Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold600
Parameters: 2 7 7 80 10 50 1000
Length:  30740

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2287--2327
21
2.0
21
85
9
57
39
12
9
39
1.76
2361--2437
20
3.8
20
75
10
68
41
15
14
28
1.86
2514--2544
10
3.1
10
90
0
53
22
29
6
41
1.78
2532--2587
21
2.6
22
94
5
105
26
25
10
37
1.88
2672--2697
13
2.0
13
100
0
52
30
15
23
30
1.95
4176--4242
33
2.0
33
82
5
82
37
17
8
35
1.82
4992--5065
21
3.6
21
80
7
80
44
13
14
27
1.83
7546--7598
28
2.0
26
82
14
63
30
28
13
28
1.94
7517--7905
78
5.0
78
79
4
360
29
24
11
34
1.90
7553--7872
157
2.0
156
87
5
459
29
24
11
34
1.91
9623--9665
21
2.0
21
90
0
68
37
13
9
39
1.78
9722--9762
20
2.0
20
90
0
64
34
9
12
43
1.75
12523--12553
3
10.3
3
92
0
53
32
29
0
38
1.57
13849--13900
21
2.5
21
100
0
104
59
13
5
21
1.55
14256--14313
21
2.8
21
91
0
98
36
13
10
39
1.79
16664--16708
20
2.3
20
84
3
56
53
4
6
35
1.47
17231--17525
84
3.5
84
71
9
231
33
18
29
17
1.95
17231--17530
42
7.1
42
71
6
185
34
18
30
17
1.94
18331--18357
12
2.2
12
100
0
54
92
0
7
0
0.38
18822--18935
51
2.3
50
87
6
160
29
16
9
43
1.80
26162--26344
50
3.7
49
86
3
249
28
18
12
40
1.86
26234--26325
30
3.4
29
66
27
85
26
16
14
43
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28618--29029
79
5.3
77
74
9
194
26
25
13
34
1.93
28618--29078
78
5.9
76
73
9
284
27
25
13
34
1.93

Tables:   1

The End!