAATTT
1 GAATTT
2762982 TGTTGATGAA
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
10 16 1.00
ACGTcount: A:0.31, C:0.00, G:0.27, T:0.42
Consensus pattern (10 bp):
GAATTTGATG
Found at i:2766218 original size:20 final size:20
Alignment explanation
Indices: 2766193--2766244 Score: 79
Period size: 19 Copynumber: 2.6 Consensus size: 20
2766183 TACAAGCCAA
**
2766193 TGTATCGATACAATTTTTTG
1 TGTATCGATACAATACTTTG
2766213 TGTATCGATAC-ATACTTTG
1 TGTATCGATACAATACTTTG
2766232 TGTATCGATACAA
1 TGTATCGATACAA
2766245 GTTTGGCTAC
Statistics
Matches: 29, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
19 17 0.59
20 12 0.41
ACGTcount: A:0.29, C:0.13, G:0.15, T:0.42
Consensus pattern (20 bp):
TGTATCGATACAATACTTTG
Found at i:2766320 original size:20 final size:20
Alignment explanation
Indices: 2766274--2766347 Score: 78
Period size: 20 Copynumber: 3.6 Consensus size: 20
2766264 ATCCCAATGA
***
2766274 CATGTATCGATACATCTTTTT
1 CATGTATCGATACAT-TGAAT
2766295 CATGTATCGATACATTGCAA-
1 CATGTATCGATACATTG-AAT
*
2766315 CATGTATCGATACTTTGAAT
1 CATGTATCGATACATTGAAT
*
2766335 CGTGTATCGATAC
1 CATGTATCGATAC
2766348 TTTTAAGGGT
Statistics
Matches: 46, Mismatches: 5, Indels: 5
0.82 0.09 0.09
Matches are distributed among these distances:
19 2 0.04
20 29 0.63
21 15 0.33
ACGTcount: A:0.28, C:0.19, G:0.15, T:0.38
Consensus pattern (20 bp):
CATGTATCGATACATTGAAT
Found at i:2766813 original size:16 final size:16
Alignment explanation
Indices: 2766792--2766823 Score: 64
Period size: 16 Copynumber: 2.0 Consensus size: 16
2766782 GAAAATTAAA
2766792 ACTTTGAAACAAGTGT
1 ACTTTGAAACAAGTGT
2766808 ACTTTGAAACAAGTGT
1 ACTTTGAAACAAGTGT
2766824 GATAAAAACA
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 16 1.00
ACGTcount: A:0.38, C:0.12, G:0.19, T:0.31
Consensus pattern (16 bp):
ACTTTGAAACAAGTGT
Found at i:2767038 original size:30 final size:31
Alignment explanation
Indices: 2767004--2767061 Score: 82
Period size: 31 Copynumber: 1.9 Consensus size: 31
2766994 TCTTACAATA
*
2767004 CTATCTTTTGA-AGGCTAAGATAAAACCCCT
1 CTATCTTTTCATAGGCTAAGATAAAACCCCT
* *
2767034 CTATCTTTTCATAGTCTAAGATAGAACC
1 CTATCTTTTCATAGGCTAAGATAAAACC
2767062 TCTTCCCTAT
Statistics
Matches: 24, Mismatches: 3, Indels: 1
0.86 0.11 0.04
Matches are distributed among these distances:
30 10 0.42
31 14 0.58
ACGTcount: A:0.33, C:0.22, G:0.12, T:0.33
Consensus pattern (31 bp):
CTATCTTTTCATAGGCTAAGATAAAACCCCT
Found at i:2767678 original size:20 final size:20
Alignment explanation
Indices: 2767655--2767704 Score: 66
Period size: 20 Copynumber: 2.5 Consensus size: 20
2767645 TAATTCATGG
2767655 TGTATCGATAC-AAAGCAATT
1 TGTATCGATACTAAA-CAATT
* *
2767675 TGTATTGATACTTAACAATT
1 TGTATCGATACTAAACAATT
2767695 TGTATCGATA
1 TGTATCGATA
2767705 TAATATATCG
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
20 24 0.92
21 2 0.08
ACGTcount: A:0.36, C:0.12, G:0.14, T:0.38
Consensus pattern (20 bp):
TGTATCGATACTAAACAATT
Found at i:2770420 original size:22 final size:21
Alignment explanation
Indices: 2770383--2770447 Score: 80
Period size: 21 Copynumber: 3.1 Consensus size: 21
2770373 TATATTAAAA
*
2770383 ATAAAAATTT-AATTAAATTT
1 ATAAATATTTAAATTAAATTT
2770403 ATAAATCATTTAAATTAAATATT
1 ATAAAT-ATTTAAATTAAAT-TT
*
2770426 A-AAATATTTAAATTTAATTT
1 ATAAATATTTAAATTAAATTT
2770446 AT
1 AT
2770448 TACTTAATTT
Statistics
Matches: 39, Mismatches: 2, Indels: 7
0.81 0.04 0.15
Matches are distributed among these distances:
20 8 0.21
21 16 0.41
22 12 0.31
23 3 0.08
ACGTcount: A:0.52, C:0.02, G:0.00, T:0.46
Consensus pattern (21 bp):
ATAAATATTTAAATTAAATTT
Found at i:2770540 original size:2 final size:2
Alignment explanation
Indices: 2770533--2770562 Score: 51
Period size: 2 Copynumber: 15.0 Consensus size: 2
2770523 AAATACCAAC
*
2770533 AT AT AT AT AT AT AT AT AT AT AT AC AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
2770563 TTTATGGTGG
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
2 26 1.00
ACGTcount: A:0.50, C:0.03, G:0.00, T:0.47
Consensus pattern (2 bp):
AT
Found at i:2772103 original size:22 final size:22
Alignment explanation
Indices: 2772062--2772103 Score: 63
Period size: 21 Copynumber: 2.0 Consensus size: 22
2772052 TATTTTTGTT
2772062 TAAAT-TTAATTATAAAATATA
1 TAAATATTAATTATAAAATATA
2772083 TAAATATT-ATTATAAAA-ATA
1 TAAATATTAATTATAAAATATA
2772103 T
1 T
2772104 TTTAATATTT
Statistics
Matches: 20, Mismatches: 0, Indels: 3
0.87 0.00 0.13
Matches are distributed among these distances:
20 4 0.20
21 14 0.70
22 2 0.10
ACGTcount: A:0.57, C:0.00, G:0.00, T:0.43
Consensus pattern (22 bp):
TAAATATTAATTATAAAATATA
Found at i:2778687 original size:98 final size:98
Alignment explanation
Indices: 2778585--2778781 Score: 304
Period size: 98 Copynumber: 2.0 Consensus size: 98
2778575 CAAAAAAAAG
* * * *
2778585 TGTTCTAGTGTTATAACCCTTTTTCATTTTAAAAAAAATTATTATTAGAGCTTCATTTTAATATT
1 TGTTCTAGTGTTATAACCCTTTTCCATCTTAAAAAAAATTATTATTAGAGCTTCATTGTAATATC
*
2778650 TTACAAATATTTCTTTGTTCCTCATCATTGATT
66 TTACAAAGATTTCTTTGTTCCTCATCATTGATT
* *
2778683 TGTTCTAGTGTTATAACCCTTTTCCATCTTAAATAAAATTGTTATTAGAGCTTCATTGTAATATC
1 TGTTCTAGTGTTATAACCCTTTTCCATCTTAAAAAAAATTATTATTAGAGCTTCATTGTAATATC
* * *
2778748 TTACAAAGATTTTTTTGTTCTTCTTCATTGATT
66 TTACAAAGATTTCTTTGTTCCTCATCATTGATT
2778781 T
1 T
2778782 CTCTTCCTTT
Statistics
Matches: 89, Mismatches: 10, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
98 89 1.00
ACGTcount: A:0.28, C:0.14, G:0.09, T:0.50
Consensus pattern (98 bp):
TGTTCTAGTGTTATAACCCTTTTCCATCTTAAAAAAAATTATTATTAGAGCTTCATTGTAATATC
TTACAAAGATTTCTTTGTTCCTCATCATTGATT
Found at i:2778807 original size:28 final size:28
Alignment explanation
Indices: 2778776--2778856 Score: 85
Period size: 28 Copynumber: 2.9 Consensus size: 28
2778766 TCTTCTTCAT
2778776 TGATTTCTCTTCCTTTGATATTTCTTGC
1 TGATTTCTCTTCCTTTGATATTTCTTGC
* * **
2778804 TGATTTCAT-TTCCTTTCATAATTCTTTT
1 TGATTTC-TCTTCCTTTGATATTTCTTGC
* *
2778832 TGATTTCACTT-CTTTGATTTTTCTT
1 TGATTTCTCTTCCTTTGATATTTCTT
2778857 ATTTATTAAT
Statistics
Matches: 43, Mismatches: 8, Indels: 5
0.77 0.14 0.09
Matches are distributed among these distances:
27 11 0.26
28 31 0.72
29 1 0.02
ACGTcount: A:0.14, C:0.19, G:0.07, T:0.60
Consensus pattern (28 bp):
TGATTTCTCTTCCTTTGATATTTCTTGC
Found at i:2780350 original size:28 final size:27
Alignment explanation
Indices: 2780319--2780397 Score: 70
Period size: 28 Copynumber: 2.9 Consensus size: 27
2780309 TTATTTATTG
2780319 ATTTCTCTTCCTTTGATATTTCTTGCTA
1 ATTTCTCTTCC-TTGATATTTCTTGCTA
* * * *
2780347 ATTT-TGTTTCCCTTCATATTTCTTGTTG
1 ATTTCT-CTT-CCTTGATATTTCTTGCTA
* *
2780375 ATTTCACTTCCTTGATCTTTCTT
1 ATTTCTCTTCCTTGATATTTCTT
2780398 ATGTATTAAT
Statistics
Matches: 40, Mismatches: 8, Indels: 7
0.73 0.15 0.13
Matches are distributed among these distances:
27 13 0.32
28 25 0.62
29 2 0.05
ACGTcount: A:0.13, C:0.22, G:0.08, T:0.58
Consensus pattern (27 bp):
ATTTCTCTTCCTTGATATTTCTTGCTA
Found at i:2783450 original size:28 final size:28
Alignment explanation
Indices: 2783387--2783451 Score: 76
Period size: 28 Copynumber: 2.3 Consensus size: 28
2783377 GTTTCTCTAC
** *
2783387 ATTGATTTCTTTTCCTTTGATATTTCTT
1 ATTGATTTCGCTTCCTTTCATATTTCTT
** *
2783415 GCTAATTTCGCTTCCTTTCATATTTCTT
1 ATTGATTTCGCTTCCTTTCATATTTCTT
2783443 ATTGATTTC
1 ATTGATTTC
2783452 ACTTTCTTGT
Statistics
Matches: 28, Mismatches: 9, Indels: 0
0.76 0.24 0.00
Matches are distributed among these distances:
28 28 1.00
ACGTcount: A:0.15, C:0.18, G:0.08, T:0.58
Consensus pattern (28 bp):
ATTGATTTCGCTTCCTTTCATATTTCTT
Found at i:2784327 original size:81 final size:80
Alignment explanation
Indices: 2784182--2784335 Score: 188
Period size: 81 Copynumber: 1.9 Consensus size: 80
2784172 TAACTTTTAA
* *
2784182 ATTTTAATTTATTTAGATAATTCCTAATCAAATTATGATAAGGAGTAGACTTTATCCTTATTGAT
1 ATTTTAAGTTATTTAGATAATTCCTAATCAAATTAGGATAAGGAGTAGACTTTATCCTTATTGA-
*
2784247 TAGGATTATGTTTAGG
65 TAAGATTATGTTTAGG
* * * *
2784263 ATTTTAAGTTGTTTAGATAAGTT-TTAATCAAATTAGGATAAGGAATTA-ACTTT-TCTTTATTT
1 ATTTTAAGTTATTTAGATAA-TTCCTAATCAAATTAGGATAAGG-AGTAGACTTTATCCTTA-TT
2784325 GATAAGATTAT
63 GATAAGATTAT
2784336 CCTTGTTTAA
Statistics
Matches: 63, Mismatches: 7, Indels: 7
0.82 0.09 0.09
Matches are distributed among these distances:
80 13 0.21
81 45 0.71
82 5 0.08
ACGTcount: A:0.34, C:0.06, G:0.14, T:0.45
Consensus pattern (80 bp):
ATTTTAAGTTATTTAGATAATTCCTAATCAAATTAGGATAAGGAGTAGACTTTATCCTTATTGAT
AAGATTATGTTTAGG
Found at i:2785142 original size:13 final size:13
Alignment explanation
Indices: 2785124--2785150 Score: 54
Period size: 13 Copynumber: 2.1 Consensus size: 13
2785114 ACATCTTGCT
2785124 TTGTATCGATACA
1 TTGTATCGATACA
2785137 TTGTATCGATACA
1 TTGTATCGATACA
2785150 T
1 T
2785151 GCTCATTGTA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 14 1.00
ACGTcount: A:0.30, C:0.15, G:0.15, T:0.41
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:2785180 original size:20 final size:19
Alignment explanation
Indices: 2785134--2785190 Score: 78
Period size: 19 Copynumber: 2.9 Consensus size: 19
2785124 TTGTATCGAT
2785134 ACATTGTATCGATACATGC
1 ACATTGTATCGATACATGC
* * *
2785153 TCATTGTATCAATACATGG
1 ACATTGTATCGATACATGC
2785172 ACAATTGTATCGATACATG
1 AC-ATTGTATCGATACATG
2785191 AAACTGGCAG
Statistics
Matches: 32, Mismatches: 5, Indels: 1
0.84 0.13 0.03
Matches are distributed among these distances:
19 17 0.53
20 15 0.47
ACGTcount: A:0.33, C:0.18, G:0.16, T:0.33
Consensus pattern (19 bp):
ACATTGTATCGATACATGC
Found at i:2785264 original size:33 final size:33
Alignment explanation
Indices: 2785222--2785287 Score: 98
Period size: 33 Copynumber: 2.0 Consensus size: 33
2785212 TCACTATTTT
* *
2785222 TATCGATACATGGT-ACAATGTATCGATATATTG
1 TATCGATACATGATGA-AATGTATCGATACATTG
2785255 TATCGATACATGATGAAATGTATCGATACATTG
1 TATCGATACATGATGAAATGTATCGATACATTG
2785288 CTTGTAATGG
Statistics
Matches: 30, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
33 29 0.97
34 1 0.03
ACGTcount: A:0.35, C:0.12, G:0.18, T:0.35
Consensus pattern (33 bp):
TATCGATACATGATGAAATGTATCGATACATTG
Found at i:2789118 original size:140 final size:141
Alignment explanation
Indices: 2788847--2789717 Score: 649
Period size: 140 Copynumber: 6.3 Consensus size: 141
2788837 ATCATCGTTG
* * * * * * * *
2788847 AACTATATTGGTGTTAGACCTAGTCAAACTTTTTTTTACCTTGTTTGACTGTATTAGCGTTAGAC
1 AACTGTATTGGCGTTAGGCCTGGTCAAACTCTTTTTCACCTTGTTTGACTGTATTGGCATTAGAC
* ** * * * * * * *
2788912 ATGGCCAAACTCTCTCTTTCATTCTTGTTTGACTGTATTGGCGTTAGGACCTA-ATCAAGCTTTT
66 CTGGTTAAACTCTCTCTTTCACTCTCGTTTGACTGTATTGGCATTAAGACCTAGGTCAAACTCTT
2788976 TTCTCTCATTT
131 TTCTCTCATTT
* * *
2788987 AACTGTATTAGCGTTAGGCTTGGTCAAACTCTTTTTCACCTTGTTTGACTATATTGGCATTAGAC
1 AACTGTATTGGCGTTAGGCCTGGTCAAACTCTTTTTCACCTTGTTTGACTGTATTGGCATTAGAC
* * *
2789052 CTAGTTAAACTCTCTCTTTCACTCTCGTTTAACGGTATTGGCATTAAGACCTAGG-CAAACTCTT
66 CTGGTTAAACTCTCTCTTTCACTCTCGTTTGACTGTATTGGCATTAAGACCTAGGTCAAACTCTT
2789116 TTCTCTCATTT
131 TTCTCTCATTT
* * * * *
2789127 GACTGTATTGGCGTTAGACCTGGTCAAACTTTTTTTTCATCTTGTTTGACTGTATTGGCGTTAGG
1 AACTGTATTGGCGTTAGGCCTGGTCAAAC-TCTTTTTCACCTTGTTTGACTGTATTGGCATTA-G
* * *
2789192 ACCTGGTTAAACT-T-TCTTTCACTCTCGTTTGGCTGTATT-G-ATGTTAGA-CTTGGTCAAACT
64 ACCTGGTTAAACTCTCTCTTTCACTCTCGTTTGACTGTATTGGCAT-TAAGACCTAGGTCAAACT
* *
2789252 CTCTTTCACTCTTGTCT
128 CT-TTTCTCTCAT-T-T
*
2789269 AGCTGTATTGGCGTTAGGACCTGGTCAAACTC-TTTTCACCATTGTTTGACTGTATTGGCATTAG
1 AACTGTATTGGCGTTAGG-CCTGGTCAAACTCTTTTTCACC-TTGTTTGACTGTATTGGCATTA-
* ** * *
2789333 GACCTGGTTAAACTCTC-C--TCAC-CTTGTTTGACTGTATTGGTGTT-AGTCCT-GGTCAAAAT
63 GACCTGGTTAAACTCTCTCTTTCACTCTCGTTTGACTGTATTGGCATTAAGACCTAGGTCAAACT
* *
2789392 CTTTTCTTTCGTTT
128 CTTTTCTCTCATTT
* * ** * * *
2789406 GACTGTATTGGCATTATTCTTGGTCAAACTC-TTTTC-TCTTGTTTAACTGTATTGGCATTA-AT
1 AACTGTATTGGCGTTAGGCCTGGTCAAACTCTTTTTCACCTTGTTTGACTGTATTGGCATTAGA-
* * * ** * ** *
2789468 CCTAGTCAAACTCTTTCTACCA-T-T-GTTTGACTGTATCGGTGTTAGGACCTA-GTCAAACTCT
65 CCTGGTTAAACTCTCTCTTTCACTCTCGTTTGACTGTATTGGCATTAAGACCTAGGTCAAACTCT
*
2789529 TTTCAC-CATTTGTTT
130 TTTCTCTCA----TTT
* * * * * * * * * *
2789544 GACTGTATTGGCATTAGTCCTAGTCAAAATC-TTTT-ATCTCGTTTAACTGTATTGGCACTAGTC
1 AACTGTATTGGCGTTAGGCCTGGTCAAACTCTTTTTCACCTTGTTTGACTGTATTGGCATTAGAC
* * * * *
2789607 CTGATCAAA--CTCT-TTT--CTCTCGTTTGACTATATTGGCATT-AGTCCT-GGTTAAACTCTT
66 CTGGTTAAACTCTCTCTTTCACTCTCGTTTGACTGTATTGGCATTAAGACCTAGGTCAAACTCTT
2789665 TT-TAC-CATTGTTT
131 TTCT-CTCA---TTT
* *
2789678 GACCGTATTGGCGTTAGGACCTGGTCAAACT-TTTTTCACC
1 AACTGTATTGGCGTTAGG-CCTGGTCAAACTCTTTTTCACC
2789718 ATTTGTGACC
Statistics
Matches: 596, Mismatches: 99, Indels: 76
0.77 0.13 0.10
Matches are distributed among these distances:
132 1 0.00
133 12 0.02
134 63 0.11
135 54 0.09
136 39 0.07
137 14 0.02
138 71 0.12
139 20 0.03
140 196 0.33
141 46 0.08
142 67 0.11
143 13 0.02
ACGTcount: A:0.20, C:0.21, G:0.17, T:0.42
Consensus pattern (141 bp):
AACTGTATTGGCGTTAGGCCTGGTCAAACTCTTTTTCACCTTGTTTGACTGTATTGGCATTAGAC
CTGGTTAAACTCTCTCTTTCACTCTCGTTTGACTGTATTGGCATTAAGACCTAGGTCAAACTCTT
TTCTCTCATTT
Found at i:2789146 original size:94 final size:92
Alignment explanation
Indices: 2788984--2789716 Score: 477
Period size: 95 Copynumber: 7.9 Consensus size: 92
2788974 TTTTCTCTCA
* * * * * ** *
2788984 TTTAACTGTATTAGCGTT-AGGCTTGGTCAAACTCTTTTTCACCTTGTTTGACTATATTGGCATT
1 TTTAACTGTATTGGCATTAAGACCTGGTCAAACTC-TTTTC-TCTCATTTGACTGTATTGGCATT
* * *
2789048 AGACCTAGTTAAACTCTCTCTTTCACTCTCG
64 AGACCTGGTCAAA--CTCTCTTTCACTCTTG
* *
2789079 TTTAACGGTATTGGCATTAAGACCTAGG-CAAACTCTTTTCTCTCATTTGACTGTATTGGCGTTA
1 TTTAACTGTATTGGCATTAAGACCT-GGTCAAACTCTTTTCTCTCATTTGACTGTATTGGCATTA
* *
2789143 GACCTGGTCAAACTTTTTTTTCA-TCTTG
65 GACCTGGTCAAAC-TCTCTTTCACTCTTG
* * * * * * * ***
2789171 TTTGACTGTATTGGCGTTAGGACCTGGTTAAACTTTCTTTCACTCTCGTTTGGCTGTATTGATGT
1 TTTAACTGTATTGGCATTAAGACCTGGTCAAAC--TCTTT-TCTCTCATTTGACTGTATTGGCAT
*
2789236 TAGACTTGGTCAAACTCTCTTTCACTCTTG
63 TAGACCTGGTCAAACTCTCTTTCACTCTTG
* * * * *
2789266 TCTAGCTGTATTGGCGTTAGGACCTGGTCAAACTCTTTTCAC-CATTGTTTGACTGTATTGGCAT
1 TTTAACTGTATTGGCATTAAGACCTGGTCAAACTCTTTTCTCTCA---TTTGACTGTATTGGCAT
* *
2789330 TAGGACCTGGTTAAACTCTC-CTCAC-CTTG
63 TA-GACCTGGTCAAACTCTCTTTCACTCTTG
* ** * * * * *
2789359 TTTGACTGTATTGGTGTT-AGTCCTGGTCAAAATCTTTTCTTTCGTTTGACTGTATTGGCATTAT
1 TTTAACTGTATTGGCATTAAGACCTGGTCAAACTCTTTTCTCTCATTTGACTGTATTGGCATTAG
* *
2789423 TCTTGGTCAAACTCT-TTT--CTCTTG
66 ACCTGGTCAAACTCTCTTTCACTCTTG
* * * **
2789447 TTTAACTGTATTGGCATTAA-TCCTAGTCAAACTC-TTTCTAC-CATTGTTTGACTGTATCGGTG
1 TTTAACTGTATTGGCATTAAGACCTGGTCAAACTCTTTTCT-CTCA---TTTGACTGTATTGGCA
*
2789509 TTAGGACCTAGTCAAACTCT-TTTCAC-CATTTG
62 TTA-GACCTGGTCAAACTCTCTTTCACTC--TTG
* * * * * * * *
2789541 TTTGACTGTATTGGCATT-AGTCCTAGTCAAAATCTTTTATCTCGTTTAACTGTATTGGCACTAG
1 TTTAACTGTATTGGCATTAAGACCTGGTCAAACTCTTTTCTCTCATTTGACTGTATTGGCATTAG
* * *
2789605 TCCTGATCAAACTCT-TTT--CTCTCG
66 ACCTGGTCAAACTCTCTTTCACTCTTG
* * * * * *
2789629 TTTGACTATATTGGCATT-AGTCCTGGTTAAACTCTTTT-TAC-CATTGTTTGACCGTATTGGCG
1 TTTAACTGTATTGGCATTAAGACCTGGTCAAACTCTTTTCT-CTCA---TTTGACTGTATTGGCA
*
2789691 TTAGGACCTGGTCAAACT-TTTTTCAC
62 TTA-GACCTGGTCAAACTCTCTTTCAC
2789717 CATTTGTGAC
Statistics
Matches: 506, Mismatches: 95, Indels: 76
0.75 0.14 0.11
Matches are distributed among these distances:
87 9 0.02
88 68 0.13
89 15 0.03
90 52 0.10
91 49 0.10
92 65 0.13
93 34 0.07
94 94 0.19
95 107 0.21
96 11 0.02
97 2 0.00
ACGTcount: A:0.20, C:0.21, G:0.17, T:0.42
Consensus pattern (92 bp):
TTTAACTGTATTGGCATTAAGACCTGGTCAAACTCTTTTCTCTCATTTGACTGTATTGGCATTAG
ACCTGGTCAAACTCTCTTTCACTCTTG
Found at i:2789588 original size:138 final size:134
Alignment explanation
Indices: 2789124--2789713 Score: 477
Period size: 138 Copynumber: 4.3 Consensus size: 134
2789114 TTTTCTCTCA
* * * * *
2789124 TTTGACTGTATTGGCGTTAGACCTGGTCAAACTTTTTTTTCATCTTGTTTGACTGTATTGGCGTT
1 TTTGACTGTATTGGCATTAGTCCTGGTCAAAC--TCTTTT-ATCTTGTTTAACTGTATTGGCATT
* * * * * *
2789189 AGGA-CCTGGTTAAACTTTCTTTC-ACTCTCGTTTGGCTGTATTGATGTTAGACTTGGTCAAACT
63 A--ATCCT-GTCAAAC--TCTTTCTAC-CTTGTTTGACTGTATTGGTGTTAGTCCTGGTCAAACT
2789252 CTCTTT--CACTCTTG
122 CT-TTTACCA-T-TTG
* * * * *
2789266 TCT-AGCTGTATTGGCGTTAGGACCTGGTCAAACTCTTTTCACCATTGTTTGACTGTATTGGCAT
1 TTTGA-CTGTATTGGCATTA-GTCCTGGTCAAACTCTTTT-ATC-TTGTTTAACTGTATTGGCAT
* * *
2789330 TAGGA-CCTGGTTAAACTC-TCCTCACCTTGTTTGACTGTATTGGTGTTAGTCCTGGTCAAAATC
62 TA--ATCCT-GTCAAACTCTTTCT-ACCTTGTTTGACTGTATTGGTGTTAGTCCTGGTCAAACTC
2789393 TTTT--C-TTTCG
123 TTTTACCATTT-G
* * *
2789403 TTTGACTGTATTGGCATTATTCTTGGTCAAACTCTTTTCTCTTGTTTAACTGTATTGGCATTAAT
1 TTTGACTGTATTGGCATTAGTCCTGGTCAAACTCTTTTATCTTGTTTAACTGTATTGGCATTAAT
* * *
2789468 CCTAGTCAAACTCTTTCTACCATTGTTTGACTGTATCGGTGTTAGGACCTAGTCAAACTCTTTTC
66 CCT-GTCAAACTCTTTCTACC-TTGTTTGACTGTATTGGTGTTA-GTCCTGGTCAAACTCTTTT-
2789533 ACCATTTG
127 ACCATTTG
* * * * *
2789541 TTTGACTGTATTGGCATTAGTCCTAGTCAAAATCTTTTATCTCGTTTAACTGTATTGGCACTAGT
1 TTTGACTGTATTGGCATTAGTCCTGGTCAAACTCTTTTATCTTGTTTAACTGTATTGGCATTAAT
* * ** *
2789606 CCTGATCAAACTCTTT-T-CTCTCGTTTGACTATATTGGCATTAGTCCTGGTTAAACTCTTTTTA
66 CCTG-TCAAACTCTTTCTAC-CTTGTTTGACTGTATTGGTGTTAGTCCTGGTCAAACTC-TTTTA
2789669 CCA-TTG
128 CCATTTG
* * * *
2789675 TTTGACCGTATTGGCGTTAGGACCTGGTCAAACTTTTTT
1 TTTGACTGTATTGGCATTA-GTCCTGGTCAAACTCTTTT
2789714 CACCATTTGT
Statistics
Matches: 381, Mismatches: 48, Indels: 45
0.80 0.10 0.09
Matches are distributed among these distances:
132 1 0.00
133 14 0.04
134 65 0.17
135 48 0.13
136 40 0.10
137 20 0.05
138 74 0.19
139 9 0.02
140 35 0.09
141 11 0.03
142 51 0.13
143 13 0.03
ACGTcount: A:0.19, C:0.20, G:0.18, T:0.43
Consensus pattern (134 bp):
TTTGACTGTATTGGCATTAGTCCTGGTCAAACTCTTTTATCTTGTTTAACTGTATTGGCATTAAT
CCTGTCAAACTCTTTCTACCTTGTTTGACTGTATTGGTGTTAGTCCTGGTCAAACTCTTTTACCA
TTTG
Found at i:2789596 original size:182 final size:182
Alignment explanation
Indices: 2788936--2789723 Score: 713
Period size: 182 Copynumber: 4.3 Consensus size: 182
2788926 TCTTTCATTC
** * * * * *
2788936 TTGTTTGACTGTATTGGCGTTAGGACCTAATCAAGCTTTTTTCTCTCA----TTTAACTGTATTA
1 TTGTTTGACTGTATTGGCGTTAGGACCTGGTCAAACTCTTTTCAC-CATTTGTTTGACTGTATTG
* * * * * * * * * *
2788997 GCGTTAGGCTTGGTCAAACTCTTTTTCACCTTGTTTGACTATATTGGCATTAGACCTAGTTAAAC
65 GCGTTAGTCCTGGTCAAAATC-TTTT-ATCTCGTTTGACTGTATTGGCATTAGTCTTGGTCAAA-
* * *
2789062 TCTCTCTTTCACTCTCGTTTAACGGTATTGGCATTAAGACCTAGGCAAACTCTTTTCT-CTCA
127 -CTCT-TTT--CTCTCGTTTAACTGTATTGGCATTAA-TCCTAGTCAAACTC-TTTCTAC-CA
***
2789124 ---TTTGACTGTATTGGCGTTA-GACCTGGTCAAACT-TTTTTTTCATCTTGTTTGACTGTATTG
1 TTGTTTGACTGTATTGGCGTTAGGACCTGGTCAAACTCTTTTCACCAT-TTGTTTGACTGTATTG
* * * * * *** *
2789184 GCGTTAGGACCTGGTTAAACTTTCTTTCACTCTCGTTTGGCTGTATTGATGTTAGACTTGGTCAA
65 GCGTTA-GTCCTGGTCAAA--ATCTTTTA-TCTCGTTTGACTGTATTGGCATTAGTCTTGGTCAA
* * * * *
2789249 ACTCTCTTTCACTCTTGTCTAGCTGTATTGGCGTTAGGA-CCTGGTCAAACTCTTT-TCACCA
126 ACTCT-TTT--CTCTCGTTTAACTGTATTGGCATTA--ATCCTAGTCAAACTCTTTCT-ACCA
* * **
2789310 TTGTTTGACTGTATTGGCATTAGGACCTGGTTAAACTCTCCTCACC--TTGTTTGACTGTATTGG
1 TTGTTTGACTGTATTGGCGTTAGGACCTGGTCAAACTCTTTTCACCATTTGTTTGACTGTATTGG
* * * *
2789373 TGTTAGTCCTGGTCAAAATCTTTTCTTTCGTTTGACTGTATTGGCATTATTCTTGGTCAAACTCT
66 CGTTAGTCCTGGTCAAAATCTTTTATCTCGTTTGACTGTATTGGCATTAGTCTTGGTCAAACTCT
*
2789438 TTTCTCTTGTTTAACTGTATTGGCATTAATCCTAGTCAAACTCTTTCTACCA
131 TTTCTCTCGTTTAACTGTATTGGCATTAATCCTAGTCAAACTCTTTCTACCA
* * *
2789490 TTGTTTGACTGTATCGGTGTTAGGACCTAGTCAAACTCTTTTCACCATTTGTTTGACTGTATTGG
1 TTGTTTGACTGTATTGGCGTTAGGACCTGGTCAAACTCTTTTCACCATTTGTTTGACTGTATTGG
* * * * * *
2789555 CATTAGTCCTAGTCAAAATCTTTTATCTCGTTTAACTGTATTGGCACTAGTCCTGATCAAACTCT
66 CGTTAGTCCTGGTCAAAATCTTTTATCTCGTTTGACTGTATTGGCATTAGTCTTGGTCAAACTCT
* * * * * *
2789620 TTTCTCTCGTTTGACTATATTGGCATTAGTCCTGGTTAAACTCTTTTTACCA
131 TTTCTCTCGTTTAACTGTATTGGCATTAATCCTAGTCAAACTCTTTCTACCA
* *
2789672 TTGTTTGACCGTATTGGCGTTAGGACCTGGTCAAACTTTTTTCACCATTTGT
1 TTGTTTGACTGTATTGGCGTTAGGACCTGGTCAAACTCTTTTCACCATTTGT
2789724 GACCTGGTCA
Statistics
Matches: 496, Mismatches: 82, Indels: 50
0.79 0.13 0.08
Matches are distributed among these distances:
179 1 0.00
180 58 0.12
181 23 0.05
182 166 0.33
183 8 0.02
184 44 0.09
185 25 0.05
186 5 0.01
187 69 0.14
188 31 0.06
189 48 0.10
190 15 0.03
191 3 0.01
ACGTcount: A:0.20, C:0.20, G:0.17, T:0.42
Consensus pattern (182 bp):
TTGTTTGACTGTATTGGCGTTAGGACCTGGTCAAACTCTTTTCACCATTTGTTTGACTGTATTGG
CGTTAGTCCTGGTCAAAATCTTTTATCTCGTTTGACTGTATTGGCATTAGTCTTGGTCAAACTCT
TTTCTCTCGTTTAACTGTATTGGCATTAATCCTAGTCAAACTCTTTCTACCA
Found at i:2789720 original size:47 final size:45
Alignment explanation
Indices: 2788852--2789717 Score: 595
Period size: 47 Copynumber: 18.8 Consensus size: 45
2788842 CGTTGAACTA
* * *
2788852 TATTGGTGTTAGACCTAGTCAAACTTTTTTTTACCTTGTTTGACTG
1 TATTGGCGTTAGACCTGGTCAAAC-TTTTTTCACCTTGTTTGACTG
* * * *
2788898 TATTAGCGTTAGACATGGCCAAACTCTCTCTTTCATTCTTGTTTGACTG
1 TATTGGCGTTAGACCTGGTCAAACT-T-T-TTTCA-CCTTGTTTGACTG
** * * ** *
2788947 TATTGGCGTTAGGACCTAATCAAGCTTTTTTC-TCTCATTTAACTG
1 TATTGGCGTTA-GACCTGGTCAAACTTTTTTCACCTTGTTTGACTG
* * * *
2788992 TATTAGCGTTAGGCTTGGTCAAACTCTTTTTCACCTTGTTTGACTA
1 TATTGGCGTTAGACCTGGTCAAACT-TTTTTCACCTTGTTTGACTG
* * * * * *
2789038 TATTGGCATTAGACCTAGTTAAACTCTCTCTTTCACTCTCGTTTAACGG
1 TATTGGCGTTAGACCTGGTCAAACT-T-T-TTTCAC-CTTGTTTGACTG
* * * **
2789087 TATTGGCATTAAGACCTAGG-CAAACTCTTTTC-TCTCATTTGACTG
1 TATTGGCGTT-AGACCT-GGTCAAACTTTTTTCACCTTGTTTGACTG
*
2789132 TATTGGCGTTAGACCTGGTCAAACTTTTTTTTCATCTTGTTTGACTG
1 TATTGGCGTTAGACCTGGTCAAAC--TTTTTTCACCTTGTTTGACTG
* * *
2789179 TATTGGCGTTAGGACCTGGTTAAACTTTCTTTCACTCTCGTTTGGCTG
1 TATTGGCGTTA-GACCTGGTCAAACTTT-TTTCAC-CTTGTTTGACTG
** * * *
2789227 TATTGATGTTAGACTTGGTCAAACTCTCTTTCACTCTTGTCT-AGCTG
1 TATTGGCGTTAGACCTGGTCAAACT-TTTTTCAC-CTTGTTTGA-CTG
*
2789274 TATTGGCGTTAGGACCTGGTCAAACTCTTTTCACCATTGTTTGACTG
1 TATTGGCGTTA-GACCTGGTCAAACTTTTTTCACC-TTGTTTGACTG
* * * **
2789321 TATTGGCATTAGGACCTGGTTAAACTCTCCTCACCTTGTTTGACTG
1 TATTGGCGTTA-GACCTGGTCAAACTTTTTTCACCTTGTTTGACTG
* * * * *
2789367 TATTGGTGTTAGTCCTGGTCAAAATCTTTT--CTTTCGTTTGACTG
1 TATTGGCGTTAGACCTGGTCAAACTTTTTTCACCTT-GTTTGACTG
* ** * * * *
2789411 TATTGGCATTATTCTTGGTCAAACTCTTTTC-TCTTGTTTAACTG
1 TATTGGCGTTAGACCTGGTCAAACTTTTTTCACCTTGTTTGACTG
* * *
2789455 TATTGGCATTA-ATCCTAGTCAAAC-TCTTTCTACCATTGTTTGACTG
1 TATTGGCGTTAGA-CCTGGTCAAACTTTTTTC-ACC-TTGTTTGACTG
* * * *
2789501 TATCGGTGTTAGGACCTAGTCAAACTCTTTTCACCATTTGTTTGACTG
1 TATTGGCGTTA-GACCTGGTCAAACTTTTTTCACC--TTGTTTGACTG
* * * * * * * *
2789549 TATTGGCATTAGTCCTAGTCAAAATCTTTT-ATCTCGTTTAACTG
1 TATTGGCGTTAGACCTGGTCAAACTTTTTTCACCTTGTTTGACTG
** * * * * * *
2789593 TATTGGCACTAGTCCTGATCAAACTCTTTTC-TCTCGTTTGACTA
1 TATTGGCGTTAGACCTGGTCAAACTTTTTTCACCTTGTTTGACTG
* * * *
2789637 TATTGGCATTAGTCCTGGTTAAACTCTTTTT-ACCATTGTTTGACCG
1 TATTGGCGTTAGACCTGGTCAAACT-TTTTTCACC-TTGTTTGACTG
2789683 TATTGGCGTTAGGACCTGGTCAAACTTTTTTCACC
1 TATTGGCGTTA-GACCTGGTCAAACTTTTTTCACC
2789718 ATTTGTGACC
Statistics
Matches: 656, Mismatches: 124, Indels: 79
0.76 0.14 0.09
Matches are distributed among these distances:
43 9 0.01
44 150 0.23
45 67 0.10
46 122 0.19
47 164 0.25
48 82 0.12
49 41 0.06
50 20 0.03
51 1 0.00
ACGTcount: A:0.20, C:0.21, G:0.17, T:0.42
Consensus pattern (45 bp):
TATTGGCGTTAGACCTGGTCAAACTTTTTTCACCTTGTTTGACTG
Found at i:2789737 original size:29 final size:29
Alignment explanation
Indices: 2789695--2789752 Score: 116
Period size: 29 Copynumber: 2.0 Consensus size: 29
2789685 TTGGCGTTAG
2789695 GACCTGGTCAAACTTTTTTCACCATTTGT
1 GACCTGGTCAAACTTTTTTCACCATTTGT
2789724 GACCTGGTCAAACTTTTTTCACCATTTGT
1 GACCTGGTCAAACTTTTTTCACCATTTGT
2789753 TTAACTATAT
Statistics
Matches: 29, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
29 29 1.00
ACGTcount: A:0.21, C:0.24, G:0.14, T:0.41
Consensus pattern (29 bp):
GACCTGGTCAAACTTTTTTCACCATTTGT
Found at i:2789776 original size:77 final size:76
Alignment explanation
Indices: 2789650--2789797 Score: 183
Period size: 77 Copynumber: 1.9 Consensus size: 76
2789640 TGGCATTAGT
* * * * * *
2789650 CCTGGTTAAACTCTTTTTACCATTGTTTGACCGTATTGGCGTTAGGACCTGGTCAAACTTTTTTC
1 CCTGGTCAAACTCTTTTTACCATTGTTTAACCATATTGGCGTTAAGACCTAGTCAAACTCTTTTC
2789715 ACCATTTGTGA
66 ACCATTTGTGA
* *
2789726 CCTGGTCAAACT-TTTTTCACCATTTGTTTAACTATATTGG-GATTAAGACCTAGTTAAACTCTT
1 CCTGGTCAAACTCTTTTT-ACCA-TTGTTTAACCATATTGGCG-TTAAGACCTAGTCAAACTCTT
2789789 TTCACCATT
63 TTCACCATT
2789798 GTTTAACTGT
Statistics
Matches: 61, Mismatches: 8, Indels: 5
0.82 0.11 0.07
Matches are distributed among these distances:
75 5 0.08
76 16 0.26
77 40 0.66
ACGTcount: A:0.23, C:0.21, G:0.15, T:0.41
Consensus pattern (76 bp):
CCTGGTCAAACTCTTTTTACCATTGTTTAACCATATTGGCGTTAAGACCTAGTCAAACTCTTTTC
ACCATTTGTGA
Done.