Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold526
Parameters: 2 7 7 80 10 50 1000
Length:  9920

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
972--1009
7
4.9
8
90
9
53
0
89
7
2
0.57
3107--3173
33
2.0
33
88
0
98
32
11
14
40
1.83
3127--3151
13
1.9
13
100
0
50
36
16
16
32
1.90
3214--3238
13
1.9
13
100
0
50
32
16
16
36
1.90
3247--3375
52
2.5
52
91
2
197
35
17
16
30
1.92
6741--6814
19
3.7
19
74
13
67
29
2
0
67
1.04
6752--6814
22
3.0
21
79
9
74
26
3
0
69
1.03
6752--6814
20
3.0
20
75
13
65
26
3
0
69
1.03
7008--7057
24
2.1
23
85
3
64
48
0
0
52
1.00
7235--7307
26
2.8
27
80
17
75
47
0
1
50
1.09
7244--7294
22
2.4
21
81
15
61
47
0
0
52
1.00
8768--8822
7
7.9
7
73
15
51
65
0
0
34
0.93
8740--8818
35
2.2
35
80
13
90
62
1
1
35
1.12
8798--8869
28
2.6
27
79
12
76
56
4
4
34
1.37
9088--9142
13
4.1
13
77
13
58
45
0
0
54
0.99

Tables:   1

The End!