Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold545
Parameters: 2 7 7 80 10 50 1000
Length:  30665

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20--1034
32
31.6
31
93
4
1566
31
34
18
14
1.92
1570--1644
20
3.8
20
78
0
87
34
13
12
40
1.81
1570--1647
40
2.0
39
87
2
111
34
12
12
39
1.82
2555--2611
23
2.5
23
100
0
114
17
10
8
63
1.51
2563--2618
23
2.6
21
86
8
51
19
8
8
62
1.51
9444--9472
14
2.1
14
100
0
58
41
0
0
58
0.98
10286--10355
29
2.5
28
78
19
74
22
1
4
71
1.12
17227--17258
2
16.0
2
93
0
55
53
0
0
46
1.00
19727--19793
31
2.2
31
97
2
127
26
7
17
47
1.74
23824--23865
15
2.7
16
81
7
50
23
4
19
52
1.65
30173--30220
17
2.7
18
77
9
53
47
0
0
52
1.00
30286--30324
15
2.6
15
80
12
53
43
0
0
56
0.99

Tables:   1

The End!