Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold537
Parameters: 2 7 7 80 10 50 1000
Length:  76715

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1503--1570
2
34.5
2
85
2
93
48
4
1
45
1.31
3079--3377
156
1.9
156
79
5
336
42
15
12
28
1.84
7601--7648
24
2.0
24
87
0
69
35
10
25
29
1.89
8095--8124
2
15.0
2
100
0
60
50
0
0
50
1.00
8705--8741
2
18.5
2
100
0
74
48
0
0
51
1.00
11260--11305
2
23.5
2
95
4
85
47
0
0
52
1.00
13361--13389
2
14.5
2
100
0
58
51
0
0
48
1.00
14097--14144
24
2.0
24
87
0
69
37
10
20
31
1.87
15321--15345
2
12.5
2
100
0
50
48
0
0
52
1.00
17995--18027
2
17.0
2
93
6
59
48
0
0
51
1.00
18378--18424
16
3.0
16
79
17
62
55
8
0
36
1.31
18372--18423
15
3.5
14
82
17
61
55
7
0
36
1.29
18357--18424
31
2.3
29
87
5
91
60
5
0
33
1.21
18520--18550
2
15.5
2
100
0
62
48
0
0
51
1.00
25151--25346
34
5.7
34
95
0
338
40
37
0
22
1.54
25159--25258
25
4.3
25
62
29
67
41
37
0
22
1.54
30054--30256
34
5.9
34
94
0
343
40
35
0
23
1.55
30096--30197
22
4.4
25
64
26
62
40
36
0
23
1.55
38201--38271
27
2.6
27
86
6
90
46
22
7
23
1.76
40153--40198
21
2.1
22
84
4
58
19
30
19
30
1.97
43946--43984
20
1.9
20
85
15
53
41
0
0
58
0.98
44299--44432
20
6.5
20
69
19
73
38
0
0
59
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44300--44431
9
14.8
9
70
19
89
37
0
0
60
1.08
44313--44437
45
2.9
44
79
14
143
39
0
0
59
1.09
44308--44431
25
5.1
25
73
20
104
37
0
0
61
1.08
44263--44431
49
3.3
53
72
20
153
36
0
1
60
1.11
44515--44549
18
1.9
18
88
0
52
20
2
20
57
1.54
44770--44832
28
2.2
28
97
0
117
49
0
1
49
1.10
45485--45532
25
2.0
25
84
8
64
37
0
2
60
1.09
45963--46015
14
3.5
14
76
23
54
83
0
16
0
0.66
45963--45996
13
2.6
13
85
0
50
85
0
14
0
0.60
46037--46081
19
2.6
17
83
16
58
40
0
0
60
0.97
47733--47777
17
2.5
18
85
7
56
46
0
0
53
1.00
47915--47969
28
2.0
29
82
7
69
52
1
0
45
1.11
52040--52349
48
6.6
48
86
4
416
35
17
25
20
1.95
52040--52349
95
3.3
94
88
3
428
35
17
25
20
1.95
52037--52355
143
2.3
140
88
3
478
35
17
25
21
1.95
52420--53428
32
33.1
28
79
9
305
22
19
28
29
1.98
52420--52894
56
8.1
55
77
10
288
23
19
28
28
1.98
52443--52609
84
2.0
84
83
4
212
23
20
27
28
1.99
52596--53440
32
27.2
32
83
4
932
21
19
28
30
1.98
64238--64273
2
18.0
2
94
0
63
52
0
0
47
1.00
66631--66664
18
1.9
17
88
5
50
58
0
0
41
0.98
67847--67894
24
2.0
25
83
4
62
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67856--67912
12
4.9
11
77
16
53
52
0
0
47
1.00
67901--67979
29
2.7
29
75
11
81
55
0
1
43
1.07
69179--69223
22
2.0
22
87
8
65
64
0
0
35
0.94
69831--69857
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!