Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold614
Parameters: 2 7 7 80 10 50 1000
Length:  27003

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10240--10290
20
2.5
20
87
0
75
43
9
13
33
1.77
10328--10464
52
2.7
50
84
5
170
28
15
12
43
1.83
12920--12971
27
2.0
26
84
3
68
28
28
11
30
1.92
18373--18445
36
2.0
36
84
5
94
35
4
5
54
1.42
19789--19822
7
5.0
7
92
7
61
85
0
14
0
0.60
19789--19828
13
3.2
13
92
3
64
85
0
15
0
0.61
19789--19828
19
2.1
19
95
4
71
85
0
15
0
0.61
21398--21474
28
2.8
28
82
5
95
24
16
33
24
1.96
21457--21629
52
3.3
52
76
10
181
33
11
26
28
1.91
21612--21688
27
2.9
25
77
12
66
20
19
33
25
1.96
24141--24205
34
1.9
34
87
0
94
41
16
16
24
1.89
24229--24294
19
3.8
19
73
22
72
36
15
12
36
1.84
24247--24272
13
2.0
13
100
0
52
30
15
15
38
1.88
24229--24291
32
2.0
32
93
0
108
34
15
12
36
1.86
24348--24403
21
2.7
21
94
2
96
39
19
10
30
1.86
24402--24437
19
1.9
18
94
5
63
16
2
0
80
0.83
24414--24441
14
2.0
14
100
0
56
21
7
0
71
1.09
25018--25862
55
15.3
55
83
8
916
21
21
29
27
1.99
26827--26880
15
3.4
16
89
7
83
0
12
1
85
0.69
26827--26867
14
2.9
14
88
3
55
0
12
0
87
0.53

Tables:   1

The End!