Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold603
Parameters: 2 7 7 80 10 50 1000
Length:  64105

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4690--4756
33
2.0
33
88
0
98
34
11
13
40
1.81
4710--4734
13
1.9
13
100
0
50
36
16
16
32
1.90
4797--4821
13
1.9
13
100
0
50
32
16
16
36
1.90
4810--4945
52
2.6
53
85
5
181
32
18
16
32
1.94
4830--4945
52
2.3
51
90
1
187
33
18
17
31
1.94
18802--18895
1
94.0
1
74
0
71
86
8
3
2
0.76
18803--18895
17
5.7
16
78
7
98
86
8
3
2
0.77
18803--18895
26
3.6
25
76
15
84
86
8
3
2
0.77
18801--18882
34
2.5
33
88
4
112
85
8
3
2
0.80
20331--20594
30
9.1
28
81
7
233
32
28
17
21
1.96
20331--20594
88
3.0
86
84
6
325
32
28
17
21
1.96
20599--20893
49
6.0
49
81
10
325
25
25
16
32
1.96
20691--20783
43
2.2
43
98
0
177
26
25
17
30
1.97
20693--20761
22
3.2
22
62
25
56
26
26
17
30
1.97
20645--20836
92
2.0
95
92
4
318
26
25
16
32
1.96
20737--20890
52
2.9
53
80
6
186
24
24
16
35
1.94
21690--21756
33
2.0
33
88
0
98
34
11
13
40
1.81
21710--21734
13
1.9
13
100
0
50
36
16
16
32
1.90
21797--21821
13
1.9
13
100
0
50
32
16
16
36
1.90
21830--21953
52
2.4
52
94
1
214
35
18
17
28
1.94
26082--26108
10
2.7
10
100
0
54
0
0
22
77
0.76
32214--32238
1
25.0
1
100
0
50
0
0
0
100
0.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35812--35899
1
88.0
1
72
0
59
85
9
3
2
0.80
35812--35899
17
5.2
17
75
13
76
85
9
3
2
0.80
35822--35897
23
3.4
21
77
13
80
85
9
2
2
0.79
35812--35900
35
2.6
34
82
13
103
84
8
4
2
0.84
35832--35899
13
5.0
13
78
16
75
86
10
1
1
0.69
37341--37521
29
6.3
28
81
9
159
30
29
18
21
1.97
37514--37808
49
6.0
49
81
10
325
25
25
16
32
1.96
37606--37698
43
2.2
43
98
0
177
26
25
17
30
1.97
37608--37676
22
3.2
22
62
25
56
26
26
17
30
1.97
37560--37751
92
2.0
95
92
4
318
26
25
16
32
1.96
37652--37805
52
2.9
53
80
6
186
24
24
16
35
1.94
38600--38666
33
2.0
33
88
0
98
34
11
13
40
1.81
38620--38644
13
1.9
13
100
0
50
36
16
16
32
1.90
38707--38731
13
1.9
13
100
0
50
32
16
16
36
1.90
38740--38863
52
2.4
51
90
2
203
35
17
17
29
1.93
46665--46720
26
2.2
26
90
0
85
58
7
7
26
1.50
47275--47308
2
17.0
2
100
0
68
50
0
0
50
1.00
56669--56812
73
2.0
72
84
1
189
43
20
13
22
1.87
57160--57205
23
2.0
24
83
12
60
60
4
13
21
1.49
57325--57382
31
1.9
31
85
3
82
56
6
0
36
1.26
58902--58957
26
2.2
26
83
6
69
53
7
3
35
1.46
58921--58979
25
2.4
25
80
8
59
50
5
5
38
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58952--58998
19
2.5
19
85
0
58
38
4
10
46
1.58
59148--59198
26
2.0
26
96
0
93
41
13
23
21
1.89
60448--60504
27
2.2
27
87
6
82
33
26
3
36
1.74

Tables:   1

The End!