Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold566
Parameters: 2 7 7 80 10 50 1000
Length:  21524

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2469--3552
27
39.7
27
81
10
1063
21
34
14
29
1.93
2469--3552
55
19.9
53
78
12
954
21
34
14
29
1.93
3538--3981
32
13.8
32
93
1
710
31
33
18
16
1.93
5222--5257
17
2.1
17
89
0
54
83
0
16
0
0.65
8172--8246
20
3.8
20
80
3
80
40
12
13
34
1.81
8169--8246
40
2.0
39
87
2
111
39
12
12
34
1.82
8899--8941
15
2.9
15
85
0
59
58
0
0
41
0.98
11297--11342
13
3.7
12
82
5
56
43
2
0
54
1.12
11309--11372
29
2.1
31
91
8
105
45
0
1
53
1.10
11309--11395
27
3.0
30
79
14
103
47
0
1
51
1.08
11312--11394
28
3.0
27
70
20
64
48
0
1
50
1.08
11485--11567
11
7.8
11
72
15
59
45
2
2
49
1.28
11519--11567
21
2.3
21
85
0
71
46
2
2
48
1.25
11760--11793
17
2.0
17
100
0
68
47
11
11
29
1.76
12017--12048
6
4.9
7
88
11
50
0
9
0
90
0.45
12017--12047
13
2.5
13
94
5
55
0
9
0
90
0.46
13120--13175
28
2.0
28
100
0
112
35
17
25
21
1.95
14196--14229
13
2.6
14
86
13
54
44
0
0
55
0.99
17267--17346
27
3.1
27
75
21
66
56
0
2
41
1.13
18740--18811
22
3.4
22
76
23
75
37
0
0
62
0.95

Tables:   1

The End!