Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold564
Parameters: 2 7 7 80 10 50 1000
Length:  34502

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11460--11567
58
1.9
56
81
7
128
30
11
12
46
1.76
12849--12904
29
1.9
29
85
0
76
35
3
3
57
1.34
14959--14998
21
1.9
21
84
0
53
65
2
5
27
1.27
14960--15028
26
2.7
25
80
6
75
63
1
2
31
1.18
14981--15028
20
2.4
19
76
13
51
62
0
2
35
1.07
15307--15350
16
2.8
15
83
10
61
31
0
0
68
0.90
15360--15438
9
8.6
9
75
19
56
32
0
2
64
1.07
15359--15409
24
2.1
25
85
3
68
35
0
0
64
0.94
15799--15846
20
2.5
20
75
3
53
45
0
2
52
1.12
19636--19700
21
3.0
21
86
2
94
49
9
12
29
1.71
19796--19872
35
2.2
35
97
0
145
51
6
7
33
1.56
20253--20325
21
3.4
21
76
14
76
26
8
27
38
1.84
20286--20331
21
2.2
21
88
0
65
21
15
23
39
1.92
21481--21565
42
2.0
43
86
6
120
55
12
1
30
1.45
22586--22637
15
3.4
15
79
12
61
48
0
5
46
1.26
23527--23576
19
2.5
20
87
12
61
56
0
0
44
0.99
23534--23587
19
2.7
20
86
13
76
55
1
0
42
1.10
23860--23966
8
13.0
8
68
19
51
43
0
0
54
1.13
23928--23962
17
1.9
17
88
11
52
37
2
0
60
1.12
23849--23973
40
3.2
40
74
18
95
43
0
0
55
1.11
23927--23978
12
4.2
12
82
9
61
32
1
0
65
1.04
25147--25194
24
2.0
23
88
4
69
66
2
6
25
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25147--25204
25
2.4
24
82
5
64
63
3
6
25
1.35
25939--25987
19
2.4
21
80
10
57
44
0
0
55
0.99
33681--33711
2
16.0
2
93
6
55
48
0
0
51
1.00

Tables:   1

The End!