Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold604
Parameters: 2 7 7 80 10 50 1000
Length:  18044

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3293--3358
28
2.3
29
86
2
89
31
16
21
30
1.95
3293--3409
31
4.0
30
80
11
111
25
17
23
34
1.96
3498--3579
28
3.0
28
85
3
112
23
19
28
29
1.98
3498--3703
30
7.4
28
72
17
135
22
18
28
30
1.97
3498--3691
55
3.5
55
73
16
150
22
19
28
29
1.98
3293--3718
30
14.7
29
70
16
128
25
18
26
29
1.98
3587--3686
53
1.9
52
82
13
125
22
19
29
30
1.97
13360--13495
51
2.6
51
80
5
150
35
15
23
25
1.94
13427--13811
79
4.9
79
90
0
626
32
14
25
27
1.95
13743--14017
51
5.4
51
80
6
286
32
13
26
28
1.94
13743--14017
104
2.7
103
81
4
306
32
13
26
28
1.94
14053--14151
51
1.9
51
87
6
146
33
11
26
29
1.91
15092--15180
43
2.1
43
82
0
106
11
21
33
33
1.89
15509--15711
50
4.1
50
97
0
370
16
23
13
46
1.83
15701--15788
26
3.4
26
96
0
158
11
29
7
51
1.66
15895--15921
6
4.5
6
100
0
54
29
0
14
55
1.40
16543--17031
56
8.4
60
80
9
477
27
19
25
26
1.99
16543--17030
173
2.8
175
84
6
602
27
19
25
26
1.99

Tables:   1

The End!