Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold524
Parameters: 2 7 7 80 10 50 1000
Length:  35228

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4241--4266
13
2.0
13
100
0
52
38
15
15
30
1.88
4223--4286
32
2.0
33
90
3
103
42
15
14
28
1.86
9649--9680
8
4.0
8
100
0
64
12
0
25
62
1.30
9882--9920
13
3.0
13
92
0
60
33
17
12
35
1.88
10040--10084
21
2.2
20
84
11
56
31
20
4
44
1.71
12495--12520
13
2.0
13
100
0
52
38
15
15
30
1.88
12477--12540
32
2.0
33
87
3
94
42
14
14
29
1.84
13868--13998
70
1.9
70
85
3
183
32
22
11
33
1.90
16929--16960
16
2.0
16
93
0
55
34
6
18
40
1.76
17079--17132
27
2.0
27
92
0
90
38
14
24
22
1.91
17688--17739
20
2.7
20
90
3
79
38
21
11
28
1.88
18732--18771
6
6.5
6
86
13
55
52
0
47
0
1.00
18732--18771
19
2.2
20
86
13
59
52
0
47
0
1.00
18807--18846
20
2.0
21
90
5
64
32
5
0
62
1.17
18835--18886
22
2.4
22
90
3
88
40
0
0
59
0.97
19350--19400
16
3.2
15
80
20
59
56
0
0
43
0.99
19371--19417
6
8.3
6
77
13
55
51
0
0
48
1.00
19371--19417
11
4.2
11
78
10
51
51
0
0
48
1.00
19359--19431
32
2.3
32
85
4
94
54
0
1
43
1.08
19359--19416
17
3.5
17
83
6
75
55
0
0
44
0.99
19362--19419
16
3.6
16
79
9
64
53
0
0
46
1.00
23635--23677
17
2.4
18
73
7
52
41
0
0
58
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23657--23730
28
2.5
28
72
14
69
52
1
1
44
1.17
25232--25274
21
2.0
21
82
8
52
27
0
2
69
1.00
26054--26137
43
2.0
43
95
0
150
32
15
15
36
1.89
33528--33562
17
2.1
17
88
0
52
77
5
8
8
1.13

Tables:   1

The End!