Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold531
Parameters: 2 7 7 80 10 50 1000
Length:  38107

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142--175
17
1.9
18
94
5
61
50
5
2
41
1.42
437--509
1
73.0
1
86
0
101
0
4
2
93
0.43
431--529
7
12.9
8
84
6
84
0
10
3
86
0.66
628--668
20
2.0
21
90
9
66
70
0
0
29
0.87
752--894
11
12.3
11
65
19
51
62
2
2
32
1.21
808--909
34
2.9
35
75
15
86
63
2
0
33
1.09
911--957
21
2.3
21
88
3
69
0
19
0
80
0.70
910--957
25
1.9
25
87
8
71
0
18
0
81
0.70
912--967
25
2.3
24
81
3
67
0
21
1
76
0.87
3112--3142
13
2.4
13
100
0
62
54
0
0
45
0.99
3562--3605
6
7.3
6
89
0
52
52
2
34
11
1.50
3568--3605
12
3.2
12
92
0
58
55
2
34
7
1.43
4294--4340
2
24.0
2
95
4
87
48
0
51
0
1.00
5072--5096
4
6.2
4
100
0
50
72
0
0
28
0.86
9323--9357
2
17.5
2
93
0
61
48
0
2
48
1.16
11547--11589
2
22.0
2
95
4
79
48
0
0
51
1.00
12720--12760
2
20.5
2
100
0
82
51
0
48
0
1.00
18879--18935
3
19.3
3
85
3
71
31
1
5
61
1.28
19313--19351
2
19.5
2
100
0
78
48
0
0
51
1.00
19492--19522
2
15.5
2
93
0
53
51
0
3
45
1.17
20156--20187
2
16.0
2
100
0
64
50
0
0
50
1.00
33524--33549
2
13.0
2
100
0
52
0
50
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36356--36393
2
19.0
2
100
0
76
50
0
0
50
1.00
37007--37050
3
14.3
3
86
13
63
68
0
0
31
0.90

Tables:   1

The End!