Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold548
Parameters: 2 7 7 80 10 50 1000
Length:  31065

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
113--141
14
2.1
14
93
6
51
13
3
6
75
1.13
1648--1678
2
15.5
2
100
0
62
48
0
0
51
1.00
2170--2220
20
2.6
20
73
20
54
43
0
0
56
0.99
6311--6344
2
17.5
2
93
6
61
50
0
0
50
1.00
15835--15864
15
2.0
15
93
0
51
63
6
10
20
1.47
16774--16807
16
2.1
16
88
0
50
26
0
0
73
0.83
17069--17278
50
4.2
50
90
4
334
30
19
20
30
1.97
21645--21902
50
5.2
50
91
3
403
31
18
19
30
1.96
23249--23301
26
2.1
24
86
6
70
49
0
0
50
1.00
24983--25012
15
2.1
14
93
6
51
26
3
0
70
1.03
25106--25142
14
2.8
14
92
8
60
45
5
0
48
1.25
25222--25272
13
3.9
14
80
10
54
58
1
5
33
1.33
29236--29274
21
1.9
21
89
5
62
58
0
0
41
0.98

Tables:   1

The End!