Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold577
Parameters: 2 7 7 80 10 50 1000
Length:  25090

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22--57
13
2.7
13
91
4
54
30
0
0
69
0.89
24--67
22
2.0
22
82
8
54
31
0
0
68
0.90
2170--2219
16
3.1
16
77
11
57
56
0
0
44
0.99
2170--2208
17
2.4
16
86
4
51
56
0
0
43
0.99
2164--2214
26
2.0
27
84
7
70
56
0
0
43
0.99
2193--2261
37
1.9
35
82
11
86
55
0
0
44
0.99
10831--10884
22
2.5
23
85
11
78
70
5
0
24
1.08
10831--10883
21
2.5
22
87
9
74
69
5
0
24
1.09
11152--11200
24
2.0
24
100
0
98
38
12
12
36
1.80
11203--11287
24
3.4
25
73
7
66
45
0
0
54
1.00
11601--11636
12
3.1
12
88
8
56
33
0
0
66
0.92
11724--11765
21
2.0
21
100
0
84
47
0
0
52
1.00
14807--14855
23
2.1
24
85
11
66
30
4
0
65
1.11
14806--14874
25
2.7
26
74
23
65
34
2
0
62
1.10
15039--15087
24
2.1
24
84
3
64
59
0
2
38
1.09
15677--15720
2
22.0
2
90
0
61
50
6
0
43
1.29
16115--16188
30
2.5
31
78
12
82
40
2
4
52
1.34
18315--18349
17
2.1
17
88
0
52
40
37
5
17
1.73
19226--19277
16
3.3
16
81
5
61
63
15
1
19
1.40
19351--19391
21
2.0
21
85
4
57
63
0
0
36
0.95
20060--20085
13
2.0
13
100
0
52
30
0
23
46
1.53
21267--21349
39
2.4
33
75
21
87
38
10
6
44
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22196--22226
2
15.5
2
93
0
53
48
3
0
48
1.17
24071--24125
21
2.6
22
77
11
62
52
0
0
47
1.00
24272--24343
20
3.7
20
77
5
67
51
0
0
48
1.00
24813--24854
19
2.1
21
86
8
61
57
0
0
42
0.99

Tables:   1

The End!