Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold535
Parameters: 2 7 7 80 10 50 1000
Length:  24228

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
482--567
27
3.2
28
76
12
85
44
0
0
55
0.99
1300--1352
24
2.2
24
79
0
61
47
1
0
50
1.12
1770--1869
32
3.2
32
84
8
100
51
5
4
40
1.43
1782--1889
32
3.4
32
82
11
125
53
3
1
40
1.29
1915--1972
30
2.0
29
82
3
71
41
0
5
53
1.23
1984--2027
21
2.1
21
83
8
54
34
4
0
61
1.16
2072--2123
26
2.0
25
82
10
61
59
1
1
36
1.19
2492--2576
21
4.0
21
63
18
50
44
1
5
48
1.34
3570--3600
13
2.4
13
94
0
53
54
0
3
41
1.16
4466--4528
26
2.4
26
86
7
83
39
3
0
57
1.15
4842--4932
47
1.9
47
88
4
139
34
7
21
36
1.82
7386--7460
22
3.3
21
74
10
60
48
1
0
50
1.09
8522--8584
24
2.8
22
72
11
65
42
0
0
57
0.99
8656--8708
23
2.3
23
90
6
81
64
0
0
35
0.94
8692--8785
41
2.3
40
77
18
95
54
3
1
41
1.23
8725--8804
41
2.0
41
80
14
94
56
1
1
41
1.15
9215--9251
19
1.9
19
89
10
58
43
0
0
56
0.99
9335--9369
17
2.1
17
88
0
52
65
0
0
34
0.93
9327--9405
25
3.0
25
70
17
63
60
1
1
36
1.13
9792--9827
16
2.2
16
90
0
54
50
5
0
44
1.25
10355--10447
37
2.5
37
84
7
107
54
2
1
41
1.19
10401--10443
15
2.8
16
78
3
52
60
4
0
34
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10422--10464
23
2.0
23
90
9
72
58
2
0
39
1.11
10505--10555
12
4.5
11
73
11
50
43
3
0
52
1.19
10536--10600
19
3.4
19
68
10
51
38
0
0
61
0.96
10537--10602
31
2.1
31
83
10
82
40
0
0
59
0.98
10686--10717
16
2.0
16
93
0
55
53
0
3
43
1.16
10671--10726
20
3.0
20
73
24
59
57
0
1
41
1.09
14620--14644
1
25.0
1
100
0
50
0
100
0
0
0.00
15919--15952
2
17.0
2
100
0
68
0
50
0
50
1.00
17866--17967
22
4.5
22
82
12
86
40
0
0
59
0.97
17926--17964
3
13.3
3
94
5
71
35
0
0
64
0.94
17928--17962
17
2.1
17
100
0
70
34
0
0
65
0.93
17926--17964
20
2.0
20
100
0
78
35
0
0
64
0.94
18128--18162
15
2.4
14
90
4
52
48
2
5
42
1.41
22939--23051
27
4.1
26
72
18
79
42
0
0
56
1.05
22941--23054
18
6.3
17
67
22
54
42
0
0
56
1.05

Tables:   1

The End!