Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold595
Parameters: 2 7 7 80 10 50 1000
Length:  27622

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58--96
12
3.1
14
75
24
50
35
0
0
64
0.94
52--133
24
3.4
24
76
17
73
34
2
2
60
1.23
4853--4926
20
3.7
20
77
0
85
35
13
12
39
1.82
4943--4996
20
2.7
20
94
0
99
40
11
12
35
1.79
12831--13597
27
28.0
27
91
2
1165
22
33
14
29
1.94
12831--13597
55
14.0
54
92
2
1165
22
33
14
29
1.94
12831--13597
328
2.3
328
91
1
1259
22
33
14
29
1.94
13580--14090
32
16.0
32
91
0
790
32
34
17
16
1.92
14644--14714
20
3.5
20
78
0
79
35
12
12
39
1.82
14735--14788
20
2.7
20
100
0
108
38
11
14
35
1.82
21595--21645
18
2.8
18
77
11
50
35
7
0
56
1.28
26222--26292
16
4.3
16
75
15
65
46
0
2
50
1.16
26281--26324
11
4.0
11
81
0
52
40
2
2
54
1.25
26215--26290
32
2.5
32
83
8
97
47
0
2
50
1.15
26739--26791
20
2.6
21
88
8
74
43
0
0
56
0.99

Tables:   1

The End!