Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold544
Parameters: 2 7 7 80 10 50 1000
Length:  18176

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2811--2843
15
2.1
16
94
5
59
75
6
0
18
1.00
6172--6216
8
5.2
8
82
12
54
46
0
0
53
1.00
6172--6216
17
2.6
17
83
16
58
46
0
0
53
1.00
6931--6968
2
19.0
2
94
0
67
52
0
0
47
1.00
12888--12913
13
2.0
13
100
0
52
69
0
0
30
0.89
13284--13324
13
3.2
13
86
6
57
41
0
0
58
0.98
13294--13327
4
8.2
4
96
3
59
47
0
0
52
1.00
13573--13635
29
2.3
28
78
8
67
42
1
1
53
1.19
13797--13829
6
5.5
6
100
0
66
18
0
0
81
0.68
13801--13864
3
20.7
3
77
6
65
28
1
0
70
0.97
14194--14232
12
3.2
12
88
3
51
25
0
2
71
0.98
14189--14234
20
2.2
21
88
11
69
23
0
2
73
0.94
14207--14245
20
2.0
19
85
5
51
33
0
0
66
0.92
14245--14283
20
2.0
20
94
0
69
48
2
0
48
1.15
14713--14809
49
2.0
48
82
9
117
46
0
0
53
1.00
15578--15604
9
3.0
9
100
0
54
77
0
0
22
0.76
15689--15734
15
3.1
15
84
12
60
60
0
0
39
0.97
16191--16234
18
2.4
18
81
11
54
45
0
2
52
1.13
16300--16366
14
5.1
14
74
15
54
53
1
1
43
1.19
16481--16523
21
2.0
21
86
0
59
44
0
13
41
1.44
16777--16823
22
2.1
22
84
0
58
59
0
0
40
0.97

Tables:   1

The End!