Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold602
Parameters: 2 7 7 80 10 50 1000
Length:  54778

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9710--9751
2
21.0
2
100
0
84
50
0
0
50
1.00
14823--14921
45
2.2
46
92
3
175
29
14
20
36
1.91
18248--18280
15
2.1
16
88
5
50
33
0
6
60
1.21
21430--21476
15
3.1
15
84
6
67
74
0
0
25
0.82
22199--22239
16
2.4
18
80
15
52
65
2
7
24
1.30
22358--22575
110
2.0
110
99
0
427
46
9
11
32
1.73
24352--24402
18
2.6
20
81
12
70
15
7
0
76
1.00
24501--24582
37
2.4
34
79
15
89
62
8
2
26
1.37
24736--24770
2
17.5
2
100
0
70
51
0
0
48
1.00
26374--26406
15
2.2
15
100
0
66
45
18
0
36
1.49
26431--26613
91
2.0
91
100
0
366
26
12
14
47
1.78
28417--28447
16
1.9
16
93
0
53
12
9
9
67
1.41
31343--31402
19
3.0
20
79
9
70
45
13
11
30
1.79
33362--33523
82
2.0
81
97
1
306
32
26
12
27
1.93
36867--37184
162
2.0
162
91
4
518
46
9
4
38
1.58
42542--42606
22
3.0
22
65
17
55
58
1
0
40
1.07
42543--42601
15
4.0
15
70
12
59
61
1
0
37
1.07
42645--42685
18
2.4
17
87
4
55
43
2
0
53
1.13
43084--43118
2
17.5
2
100
0
70
51
0
0
48
1.00
43312--43346
18
1.9
18
100
0
70
37
11
5
45
1.64
44213--44284
35
2.1
35
100
0
144
30
22
19
27
1.98
46779--46932
79
1.9
80
87
8
226
40
25
12
21
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49182--49276
46
2.0
47
80
6
104
43
2
1
53
1.19
54626--54666
16
2.6
16
84
0
55
31
0
14
53
1.41

Tables:   1

The End!