Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold569
Parameters: 2 7 7 80 10 50 1000
Length:  23709

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131--214
22
3.9
21
73
13
73
50
1
1
47
1.16
133--165
17
2.0
17
88
5
50
54
0
0
45
0.99
128--191
27
2.4
27
87
7
87
51
0
1
46
1.10
131--191
21
2.9
21
82
2
59
50
0
1
47
1.10
253--319
20
3.3
20
81
8
75
40
0
0
59
0.97
280--333
17
2.9
18
83
8
65
42
1
0
55
1.10
260--335
19
4.0
20
76
15
65
42
1
0
56
1.07
2855--2887
15
2.2
15
94
0
57
24
39
6
30
1.79
4108--4179
35
2.1
35
89
0
108
27
15
11
45
1.80
7204--7229
6
4.3
6
100
0
52
46
0
0
53
1.00
7204--7238
18
1.9
18
88
0
52
48
2
0
48
1.16
10855--10918
29
2.1
29
82
8
74
43
0
4
51
1.22
11013--11060
21
2.2
22
85
3
62
47
0
0
52
1.00
11588--11627
13
3.0
13
81
3
53
55
0
0
45
0.99
11989--12055
22
3.0
21
77
14
64
56
2
0
40
1.14
12025--12066
22
1.9
22
85
9
59
61
4
0
33
1.17
12664--12723
22
2.8
20
75
20
68
53
0
0
46
1.00
12816--12880
23
3.1
22
77
16
68
35
0
0
64
0.94
12817--12879
19
3.3
18
74
20
56
34
0
0
65
0.93
13418--13475
26
2.2
25
80
14
64
62
0
0
37
0.96
15633--15665
16
2.1
16
94
5
59
30
6
0
63
1.18
18191--18222
16
2.0
16
93
0
55
40
25
25
9
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20597--20819
19
10.7
19
69
23
121
43
2
4
50
1.33
20534--20624
48
1.9
48
88
2
139
37
2
5
54
1.36
20528--20635
48
2.3
47
81
9
130
37
1
4
56
1.31
20582--20808
86
2.7
85
82
7
248
43
2
4
49
1.36
20747--20801
21
2.7
21
86
13
80
40
1
5
52
1.35
21065--21116
18
3.0
17
83
13
70
40
0
3
55
1.18
21065--21122
16
3.4
16
83
11
71
41
0
5
53
1.23
21123--21201
37
2.1
37
81
9
90
54
0
7
37
1.29
23163--23215
24
2.4
21
84
9
61
49
0
0
50
1.00
23188--23265
25
3.3
23
79
11
70
52
0
0
47
1.00

Tables:   1

The End!